2023-11-10T22:26:24,052 Created temporary directory: /tmp/pip-build-tracker-fzp_xtz2
2023-11-10T22:26:24,054 Initialized build tracking at /tmp/pip-build-tracker-fzp_xtz2
2023-11-10T22:26:24,054 Created build tracker: /tmp/pip-build-tracker-fzp_xtz2
2023-11-10T22:26:24,055 Entered build tracker: /tmp/pip-build-tracker-fzp_xtz2
2023-11-10T22:26:24,056 Created temporary directory: /tmp/pip-wheel-mkhovt8k
2023-11-10T22:26:24,062 Created temporary directory: /tmp/pip-ephem-wheel-cache-8eti_d6k
2023-11-10T22:26:24,092 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-11-10T22:26:24,096 2 location(s) to search for versions of moleculekit:
2023-11-10T22:26:24,096 * https://pypi.org/simple/moleculekit/
2023-11-10T22:26:24,096 * https://www.piwheels.org/simple/moleculekit/
2023-11-10T22:26:24,096 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2023-11-10T22:26:24,096 Getting page https://pypi.org/simple/moleculekit/
2023-11-10T22:26:24,098 Found index url https://pypi.org/simple/
2023-11-10T22:26:24,151 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2023-11-10T22:26:24,190   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,191   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2023-11-10T22:26:24,191   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,191   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2023-11-10T22:26:24,191   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,192   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2023-11-10T22:26:24,192   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,192   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2023-11-10T22:26:24,192   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,193   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2023-11-10T22:26:24,193   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,193   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2023-11-10T22:26:24,193   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,194   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2023-11-10T22:26:24,194   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,194   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2023-11-10T22:26:24,194   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,195   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2023-11-10T22:26:24,195   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,195   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2023-11-10T22:26:24,195   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,196   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2023-11-10T22:26:24,196   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,196   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2023-11-10T22:26:24,196   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,196   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2023-11-10T22:26:24,197   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,197   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2023-11-10T22:26:24,197   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,197   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2023-11-10T22:26:24,198   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,198   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2023-11-10T22:26:24,198   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,198   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2023-11-10T22:26:24,199   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,199   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2023-11-10T22:26:24,199   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,199   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2023-11-10T22:26:24,199   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,200   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2023-11-10T22:26:24,200   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,200   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2023-11-10T22:26:24,200   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,201   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2023-11-10T22:26:24,201   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,201   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2023-11-10T22:26:24,201   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,202   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2023-11-10T22:26:24,202   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,202   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2023-11-10T22:26:24,202   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,202   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2023-11-10T22:26:24,203   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,203   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2023-11-10T22:26:24,203   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,203   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2023-11-10T22:26:24,204   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,204   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2023-11-10T22:26:24,204   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,204   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2023-11-10T22:26:24,204   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,205   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2023-11-10T22:26:24,205   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2023-11-10T22:26:24,205   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2023-11-10T22:26:24,205   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
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2023-11-10T22:26:24,228   Found link https://files.pythonhosted.org/packages/09/29/7e58bdf57dda487be8ab4c3719ebbf31db17ad65232fc9305a20eaa3c90c/moleculekit-1.1.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.0
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2023-11-10T22:26:24,228   Found link https://files.pythonhosted.org/packages/15/f8/fb94ef622b57eea44916cbed8a838efcbbd62c9732879ec4864c3abaf3d0/moleculekit-1.1.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.2
2023-11-10T22:26:24,228   Found link https://files.pythonhosted.org/packages/85/87/2264a91838fc8d44f1661b9ae462976e2b9b23f002591db7be9287f51d43/moleculekit-1.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.4
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2023-11-10T22:26:24,229   Found link https://files.pythonhosted.org/packages/eb/2e/c50f42aefc5f3510073bd5059723baff738a5ee171174441586000c444dc/moleculekit-1.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.8
2023-11-10T22:26:24,229   Found link https://files.pythonhosted.org/packages/59/b9/6e9913fc67fa6321d5c441eb59a93e257f1fba383848a6bd645a7d427045/moleculekit-1.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.9
2023-11-10T22:26:24,230   Found link https://files.pythonhosted.org/packages/06/90/69685dad023515e231d8da7747793f33c497bb62496c4075e518f230da55/moleculekit-1.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.0
2023-11-10T22:26:24,230   Found link https://files.pythonhosted.org/packages/1a/07/36426e9820ea0ecff884e15fc9ebe413735a2b22a9212cdcbb9b62e56744/moleculekit-1.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.1
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2023-11-10T22:26:24,231   Found link https://files.pythonhosted.org/packages/39/b3/50e46e2780075c4adf93bba603ad047457f3d9cd70a77f4909776ec446b3/moleculekit-1.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.7
2023-11-10T22:26:24,231   Found link https://files.pythonhosted.org/packages/29/f1/10cd916b3024b2efe08c06413dff5938859e01c8bc671cde8bf070758031/moleculekit-1.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.8
2023-11-10T22:26:24,231   Found link https://files.pythonhosted.org/packages/47/55/207179562e46a3cba4a1cb813c1754be6c5a1664a11d1dcffe89b51c1ca4/moleculekit-1.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.9
2023-11-10T22:26:24,232   Found link https://files.pythonhosted.org/packages/2e/1c/a07b4d5f471fc90ba12e88e44675ddbf0ba4b0a658c2fc014491a7a27092/moleculekit-1.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.0
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2023-11-10T22:26:24,233   Found link https://files.pythonhosted.org/packages/1a/fd/3788664397288c8169d713da13ae2419a0534a9ee826d1ce718811e27569/moleculekit-1.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.8
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2023-11-10T22:26:24,237   Found link https://files.pythonhosted.org/packages/0b/22/49372d8ecca8baa50e08ca3971786e207825556920bd5b19697d085bf681/moleculekit-1.4.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.9
2023-11-10T22:26:24,238   Found link https://files.pythonhosted.org/packages/3a/52/c87b6f8651063e38a723e8506788475ecf32f2b2e67fcf42739e8737f120/moleculekit-1.5.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.0
2023-11-10T22:26:24,238   Found link https://files.pythonhosted.org/packages/e9/64/50b82745c79e8f28fb8c1615e637221dceb4af565af8e785b04b5c9bd7f0/moleculekit-1.5.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.1
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2023-11-10T22:26:24,240   Found link https://files.pythonhosted.org/packages/3f/e8/860f3b89afd29b5ba405ab028f3d49ac22e95557b6b906e475c2f6558df5/moleculekit-1.5.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.3
2023-11-10T22:26:24,240   Found link https://files.pythonhosted.org/packages/e7/1e/8f982d3446852e3778250fc8af491eb3ceaf081b891eb7a4936776dfe730/moleculekit-1.5.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.4
2023-11-10T22:26:24,241   Found link https://files.pythonhosted.org/packages/46/81/f7be4e086eb469d0fda5d9be51c6fe2107d39c4127f64218774c40f5923a/moleculekit-1.5.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.5
2023-11-10T22:26:24,241   Found link https://files.pythonhosted.org/packages/d1/99/5866f661f25b1168804a5c26ab38edd26a7239d91b84c13fb129c1f84ab6/moleculekit-1.5.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.6
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2023-11-10T22:26:24,248   Found link https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.2
2023-11-10T22:26:24,249   Found link https://files.pythonhosted.org/packages/c7/cb/205d8925276863e2892c2c1ae2747cd4834cd3f174521172670ce43b50b8/moleculekit-1.7.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.3
2023-11-10T22:26:24,249   Found link https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.4
2023-11-10T22:26:24,250   Found link https://files.pythonhosted.org/packages/fa/63/993d55964a5afc9417ca31ab06a7d08f10b8fb38c63157bef0f350b4bb49/moleculekit-1.7.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.6
2023-11-10T22:26:24,250   Found link https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.7
2023-11-10T22:26:24,251   Found link https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.8
2023-11-10T22:26:24,251   Found link https://files.pythonhosted.org/packages/05/e0/64dd3801f9b9cd011f8093d85201df3b259bab3502b87b6e37edadea0f21/moleculekit-1.7.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.9
2023-11-10T22:26:24,252   Found link https://files.pythonhosted.org/packages/0e/fd/650680f6dcf164b179c8a334c56fc7ba97d71519330f03bdc485307b6a0d/moleculekit-1.7.10.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.10
2023-11-10T22:26:24,253   Found link https://files.pythonhosted.org/packages/37/05/3105db0d4a63b49d0f4534b5e9d6a488b96b83b3aac621224338f3a6aa6b/moleculekit-1.7.12.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.12
2023-11-10T22:26:24,253   Found link https://files.pythonhosted.org/packages/08/ec/48d8122fea93c59592ae22dc29f16496087cdf31064793e6da173fcf2e36/moleculekit-1.7.13.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.13
