2023-11-05T11:26:31,282 Created temporary directory: /tmp/pip-build-tracker-6m0iubcn 2023-11-05T11:26:31,283 Initialized build tracking at /tmp/pip-build-tracker-6m0iubcn 2023-11-05T11:26:31,284 Created build tracker: /tmp/pip-build-tracker-6m0iubcn 2023-11-05T11:26:31,284 Entered build tracker: /tmp/pip-build-tracker-6m0iubcn 2023-11-05T11:26:31,285 Created temporary directory: /tmp/pip-wheel-loe19zn2 2023-11-05T11:26:31,288 Created temporary directory: /tmp/pip-ephem-wheel-cache-x5oiqhav 2023-11-05T11:26:31,310 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-05T11:26:31,314 2 location(s) to search for versions of capcruncher: 2023-11-05T11:26:31,314 * https://pypi.org/simple/capcruncher/ 2023-11-05T11:26:31,314 * https://www.piwheels.org/simple/capcruncher/ 2023-11-05T11:26:31,315 Fetching project page and analyzing links: https://pypi.org/simple/capcruncher/ 2023-11-05T11:26:31,316 Getting page https://pypi.org/simple/capcruncher/ 2023-11-05T11:26:31,317 Found index url https://pypi.org/simple/ 2023-11-05T11:26:31,542 Fetched page https://pypi.org/simple/capcruncher/ as application/vnd.pypi.simple.v1+json 2023-11-05T11:26:31,548 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/34/0a/9e75866768f2f383fb94a19406fc1351c2752e365607839d6e2bb1d8d84b/capcruncher-0.1.0a1-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8) 2023-11-05T11:26:31,549 Found link https://files.pythonhosted.org/packages/3c/f1/f89b867eec66701b2f41487ec19a3092f869cba76c6d15750220af30ab7b/capcruncher-0.1.0a1.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8), version: 0.1.0a1 2023-11-05T11:26:31,550 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/1d/1b/b3083fd403c5ea09c7ac18edb1a69b795ab753e1dce96d3837c6777c090a/capcruncher-0.1.0a2-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8) 2023-11-05T11:26:31,551 Found link https://files.pythonhosted.org/packages/78/43/1dbd9816f26f28c8ea8e41109f7b55f3c29216ae9ee9faf3132455ee5900/capcruncher-0.1.0a2.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8), version: 0.1.0a2 2023-11-05T11:26:31,551 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/af/21/1bd19a95d650d782bd61f0617e2ade19b8ea9dfc2583d5188cf31fc9e2ac/capcruncher-0.1.1a0-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) 2023-11-05T11:26:31,552 Found link https://files.pythonhosted.org/packages/4b/58/8c4c26cb67c97bc632d4fd7df6b754a3d7d52d9224a12b5ef30f1551e18a/capcruncher-0.1.1a0.tar.gz (from https://pypi.org/simple/capcruncher/), version: 0.1.1a0 2023-11-05T11:26:31,553 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/09/3a/0d4e2559f5fcd1ea08ba4a59a2174bfa9b4e362fb6fbbeff57652bc8b43b/capcruncher-0.1.1a1-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) 2023-11-05T11:26:31,554 Found link https://files.pythonhosted.org/packages/fc/38/d9f3fbb589780a7116c60af23e14e0ffec82fa966bd6fac06494df1ff972/capcruncher-0.1.1a1.tar.gz (from https://pypi.org/simple/capcruncher/), version: 0.1.1a1 2023-11-05T11:26:31,554 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/d8/b8/f378ab302aba8e011a3548bc8e12ca018dd51bae5e175f2aeac9b7023dbe/capcruncher-0.2.0-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) 2023-11-05T11:26:31,555 Found link https://files.pythonhosted.org/packages/ab/85/07383d62359c33bab143b6f85173a09852963625a5c6e23bbfd5c54d81d4/capcruncher-0.2.0.tar.gz (from https://pypi.org/simple/capcruncher/), version: 0.2.0 2023-11-05T11:26:31,556 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/20/fb/21512e9e9259664564498669e39be1c06854d7b9a4b2c088d640dbaed48b/capcruncher-0.2.2-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) 2023-11-05T11:26:31,556 Found link https://files.pythonhosted.org/packages/d6/8a/d499689bfadfc8c5ad88d9403619ffd62fe9169a359c304a3ef25d368b1d/capcruncher-0.2.2.tar.gz (from https://pypi.org/simple/capcruncher/), version: 0.2.2 2023-11-05T11:26:31,557 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/37/32/8d0b33d160aeec619f8cc86611ac7771733f9a300176f3b7fbc5f94dc51a/capcruncher-0.2.3-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8) 2023-11-05T11:26:31,558 Found link https://files.pythonhosted.org/packages/e7/da/78b7ae1ccdca4a9c2a0abdd16e308facc1909da2e159ce2d565c05fad639/capcruncher-0.2.3.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8), version: 0.2.3 2023-11-05T11:26:31,559 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/26/e5/2b7ada507bb60d04dfafa0655d63edd3b82cdfb5476b8672acf0cb5477b9/capcruncher-0.3.1-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,560 Found link https://files.pythonhosted.org/packages/43/bd/2aabc1f9b8e2fae522852b4f3c8f27f42aadcf50016eb7bfcdfe83d499bb/capcruncher-0.3.1.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.1 2023-11-05T11:26:31,560 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/23/34/26f733de022f420176a15aaccb50dc49d6eac08dcf68d147f08d3abb257b/capcruncher-0.3.2-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,561 Found link https://files.pythonhosted.org/packages/b4/c4/a3c7065d7c993db2680c1303d40862031cc6e8535aca5b023ded383d4520/capcruncher-0.3.2.