2023-11-01T16:26:00,653 Created temporary directory: /tmp/pip-build-tracker-cgvqh5ep
2023-11-01T16:26:00,654 Initialized build tracking at /tmp/pip-build-tracker-cgvqh5ep
2023-11-01T16:26:00,655 Created build tracker: /tmp/pip-build-tracker-cgvqh5ep
2023-11-01T16:26:00,655 Entered build tracker: /tmp/pip-build-tracker-cgvqh5ep
2023-11-01T16:26:00,655 Created temporary directory: /tmp/pip-wheel-n8va6ssa
2023-11-01T16:26:00,659 Created temporary directory: /tmp/pip-ephem-wheel-cache-top776oh
2023-11-01T16:26:00,683 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-11-01T16:26:00,687 2 location(s) to search for versions of pybiotk:
2023-11-01T16:26:00,687 * https://pypi.org/simple/pybiotk/
2023-11-01T16:26:00,687 * https://www.piwheels.org/simple/pybiotk/
2023-11-01T16:26:00,688 Fetching project page and analyzing links: https://pypi.org/simple/pybiotk/
2023-11-01T16:26:00,688 Getting page https://pypi.org/simple/pybiotk/
2023-11-01T16:26:00,689 Found index url https://pypi.org/simple/
2023-11-01T16:26:00,740 Fetched page https://pypi.org/simple/pybiotk/ as application/vnd.pypi.simple.v1+json
2023-11-01T16:26:00,743   Found link https://files.pythonhosted.org/packages/36/39/63bca353f534b61d1b4d184594aa908e15c1ed647e1e722bfcf9ee064dbc/pybiotk-1.0.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.3
2023-11-01T16:26:00,744   Found link https://files.pythonhosted.org/packages/c2/63/fd2b3ca946c51dc23242f873ba230b22d55298bd2eb2df0fe06a648e6849/pybiotk-1.0.4.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.4
2023-11-01T16:26:00,744   Found link https://files.pythonhosted.org/packages/67/96/a92ce5cf084e83cb215b8d8e9656d5bcfe22ae834956bd208e796b50da16/pybiotk-1.0.6.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.6
2023-11-01T16:26:00,744   Found link https://files.pythonhosted.org/packages/be/b5/ff3128b3a5181f7169f2fb8072ae82e4589c45e3c08c3964fc77b897a8cf/pybiotk-1.0.7.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.7
2023-11-01T16:26:00,745   Found link https://files.pythonhosted.org/packages/b7/60/f27ad0c199d09158de9f172415057312c69a824f3589e43787ea24925448/pybiotk-1.0.8.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.8
2023-11-01T16:26:00,745   Found link https://files.pythonhosted.org/packages/fb/74/d26be594d8fc95a6bf87a98c26341ec248f2bb6fe50fa7a78419c8a152d9/pybiotk-1.0.9.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.0.9
2023-11-01T16:26:00,745   Found link https://files.pythonhosted.org/packages/23/04/fd2a2b3b3177b01265b141db5e1cd962f2e7d435a3cafb23631c2f22076c/pybiotk-1.1.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.0
2023-11-01T16:26:00,745   Found link https://files.pythonhosted.org/packages/01/7b/9e6f646c28b48a6ef9a434a1b8169c7ec6b8ee8e5ce135c6aa60284ddb84/pybiotk-1.1.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.1.1
2023-11-01T16:26:00,746   Found link https://files.pythonhosted.org/packages/f7/2d/b38d75abba8592955a86e4d86c64229b02b37582049427c21925443b1807/pybiotk-1.2.0.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.0
2023-11-01T16:26:00,746   Found link https://files.pythonhosted.org/packages/d3/45/4f60c095cbd938d73427d73089a67014adb3f91d0b4f5b0e52a815bd550e/pybiotk-1.2.1.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.1
2023-11-01T16:26:00,746   Found link https://files.pythonhosted.org/packages/df/39/c06c8538af00a45170fa6216e13703fefeee2b5b195227cacff55d94e8bb/pybiotk-1.2.3.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.3
2023-11-01T16:26:00,746   Found link https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz (from https://pypi.org/simple/pybiotk/), version: 1.2.5
2023-11-01T16:26:00,747 Fetching project page and analyzing links: https://www.piwheels.org/simple/pybiotk/
2023-11-01T16:26:00,747 Getting page https://www.piwheels.org/simple/pybiotk/
2023-11-01T16:26:00,748 Found index url https://www.piwheels.org/simple/
2023-11-01T16:26:00,823 Fetched page https://www.piwheels.org/simple/pybiotk/ as text/html
2023-11-01T16:26:00,837   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp37-cp37m-linux_armv7l.whl#sha256=af295fbb8044148cfdd4c43bb7dbe73b6b1e8fd4e2a167ee28ee5d8883bcf986 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,838   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp37-cp37m-linux_armv6l.whl#sha256=af295fbb8044148cfdd4c43bb7dbe73b6b1e8fd4e2a167ee28ee5d8883bcf986 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,838   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp311-cp311-linux_armv7l.whl#sha256=722db10933ea8fe132e2a1a28e4e296ab1e722f38a32d0088639c3fce026ff74 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,838   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.5-cp311-cp311-linux_armv6l.whl#sha256=722db10933ea8fe132e2a1a28e4e296ab1e722f38a32d0088639c3fce026ff74 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,838   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp39-cp39-linux_armv7l.whl#sha256=54c28aeaeafe285214b9a2178be151502a11de2b5c45205dffa54a5ab894ff63 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,839   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp39-cp39-linux_armv6l.whl#sha256=54c28aeaeafe285214b9a2178be151502a11de2b5c45205dffa54a5ab894ff63 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,839   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp37-cp37m-linux_armv7l.whl#sha256=32313431d1b6182a4d4b8c8e711fd436c3d3fcda71fa59e3e2b9d4910a0a88a6 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,839   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp37-cp37m-linux_armv6l.whl#sha256=32313431d1b6182a4d4b8c8e711fd436c3d3fcda71fa59e3e2b9d4910a0a88a6 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,839   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp311-cp311-linux_armv7l.whl#sha256=cc7472a20581c23d7a00b1692cea3fc0a2ecb8dbf8e578b9ab7dbb4701cb9af0 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,839   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.3-cp311-cp311-linux_armv6l.whl#sha256=cc7472a20581c23d7a00b1692cea3fc0a2ecb8dbf8e578b9ab7dbb4701cb9af0 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,839   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp311-cp311-linux_armv7l.whl#sha256=6ecaca9314ac09b750d05d10cdd652e3dd1ac2cc8f9936fccf0df1eb9dd29655 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,840   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp311-cp311-linux_armv6l.whl#sha256=6ecaca9314ac09b750d05d10cdd652e3dd1ac2cc8f9936fccf0df1eb9dd29655 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,840   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp39-cp39-linux_armv7l.whl#sha256=144a7a71ee8e0bf29c46cea279177232a94953f4771939ff86b411e2041a03a9 