2023-11-10T22:26:24,254   Found link https://files.pythonhosted.org/packages/46/79/442f4846c44e99a4e5d61b09e65cb57ec69b24ae4bf7e8b704f125238c6c/moleculekit-1.7.14.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.14
2023-11-10T22:26:24,254   Found link https://files.pythonhosted.org/packages/fa/fd/aa5c1911df4cf3bee9575fbc1cdbd39bcb1d9164e77c772fa938be672cc0/moleculekit-1.7.15.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.15
2023-11-10T22:26:24,255   Found link https://files.pythonhosted.org/packages/38/fe/74b265e75deb09844035690d506614163cd262a2d6bc7c83b4e2f28d4bb9/moleculekit-1.7.16.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.16
2023-11-10T22:26:24,255   Found link https://files.pythonhosted.org/packages/8b/2f/56c308933a9652bc40c41a53d57509ef38cc3c21d55b6f5570c2d9a865ed/moleculekit-1.7.17.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.17
2023-11-10T22:26:24,256   Found link https://files.pythonhosted.org/packages/96/a3/11b655506ce842ebea0b6d4c86883a538095687cb7bc9c4a179420971bd7/moleculekit-1.8.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.1
2023-11-10T22:26:24,256   Found link https://files.pythonhosted.org/packages/9d/d3/ead35117c0f3b3b1be847d561ff31bf59dfde0c49982bff106a3cc3876f0/moleculekit-1.8.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.2
2023-11-10T22:26:24,257   Found link https://files.pythonhosted.org/packages/23/e8/3ebe2bfb667296b1c79d4e59fdfb487116bfd8bec579ca242eec7ecad0c2/moleculekit-1.8.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.3
2023-11-10T22:26:24,257   Found link https://files.pythonhosted.org/packages/6f/4d/4a0e90a65d79829ae0bec8d857de2f8b7e18b6d60e05daa99cdbed0061c0/moleculekit-1.8.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.4
2023-11-10T22:26:24,258   Found link https://files.pythonhosted.org/packages/15/bb/f88884d7710aeb6290c69f180df912ce73beb4975ceea9f58aa28250737c/moleculekit-1.8.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.5
2023-11-10T22:26:24,259   Found link https://files.pythonhosted.org/packages/e4/a8/ef9f25e6e42436ceaecfd8bb0aadbf40855976374a46b8cf8d55000fa0a8/moleculekit-1.8.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.6
2023-11-10T22:26:24,259   Found link https://files.pythonhosted.org/packages/67/c5/ed682f5ea9a16915b98612e0b274b50303bb912ccb71ab106247e01be8c2/moleculekit-1.8.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.7
2023-11-10T22:26:24,260 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2023-11-10T22:26:24,260 Getting page https://www.piwheels.org/simple/moleculekit/
2023-11-10T22:26:24,261 Found index url https://www.piwheels.org/simple/
2023-11-10T22:26:24,335 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
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2023-11-10T22:26:24,439   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
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2023-11-10T22:26:24,439   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,439   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,439   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,440   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,440   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,440   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,440   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
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2023-11-10T22:26:24,441   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
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2023-11-10T22:26:24,441   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,442   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,442   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,442   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,442   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,442   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,442   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,443   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,443   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,443   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,443   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,443   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,444   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,444   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,444   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,444   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,444   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,444   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,445   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,445   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,445   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,445   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,445   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,446   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,446   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,446   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,446   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,446   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,447   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,447   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,447   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv7l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,447   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv6l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,447   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv7l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,447   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv6l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,448   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv7l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,448   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv6l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,448   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,448   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv6l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,448   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv7l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,449   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv6l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,449   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv7l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,449   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv6l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,449   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv7l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,449   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv6l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,449   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv7l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,450   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv6l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
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2023-11-10T22:26:24,461   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.8-py3-none-any.whl#sha256=716d25ae18a4a9a3c8cfb1f0b0399f72463490e4f85a66631f3e77c0ddc427e3 (from https://www.piwheels.org/simple/moleculekit/)
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2023-11-10T22:26:24,462   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.6-py3-none-any.whl#sha256=0a288cd1efd660482dcc967caed02315dd8f02c19a0287eee0b8519d761db1b3 (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,462   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.5-py3-none-any.whl#sha256=2f111e31b3f90e63ca0154c528585208b8bd41a065aa0078325683f4b36eacec (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,462   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.4-py3-none-any.whl#sha256=5784491ff294e145a00311f8239aaa0b92c12605db0508ee3e10469b80d4cadd (from https://www.piwheels.org/simple/moleculekit/)
2023-11-10T22:26:24,462 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2023-11-10T22:26:24,463 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2023-11-10T22:26:24,503 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2023-11-10T22:26:24,521 Collecting moleculekit==1.8.7
2023-11-10T22:26:24,523   Created temporary directory: /tmp/pip-unpack-bq9vh_u_
2023-11-10T22:26:24,567   Downloading moleculekit-1.8.7.tar.gz (6.2 MB)
2023-11-10T22:26:26,467   Added moleculekit==1.8.7 from https://files.pythonhosted.org/packages/67/c5/ed682f5ea9a16915b98612e0b274b50303bb912ccb71ab106247e01be8c2/moleculekit-1.8.7.tar.gz to build tracker '/tmp/pip-build-tracker-fzp_xtz2'
2023-11-10T22:26:26,476   Created temporary directory: /tmp/pip-build-env-tv9xdlxz
2023-11-10T22:26:26,486   Installing build dependencies: started
2023-11-10T22:26:26,487   Running command pip subprocess to install build dependencies
2023-11-10T22:26:27,667   Using pip 23.3 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-11-10T22:26:28,207   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-11-10T22:26:29,635   Collecting setuptools
2023-11-10T22:26:29,650     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-11-10T22:26:30,604   Collecting numpy>=1.18.5
2023-11-10T22:26:30,625     Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.1-cp39-cp39-linux_armv7l.whl (19.4 MB)
2023-11-10T22:26:32,367   Collecting Cython>=0.29.21
2023-11-10T22:26:32,427     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.5-cp39-cp39-linux_armv7l.whl (10.7 MB)
2023-11-10T22:26:32,852   Collecting toml
2023-11-10T22:26:32,869     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2023-11-10T22:26:33,119   Collecting versioneer==0.28 (from versioneer[toml]==0.28)
2023-11-10T22:26:33,225     Using cached https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
2023-11-10T22:26:33,397   Collecting tomli (from versioneer[toml]==0.28)
2023-11-10T22:26:33,465     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-11-10T22:26:35,471   Installing collected packages: versioneer, tomli, toml, setuptools, numpy, Cython
2023-11-10T22:26:35,508     Creating /tmp/pip-build-env-tv9xdlxz/overlay/bin
2023-11-10T22:26:35,510     changing mode of /tmp/pip-build-env-tv9xdlxz/overlay/bin/versioneer to 755
2023-11-10T22:26:45,892     changing mode of /tmp/pip-build-env-tv9xdlxz/overlay/bin/f2py to 755
2023-11-10T22:26:49,248     changing mode of /tmp/pip-build-env-tv9xdlxz/overlay/bin/cygdb to 755
2023-11-10T22:26:49,250     changing mode of /tmp/pip-build-env-tv9xdlxz/overlay/bin/cython to 755
2023-11-10T22:26:49,252     changing mode of /tmp/pip-build-env-tv9xdlxz/overlay/bin/cythonize to 755
2023-11-10T22:26:49,276   ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts.
2023-11-10T22:26:49,277   scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.26.1 which is incompatible.
2023-11-10T22:26:49,277   Successfully installed Cython-3.0.5 numpy-1.26.1 setuptools-68.2.2 toml-0.10.2 tomli-2.0.1 versioneer-0.28
2023-11-10T22:26:49,462   WARNING: There was an error checking the latest version of pip.
2023-11-10T22:26:49,905   Installing build dependencies: finished with status 'done'
2023-11-10T22:26:49,910   Getting requirements to build wheel: started
2023-11-10T22:26:49,911   Running command Getting requirements to build wheel
2023-11-10T22:27:23,091   warning: moleculekit/wrapping/wrapping.pyx:47:4: Unreachable code