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.2 2023-11-05T11:26:31,562 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/80/d5/ae6f38bc4ec0724841406c0125296bad843a1ca2fe9e2dfce8bb73796ae5/capcruncher-0.3.3-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,563 Found link https://files.pythonhosted.org/packages/21/8f/8063b68decdfed76375774899994ce09bf6f2362453110d3a7e3091d0f47/capcruncher-0.3.3.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.3 2023-11-05T11:26:31,564 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/61/55/adac692b940cca0f453b760ec8c3be9b325e22afb8e8693717fcebd202c0/capcruncher-0.3.4-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,565 Found link https://files.pythonhosted.org/packages/b1/78/c98a2a4a6e62b5bd169af128129633b9e06bce32b0284b79c68808a8f0e5/capcruncher-0.3.4.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.4 2023-11-05T11:26:31,565 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/a7/b0/ed93710d654d62b661c227e5ab7cd4318633571b06cf746789710ca33465/capcruncher-0.3.5-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,566 Found link https://files.pythonhosted.org/packages/37/ea/966e9f14e18737107ed291ea6d3646f5a05e13a9566c2e70e0a7cd9ed172/capcruncher-0.3.5.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.5 2023-11-05T11:26:31,567 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/cc/da/a6eecab0a59ddc8666c9f015c4d7cd9314c786bcb2e0b0b8f13df74f9539/capcruncher-0.3.6-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,568 Found link https://files.pythonhosted.org/packages/8d/25/4ea99311a7e678a3d924cf4611164187869f203b08e6b6d528ab1109dfbf/capcruncher-0.3.6.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.6 2023-11-05T11:26:31,569 Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/1d/7a/11c7343f53cea8815a85c3c2158608e0250aee9ff3b2f8e0eeea95b74d1b/capcruncher-0.3.7-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,570 Found link https://files.pythonhosted.org/packages/ab/4d/f435f1d776649aa7bf1106777eff726289fafd0d38014043a3d8e960aa2b/capcruncher-0.3.7.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.7 2023-11-05T11:26:31,571 Fetching project page and analyzing links: https://www.piwheels.org/simple/capcruncher/ 2023-11-05T11:26:31,572 Getting page https://www.piwheels.org/simple/capcruncher/ 2023-11-05T11:26:31,573 Found index url https://www.piwheels.org/simple/ 2023-11-05T11:26:31,749 Fetched page https://www.piwheels.org/simple/capcruncher/ as text/html 2023-11-05T11:26:31,754 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.6-py3-none-any.whl#sha256=23a2d1c72b352805d9f9be1e5a4e44c51548843db7f756423e2b15b817a5c626 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,755 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.5-py3-none-any.whl#sha256=503c6a297520994543673dade8d1f543945f4696ee680a184d3f998ca2896c5b (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,755 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.4-py3-none-any.whl#sha256=1f430b5ce16f4b15f8b8c7eae415267929912ca0a78616fde3f593f9d458918e (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,756 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.3-py3-none-any.whl#sha256=a622eec10ed86905ffdc0d9696093c93ede9ae0280eb0979727ed05b78c6aeed (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,756 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.2-py3-none-any.whl#sha256=cb9bbb6e602e5e11dcbac280be5520518f0110c58eb9bc7937644b956c455a02 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,757 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.1-py3-none-any.whl#sha256=010cc17949484bec95ba588bf89f30d450d6476b8e7c612e14f32270db999b52 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10) 2023-11-05T11:26:31,757 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.2.3-py3-none-any.whl#sha256=3640a41566ec698430601c7ee8ff373d698ad995981fcb1564072cbdaadeaa70 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.8) 2023-11-05T11:26:31,758 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.2.2-py3-none-any.whl#sha256=696271de6a0cfb479ebe5c059b46015c0b54a4883b28fac6d3f60d3f10360694 (from https://www.piwheels.org/simple/capcruncher/) 2023-11-05T11:26:31,759 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.2.0-py3-none-any.whl#sha256=a376e09af30f629484777d94d245a0a18cdee37e332344294623f74a218de161 (from https://www.piwheels.org/simple/capcruncher/) 2023-11-05T11:26:31,759 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.1.1a1-py3-none-any.whl#sha256=45ad47d1025882de7d3ae2436f95d9c690fb55f4ad3320a464754782dd2a9ce8 (from https://www.piwheels.org/simple/capcruncher/) 2023-11-05T11:26:31,760 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.1.1a0-py3-none-any.whl#sha256=33582eed6498ac35fff342bc97adfeec48d012dca74e99a13b6c8ed596465d0d (from https://www.piwheels.org/simple/capcruncher/) 2023-11-05T11:26:31,760 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.1.0a2-py3-none-any.whl#sha256=a9cad04a0fa53e9864f02ac8641b704ba78bd0da1a8d83c5e84199e7ae183222 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.8) 2023-11-05T11:26:31,761 Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.1.0a1-py3-none-any.whl#sha256=8d0852e344db844525d67d074e33a0880f102073b0bdc5d77c2c3bd498ffee5b (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.8) 2023-11-05T11:26:31,762 Skipping link: not a file: https://www.piwheels.org/simple/capcruncher/ 2023-11-05T11:26:31,762 