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,840   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp39-cp39-linux_armv6l.whl#sha256=144a7a71ee8e0bf29c46cea279177232a94953f4771939ff86b411e2041a03a9 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,840   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp37-cp37m-linux_armv7l.whl#sha256=62b6a1dac642a77187c5a163b17eefccf75b54ec85a4d6622363bb7814f1a565 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,840   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.1-cp37-cp37m-linux_armv6l.whl#sha256=62b6a1dac642a77187c5a163b17eefccf75b54ec85a4d6622363bb7814f1a565 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,841   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=b554bf72c5b0bffe6c1e9a74088314014bb813c6d1d9b6578745e246a0d45687 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,841   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=b554bf72c5b0bffe6c1e9a74088314014bb813c6d1d9b6578745e246a0d45687 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,841   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=9cb3556385c015ece339379fcda2d3dd46022b80c852672e839e31e0a308951e (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,841   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=9cb3556385c015ece339379fcda2d3dd46022b80c852672e839e31e0a308951e (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,841   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp39-cp39-linux_armv7l.whl#sha256=04ce4e8c36dacd8f0a727f6acb1cf990b425d3fcd6e1bc426bca2c316de0bcc8 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,842   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp39-cp39-linux_armv6l.whl#sha256=04ce4e8c36dacd8f0a727f6acb1cf990b425d3fcd6e1bc426bca2c316de0bcc8 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,842   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv7l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,842   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.1-cp37-cp37m-linux_armv6l.whl#sha256=f57da780847a57155b44aa2f7a6e328d345a0f30858083c6669c328b44f194a1 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,842   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,842   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=be8faf4c7b17f96a91c7104a7b5d093ce07c4e6ebd458f4501694a0a42c89881 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,843   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,843   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=fefc94e675065b00c116d2c61c64d178a20bee1079be65fa097b8f134fee5299 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,843   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv7l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,843   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp39-cp39-linux_armv6l.whl#sha256=0b05bf968d17d6ee92be8bf21cf3991df7cb3b3d685fee09049dedb2f9d5ee7c (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,843   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv7l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,843   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.9-cp37-cp37m-linux_armv6l.whl#sha256=be124f7f80c27462ab252101b8748b4825aa2718172dd154380e23d7f2dcb954 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,844   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv7l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,844   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp39-cp39-linux_armv6l.whl#sha256=16889f2c9c5397540b9fa3bfa0396accff8dce33315140eb793f9bedb013c4ad (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,844   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv7l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,844   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.8-cp37-cp37m-linux_armv6l.whl#sha256=ad3883b734204bdb7f690aa520d991f61667159590a41a71870dda41d888085d (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,844   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv7l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,845   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp39-cp39-linux_armv6l.whl#sha256=58efd8944f51edd73913001082ed31919eaa2a61cd84bab7f9b3d6dc4bb5147c (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,845   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv7l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,845   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.7-cp37-cp37m-linux_armv6l.whl#sha256=b3374922018f96941d783f8fbd1419523636af0939729833084abfcbc2857815 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,845   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv7l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,845   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp39-cp39-linux_armv6l.whl#sha256=3ca3fc7f0e19a74789369a1ab6ee666b4658db1d6547739760037140b35b7e3e (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,846   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv7l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,846   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.6-cp37-cp37m-linux_armv6l.whl#sha256=c2c24578a8c96d074c91314ee034316b005ad82fe94da2f2135b6cca4237b374 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,846   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv7l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,846   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp39-cp39-linux_armv6l.whl#sha256=50c81a26e08771be990869c49acd65b172ef531d807be2ef54cc44de12463f76 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,846   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv7l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,846   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.4-cp37-cp37m-linux_armv6l.whl#sha256=1e5895fe1aa6a3e6127f180defd7a420edf6f8b5f4f1b689995f9758b7286846 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,847   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv7l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,847   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp39-cp39-linux_armv6l.whl#sha256=3d07a856b5dfd6012a973e73b174a6b8d70ae723b22a5396f9e1323a3396a327 (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,847   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv7l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,847   Skipping link: No binaries permitted for pybiotk: https://www.piwheels.org/simple/pybiotk/pybiotk-1.0.3-cp37-cp37m-linux_armv6l.whl#sha256=68c34ca6656477c1de6691804d909876e1f42817256079672904805fc0971aca (from https://www.piwheels.org/simple/pybiotk/)