2023-11-10T22:27:29,000   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,001   Compiling moleculekit/interactions/pipi/pipi.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,001   Compiling moleculekit/interactions/cationpi/cationpi.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,001   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,001   Compiling moleculekit/wrapping/wrapping.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,001   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,001   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,001   Compiling moleculekit/distance_utils/distance_utils.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,001   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,002   Compiling moleculekit/xtc_utils/xtc.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2023-11-10T22:27:29,002   Compiling moleculekit/tmalign/tmalign_util.pyx because it depends on /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2023-11-10T22:27:29,002   [ 1/11] Cythonizing moleculekit/atomselect_utils/atomselect_utils.pyx
2023-11-10T22:27:29,002   [ 2/11] Cythonizing moleculekit/bondguesser_utils/bondguesser_utils.pyx
2023-11-10T22:27:29,002   [ 3/11] Cythonizing moleculekit/distance_utils/distance_utils.pyx
2023-11-10T22:27:29,002   [ 4/11] Cythonizing moleculekit/interactions/cationpi/cationpi.pyx
2023-11-10T22:27:29,002   [ 5/11] Cythonizing moleculekit/interactions/hbonds/hbonds.pyx
2023-11-10T22:27:29,002   [ 6/11] Cythonizing moleculekit/interactions/pipi/pipi.pyx
2023-11-10T22:27:29,003   [ 7/11] Cythonizing moleculekit/interactions/sigmahole/sigmahole.pyx
2023-11-10T22:27:29,003   [ 8/11] Cythonizing moleculekit/occupancy_utils/occupancy_utils.pyx
2023-11-10T22:27:29,003   [ 9/11] Cythonizing moleculekit/tmalign/tmalign_util.pyx
2023-11-10T22:27:29,003   [10/11] Cythonizing moleculekit/wrapping/wrapping.pyx
2023-11-10T22:27:29,003   [11/11] Cythonizing moleculekit/xtc_utils/xtc.pyx
2023-11-10T22:27:29,285   running egg_info
2023-11-10T22:27:29,294   writing moleculekit.egg-info/PKG-INFO
2023-11-10T22:27:29,298   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-11-10T22:27:29,300   writing requirements to moleculekit.egg-info/requires.txt
2023-11-10T22:27:29,302   writing top-level names to moleculekit.egg-info/top_level.txt
2023-11-10T22:27:29,325   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,326   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,326   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,327   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,327   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,327   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,328   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,328   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,328   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,329   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,329   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,329   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,330   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,330   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,330   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,331   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,331   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,331   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,332   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,332   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,332   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,333   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,333   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,333   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,334   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,334   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,334   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,334   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,335   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,335   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,336   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,336   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,336   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,336   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,337   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,337   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,337   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,338   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,338   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,338   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,339   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,339   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,339   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,340   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,340   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,340   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,341   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,341   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,341   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,342   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,343   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,343   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,343   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,344   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,344   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:29,352   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-11-10T22:27:29,383   reading manifest template 'MANIFEST.in'
2023-11-10T22:27:29,625   no previously-included directories found matching 'moleculekit/test-data'
2023-11-10T22:27:29,626   no previously-included directories found matching 'moleculekit/tests'
2023-11-10T22:27:29,628   no previously-included directories found matching 'package'
2023-11-10T22:27:29,628   adding license file 'LICENSE'
2023-11-10T22:27:29,645   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-11-10T22:27:30,814   Getting requirements to build wheel: finished with status 'done'
2023-11-10T22:27:30,830   Installing backend dependencies: started
2023-11-10T22:27:30,831   Running command pip subprocess to install backend dependencies
2023-11-10T22:27:32,074   Using pip 23.3 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-11-10T22:27:32,650   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-11-10T22:27:33,001   Collecting wheel
2023-11-10T22:27:33,017     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.3-py3-none-any.whl (65 kB)
2023-11-10T22:27:34,639   Installing collected packages: wheel
2023-11-10T22:27:34,857     Creating /tmp/pip-build-env-tv9xdlxz/normal/bin
2023-11-10T22:27:34,859     changing mode of /tmp/pip-build-env-tv9xdlxz/normal/bin/wheel to 755
2023-11-10T22:27:34,871   Successfully installed wheel-0.41.3
2023-11-10T22:27:35,055   WARNING: There was an error checking the latest version of pip.
2023-11-10T22:27:35,274   Installing backend dependencies: finished with status 'done'
2023-11-10T22:27:35,276   Created temporary directory: /tmp/pip-modern-metadata-8jwn6l_s
2023-11-10T22:27:35,279   Preparing metadata (pyproject.toml): started
2023-11-10T22:27:35,280   Running command Preparing metadata (pyproject.toml)
2023-11-10T22:27:37,661   running dist_info
2023-11-10T22:27:37,663   creating /tmp/pip-modern-metadata-8jwn6l_s/moleculekit.egg-info
2023-11-10T22:27:37,669   writing /tmp/pip-modern-metadata-8jwn6l_s/moleculekit.egg-info/PKG-INFO
2023-11-10T22:27:37,673   writing dependency_links to /tmp/pip-modern-metadata-8jwn6l_s/moleculekit.egg-info/dependency_links.txt
2023-11-10T22:27:37,675   writing requirements to /tmp/pip-modern-metadata-8jwn6l_s/moleculekit.egg-info/requires.txt
2023-11-10T22:27:37,676   writing top-level names to /tmp/pip-modern-metadata-8jwn6l_s/moleculekit.egg-info/top_level.txt
2023-11-10T22:27:37,678   writing manifest file '/tmp/pip-modern-metadata-8jwn6l_s/moleculekit.egg-info/SOURCES.txt'
2023-11-10T22:27:37,702   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,702   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,702   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,703   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,703   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,703   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,703   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,703   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,703   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,703   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,704   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,704   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,704   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,704   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,704   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,704   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,704   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,704   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,705   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,705   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,705   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,705   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,705   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,705   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,705   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,706   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,706   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,706   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,706   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,706   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,706   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,706   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,706   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,707   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,707   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,707   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,707   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,707   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,707   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,707   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,707   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,708   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,708   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,708   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,708   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,708   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,708   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,708   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,708   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,709   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,709   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,709   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,709   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,709   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,709   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:37,716   reading manifest file '/tmp/pip-modern-metadata-8jwn6l_s/moleculekit.egg-info/SOURCES.txt'
2023-11-10T22:27:37,718   reading manifest template 'MANIFEST.in'
2023-11-10T22:27:37,955   no previously-included directories found matching 'moleculekit/test-data'
2023-11-10T22:27:37,955   no previously-included directories found matching 'moleculekit/tests'
2023-11-10T22:27:37,956   no previously-included directories found matching 'package'
2023-11-10T22:27:37,956   adding license file 'LICENSE'
2023-11-10T22:27:37,968   writing manifest file '/tmp/pip-modern-metadata-8jwn6l_s/moleculekit.egg-info/SOURCES.txt'
2023-11-10T22:27:37,977   creating '/tmp/pip-modern-metadata-8jwn6l_s/moleculekit-1.8.7.dist-info'
2023-11-10T22:27:38,175   Preparing metadata (pyproject.toml): finished with status 'done'