Skipping link: not a file: https://pypi.org/simple/capcruncher/ 2023-11-05T11:26:31,783 Given no hashes to check 1 links for project 'capcruncher': discarding no candidates 2023-11-05T11:26:31,803 Collecting capcruncher==0.3.7 2023-11-05T11:26:31,805 Created temporary directory: /tmp/pip-unpack-6pemky83 2023-11-05T11:26:32,039 Downloading capcruncher-0.3.7.tar.gz (84.8 MB) 2023-11-05T11:26:53,196 Added capcruncher==0.3.7 from https://files.pythonhosted.org/packages/ab/4d/f435f1d776649aa7bf1106777eff726289fafd0d38014043a3d8e960aa2b/capcruncher-0.3.7.tar.gz to build tracker '/tmp/pip-build-tracker-6m0iubcn' 2023-11-05T11:26:53,203 Created temporary directory: /tmp/pip-build-env-04kx4iv_ 2023-11-05T11:26:53,208 Installing build dependencies: started 2023-11-05T11:26:53,209 Running command pip subprocess to install build dependencies 2023-11-05T11:26:54,345 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-11-05T11:26:54,837 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-05T11:26:56,378 Collecting setuptools>=61.0 2023-11-05T11:26:56,441 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-11-05T11:26:56,682 Collecting wheel 2023-11-05T11:26:56,698 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.3-py3-none-any.whl (65 kB) 2023-11-05T11:26:56,993 Collecting setuptools_scm[toml]>=6.2 2023-11-05T11:26:57,009 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2023-11-05T11:26:57,359 Collecting packaging>=20 (from setuptools_scm[toml]>=6.2) 2023-11-05T11:26:57,375 Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB) 2023-11-05T11:26:57,489 Collecting typing-extensions (from setuptools_scm[toml]>=6.2) 2023-11-05T11:26:57,504 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.8.0-py3-none-any.whl (31 kB) 2023-11-05T11:27:00,018 Installing collected packages: wheel, typing-extensions, setuptools, packaging, setuptools_scm 2023-11-05T11:27:00,251 Creating /tmp/pip-build-env-04kx4iv_/overlay/local/bin 2023-11-05T11:27:00,253 changing mode of /tmp/pip-build-env-04kx4iv_/overlay/local/bin/wheel to 755 2023-11-05T11:27:02,880 Successfully installed packaging-23.2 setuptools-68.2.2 setuptools_scm-8.0.4 typing-extensions-4.8.0 wheel-0.41.3 2023-11-05T11:27:03,166 [notice] A new release of pip is available: 23.2.1 -> 23.3.1 2023-11-05T11:27:03,167 [notice] To update, run: python3 -m pip install --upgrade pip 2023-11-05T11:27:03,445 Installing build dependencies: finished with status 'done' 2023-11-05T11:27:03,449 Getting requirements to build wheel: started 2023-11-05T11:27:03,450 Running command Getting requirements to build wheel 2023-11-05T11:27:04,427 running egg_info 2023-11-05T11:27:04,432 writing capcruncher.egg-info/PKG-INFO 2023-11-05T11:27:04,439 writing dependency_links to capcruncher.egg-info/dependency_links.txt 2023-11-05T11:27:04,441 writing entry points to capcruncher.egg-info/entry_points.txt 2023-11-05T11:27:04,443 writing requirements to capcruncher.egg-info/requires.txt 2023-11-05T11:27:04,445 writing top-level names to capcruncher.egg-info/top_level.txt 2023-11-05T11:27:04,491 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-11-05T11:27:04,495 reading manifest file 'capcruncher.egg-info/SOURCES.txt' 2023-11-05T11:27:04,503 reading manifest template 'MANIFEST.in' 2023-11-05T11:27:04,534 adding license file 'LICENSE' 2023-11-05T11:27:04,543 writing manifest file 'capcruncher.egg-info/SOURCES.txt' 2023-11-05T11:27:04,665 Getting requirements to build wheel: finished with status 'done' 2023-11-05T11:27:04,682 Created temporary directory: /tmp/pip-modern-metadata-vonghd61 2023-11-05T11:27:04,685 Preparing metadata (pyproject.toml): started 2023-11-05T11:27:04,686 Running command Preparing metadata (pyproject.toml) 2023-11-05T11:27:05,548 running dist_info 2023-11-05T11:27:05,554 creating /tmp/pip-modern-metadata-vonghd61/capcruncher.egg-info 2023-11-05T11:27:05,560 writing /tmp/pip-modern-metadata-vonghd61/capcruncher.egg-info/PKG-INFO 2023-11-05T11:27:05,566 writing dependency_links to /tmp/pip-modern-metadata-vonghd61/capcruncher.egg-info/dependency_links.txt 2023-11-05T11:27:05,568 writing entry points to /tmp/pip-modern-metadata-vonghd61/capcruncher.egg-info/entry_points.txt 2023-11-05T11:27:05,571 writing requirements to /tmp/pip-modern-metadata-vonghd61/capcruncher.egg-info/requires.txt 2023-11-05T11:27:05,572 writing top-level names to /tmp/pip-modern-metadata-vonghd61/capcruncher.egg-info/top_level.txt 2023-11-05T11:27:05,573 writing manifest file '/tmp/pip-modern-metadata-vonghd61/capcruncher.egg-info/SOURCES.txt' 2023-11-05T11:27:05,614 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-11-05T11:27:05,617 reading manifest file '/tmp/pip-modern-metadata-vonghd61/capcruncher.egg-info/SOURCES.txt' 2023-11-05T11:27:05,619 reading manifest template 'MANIFEST.in' 2023-11-05T11:27:05,649 adding license file 'LICENSE' 2023-11-05T11:27:05,653 writing manifest file '/tmp/pip-modern-metadata-vonghd61/capcruncher.egg-info/SOURCES.txt' 2023-11-05T11:27:05,654 creating '/tmp/pip-modern-metadata-vonghd61/capcruncher-0.3.7.dist-info' 2023-11-05T11:27:05,826 Preparing metadata (pyproject.toml): finished with status 'done' 2023-11-05T11:27:05,839 Source in /tmp/pip-wheel-loe19zn2/capcruncher_60bb984c3e6c4ee385e8dbee49f9f8d5 