2023-11-01T16:26:00,847 Skipping link: not a file: https://www.piwheels.org/simple/pybiotk/
2023-11-01T16:26:00,848 Skipping link: not a file: https://pypi.org/simple/pybiotk/
2023-11-01T16:26:00,867 Given no hashes to check 1 links for project 'pybiotk': discarding no candidates
2023-11-01T16:26:00,883 Collecting pybiotk==1.2.5
2023-11-01T16:26:00,886   Created temporary directory: /tmp/pip-unpack-7c3nvz7u
2023-11-01T16:26:00,930   Downloading pybiotk-1.2.5.tar.gz (99 kB)
2023-11-01T16:26:01,190   Added pybiotk==1.2.5 from https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz to build tracker '/tmp/pip-build-tracker-cgvqh5ep'
2023-11-01T16:26:01,197   Created temporary directory: /tmp/pip-build-env-8besdpi7
2023-11-01T16:26:01,207   Installing build dependencies: started
2023-11-01T16:26:01,208   Running command pip subprocess to install build dependencies
2023-11-01T16:26:02,371   Using pip 23.3 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-11-01T16:26:02,917   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-11-01T16:26:04,346   Collecting setuptools>=46.1.0
2023-11-01T16:26:04,362     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-11-01T16:26:04,701   Collecting setuptools_scm>=5 (from setuptools_scm[toml]>=5)
2023-11-01T16:26:04,719     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB)
2023-11-01T16:26:04,936   Collecting wheel
2023-11-01T16:26:04,952     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.3-py3-none-any.whl (65 kB)
2023-11-01T16:26:06,149   Collecting Cython<3.0.0,>=0.29.30
2023-11-01T16:26:06,168     Using cached https://www.piwheels.org/simple/cython/Cython-0.29.36-cp39-cp39-linux_armv7l.whl (4.9 MB)
2023-11-01T16:26:06,749   Collecting packaging>=20 (from setuptools_scm>=5->setuptools_scm[toml]>=5)
2023-11-01T16:26:06,771     Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB)
2023-11-01T16:26:06,891   Collecting typing-extensions (from setuptools_scm>=5->setuptools_scm[toml]>=5)
2023-11-01T16:26:06,907     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.8.0-py3-none-any.whl (31 kB)
2023-11-01T16:26:07,018   Collecting tomli>=1 (from setuptools_scm>=5->setuptools_scm[toml]>=5)
2023-11-01T16:26:07,033     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-11-01T16:26:08,973   Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, Cython, setuptools_scm
2023-11-01T16:26:09,196     Creating /tmp/pip-build-env-8besdpi7/overlay/bin
2023-11-01T16:26:09,199     changing mode of /tmp/pip-build-env-8besdpi7/overlay/bin/wheel to 755
2023-11-01T16:26:14,398     changing mode of /tmp/pip-build-env-8besdpi7/overlay/bin/cygdb to 755
2023-11-01T16:26:14,400     changing mode of /tmp/pip-build-env-8besdpi7/overlay/bin/cython to 755
2023-11-01T16:26:14,403     changing mode of /tmp/pip-build-env-8besdpi7/overlay/bin/cythonize to 755
2023-11-01T16:26:14,624   Successfully installed Cython-0.29.36 packaging-23.2 setuptools-68.2.2 setuptools_scm-8.0.4 tomli-2.0.1 typing-extensions-4.8.0 wheel-0.41.3
2023-11-01T16:26:14,809   WARNING: There was an error checking the latest version of pip.
2023-11-01T16:26:15,181   Installing build dependencies: finished with status 'done'
2023-11-01T16:26:15,186   Getting requirements to build wheel: started
2023-11-01T16:26:15,187   Running command Getting requirements to build wheel
2023-11-01T16:26:17,626   Compiling src/bx/bitset.pyx because it changed.
2023-11-01T16:26:17,626   Compiling src/bx/cluster.pyx because it changed.
2023-11-01T16:26:17,626   Compiling src/bx/intersection.pyx because it changed.
2023-11-01T16:26:17,627   [1/3] Cythonizing src/bx/bitset.pyx
2023-11-01T16:26:17,627   [2/3] Cythonizing src/bx/cluster.pyx
2023-11-01T16:26:17,627   [3/3] Cythonizing src/bx/intersection.pyx
2023-11-01T16:26:17,926   running egg_info
2023-11-01T16:26:17,934   writing src/pybiotk.egg-info/PKG-INFO
2023-11-01T16:26:17,938   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2023-11-01T16:26:17,941   writing entry points to src/pybiotk.egg-info/entry_points.txt
2023-11-01T16:26:17,944   writing requirements to src/pybiotk.egg-info/requires.txt
2023-11-01T16:26:17,945   writing top-level names to src/pybiotk.egg-info/top_level.txt
2023-11-01T16:26:18,020   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-11-01T16:26:18,031   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-11-01T16:26:18,038   adding license file 'LICENSE.txt'
2023-11-01T16:26:18,045   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-11-01T16:26:18,216   Getting requirements to build wheel: finished with status 'done'
2023-11-01T16:26:18,226   Created temporary directory: /tmp/pip-modern-metadata-_cz8nxob
2023-11-01T16:26:18,229   Preparing metadata (pyproject.toml): started
2023-11-01T16:26:18,230   Running command Preparing metadata (pyproject.toml)
2023-11-01T16:26:19,534   running dist_info
2023-11-01T16:26:19,557   creating /tmp/pip-modern-metadata-_cz8nxob/pybiotk.egg-info
2023-11-01T16:26:19,563   writing /tmp/pip-modern-metadata-_cz8nxob/pybiotk.egg-info/PKG-INFO
2023-11-01T16:26:19,569   writing dependency_links to /tmp/pip-modern-metadata-_cz8nxob/pybiotk.egg-info/dependency_links.txt
2023-11-01T16:26:19,572   writing entry points to /tmp/pip-modern-metadata-_cz8nxob/pybiotk.egg-info/entry_points.txt
2023-11-01T16:26:19,574   writing requirements to /tmp/pip-modern-metadata-_cz8nxob/pybiotk.egg-info/requires.txt
2023-11-01T16:26:19,575   writing top-level names to /tmp/pip-modern-metadata-_cz8nxob/pybiotk.egg-info/top_level.txt
2023-11-01T16:26:19,577   writing manifest file '/tmp/pip-modern-metadata-_cz8nxob/pybiotk.egg-info/SOURCES.txt'
2023-11-01T16:26:19,646   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-11-01T16:26:19,655   reading manifest file '/tmp/pip-modern-metadata-_cz8nxob/pybiotk.egg-info/SOURCES.txt'
2023-11-01T16:26:19,658   adding license file 'LICENSE.txt'
2023-11-01T16:26:19,663   writing manifest file '/tmp/pip-modern-metadata-_cz8nxob/pybiotk.egg-info/SOURCES.txt'
2023-11-01T16:26:19,664   creating '/tmp/pip-modern-metadata-_cz8nxob/pybiotk-1.2.5.dist-info'
2023-11-01T16:26:19,886   Preparing metadata (pyproject.toml): finished with status 'done'
2023-11-01T16:26:19,912   Source in /tmp/pip-wheel-n8va6ssa/pybiotk_69241cfb1ca5488b80f67df9b0aaf6d4 has version 1.2.5, which satisfies requirement pybiotk==1.2.5 from https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz
2023-11-01T16:26:19,921   Removed pybiotk==1.2.5 from https://files.pythonhosted.org/packages/fb/15/83e8498512e533c13bf14dd62b83cf20da537c315092519e3930e43b3950/pybiotk-1.2.5.tar.gz from build tracker '/tmp/pip-build-tracker-cgvqh5ep'