2023-11-10T22:27:38,182   Source in /tmp/pip-wheel-mkhovt8k/moleculekit_c9d496038127472eac6b64ee26d6d484 has version 1.8.7, which satisfies requirement moleculekit==1.8.7 from https://files.pythonhosted.org/packages/67/c5/ed682f5ea9a16915b98612e0b274b50303bb912ccb71ab106247e01be8c2/moleculekit-1.8.7.tar.gz
2023-11-10T22:27:38,183   Removed moleculekit==1.8.7 from https://files.pythonhosted.org/packages/67/c5/ed682f5ea9a16915b98612e0b274b50303bb912ccb71ab106247e01be8c2/moleculekit-1.8.7.tar.gz from build tracker '/tmp/pip-build-tracker-fzp_xtz2'
2023-11-10T22:27:38,189 Created temporary directory: /tmp/pip-unpack-oz5zpswe
2023-11-10T22:27:38,190 Created temporary directory: /tmp/pip-unpack-sr2p3p62
2023-11-10T22:27:38,198 Building wheels for collected packages: moleculekit
2023-11-10T22:27:38,202   Created temporary directory: /tmp/pip-wheel-0ucj5w0i
2023-11-10T22:27:38,203   Destination directory: /tmp/pip-wheel-0ucj5w0i
2023-11-10T22:27:38,205   Building wheel for moleculekit (pyproject.toml): started
2023-11-10T22:27:38,206   Running command Building wheel for moleculekit (pyproject.toml)
2023-11-10T22:27:40,426   running bdist_wheel
2023-11-10T22:27:40,443   running build
2023-11-10T22:27:40,444   running build_py
2023-11-10T22:27:40,452   creating build
2023-11-10T22:27:40,452   creating build/lib.linux-armv7l-cpython-39
2023-11-10T22:27:40,453   creating build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,454   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,456   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,458   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,461   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,462   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,464   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,468   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,471   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,475   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,478   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,479   copying moleculekit/distance.py -> build/lib.linux-armv7l-cpython-39/moleculekit
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2023-11-10T22:27:40,483   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,485   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,486   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,488   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,490   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,492   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,494   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-39/moleculekit
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2023-11-10T22:27:40,498   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:40,500   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools
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2023-11-10T22:27:40,503   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-11-10T22:27:40,506   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-11-10T22:27:40,508   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-11-10T22:27:40,510   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-11-10T22:27:40,512   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-11-10T22:27:40,515   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-11-10T22:27:40,518   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-11-10T22:27:40,519   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
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2023-11-10T22:27:40,528   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2023-11-10T22:27:40,531   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions
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2023-11-10T22:27:40,537   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
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2023-11-10T22:27:40,540   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
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2023-11-10T22:27:40,544   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2023-11-10T22:27:40,546   creating build/lib.linux-armv7l-cpython-39/moleculekit/ply
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2023-11-10T22:27:40,551   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-11-10T22:27:40,553   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2023-11-10T22:27:40,556   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-11-10T22:27:40,557   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2023-11-10T22:27:40,559   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-11-10T22:27:40,560   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-11-10T22:27:40,562   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-11-10T22:27:40,564   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-11-10T22:27:40,567   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-11-10T22:27:40,569   copying moleculekit/smallmol/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-11-10T22:27:40,570   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2023-11-10T22:27:40,573   creating build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,574   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,577   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,579   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,581   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,583   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,585   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,588   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,590   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,592   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,594   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,596   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,597   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,599   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,601   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,603   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2023-11-10T22:27:40,606   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-11-10T22:27:40,607   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-11-10T22:27:40,608   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2023-11-10T22:27:40,611   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-11-10T22:27:40,611   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-11-10T22:27:40,614   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-11-10T22:27:40,616   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-11-10T22:27:40,617   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2023-11-10T22:27:40,620   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-11-10T22:27:40,620   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-11-10T22:27:40,623   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-11-10T22:27:40,625   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-11-10T22:27:40,627   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2023-11-10T22:27:40,630   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-11-10T22:27:40,630   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-11-10T22:27:40,633   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2023-11-10T22:27:40,634   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-11-10T22:27:40,635   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-11-10T22:27:40,638   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-11-10T22:27:40,639   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-11-10T22:27:40,641   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2023-11-10T22:27:40,643   running egg_info
2023-11-10T22:27:40,649   writing moleculekit.egg-info/PKG-INFO
2023-11-10T22:27:40,652   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2023-11-10T22:27:40,653   writing requirements to moleculekit.egg-info/requires.txt
2023-11-10T22:27:40,654   writing top-level names to moleculekit.egg-info/top_level.txt
2023-11-10T22:27:40,667   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,668   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,668   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,668   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,668   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,668   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,668   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,668   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,669   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,669   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,669   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,669   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,669   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,669   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,669   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,669   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,670   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,670   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,670   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,670   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,670   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,670   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,670   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,670   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,671   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,671   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,671   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,671   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,671   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,671   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,671   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,671   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,672   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,672   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,672   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,672   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,672   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,672   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,672   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,672   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,673   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,673   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,673   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,673   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,673   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,673   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,673   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,673   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,674   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,674   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,674   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,674   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,674   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,674   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,674   dependency /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-11-10T22:27:40,680   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-11-10T22:27:40,689   reading manifest template 'MANIFEST.in'
2023-11-10T22:27:40,892   no previously-included directories found matching 'moleculekit/test-data'
2023-11-10T22:27:40,893   no previously-included directories found matching 'moleculekit/tests'
2023-11-10T22:27:40,894   no previously-included directories found matching 'package'
2023-11-10T22:27:40,894   adding license file 'LICENSE'
2023-11-10T22:27:40,911   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2023-11-10T22:27:40,922   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2023-11-10T22:27:40,922   !!