has version 0.3.7, which satisfies requirement capcruncher==0.3.7 from https://files.pythonhosted.org/packages/ab/4d/f435f1d776649aa7bf1106777eff726289fafd0d38014043a3d8e960aa2b/capcruncher-0.3.7.tar.gz 2023-11-05T11:27:05,840 Removed capcruncher==0.3.7 from https://files.pythonhosted.org/packages/ab/4d/f435f1d776649aa7bf1106777eff726289fafd0d38014043a3d8e960aa2b/capcruncher-0.3.7.tar.gz from build tracker '/tmp/pip-build-tracker-6m0iubcn' 2023-11-05T11:27:05,860 Created temporary directory: /tmp/pip-unpack-tgdo6gmb 2023-11-05T11:27:05,861 Created temporary directory: /tmp/pip-unpack-6tteaomk 2023-11-05T11:27:05,919 Building wheels for collected packages: capcruncher 2023-11-05T11:27:05,923 Created temporary directory: /tmp/pip-wheel-vzrqo0su 2023-11-05T11:27:05,924 Destination directory: /tmp/pip-wheel-vzrqo0su 2023-11-05T11:27:05,926 Building wheel for capcruncher (pyproject.toml): started 2023-11-05T11:27:05,927 Running command Building wheel for capcruncher (pyproject.toml) 2023-11-05T11:27:06,757 running bdist_wheel 2023-11-05T11:27:06,780 running build 2023-11-05T11:27:06,780 running build_py 2023-11-05T11:27:06,786 creating build 2023-11-05T11:27:06,786 creating build/lib 2023-11-05T11:27:06,787 creating build/lib/capcruncher 2023-11-05T11:27:06,788 copying capcruncher/_version.py -> build/lib/capcruncher 2023-11-05T11:27:06,790 copying capcruncher/__init__.py -> build/lib/capcruncher 2023-11-05T11:27:06,792 copying capcruncher/utils.py -> build/lib/capcruncher 2023-11-05T11:27:06,795 creating build/lib/capcruncher/cli 2023-11-05T11:27:06,796 copying capcruncher/cli/cli_interactions.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,798 copying capcruncher/cli/fastq_digest.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,800 copying capcruncher/cli/interactions_differential.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,802 copying capcruncher/cli/interactions_deduplicate.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,804 copying capcruncher/cli/alignments_filter.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,806 copying capcruncher/cli/cli_genome.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,807 copying capcruncher/cli/alignments_annotate.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,809 copying capcruncher/cli/__init__.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,811 copying capcruncher/cli/cli_fastq.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,813 copying capcruncher/cli/cli_plot.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,814 copying capcruncher/cli/interactions_store.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,816 copying capcruncher/cli/plot.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,818 copying capcruncher/cli/fastq_deduplicate.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,820 copying capcruncher/cli/cli_alignments.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,822 copying capcruncher/cli/interactions_compare.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,823 copying capcruncher/cli/interactions_pileup.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,825 copying capcruncher/cli/genome_digest.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,827 copying capcruncher/cli/interactions_count.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,828 copying capcruncher/cli/cli_pipeline.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,830 copying capcruncher/cli/cli_utilities.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,832 copying capcruncher/cli/fastq_split.py -> build/lib/capcruncher/cli 2023-11-05T11:27:06,835 creating build/lib/capcruncher/pipeline 2023-11-05T11:27:06,836 copying capcruncher/pipeline/utils.py -> build/lib/capcruncher/pipeline 2023-11-05T11:27:06,839 creating build/lib/capcruncher/api 2023-11-05T11:27:06,840 copying capcruncher/api/storage.py -> build/lib/capcruncher/api 2023-11-05T11:27:06,843 copying capcruncher/api/pileup.py -> build/lib/capcruncher/api 2023-11-05T11:27:06,845 copying capcruncher/api/annotate.py -> build/lib/capcruncher/api 2023-11-05T11:27:06,847 copying capcruncher/api/__init__.py -> build/lib/capcruncher/api 2023-11-05T11:27:06,849 copying capcruncher/api/plotting.py -> build/lib/capcruncher/api 2023-11-05T11:27:06,851 copying capcruncher/api/statistics.py -> build/lib/capcruncher/api 2023-11-05T11:27:06,853 copying capcruncher/api/io.py -> build/lib/capcruncher/api 2023-11-05T11:27:06,856 copying capcruncher/api/filter.py -> build/lib/capcruncher/api 2023-11-05T11:27:06,858 copying capcruncher/api/deduplicate.py -> build/lib/capcruncher/api 2023-11-05T11:27:06,862 creating build/lib/capcruncher/pipeline/workflow 2023-11-05T11:27:06,862 creating build/lib/capcruncher/pipeline/workflow/report 2023-11-05T11:27:06,863 copying capcruncher/pipeline/workflow/report/make_report.py -> build/lib/capcruncher/pipeline/workflow/report 2023-11-05T11:27:06,867 creating build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,868 copying capcruncher/pipeline/workflow/scripts/identify_viewpoints_with_interactions.py -> build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,870 copying capcruncher/pipeline/workflow/scripts/remove_duplicate_coordinates.py -> build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,871 copying capcruncher/pipeline/workflow/scripts/validation_check_n_bins_per_viewpoint.py -> build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,873 copying capcruncher/pipeline/workflow/scripts/plot.py -> build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,875 copying capcruncher/pipeline/workflow/scripts/count_identified_viewpoints.py -> build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,876 copying capcruncher/pipeline/workflow/scripts/extract_trimming_data.py -> build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,878 copying capcruncher/pipeline/workflow/scripts/make_ucsc_hub.py -> build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,880 copying capcruncher/pipeline/workflow/scripts/validation_confirm_annotated_viewpoints_present.py -> build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,881 copying capcruncher/pipeline/workflow/scripts/extract_flash_data.py -> build/lib/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:06,884 running egg_info 2023-11-05T11:27:06,889 writing capcruncher.egg-info/PKG-INFO 2023-11-05T11:27:06,895 writing dependency_links to capcruncher.egg-info/dependency_links.txt 2023-11-05T11:27:06,896 writing entry points to capcruncher.egg-info/entry_points.txt 2023-11-05T11:27:06,899 writing requirements to capcruncher.egg-info/requires.txt 2023-11-05T11:27:06,900 writing top-level names to capcruncher.egg-info/top_level.txt 2023-11-05T11:27:06,931 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-11-05T11:27:06,934 reading manifest file 'capcruncher.egg-info/SOURCES.txt' 2023-11-05T11:27:06,940 reading manifest template 'MANIFEST.in' 2023-11-05T11:27:06,976 adding license file 'LICENSE' 2023-11-05T11:27:06,984 writing manifest file 'capcruncher.egg-info/SOURCES.txt' 2023-11-05T11:27:06,992 creating build/lib/capcruncher/data 2023-11-05T11:27:06,993 copying capcruncher/data/logo.txt -> build/lib/capcruncher/data 2023-11-05T11:27:06,995 copying capcruncher/pipeline/workflow/Snakefile -> build/lib/capcruncher/pipeline/workflow 2023-11-05T11:27:06,998 creating build/lib/capcruncher/pipeline/config 2023-11-05T11:27:06,998 copying capcruncher/pipeline/config/cookiecutter.json -> build/lib/capcruncher/pipeline/config 2023-11-05T11:27:07,001 creating build/lib/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}} 2023-11-05T11:27:07,001 copying capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}/capcruncher_config.yml -> build/lib/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}} 2023-11-05T11:27:07,004 creating build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,005 copying capcruncher/pipeline/workflow/rules/align.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,007 copying capcruncher/pipeline/workflow/rules/annotate.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,009 copying capcruncher/pipeline/workflow/rules/compare.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,012 copying capcruncher/pipeline/workflow/rules/digest.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,014 copying capcruncher/pipeline/workflow/rules/fastq.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,017 copying capcruncher/pipeline/workflow/rules/filter.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,019 copying capcruncher/pipeline/workflow/rules/pileup.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,022 copying capcruncher/pipeline/workflow/rules/qc.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,024 copying capcruncher/pipeline/workflow/rules/statistics.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,026 copying capcruncher/pipeline/workflow/rules/visualise.smk -> build/lib/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,028 creating build/lib/capcruncher/pipeline/workflow/envs 2023-11-05T11:27:07,029 copying capcruncher/pipeline/workflow/envs/environment.yml -> build/lib/capcruncher/pipeline/workflow/envs 2023-11-05T11:27:07,031 copying capcruncher/pipeline/workflow/report/capcruncher_report.qmd -> build/lib/capcruncher/pipeline/workflow/report 2023-11-05T11:27:07,034 copying capcruncher/pipeline/workflow/report/report_text.yml -> build/lib/capcruncher/pipeline/workflow/report 2023-11-05T11:27:07,037 creating build/lib/capcruncher/pipeline/workflow/data 2023-11-05T11:27:07,038 copying capcruncher/pipeline/workflow/data/annotation_defaults.json -> build/lib/capcruncher/pipeline/workflow/data 2023-11-05T11:27:07,040 creating build/lib/capcruncher/pipeline/workflow/envs/profiles 2023-11-05T11:27:07,040 creating build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_singularity 2023-11-05T11:27:07,041 copying capcruncher/pipeline/workflow/envs/profiles/profile_singularity/config.yaml -> build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_singularity 2023-11-05T11:27:07,043 creating build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity 2023-11-05T11:27:07,044 copying capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity/config.yaml -> build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity 2023-11-05T11:27:07,061 installing to build/bdist.linux-armv7l/wheel 2023-11-05T11:27:07,062 running install 2023-11-05T11:27:07,086 running install_lib 2023-11-05T11:27:07,091 creating build/bdist.linux-armv7l 2023-11-05T11:27:07,092 creating build/bdist.linux-armv7l/wheel 2023-11-05T11:27:07,093 creating build/bdist.linux-armv7l/wheel/capcruncher 2023-11-05T11:27:07,095 copying build/lib/capcruncher/_version.py -> build/bdist.linux-armv7l/wheel/capcruncher 2023-11-05T11:27:07,097 copying build/lib/capcruncher/__init__.py -> build/bdist.linux-armv7l/wheel/capcruncher 2023-11-05T11:27:07,099 creating build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,100 copying build/lib/capcruncher/cli/cli_interactions.