2023-11-01T16:26:19,929 Created temporary directory: /tmp/pip-unpack-5mlrs6yb
2023-11-01T16:26:19,937 Created temporary directory: /tmp/pip-unpack-cpgtp8y9
2023-11-01T16:26:19,960 Building wheels for collected packages: pybiotk
2023-11-01T16:26:19,969   Created temporary directory: /tmp/pip-wheel-j0oz1mth
2023-11-01T16:26:19,969   Destination directory: /tmp/pip-wheel-j0oz1mth
2023-11-01T16:26:19,977   Building wheel for pybiotk (pyproject.toml): started
2023-11-01T16:26:19,978   Running command Building wheel for pybiotk (pyproject.toml)
2023-11-01T16:26:21,422   running bdist_wheel
2023-11-01T16:26:21,471   running build
2023-11-01T16:26:21,471   running build_py
2023-11-01T16:26:21,481   creating build/lib.linux-armv7l-cpython-39
2023-11-01T16:26:21,482   creating build/lib.linux-armv7l-cpython-39/pybiotk
2023-11-01T16:26:21,483   copying src/pybiotk/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk
2023-11-01T16:26:21,486   creating build/lib.linux-armv7l-cpython-39/stream
2023-11-01T16:26:21,487   copying src/stream/pipe.py -> build/lib.linux-armv7l-cpython-39/stream
2023-11-01T16:26:21,490   copying src/stream/__init__.py -> build/lib.linux-armv7l-cpython-39/stream
2023-11-01T16:26:21,492   copying src/stream/stream.py -> build/lib.linux-armv7l-cpython-39/stream
2023-11-01T16:26:21,495   creating build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-11-01T16:26:21,496   copying src/pybiotk/intervals/merge_bed3.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-11-01T16:26:21,498   copying src/pybiotk/intervals/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-11-01T16:26:21,500   copying src/pybiotk/intervals/grange.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-11-01T16:26:21,503   copying src/pybiotk/intervals/merge_intervals.py -> build/lib.linux-armv7l-cpython-39/pybiotk/intervals
2023-11-01T16:26:21,506   creating build/lib.linux-armv7l-cpython-39/pybiotk/string
2023-11-01T16:26:21,506   copying src/pybiotk/string/motif.py -> build/lib.linux-armv7l-cpython-39/pybiotk/string
2023-11-01T16:26:21,508   copying src/pybiotk/string/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/string
2023-11-01T16:26:21,510   copying src/pybiotk/string/sequence.py -> build/lib.linux-armv7l-cpython-39/pybiotk/string
2023-11-01T16:26:21,513   creating build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-11-01T16:26:21,514   copying src/pybiotk/convert/bed2bedgraph.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-11-01T16:26:21,516   copying src/pybiotk/convert/bam2fastx.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-11-01T16:26:21,518   copying src/pybiotk/convert/fa2fastq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-11-01T16:26:21,520   copying src/pybiotk/convert/gtf2bed.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-11-01T16:26:21,523   copying src/pybiotk/convert/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-11-01T16:26:21,525   copying src/pybiotk/convert/fq2fasta.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-11-01T16:26:21,527   copying src/pybiotk/convert/bampe_order_by_name.py -> build/lib.linux-armv7l-cpython-39/pybiotk/convert
2023-11-01T16:26:21,529   creating build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-11-01T16:26:21,530   copying src/pybiotk/io/fasta.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-11-01T16:26:21,533   copying src/pybiotk/io/fastq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-11-01T16:26:21,535   copying src/pybiotk/io/bw.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-11-01T16:26:21,538   copying src/pybiotk/io/bed.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-11-01T16:26:21,541   copying src/pybiotk/io/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-11-01T16:26:21,543   copying src/pybiotk/io/bam.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-11-01T16:26:21,545   copying src/pybiotk/io/gtf.py -> build/lib.linux-armv7l-cpython-39/pybiotk/io
2023-11-01T16:26:21,548   creating build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-11-01T16:26:21,549   copying src/pybiotk/data/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-11-01T16:26:21,552   creating build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,553   copying src/pybiotk/utils/fragment_size.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,556   copying src/pybiotk/utils/reference_count.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,559   copying src/pybiotk/utils/merge_row.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,561   copying src/pybiotk/utils/summary_log.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,563   copying src/pybiotk/utils/rmats_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,565   copying src/pybiotk/utils/gtf_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,567   copying src/pybiotk/utils/utils.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,570   copying src/pybiotk/utils/fasta_filter.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,572   copying src/pybiotk/utils/genomefetcher.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,575   copying src/pybiotk/utils/seq_random.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,577   copying src/pybiotk/utils/fastq_join.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,579   copying src/pybiotk/utils/reverse_fastx.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,581   copying src/pybiotk/utils/bam_random.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,583   copying src/pybiotk/utils/fastx_rename.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,584   copying src/pybiotk/utils/read_tables.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,586   copying src/pybiotk/utils/subseq_analysis.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,588   copying src/pybiotk/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,590   copying src/pybiotk/utils/pyanno.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,593   copying src/pybiotk/utils/normalize.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,595   copying src/pybiotk/utils/merge_subseq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,597   copying src/pybiotk/utils/fastq_uniq.py -> build/lib.linux-armv7l-cpython-39/pybiotk/utils