2023-11-10T22:27:40,922           ********************************************************************************
2023-11-10T22:27:40,922           ############################
2023-11-10T22:27:40,922           # Package would be ignored #
2023-11-10T22:27:40,923           ############################
2023-11-10T22:27:40,923           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2023-11-10T22:27:40,923           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,923           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,923           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2023-11-10T22:27:40,923           to the `packages` configuration field.

2023-11-10T22:27:40,923           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,924           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,924           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,924           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,924           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,924           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2023-11-10T22:27:40,925           already explicitly excluding 'moleculekit.atomselect_utils' via
2023-11-10T22:27:40,925           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,925           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,925           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,925           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,925           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,926           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,926                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,926                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,926                 directory, all directories are treated like packages.
2023-11-10T22:27:40,926           ********************************************************************************

2023-11-10T22:27:40,926   !!
2023-11-10T22:27:40,927     check.warn(importable)
2023-11-10T22:27:40,927   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2023-11-10T22:27:40,927   !!

2023-11-10T22:27:40,927           ********************************************************************************
2023-11-10T22:27:40,927           ############################
2023-11-10T22:27:40,927           # Package would be ignored #
2023-11-10T22:27:40,927           ############################
2023-11-10T22:27:40,928           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2023-11-10T22:27:40,928           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,928           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,928           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2023-11-10T22:27:40,928           to the `packages` configuration field.

2023-11-10T22:27:40,928           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,928           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,929           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,929           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,929           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,929           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2023-11-10T22:27:40,929           already explicitly excluding 'moleculekit.bondguesser_utils' via
2023-11-10T22:27:40,929           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,929           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,930           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,930           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,930           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,930           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,930                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,931                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,931                 directory, all directories are treated like packages.
2023-11-10T22:27:40,931           ********************************************************************************

2023-11-10T22:27:40,931   !!
2023-11-10T22:27:40,931     check.warn(importable)
2023-11-10T22:27:40,931   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2023-11-10T22:27:40,931   !!

2023-11-10T22:27:40,932           ********************************************************************************
2023-11-10T22:27:40,932           ############################
2023-11-10T22:27:40,932           # Package would be ignored #
2023-11-10T22:27:40,932           ############################
2023-11-10T22:27:40,932           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2023-11-10T22:27:40,932           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,932           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,932           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2023-11-10T22:27:40,933           to the `packages` configuration field.

2023-11-10T22:27:40,933           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,933           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,933           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,933           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,933           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,934           If you don't want 'moleculekit.distance_utils' to be distributed and are
2023-11-10T22:27:40,934           already explicitly excluding 'moleculekit.distance_utils' via
2023-11-10T22:27:40,934           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,934           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,934           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,934           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,934           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,935           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,935                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,935                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,935                 directory, all directories are treated like packages.
2023-11-10T22:27:40,935           ********************************************************************************

2023-11-10T22:27:40,935   !!
2023-11-10T22:27:40,936     check.warn(importable)
2023-11-10T22:27:40,936   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2023-11-10T22:27:40,936   !!

2023-11-10T22:27:40,936           ********************************************************************************
2023-11-10T22:27:40,936           ############################
2023-11-10T22:27:40,936           # Package would be ignored #
2023-11-10T22:27:40,936           ############################
2023-11-10T22:27:40,936           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2023-11-10T22:27:40,937           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,937           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,937           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2023-11-10T22:27:40,937           to the `packages` configuration field.

2023-11-10T22:27:40,937           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,937           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,937           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,938           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,938           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,938           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2023-11-10T22:27:40,938           already explicitly excluding 'moleculekit.interactions.cationpi' via
2023-11-10T22:27:40,938           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,938           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,938           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,939           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,939           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,939           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,939                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,939                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,940                 directory, all directories are treated like packages.
2023-11-10T22:27:40,940           ********************************************************************************

2023-11-10T22:27:40,940   !!
2023-11-10T22:27:40,940     check.warn(importable)
2023-11-10T22:27:40,940   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2023-11-10T22:27:40,940   !!

2023-11-10T22:27:40,940           ********************************************************************************
2023-11-10T22:27:40,941           ############################
2023-11-10T22:27:40,941           # Package would be ignored #
2023-11-10T22:27:40,941           ############################
2023-11-10T22:27:40,941           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2023-11-10T22:27:40,941           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,941           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,941           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2023-11-10T22:27:40,941           to the `packages` configuration field.

2023-11-10T22:27:40,942           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,942           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,942           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,942           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,942           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,942           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2023-11-10T22:27:40,943           already explicitly excluding 'moleculekit.interactions.hbonds' via
2023-11-10T22:27:40,943           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,943           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,943           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,943           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,943           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,944           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,944                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,944                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,944                 directory, all directories are treated like packages.
2023-11-10T22:27:40,944           ********************************************************************************

2023-11-10T22:27:40,944   !!
2023-11-10T22:27:40,944     check.warn(importable)
2023-11-10T22:27:40,945   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2023-11-10T22:27:40,945   !!

2023-11-10T22:27:40,945           ********************************************************************************
2023-11-10T22:27:40,945           ############################
2023-11-10T22:27:40,945           # Package would be ignored #
2023-11-10T22:27:40,945           ############################
2023-11-10T22:27:40,945           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2023-11-10T22:27:40,946           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,946           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,946           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2023-11-10T22:27:40,946           to the `packages` configuration field.

2023-11-10T22:27:40,946           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,946           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,946           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,947           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,947           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,947           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2023-11-10T22:27:40,947           already explicitly excluding 'moleculekit.interactions.pipi' via
2023-11-10T22:27:40,947           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,947           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,948           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,948           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,948           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,948           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,948                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,948                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,949                 directory, all directories are treated like packages.
2023-11-10T22:27:40,949           ********************************************************************************

2023-11-10T22:27:40,949   !!
2023-11-10T22:27:40,949     check.warn(importable)
2023-11-10T22:27:40,949   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2023-11-10T22:27:40,949   !!

2023-11-10T22:27:40,949           ********************************************************************************
2023-11-10T22:27:40,950           ############################
2023-11-10T22:27:40,950           # Package would be ignored #
2023-11-10T22:27:40,950           ############################
2023-11-10T22:27:40,950           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2023-11-10T22:27:40,950           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,950           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,950           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2023-11-10T22:27:40,950           to the `packages` configuration field.