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,102 copying build/lib/capcruncher/cli/fastq_digest.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,104 copying build/lib/capcruncher/cli/interactions_differential.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,107 copying build/lib/capcruncher/cli/interactions_deduplicate.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,109 copying build/lib/capcruncher/cli/alignments_filter.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,111 copying build/lib/capcruncher/cli/cli_genome.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,113 copying build/lib/capcruncher/cli/alignments_annotate.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,115 copying build/lib/capcruncher/cli/__init__.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,117 copying build/lib/capcruncher/cli/cli_fastq.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,119 copying build/lib/capcruncher/cli/cli_plot.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,121 copying build/lib/capcruncher/cli/interactions_store.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,123 copying build/lib/capcruncher/cli/plot.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,125 copying build/lib/capcruncher/cli/fastq_deduplicate.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,127 copying build/lib/capcruncher/cli/cli_alignments.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,129 copying build/lib/capcruncher/cli/interactions_compare.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,132 copying build/lib/capcruncher/cli/interactions_pileup.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,134 copying build/lib/capcruncher/cli/genome_digest.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,136 copying build/lib/capcruncher/cli/interactions_count.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,138 copying build/lib/capcruncher/cli/cli_pipeline.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,140 copying build/lib/capcruncher/cli/cli_utilities.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,142 copying build/lib/capcruncher/cli/fastq_split.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli 2023-11-05T11:27:07,145 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline 2023-11-05T11:27:07,146 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow 2023-11-05T11:27:07,148 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,149 copying build/lib/capcruncher/pipeline/workflow/rules/annotate.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,151 copying build/lib/capcruncher/pipeline/workflow/rules/qc.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,153 copying build/lib/capcruncher/pipeline/workflow/rules/visualise.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,155 copying build/lib/capcruncher/pipeline/workflow/rules/statistics.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,157 copying build/lib/capcruncher/pipeline/workflow/rules/align.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,159 copying build/lib/capcruncher/pipeline/workflow/rules/filter.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,161 copying build/lib/capcruncher/pipeline/workflow/rules/pileup.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,163 copying build/lib/capcruncher/pipeline/workflow/rules/compare.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,165 copying build/lib/capcruncher/pipeline/workflow/rules/digest.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,167 copying build/lib/capcruncher/pipeline/workflow/rules/fastq.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules 2023-11-05T11:27:07,170 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs 2023-11-05T11:27:07,171 copying build/lib/capcruncher/pipeline/workflow/envs/environment.yml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs 2023-11-05T11:27:07,174 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles 2023-11-05T11:27:07,176 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles/profile_singularity 2023-11-05T11:27:07,177 copying build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_singularity/config.yaml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles/profile_singularity 2023-11-05T11:27:07,180 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity 2023-11-05T11:27:07,181 copying build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity/config.yaml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity 2023-11-05T11:27:07,183 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/report 2023-11-05T11:27:07,184 copying build/lib/capcruncher/pipeline/workflow/report/make_report.