2023-11-01T16:26:21,600   creating build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-11-01T16:26:21,601   copying src/pybiotk/annodb/gene.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-11-01T16:26:21,603   copying src/pybiotk/annodb/transcript.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-11-01T16:26:21,606   copying src/pybiotk/annodb/merged_transcript.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-11-01T16:26:21,608   copying src/pybiotk/annodb/__init__.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-11-01T16:26:21,611   copying src/pybiotk/annodb/anno.py -> build/lib.linux-armv7l-cpython-39/pybiotk/annodb
2023-11-01T16:26:21,613   running egg_info
2023-11-01T16:26:21,620   writing src/pybiotk.egg-info/PKG-INFO
2023-11-01T16:26:21,624   writing dependency_links to src/pybiotk.egg-info/dependency_links.txt
2023-11-01T16:26:21,627   writing entry points to src/pybiotk.egg-info/entry_points.txt
2023-11-01T16:26:21,629   writing requirements to src/pybiotk.egg-info/requires.txt
2023-11-01T16:26:21,630   writing top-level names to src/pybiotk.egg-info/top_level.txt
2023-11-01T16:26:21,675   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-11-01T16:26:21,684   reading manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-11-01T16:26:21,689   adding license file 'LICENSE.txt'
2023-11-01T16:26:21,696   writing manifest file 'src/pybiotk.egg-info/SOURCES.txt'
2023-11-01T16:26:21,702   copying src/pybiotk/data/hg38.chrom.sizes -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-11-01T16:26:21,705   copying src/pybiotk/data/mm10.chrom.sizes -> build/lib.linux-armv7l-cpython-39/pybiotk/data
2023-11-01T16:26:21,714   running build_ext
2023-11-01T16:26:21,720   building 'pybiotk.bx.bitset' extension
2023-11-01T16:26:21,721   creating build/temp.linux-armv7l-cpython-39
2023-11-01T16:26:21,721   creating build/temp.linux-armv7l-cpython-39/build
2023-11-01T16:26:21,722   creating build/temp.linux-armv7l-cpython-39/build/src
2023-11-01T16:26:21,723   creating build/temp.linux-armv7l-cpython-39/build/src/bx
2023-11-01T16:26:21,724   creating build/temp.linux-armv7l-cpython-39/src
2023-11-01T16:26:21,725   creating build/temp.linux-armv7l-cpython-39/src/bx
2023-11-01T16:26:21,726   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c build/src/bx/bitset.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/bitset.o
2023-11-01T16:26:27,534   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/binBits.c -o build/temp.linux-armv7l-cpython-39/src/bx/binBits.o
2023-11-01T16:26:27,920   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/bits.c -o build/temp.linux-armv7l-cpython-39/src/bx/bits.o
2023-11-01T16:26:28,310   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/common.c -o build/temp.linux-armv7l-cpython-39/src/bx/common.o
2023-11-01T16:26:28,539   creating build/lib.linux-armv7l-cpython-39/pybiotk/bx
2023-11-01T16:26:28,541   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/bitset.o build/temp.linux-armv7l-cpython-39/src/bx/binBits.o build/temp.linux-armv7l-cpython-39/src/bx/bits.o build/temp.linux-armv7l-cpython-39/src/bx/common.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so
2023-11-01T16:26:28,930   building 'pybiotk.bx.cluster' extension
2023-11-01T16:26:28,932   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c build/src/bx/cluster.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/cluster.o
2023-11-01T16:26:30,959   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Isrc/bx -I/usr/include/python3.9 -c src/bx/cluster.c -o build/temp.linux-armv7l-cpython-39/src/bx/cluster.o
2023-11-01T16:26:31,436   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/cluster.o build/temp.linux-armv7l-cpython-39/src/bx/cluster.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so
2023-11-01T16:26:31,540   building 'pybiotk.bx.intersection' extension
2023-11-01T16:26:31,541   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c build/src/bx/intersection.c -o build/temp.linux-armv7l-cpython-39/build/src/bx/intersection.o
2023-11-01T16:26:40,363   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/build/src/bx/intersection.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so
2023-11-01T16:26:40,486   running build_scripts
2023-11-01T16:26:40,487   creating build/scripts-3.9
2023-11-01T16:26:40,488   copying rscripts/diff_expr_DESeq2.R -> build/scripts-3.9
2023-11-01T16:26:40,491   copying rscripts/plot_FRiPs.R -> build/scripts-3.9
2023-11-01T16:26:40,493   copying rscripts/plot_chip_summary.R -> build/scripts-3.9
2023-11-01T16:26:40,495   copying rscripts/plot_bar.R -> build/scripts-3.9
2023-11-01T16:26:40,497   copying rscripts/plot_hist.R -> build/scripts-3.9
2023-11-01T16:26:40,499   copying rscripts/plot_corr.R -> build/scripts-3.9
2023-11-01T16:26:40,502   copying rscripts/diff_expr_plot.R -> build/scripts-3.9
2023-11-01T16:26:40,504   copying rscripts/peak_anno.R -> build/scripts-3.9
2023-11-01T16:26:40,506   copying rscripts/plot_peak_width.R -> build/scripts-3.9
2023-11-01T16:26:40,509   copying rscripts/plot_venn.R -> build/scripts-3.9
2023-11-01T16:26:40,511   copying rscripts/diff_expr_edgeR.R -> build/scripts-3.9
2023-11-01T16:26:40,513   copying rscripts/plot_rep_cor.R -> build/scripts-3.9
2023-11-01T16:26:40,515   copying rscripts/plot_deeptools_fragmentsize.R -> build/scripts-3.9
2023-11-01T16:26:40,517   copying scripts/merge_subseq.sh -> build/scripts-3.9
2023-11-01T16:26:40,519   copying scripts/get_chrom_length.sh -> build/scripts-3.9
2023-11-01T16:26:40,521   copying scripts/remove_duplicates.sh -> build/scripts-3.9
2023-11-01T16:26:40,523   copying scripts/fasta_len.sh -> build/scripts-3.9
2023-11-01T16:26:40,525   copying scripts/fasta_u2t.sh -> build/scripts-3.9
2023-11-01T16:26:40,527   copying scripts/gtfparser.sh -> build/scripts-3.9
2023-11-01T16:26:40,529   copying scripts/fastq_len.sh -> build/scripts-3.9
2023-11-01T16:26:40,531   changing mode of build/scripts-3.9/diff_expr_DESeq2.R from 644 to 755
2023-11-01T16:26:40,531   changing mode of build/scripts-3.9/plot_FRiPs.R from 644 to 755
2023-11-01T16:26:40,531   changing mode of build/scripts-3.9/plot_chip_summary.R from 644 to 755
2023-11-01T16:26:40,532   changing mode of build/scripts-3.9/plot_bar.R from 644 to 755
2023-11-01T16:26:40,532   changing mode of build/scripts-3.9/plot_hist.R from 644 to 755
2023-11-01T16:26:40,533   changing mode of build/scripts-3.9/plot_corr.R from 644 to 755
2023-11-01T16:26:40,533   changing mode of build/scripts-3.9/diff_expr_plot.R from 644 to 755
2023-11-01T16:26:40,533   changing mode of build/scripts-3.9/peak_anno.R from 644 to 755
2023-11-01T16:26:40,534   changing mode of build/scripts-3.9/plot_peak_width.R from 644 to 755
2023-11-01T16:26:40,534   changing mode of build/scripts-3.9/plot_venn.R from 644 to 755
2023-11-01T16:26:40,534   changing mode of build/scripts-3.9/diff_expr_edgeR.R from 644 to 755