2023-11-10T22:27:40,951           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,951           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,951           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,951           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,951           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,951           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2023-11-10T22:27:40,952           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2023-11-10T22:27:40,952           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,952           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,952           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,952           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,952           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,953           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,953                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,953                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,953                 directory, all directories are treated like packages.
2023-11-10T22:27:40,953           ********************************************************************************

2023-11-10T22:27:40,953   !!
2023-11-10T22:27:40,953     check.warn(importable)
2023-11-10T22:27:40,953   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2023-11-10T22:27:40,954   !!

2023-11-10T22:27:40,954           ********************************************************************************
2023-11-10T22:27:40,954           ############################
2023-11-10T22:27:40,954           # Package would be ignored #
2023-11-10T22:27:40,954           ############################
2023-11-10T22:27:40,954           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2023-11-10T22:27:40,954           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,954           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,955           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2023-11-10T22:27:40,955           to the `packages` configuration field.

2023-11-10T22:27:40,955           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,955           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,955           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,955           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,956           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,956           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2023-11-10T22:27:40,956           already explicitly excluding 'moleculekit.occupancy_utils' via
2023-11-10T22:27:40,956           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,956           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,956           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,956           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,957           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,957           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,957                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,957                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,957                 directory, all directories are treated like packages.
2023-11-10T22:27:40,957           ********************************************************************************

2023-11-10T22:27:40,958   !!
2023-11-10T22:27:40,958     check.warn(importable)
2023-11-10T22:27:40,958   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2023-11-10T22:27:40,958   !!

2023-11-10T22:27:40,958           ********************************************************************************
2023-11-10T22:27:40,958           ############################
2023-11-10T22:27:40,958           # Package would be ignored #
2023-11-10T22:27:40,958           ############################
2023-11-10T22:27:40,958           Python recognizes 'moleculekit.share' as an importable package[^1],
2023-11-10T22:27:40,959           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,959           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,959           package, please make sure that 'moleculekit.share' is explicitly added
2023-11-10T22:27:40,959           to the `packages` configuration field.

2023-11-10T22:27:40,959           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,959           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,959           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,960           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,960           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,960           If you don't want 'moleculekit.share' to be distributed and are
2023-11-10T22:27:40,960           already explicitly excluding 'moleculekit.share' via
2023-11-10T22:27:40,960           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,960           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,961           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,961           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,961           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,961           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,961                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,961                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,962                 directory, all directories are treated like packages.
2023-11-10T22:27:40,962           ********************************************************************************

2023-11-10T22:27:40,962   !!
2023-11-10T22:27:40,962     check.warn(importable)
2023-11-10T22:27:40,962   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2023-11-10T22:27:40,962   !!

2023-11-10T22:27:40,963           ********************************************************************************
2023-11-10T22:27:40,963           ############################
2023-11-10T22:27:40,963           # Package would be ignored #
2023-11-10T22:27:40,963           ############################
2023-11-10T22:27:40,963           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2023-11-10T22:27:40,963           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,963           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,964           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2023-11-10T22:27:40,964           to the `packages` configuration field.

2023-11-10T22:27:40,964           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,964           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,964           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,964           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,965           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,965           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2023-11-10T22:27:40,965           already explicitly excluding 'moleculekit.share.atomselect' via
2023-11-10T22:27:40,965           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,965           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,965           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,966           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,966           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,966           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,966                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,967                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,967                 directory, all directories are treated like packages.
2023-11-10T22:27:40,967           ********************************************************************************

2023-11-10T22:27:40,967   !!
2023-11-10T22:27:40,967     check.warn(importable)
2023-11-10T22:27:40,967   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2023-11-10T22:27:40,967   !!

2023-11-10T22:27:40,968           ********************************************************************************
2023-11-10T22:27:40,968           ############################
2023-11-10T22:27:40,968           # Package would be ignored #
2023-11-10T22:27:40,968           ############################
2023-11-10T22:27:40,968           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2023-11-10T22:27:40,968           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,968           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,969           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2023-11-10T22:27:40,969           to the `packages` configuration field.

2023-11-10T22:27:40,969           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,969           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,969           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,969           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,970           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,970           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2023-11-10T22:27:40,970           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2023-11-10T22:27:40,970           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,970           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,970           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,971           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,971           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,971           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,971                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,971                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,971                 directory, all directories are treated like packages.
2023-11-10T22:27:40,972           ********************************************************************************

2023-11-10T22:27:40,972   !!
2023-11-10T22:27:40,972     check.warn(importable)
2023-11-10T22:27:40,972   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2023-11-10T22:27:40,972   !!

2023-11-10T22:27:40,972           ********************************************************************************
2023-11-10T22:27:40,972           ############################
2023-11-10T22:27:40,973           # Package would be ignored #
2023-11-10T22:27:40,973           ############################
2023-11-10T22:27:40,973           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2023-11-10T22:27:40,973           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,973           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,973           package, please make sure that 'moleculekit.tmalign' is explicitly added
2023-11-10T22:27:40,973           to the `packages` configuration field.

2023-11-10T22:27:40,974           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,974           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,974           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,974           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,974           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,975           If you don't want 'moleculekit.tmalign' to be distributed and are
2023-11-10T22:27:40,975           already explicitly excluding 'moleculekit.tmalign' via
2023-11-10T22:27:40,975           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,975           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,975           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,976           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,976           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,976           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,976                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,977                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,977                 directory, all directories are treated like packages.
2023-11-10T22:27:40,977           ********************************************************************************

2023-11-10T22:27:40,977   !!
2023-11-10T22:27:40,977     check.warn(importable)
2023-11-10T22:27:40,977   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2023-11-10T22:27:40,977   !!

2023-11-10T22:27:40,978           ********************************************************************************
2023-11-10T22:27:40,978           ############################
2023-11-10T22:27:40,978           # Package would be ignored #
2023-11-10T22:27:40,978           ############################
2023-11-10T22:27:40,978           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2023-11-10T22:27:40,978           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,979           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,979           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2023-11-10T22:27:40,979           to the `packages` configuration field.

2023-11-10T22:27:40,979           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,979           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,980           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,980           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,980           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,980           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2023-11-10T22:27:40,981           already explicitly excluding 'moleculekit.tmalign.include' via
2023-11-10T22:27:40,981           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,981           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,981           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,982           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,982           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,982           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,983                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,983                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,983                 directory, all directories are treated like packages.
2023-11-10T22:27:40,983           ********************************************************************************

2023-11-10T22:27:40,983   !!
2023-11-10T22:27:40,983     check.warn(importable)
2023-11-10T22:27:40,984   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2023-11-10T22:27:40,984   !!

2023-11-10T22:27:40,984           ********************************************************************************
2023-11-10T22:27:40,984           ############################
2023-11-10T22:27:40,984           # Package would be ignored #
2023-11-10T22:27:40,984           ############################
2023-11-10T22:27:40,985           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2023-11-10T22:27:40,985           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,985           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,985           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2023-11-10T22:27:40,985           to the `packages` configuration field.

2023-11-10T22:27:40,986           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,986           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,986           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,986           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,986           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,987           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2023-11-10T22:27:40,987           already explicitly excluding 'moleculekit.tmalign.src' via
2023-11-10T22:27:40,987           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,987           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,987           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,987           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,988           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,988           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,988                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,988                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,988                 directory, all directories are treated like packages.
2023-11-10T22:27:40,988           ********************************************************************************

2023-11-10T22:27:40,989   !!
2023-11-10T22:27:40,989     check.warn(importable)
2023-11-10T22:27:40,989   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2023-11-10T22:27:40,989   !!