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/report 2023-11-05T11:27:07,187 copying build/lib/capcruncher/pipeline/workflow/report/report_text.yml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/report 2023-11-05T11:27:07,189 copying build/lib/capcruncher/pipeline/workflow/report/capcruncher_report.qmd -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/report 2023-11-05T11:27:07,191 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,193 copying build/lib/capcruncher/pipeline/workflow/scripts/identify_viewpoints_with_interactions.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,195 copying build/lib/capcruncher/pipeline/workflow/scripts/remove_duplicate_coordinates.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,197 copying build/lib/capcruncher/pipeline/workflow/scripts/validation_check_n_bins_per_viewpoint.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,199 copying build/lib/capcruncher/pipeline/workflow/scripts/plot.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,201 copying build/lib/capcruncher/pipeline/workflow/scripts/count_identified_viewpoints.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,202 copying build/lib/capcruncher/pipeline/workflow/scripts/extract_trimming_data.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,204 copying build/lib/capcruncher/pipeline/workflow/scripts/make_ucsc_hub.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,206 copying build/lib/capcruncher/pipeline/workflow/scripts/validation_confirm_annotated_viewpoints_present.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,208 copying build/lib/capcruncher/pipeline/workflow/scripts/extract_flash_data.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts 2023-11-05T11:27:07,210 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/data 2023-11-05T11:27:07,211 copying build/lib/capcruncher/pipeline/workflow/data/annotation_defaults.json -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/data 2023-11-05T11:27:07,213 copying build/lib/capcruncher/pipeline/workflow/Snakefile -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow 2023-11-05T11:27:07,216 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/config 2023-11-05T11:27:07,217 creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}} 2023-11-05T11:27:07,218 copying build/lib/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}/capcruncher_config.yml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}} 2023-11-05T11:27:07,221 copying build/lib/capcruncher/pipeline/config/cookiecutter.json -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/config 2023-11-05T11:27:07,223 copying build/lib/capcruncher/pipeline/utils.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline 2023-11-05T11:27:07,231 creating build/bdist.linux-armv7l/wheel/capcruncher/data 2023-11-05T11:27:07,233 copying build/lib/capcruncher/data/logo.txt -> build/bdist.linux-armv7l/wheel/capcruncher/data 2023-11-05T11:27:07,235 copying build/lib/capcruncher/utils.py -> build/bdist.linux-armv7l/wheel/capcruncher 2023-11-05T11:27:07,237 creating build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,238 copying build/lib/capcruncher/api/storage.py -> build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,241 copying build/lib/capcruncher/api/pileup.py -> build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,244 copying build/lib/capcruncher/api/annotate.py -> build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,246 copying build/lib/capcruncher/api/__init__.py -> build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,248 copying build/lib/capcruncher/api/plotting.py -> build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,251 copying build/lib/capcruncher/api/statistics.py -> build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,253 copying build/lib/capcruncher/api/io.py -> build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,256 copying build/lib/capcruncher/api/filter.py -> build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,259 copying build/lib/capcruncher/api/deduplicate.py -> build/bdist.linux-armv7l/wheel/capcruncher/api 2023-11-05T11:27:07,261 running install_egg_info 2023-11-05T11:27:07,266 Copying capcruncher.egg-info to build/bdist.linux-armv7l/wheel/capcruncher-0.3.7-py3.11.egg-info 2023-11-05T11:27:07,279 running install_scripts 2023-11-05T11:27:07,309 creating build/bdist.linux-armv7l/wheel/capcruncher-0.3.7.dist-info/WHEEL 2023-11-05T11:27:07,311 creating '/tmp/pip-wheel-vzrqo0su/.tmp-gbt94s3d/capcruncher-0.3.