2023-11-01T16:26:40,535   changing mode of build/scripts-3.9/plot_rep_cor.R from 644 to 755
2023-11-01T16:26:40,535   changing mode of build/scripts-3.9/plot_deeptools_fragmentsize.R from 644 to 755
2023-11-01T16:26:40,535   changing mode of build/scripts-3.9/merge_subseq.sh from 644 to 755
2023-11-01T16:26:40,536   changing mode of build/scripts-3.9/get_chrom_length.sh from 644 to 755
2023-11-01T16:26:40,536   changing mode of build/scripts-3.9/remove_duplicates.sh from 644 to 755
2023-11-01T16:26:40,537   changing mode of build/scripts-3.9/fasta_len.sh from 644 to 755
2023-11-01T16:26:40,537   changing mode of build/scripts-3.9/fasta_u2t.sh from 644 to 755
2023-11-01T16:26:40,537   changing mode of build/scripts-3.9/gtfparser.sh from 644 to 755
2023-11-01T16:26:40,538   changing mode of build/scripts-3.9/fastq_len.sh from 644 to 755
2023-11-01T16:26:40,560   installing to build/bdist.linux-armv7l/wheel
2023-11-01T16:26:40,560   running install
2023-11-01T16:26:40,586   running install_lib
2023-11-01T16:26:40,596   creating build/bdist.linux-armv7l
2023-11-01T16:26:40,596   creating build/bdist.linux-armv7l/wheel
2023-11-01T16:26:40,598   creating build/bdist.linux-armv7l/wheel/pybiotk
2023-11-01T16:26:40,600   creating build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T16:26:40,601   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/merge_bed3.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T16:26:40,603   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T16:26:40,604   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/grange.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T16:26:40,606   copying build/lib.linux-armv7l-cpython-39/pybiotk/intervals/merge_intervals.py -> build/bdist.linux-armv7l/wheel/pybiotk/intervals
2023-11-01T16:26:40,609   creating build/bdist.linux-armv7l/wheel/pybiotk/string
2023-11-01T16:26:40,610   copying build/lib.linux-armv7l-cpython-39/pybiotk/string/motif.py -> build/bdist.linux-armv7l/wheel/pybiotk/string
2023-11-01T16:26:40,611   copying build/lib.linux-armv7l-cpython-39/pybiotk/string/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/string
2023-11-01T16:26:40,613   copying build/lib.linux-armv7l-cpython-39/pybiotk/string/sequence.py -> build/bdist.linux-armv7l/wheel/pybiotk/string
2023-11-01T16:26:40,615   creating build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-11-01T16:26:40,616   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-11-01T16:26:40,625   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-11-01T16:26:40,631   copying build/lib.linux-armv7l-cpython-39/pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pybiotk/bx
2023-11-01T16:26:40,648   creating build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T16:26:40,649   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bed2bedgraph.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T16:26:40,651   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bam2fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T16:26:40,653   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/fa2fastq.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T16:26:40,654   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/gtf2bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T16:26:40,656   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T16:26:40,658   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/fq2fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T16:26:40,659   copying build/lib.linux-armv7l-cpython-39/pybiotk/convert/bampe_order_by_name.py -> build/bdist.linux-armv7l/wheel/pybiotk/convert
2023-11-01T16:26:40,661   copying build/lib.linux-armv7l-cpython-39/pybiotk/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk
2023-11-01T16:26:40,663   creating build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T16:26:40,664   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/fasta.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T16:26:40,666   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/fastq.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T16:26:40,668   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bw.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T16:26:40,670   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bed.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T16:26:40,672   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T16:26:40,674   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/bam.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T16:26:40,676   copying build/lib.linux-armv7l-cpython-39/pybiotk/io/gtf.py -> build/bdist.linux-armv7l/wheel/pybiotk/io
2023-11-01T16:26:40,679   creating build/bdist.linux-armv7l/wheel/pybiotk/data
2023-11-01T16:26:40,680   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/mm10.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-11-01T16:26:40,682   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/hg38.chrom.sizes -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-11-01T16:26:40,684   copying build/lib.linux-armv7l-cpython-39/pybiotk/data/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/data
2023-11-01T16:26:40,686   creating build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,687   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fragment_size.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,690   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/reference_count.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,691   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/merge_row.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,693   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/summary_log.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,696   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/rmats_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,697   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/gtf_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,699   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/utils.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,701   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fasta_filter.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,703   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/genomefetcher.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,705   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/seq_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,707   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastq_join.