2023-11-10T22:27:40,989           ********************************************************************************
2023-11-10T22:27:40,989           ############################
2023-11-10T22:27:40,989           # Package would be ignored #
2023-11-10T22:27:40,989           ############################
2023-11-10T22:27:40,990           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2023-11-10T22:27:40,990           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,990           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,990           package, please make sure that 'moleculekit.wrapping' is explicitly added
2023-11-10T22:27:40,990           to the `packages` configuration field.

2023-11-10T22:27:40,990           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,990           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,991           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,991           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,991           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,991           If you don't want 'moleculekit.wrapping' to be distributed and are
2023-11-10T22:27:40,991           already explicitly excluding 'moleculekit.wrapping' via
2023-11-10T22:27:40,991           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,991           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,992           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,992           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,992           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,992           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,993                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,993                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,993                 directory, all directories are treated like packages.
2023-11-10T22:27:40,993           ********************************************************************************

2023-11-10T22:27:40,993   !!
2023-11-10T22:27:40,993     check.warn(importable)
2023-11-10T22:27:40,993   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils' is absent from the `packages` configuration.
2023-11-10T22:27:40,994   !!

2023-11-10T22:27:40,994           ********************************************************************************
2023-11-10T22:27:40,994           ############################
2023-11-10T22:27:40,994           # Package would be ignored #
2023-11-10T22:27:40,994           ############################
2023-11-10T22:27:40,994           Python recognizes 'moleculekit.xtc_utils' as an importable package[^1],
2023-11-10T22:27:40,994           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:40,995           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:40,995           package, please make sure that 'moleculekit.xtc_utils' is explicitly added
2023-11-10T22:27:40,995           to the `packages` configuration field.

2023-11-10T22:27:40,995           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:40,995           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:40,996           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:40,996           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:40,996           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:40,996           If you don't want 'moleculekit.xtc_utils' to be distributed and are
2023-11-10T22:27:40,996           already explicitly excluding 'moleculekit.xtc_utils' via
2023-11-10T22:27:40,997           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:40,997           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:40,997           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:40,997           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:40,997           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:40,998           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:40,998                 even if it does not contain any `.py` files.
2023-11-10T22:27:40,998                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:40,998                 directory, all directories are treated like packages.
2023-11-10T22:27:40,998           ********************************************************************************

2023-11-10T22:27:40,998   !!
2023-11-10T22:27:40,998     check.warn(importable)
2023-11-10T22:27:40,999   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.include' is absent from the `packages` configuration.
2023-11-10T22:27:40,999   !!

2023-11-10T22:27:40,999           ********************************************************************************
2023-11-10T22:27:40,999           ############################
2023-11-10T22:27:40,999           # Package would be ignored #
2023-11-10T22:27:40,999           ############################
2023-11-10T22:27:40,999           Python recognizes 'moleculekit.xtc_utils.include' as an importable package[^1],
2023-11-10T22:27:40,999           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:41,000           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:41,000           package, please make sure that 'moleculekit.xtc_utils.include' is explicitly added
2023-11-10T22:27:41,000           to the `packages` configuration field.

2023-11-10T22:27:41,000           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:41,000           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:41,000           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:41,001           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:41,001           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:41,001           If you don't want 'moleculekit.xtc_utils.include' to be distributed and are
2023-11-10T22:27:41,001           already explicitly excluding 'moleculekit.xtc_utils.include' via
2023-11-10T22:27:41,001           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:41,001           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:41,002           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:41,002           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:41,002           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:41,002           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:41,003                 even if it does not contain any `.py` files.
2023-11-10T22:27:41,003                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:41,003                 directory, all directories are treated like packages.
2023-11-10T22:27:41,003           ********************************************************************************

2023-11-10T22:27:41,004   !!
2023-11-10T22:27:41,004     check.warn(importable)
2023-11-10T22:27:41,004   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:204: _Warning: Package 'moleculekit.xtc_utils.src' is absent from the `packages` configuration.
2023-11-10T22:27:41,004   !!

2023-11-10T22:27:41,005           ********************************************************************************
2023-11-10T22:27:41,005           ############################
2023-11-10T22:27:41,006           # Package would be ignored #
2023-11-10T22:27:41,006           ############################
2023-11-10T22:27:41,006           Python recognizes 'moleculekit.xtc_utils.src' as an importable package[^1],
2023-11-10T22:27:41,006           but it is absent from setuptools' `packages` configuration.

2023-11-10T22:27:41,006           This leads to an ambiguous overall configuration. If you want to distribute this
2023-11-10T22:27:41,007           package, please make sure that 'moleculekit.xtc_utils.src' is explicitly added
2023-11-10T22:27:41,007           to the `packages` configuration field.

2023-11-10T22:27:41,007           Alternatively, you can also rely on setuptools' discovery methods
2023-11-10T22:27:41,007           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-11-10T22:27:41,007           instead of `find_packages(...)`/`find:`).

2023-11-10T22:27:41,008           You can read more about "package discovery" on setuptools documentation page:

2023-11-10T22:27:41,008           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-11-10T22:27:41,008           If you don't want 'moleculekit.xtc_utils.src' to be distributed and are
2023-11-10T22:27:41,008           already explicitly excluding 'moleculekit.xtc_utils.src' via
2023-11-10T22:27:41,009           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-11-10T22:27:41,009           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-11-10T22:27:41,009           combination with a more fine grained `package-data` configuration.

2023-11-10T22:27:41,009           You can read more about "package data files" on setuptools documentation page:

2023-11-10T22:27:41,009           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-11-10T22:27:41,010           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-11-10T22:27:41,010                 even if it does not contain any `.py` files.
2023-11-10T22:27:41,011                 On the other hand, currently there is no concept of package data
2023-11-10T22:27:41,011                 directory, all directories are treated like packages.
2023-11-10T22:27:41,011           ********************************************************************************