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-05T11:27:07,313 adding 'capcruncher/__init__.py' 2023-11-05T11:27:07,314 adding 'capcruncher/_version.py' 2023-11-05T11:27:07,317 adding 'capcruncher/utils.py' 2023-11-05T11:27:07,319 adding 'capcruncher/api/__init__.py' 2023-11-05T11:27:07,321 adding 'capcruncher/api/annotate.py' 2023-11-05T11:27:07,322 adding 'capcruncher/api/deduplicate.py' 2023-11-05T11:27:07,326 adding 'capcruncher/api/filter.py' 2023-11-05T11:27:07,329 adding 'capcruncher/api/io.py' 2023-11-05T11:27:07,331 adding 'capcruncher/api/pileup.py' 2023-11-05T11:27:07,334 adding 'capcruncher/api/plotting.py' 2023-11-05T11:27:07,336 adding 'capcruncher/api/statistics.py' 2023-11-05T11:27:07,339 adding 'capcruncher/api/storage.py' 2023-11-05T11:27:07,341 adding 'capcruncher/cli/__init__.py' 2023-11-05T11:27:07,342 adding 'capcruncher/cli/alignments_annotate.py' 2023-11-05T11:27:07,344 adding 'capcruncher/cli/alignments_filter.py' 2023-11-05T11:27:07,345 adding 'capcruncher/cli/cli_alignments.py' 2023-11-05T11:27:07,347 adding 'capcruncher/cli/cli_fastq.py' 2023-11-05T11:27:07,348 adding 'capcruncher/cli/cli_genome.py' 2023-11-05T11:27:07,350 adding 'capcruncher/cli/cli_interactions.py' 2023-11-05T11:27:07,351 adding 'capcruncher/cli/cli_pipeline.py' 2023-11-05T11:27:07,353 adding 'capcruncher/cli/cli_plot.py' 2023-11-05T11:27:07,355 adding 'capcruncher/cli/cli_utilities.py' 2023-11-05T11:27:07,356 adding 'capcruncher/cli/fastq_deduplicate.py' 2023-11-05T11:27:07,357 adding 'capcruncher/cli/fastq_digest.py' 2023-11-05T11:27:07,359 adding 'capcruncher/cli/fastq_split.py' 2023-11-05T11:27:07,360 adding 'capcruncher/cli/genome_digest.py' 2023-11-05T11:27:07,362 adding 'capcruncher/cli/interactions_compare.py' 2023-11-05T11:27:07,363 adding 'capcruncher/cli/interactions_count.py' 2023-11-05T11:27:07,364 adding 'capcruncher/cli/interactions_deduplicate.py' 2023-11-05T11:27:07,366 adding 'capcruncher/cli/interactions_differential.py' 2023-11-05T11:27:07,368 adding 'capcruncher/cli/interactions_pileup.py' 2023-11-05T11:27:07,370 adding 'capcruncher/cli/interactions_store.py' 2023-11-05T11:27:07,371 adding 'capcruncher/cli/plot.py' 2023-11-05T11:27:07,373 adding 'capcruncher/data/logo.txt' 2023-11-05T11:27:07,375 adding 'capcruncher/pipeline/utils.py' 2023-11-05T11:27:07,377 adding 'capcruncher/pipeline/config/cookiecutter.json' 2023-11-05T11:27:07,380 adding 'capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}/capcruncher_config.yml' 2023-11-05T11:27:07,382 adding 'capcruncher/pipeline/workflow/Snakefile' 2023-11-05T11:27:07,383 adding 'capcruncher/pipeline/workflow/data/annotation_defaults.json' 2023-11-05T11:27:07,385 adding 'capcruncher/pipeline/workflow/envs/environment.yml' 2023-11-05T11:27:07,387 adding 'capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity/config.yaml' 2023-11-05T11:27:07,389 adding 'capcruncher/pipeline/workflow/envs/profiles/profile_singularity/config.yaml' 2023-11-05T11:27:07,392 adding 'capcruncher/pipeline/workflow/report/capcruncher_report.qmd' 2023-11-05T11:27:07,394 adding 'capcruncher/pipeline/workflow/report/make_report.py' 2023-11-05T11:27:07,396 adding 'capcruncher/pipeline/workflow/report/report_text.yml' 2023-11-05T11:27:07,398 adding 'capcruncher/pipeline/workflow/rules/align.smk' 2023-11-05T11:27:07,399 adding 'capcruncher/pipeline/workflow/rules/annotate.smk' 2023-11-05T11:27:07,401 adding 'capcruncher/pipeline/workflow/rules/compare.smk' 2023-11-05T11:27:07,402 adding 'capcruncher/pipeline/workflow/rules/digest.smk' 2023-11-05T11:27:07,403 adding 'capcruncher/pipeline/workflow/rules/fastq.smk' 2023-11-05T11:27:07,405 adding 'capcruncher/pipeline/workflow/rules/filter.smk' 2023-11-05T11:27:07,406 adding 'capcruncher/pipeline/workflow/rules/pileup.smk' 2023-11-05T11:27:07,407 adding 'capcruncher/pipeline/workflow/rules/qc.smk' 2023-11-05T11:27:07,408 adding 'capcruncher/pipeline/workflow/rules/statistics.smk' 2023-11-05T11:27:07,409 adding 'capcruncher/pipeline/workflow/rules/visualise.smk' 2023-11-05T11:27:07,411 adding 'capcruncher/pipeline/workflow/scripts/count_identified_viewpoints.py' 2023-11-05T11:27:07,412 adding 'capcruncher/pipeline/workflow/scripts/extract_flash_data.py' 2023-11-05T11:27:07,413 adding 'capcruncher/pipeline/workflow/scripts/extract_trimming_data.py' 2023-11-05T11:27:07,414 adding 'capcruncher/pipeline/workflow/scripts/identify_viewpoints_with_interactions.py' 2023-11-05T11:27:07,416 adding 'capcruncher/pipeline/workflow/scripts/make_ucsc_hub.py' 2023-11-05T11:27:07,417 adding 'capcruncher/pipeline/workflow/scripts/plot.py' 2023-11-05T11:27:07,418 adding 'capcruncher/pipeline/workflow/scripts/remove_duplicate_coordinates.py' 2023-11-05T11:27:07,419 adding 'capcruncher/pipeline/workflow/scripts/validation_check_n_bins_per_viewpoint.py' 2023-11-05T11:27:07,421 adding 'capcruncher/pipeline/workflow/scripts/validation_confirm_annotated_viewpoints_present.py' 2023-11-05T11:27:07,427 adding 'capcruncher-0.3.7.dist-info/LICENSE' 2023-11-05T11:27:07,435 adding 'capcruncher-0.3.7.dist-info/METADATA' 2023-11-05T11:27:07,436 adding 'capcruncher-0.3.7.dist-info/WHEEL' 2023-11-05T11:27:07,437 adding 'capcruncher-0.3.7.dist-info/entry_points.txt' 2023-11-05T11:27:07,438 adding 'capcruncher-0.3.7.dist-info/top_level.txt' 2023-11-05T11:27:07,440 adding 'capcruncher-0.3.7.dist-info/RECORD' 2023-11-05T11:27:07,443 removing build/bdist.linux-armv7l/wheel 2023-11-05T11:27:07,591 Building wheel for capcruncher (pyproject.toml): finished with status 'done' 2023-11-05T11:27:07,598 Created wheel for capcruncher: filename=capcruncher-0.3.7-py3-none-any.whl size=147549 sha256=d15704bfb0f2dc274bbc338b3a0f85b92bb348467d04d6c6a91c00614f643ab6 2023-11-05T11:27:07,600 Stored in directory: /tmp/pip-ephem-wheel-cache-x5oiqhav/wheels/7d/2b/f5/26194cf8dded622e504897a80c3782cb141d7838f1d9d35703 2023-11-05T11:27:07,635 Successfully built capcruncher 2023-11-05T11:27:07,642 Removed build tracker: '/tmp/pip-build-tracker-6m0iubcn'