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,709   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/reverse_fastx.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,711   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/bam_random.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,712   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastx_rename.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,714   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/read_tables.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,716   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/subseq_analysis.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,718   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,719   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/pyanno.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,722   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/normalize.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,723   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/merge_subseq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,725   copying build/lib.linux-armv7l-cpython-39/pybiotk/utils/fastq_uniq.py -> build/bdist.linux-armv7l/wheel/pybiotk/utils
2023-11-01T16:26:40,727   creating build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T16:26:40,728   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/gene.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T16:26:40,730   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T16:26:40,732   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/merged_transcript.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T16:26:40,735   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/__init__.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T16:26:40,737   copying build/lib.linux-armv7l-cpython-39/pybiotk/annodb/anno.py -> build/bdist.linux-armv7l/wheel/pybiotk/annodb
2023-11-01T16:26:40,739   creating build/bdist.linux-armv7l/wheel/stream
2023-11-01T16:26:40,740   copying build/lib.linux-armv7l-cpython-39/stream/pipe.py -> build/bdist.linux-armv7l/wheel/stream
2023-11-01T16:26:40,743   copying build/lib.linux-armv7l-cpython-39/stream/__init__.py -> build/bdist.linux-armv7l/wheel/stream
2023-11-01T16:26:40,744   copying build/lib.linux-armv7l-cpython-39/stream/stream.py -> build/bdist.linux-armv7l/wheel/stream
2023-11-01T16:26:40,746   running install_egg_info
2023-11-01T16:26:40,756   Copying src/pybiotk.egg-info to build/bdist.linux-armv7l/wheel/pybiotk-1.2.5-py3.9.egg-info
2023-11-01T16:26:40,770   running install_scripts
2023-11-01T16:26:40,771   creating build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data
2023-11-01T16:26:40,771   creating build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,772   copying build/scripts-3.9/diff_expr_DESeq2.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,775   copying build/scripts-3.9/plot_FRiPs.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,776   copying build/scripts-3.9/plot_chip_summary.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,779   copying build/scripts-3.9/merge_subseq.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,780   copying build/scripts-3.9/plot_bar.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,782   copying build/scripts-3.9/get_chrom_length.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,784   copying build/scripts-3.9/remove_duplicates.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,785   copying build/scripts-3.9/plot_hist.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,787   copying build/scripts-3.9/plot_corr.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,789   copying build/scripts-3.9/fasta_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,790   copying build/scripts-3.9/fasta_u2t.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,792   copying build/scripts-3.9/diff_expr_plot.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,795   copying build/scripts-3.9/peak_anno.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,796   copying build/scripts-3.9/plot_peak_width.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,798   copying build/scripts-3.9/plot_venn.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,800   copying build/scripts-3.9/diff_expr_edgeR.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,802   copying build/scripts-3.9/plot_rep_cor.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,804   copying build/scripts-3.9/plot_deeptools_fragmentsize.R -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,806   copying build/scripts-3.9/gtfparser.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,807   copying build/scripts-3.9/fastq_len.sh -> build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts
2023-11-01T16:26:40,809   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/diff_expr_DESeq2.R to 755
2023-11-01T16:26:40,809   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_FRiPs.R to 755
2023-11-01T16:26:40,809   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_chip_summary.R to 755
2023-11-01T16:26:40,810   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/merge_subseq.sh to 755
2023-11-01T16:26:40,810   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_bar.R to 755
2023-11-01T16:26:40,810   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/get_chrom_length.sh to 755
2023-11-01T16:26:40,811   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/remove_duplicates.sh to 755
2023-11-01T16:26:40,811   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_hist.R to 755
2023-11-01T16:26:40,811   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_corr.R to 755
2023-11-01T16:26:40,812   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/fasta_len.sh to 755
2023-11-01T16:26:40,812   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/fasta_u2t.sh to 755
2023-11-01T16:26:40,812   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/diff_expr_plot.R to 755
2023-11-01T16:26:40,813   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/peak_anno.R to 755
2023-11-01T16:26:40,813   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_peak_width.R to 755
2023-11-01T16:26:40,813   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_venn.R to 755
2023-11-01T16:26:40,814   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/diff_expr_edgeR.R to 755
2023-11-01T16:26:40,814   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_rep_cor.R to 755
2023-11-01T16:26:40,814   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/plot_deeptools_fragmentsize.R to 755
2023-11-01T16:26:40,815   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/gtfparser.sh to 755
2023-11-01T16:26:40,815   changing mode of build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.data/scripts/fastq_len.sh to 755
2023-11-01T16:26:40,862   creating build/bdist.linux-armv7l/wheel/pybiotk-1.2.5.dist-info/WHEEL
2023-11-01T16:26:40,865   creating '/tmp/pip-wheel-j0oz1mth/.tmp-arroty_6/pybiotk-1.2.5-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-11-01T16:26:40,867   adding 'pybiotk/__init__.py'
2023-11-01T16:26:40,869   adding 'pybiotk/annodb/__init__.py'
2023-11-01T16:26:40,871   adding 'pybiotk/annodb/anno.py'
2023-11-01T16:26:40,873   adding 'pybiotk/annodb/gene.py'
2023-11-01T16:26:40,875   adding 'pybiotk/annodb/merged_transcript.py'
2023-11-01T16:26:40,876   adding 'pybiotk/annodb/transcript.py'
2023-11-01T16:26:40,971   adding 'pybiotk/bx/bitset.cpython-39-arm-linux-gnueabihf.so'
2023-11-01T16:26:41,008   adding 'pybiotk/bx/cluster.cpython-39-arm-linux-gnueabihf.so'
2023-11-01T16:26:41,140   adding 'pybiotk/bx/intersection.cpython-39-arm-linux-gnueabihf.so'
2023-11-01T16:26:41,146   adding 'pybiotk/convert/__init__.py'
2023-11-01T16:26:41,147   adding 'pybiotk/convert/bam2fastx.py'
2023-11-01T16:26:41,149   adding 'pybiotk/convert/bampe_order_by_name.py'
2023-11-01T16:26:41,150   adding 'pybiotk/convert/bed2bedgraph.py'
2023-11-01T16:26:41,151   adding 'pybiotk/convert/fa2fastq.py'
2023-11-01T16:26:41,152   adding 'pybiotk/convert/fq2fasta.py'
2023-11-01T16:26:41,154   adding 'pybiotk/convert/gtf2bed.py'
2023-11-01T16:26:41,155   adding 'pybiotk/data/__init__.py'
2023-11-01T16:26:41,158   adding 'pybiotk/data/hg38.chrom.sizes'
2023-11-01T16:26:41,159   adding 'pybiotk/data/mm10.chrom.sizes'
2023-11-01T16:26:41,161   adding 'pybiotk/intervals/__init__.py'
2023-11-01T16:26:41,162   adding 'pybiotk/intervals/grange.py'
2023-11-01T16:26:41,163   adding 'pybiotk/intervals/merge_bed3.py'
2023-11-01T16:26:41,165   adding 'pybiotk/intervals/merge_intervals.py'
2023-11-01T16:26:41,166   adding 'pybiotk/io/__init__.py'
2023-11-01T16:26:41,168   adding 'pybiotk/io/bam.py'
2023-11-01T16:26:41,170   adding 'pybiotk/io/bed.py'
2023-11-01T16:26:41,171   adding 'pybiotk/io/bw.py'
2023-11-01T16:26:41,173   adding 'pybiotk/io/fasta.py'
2023-11-01T16:26:41,174   adding 'pybiotk/io/fastq.py'
2023-11-01T16:26:41,176   adding 'pybiotk/io/gtf.py'
2023-11-01T16:26:41,178   adding 'pybiotk/string/__init__.py'
2023-11-01T16:26:41,179   adding 'pybiotk/string/motif.py'
2023-11-01T16:26:41,180   adding 'pybiotk/string/sequence.py'
2023-11-01T16:26:41,182   adding 'pybiotk/utils/__init__.py'
2023-11-01T16:26:41,183   adding 'pybiotk/utils/bam_random.py'
2023-11-01T16:26:41,185   adding 'pybiotk/utils/fasta_filter.py'
2023-11-01T16:26:41,186   adding 'pybiotk/utils/fastq_join.py'
2023-11-01T16:26:41,187   adding 'pybiotk/utils/fastq_uniq.py'
2023-11-01T16:26:41,189   adding 'pybiotk/utils/fastx_rename.py'
2023-11-01T16:26:41,190   adding 'pybiotk/utils/fragment_size.py'
2023-11-01T16:26:41,192   adding 'pybiotk/utils/genomefetcher.py'
2023-11-01T16:26:41,193   adding 'pybiotk/utils/gtf_filter.py'
2023-11-01T16:26:41,195   adding 'pybiotk/utils/merge_row.py'
2023-11-01T16:26:41,196   adding 'pybiotk/utils/merge_subseq.py'
2023-11-01T16:26:41,197   adding 'pybiotk/utils/normalize.py'
2023-11-01T16:26:41,199   adding 'pybiotk/utils/pyanno.py'
2023-11-01T16:26:41,201   adding 'pybiotk/utils/read_tables.py'
2023-11-01T16:26:41,202   adding 'pybiotk/utils/reference_count.py'
2023-11-01T16:26:41,203   adding 'pybiotk/utils/reverse_fastx.py'
2023-11-01T16:26:41,204   adding 'pybiotk/utils/rmats_filter.py'
2023-11-01T16:26:41,206   adding 'pybiotk/utils/seq_random.py'
2023-11-01T16:26:41,207   adding 'pybiotk/utils/subseq_analysis.py'
2023-11-01T16:26:41,209   adding 'pybiotk/utils/summary_log.py'
2023-11-01T16:26:41,211   adding 'pybiotk/utils/utils.py'
2023-11-01T16:26:41,214   adding 'pybiotk-1.2.5.data/scripts/diff_expr_DESeq2.R'
2023-11-01T16:26:41,215   adding 'pybiotk-1.2.5.data/scripts/diff_expr_edgeR.R'
2023-11-01T16:26:41,218   adding 'pybiotk-1.2.5.data/scripts/diff_expr_plot.R'
2023-11-01T16:26:41,219   adding 'pybiotk-1.2.5.data/scripts/fasta_len.sh'
2023-11-01T16:26:41,220   adding 'pybiotk-1.2.5.data/scripts/fasta_u2t.sh'
2023-11-01T16:26:41,221   adding 'pybiotk-1.2.5.data/scripts/fastq_len.sh'
2023-11-01T16:26:41,222   adding 'pybiotk-1.2.5.data/scripts/get_chrom_length.sh'
2023-11-01T16:26:41,224   adding 'pybiotk-1.2.5.data/scripts/gtfparser.sh'
2023-11-01T16:26:41,225   adding 'pybiotk-1.2.5.data/scripts/merge_subseq.sh'
2023-11-01T16:26:41,226   adding 'pybiotk-1.2.5.data/scripts/peak_anno.R'
2023-11-01T16:26:41,227   adding 'pybiotk-1.2.5.data/scripts/plot_FRiPs.R'
2023-11-01T16:26:41,229   adding 'pybiotk-1.2.5.data/scripts/plot_bar.R'
2023-11-01T16:26:41,230   adding 'pybiotk-1.2.5.data/scripts/plot_chip_summary.R'
2023-11-01T16:26:41,232   adding 'pybiotk-1.2.5.data/scripts/plot_corr.R'
2023-11-01T16:26:41,233   adding 'pybiotk-1.2.5.data/scripts/plot_deeptools_fragmentsize.R'
2023-11-01T16:26:41,234   adding 'pybiotk-1.2.5.data/scripts/plot_hist.R'
2023-11-01T16:26:41,236   adding 'pybiotk-1.2.5.data/scripts/plot_peak_width.R'
2023-11-01T16:26:41,237   adding 'pybiotk-1.2.5.data/scripts/plot_rep_cor.R'
2023-11-01T16:26:41,238   adding 'pybiotk-1.2.5.data/scripts/plot_venn.R'
2023-11-01T16:26:41,239   adding 'pybiotk-1.2.5.data/scripts/remove_duplicates.sh'
2023-11-01T16:26:41,242   adding 'stream/__init__.py'
2023-11-01T16:26:41,244   adding 'stream/pipe.py'
2023-11-01T16:26:41,246   adding 'stream/stream.py'
2023-11-01T16:26:41,247   adding 'pybiotk-1.2.5.dist-info/LICENSE.txt'
2023-11-01T16:26:41,248   adding 'pybiotk-1.2.5.dist-info/METADATA'
2023-11-01T16:26:41,249   adding 'pybiotk-1.2.5.dist-info/WHEEL'
2023-11-01T16:26:41,250   adding 'pybiotk-1.2.5.dist-info/entry_points.txt'
2023-11-01T16:26:41,251   adding 'pybiotk-1.2.5.dist-info/top_level.txt'
2023-11-01T16:26:41,252   adding 'pybiotk-1.2.5.dist-info/RECORD'
2023-11-01T16:26:41,261   removing build/bdist.linux-armv7l/wheel
2023-11-01T16:26:41,411   Building wheel for pybiotk (pyproject.toml): finished with status 'done'
2023-11-01T16:26:41,427   Created wheel for pybiotk: filename=pybiotk-1.2.5-cp39-cp39-linux_armv7l.whl size=566434 sha256=1bc04a508737f0d58899a64d071a1a96b30deed761a1e3fe01629f887fb9d5fc
2023-11-01T16:26:41,428   Stored in directory: /tmp/pip-ephem-wheel-cache-top776oh/wheels/32/54/3c/11cd5a93d29b67b34c5bd8d44ec9722e635eadbbcc3d6d1c53
2023-11-01T16:26:41,442 Successfully built pybiotk
2023-11-01T16:26:41,460 Removed build tracker: '/tmp/pip-build-tracker-cgvqh5ep'