2023-11-10T22:27:41,011   !!
2023-11-10T22:27:41,011     check.warn(importable)
2023-11-10T22:27:41,011   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:41,012   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:41,012   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-11-10T22:27:41,012   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-11-10T22:27:41,012   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-11-10T22:27:41,012   creating build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-11-10T22:27:41,012   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-11-10T22:27:41,021   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-11-10T22:27:41,023   creating build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-11-10T22:27:41,024   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-11-10T22:27:41,051   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-11-10T22:27:41,053   creating build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-11-10T22:27:41,054   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-11-10T22:27:41,079   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-11-10T22:27:41,081   creating build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-11-10T22:27:41,082   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-11-10T22:27:41,085   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-11-10T22:27:41,087   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2023-11-10T22:27:41,274   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-11-10T22:27:41,275   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2023-11-10T22:27:41,277   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr
2023-11-10T22:27:41,278   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,279   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,280   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,282   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,284   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,286   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,288   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,290   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,291   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,293   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,295   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,297   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,299   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,301   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,303   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,305   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,307   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,308   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,311   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,313   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,315   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,317   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,319   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,321   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,323   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,324   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,327   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,329   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,331   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,333   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,335   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,337   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,339   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,340   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,342   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,344   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,346   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,348   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,350   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,351   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,353   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,355   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,357   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,359   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,361   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,363   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,365   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,367   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,368   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,370   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,373   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,374   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,376   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,378   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,380   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,382   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,384   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,386   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,388   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,390   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,392   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,394   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,396   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,398   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,399   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,401   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,404   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,406   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,407   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,409   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,411   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,413   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,415   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,416   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,418   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,420   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,422   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,424   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,426   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,427   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,429   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,431   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,433   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,435   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,437   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,439   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,441   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,443   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,445   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,447   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,448   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,450   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,452   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,454   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,456   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,458   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,460   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,462   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,463   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,465   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,467   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,469   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,471   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,473   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,475   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,477   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,479   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,480   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,482   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,484   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,486   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,488   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,490   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,492   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,494   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,495   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,498   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,500   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,501   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,503   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,505   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,507   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,509   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,511   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,513   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,514   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,517   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,518   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,521   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,522   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,525   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,527   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,529   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,532   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,534   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,536   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,539   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,541   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,543   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,545   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,548   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,550   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,552   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,555   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,557   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,559   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,562   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,564   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,566   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,569   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,571   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,573   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,576   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,578   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,580   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,583   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,586   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,588   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,590   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,593   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,595   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,598   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,600   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,602   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,605   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,607   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,609   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,611   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,614   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,616   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,619   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,621   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,623   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,625   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,627   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,629   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2023-11-10T22:27:41,631   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-11-10T22:27:41,631   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-11-10T22:27:41,655   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-11-10T22:27:41,657   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2023-11-10T22:27:41,659   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-11-10T22:27:41,660   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2023-11-10T22:27:41,662   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-11-10T22:27:41,663   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-11-10T22:27:41,668   creating build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-11-10T22:27:41,669   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-11-10T22:27:41,688   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2023-11-10T22:27:41,690   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-11-10T22:27:41,691   copying moleculekit/xtc_utils/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-11-10T22:27:41,717   copying moleculekit/xtc_utils/xtc.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-11-10T22:27:41,719   copying moleculekit/xtc_utils/xtclib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-11-10T22:27:41,720   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-11-10T22:27:41,721   copying moleculekit/xtc_utils/include/xdrfile.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-11-10T22:27:41,724   copying moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-11-10T22:27:41,726   copying moleculekit/xtc_utils/include/xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include
2023-11-10T22:27:41,728   creating build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-11-10T22:27:41,729   copying moleculekit/xtc_utils/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-11-10T22:27:41,732   copying moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-11-10T22:27:41,734   copying moleculekit/xtc_utils/src/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-11-10T22:27:41,737   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-11-10T22:27:41,738   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-11-10T22:27:41,757   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-11-10T22:27:41,760   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-11-10T22:27:41,760   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-11-10T22:27:41,788   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-11-10T22:27:41,791   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-11-10T22:27:41,791   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-11-10T22:27:41,811   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-11-10T22:27:41,813   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-11-10T22:27:41,814   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-11-10T22:27:41,834   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-11-10T22:27:41,846   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-11-10T22:27:41,846   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.8.7'
2023-11-10T22:27:41,846   running build_ext
2023-11-10T22:27:41,858   building 'moleculekit.interactions.hbonds' extension
2023-11-10T22:27:41,859   creating build/temp.linux-armv7l-cpython-39
2023-11-10T22:27:41,859   creating build/temp.linux-armv7l-cpython-39/moleculekit
2023-11-10T22:27:41,860   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions
2023-11-10T22:27:41,860   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2023-11-10T22:27:41,861   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -O3
2023-11-10T22:27:42,117   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:27:42,117                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:27:42,117                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:27:42,118                    from moleculekit/interactions/hbonds/hbonds.cpp:1230:
2023-11-10T22:27:42,118   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:27:42,118      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:27:42,118         |  ^~~~~~~
2023-11-10T22:28:08,284   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:28:08,597   building 'moleculekit.interactions.pipi' extension
2023-11-10T22:28:08,597   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2023-11-10T22:28:08,598   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -O3
2023-11-10T22:28:08,827   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:28:08,827                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:28:08,828                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:28:08,828                    from moleculekit/interactions/pipi/pipi.cpp:1230:
2023-11-10T22:28:08,828   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:28:08,828      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:28:08,828         |  ^~~~~~~
2023-11-10T22:28:36,959   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:28:37,275   building 'moleculekit.interactions.cationpi' extension
2023-11-10T22:28:37,276   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2023-11-10T22:28:37,277   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -O3
2023-11-10T22:28:37,506   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:28:37,507                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:28:37,507                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:28:37,507                    from moleculekit/interactions/cationpi/cationpi.cpp:1230:
2023-11-10T22:28:37,507   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:28:37,507      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:28:37,507         |  ^~~~~~~
2023-11-10T22:29:05,464   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:29:05,782   building 'moleculekit.interactions.sigmahole' extension
2023-11-10T22:29:05,783   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2023-11-10T22:29:05,783   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -O3
2023-11-10T22:29:06,017   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:29:06,018                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:29:06,018                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:29:06,018                    from moleculekit/interactions/sigmahole/sigmahole.cpp:1230:
2023-11-10T22:29:06,018   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:29:06,018      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:29:06,018         |  ^~~~~~~
2023-11-10T22:29:33,446   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:29:33,768   building 'moleculekit.wrapping' extension
2023-11-10T22:29:33,768   creating build/temp.linux-armv7l-cpython-39/moleculekit/wrapping
2023-11-10T22:29:33,769   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -O3
2023-11-10T22:29:34,003   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:29:34,003                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:29:34,003                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:29:34,003                    from moleculekit/wrapping/wrapping.cpp:1230:
2023-11-10T22:29:34,003   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:29:34,003      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:29:34,004         |  ^~~~~~~
2023-11-10T22:29:59,986   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:30:00,200   building 'moleculekit.bondguesser_utils' extension
2023-11-10T22:30:00,201   creating build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2023-11-10T22:30:00,202   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2023-11-10T22:30:00,433   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:30:00,433                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:30:00,433                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:30:00,433                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:1230:
2023-11-10T22:30:00,434   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:30:00,434      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:30:00,434         |  ^~~~~~~
2023-11-10T22:30:01,979   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2023-11-10T22:30:01,979   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19782:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-11-10T22:30:01,979   19782 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2023-11-10T22:30:01,980         |                       ~~~~~~~~~~^~~~~~~~~~~
2023-11-10T22:30:01,980   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19794:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-11-10T22:30:01,980   19794 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2023-11-10T22:30:01,980         |                         ~~~~~~~~~~^~~~~~~~~~~
2023-11-10T22:30:01,980   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19806:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2023-11-10T22:30:01,980   19806 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2023-11-10T22:30:01,980         |                           ~~~~~~~~~~^~~~~~~~~~~
2023-11-10T22:30:01,981   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19845:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,981   19845 |         __pyx_t_12 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-11-10T22:30:01,981         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,981   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19884:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,981   19884 |         __pyx_t_12 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-11-10T22:30:01,981         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,982   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19923:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,982   19923 |         __pyx_t_12 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-11-10T22:30:01,982         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,982   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19962:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,982   19962 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-11-10T22:30:01,982         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,982   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19968:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,982   19968 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-11-10T22:30:01,983         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,983   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20009:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,983   20009 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-11-10T22:30:01,983         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,983   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20015:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,983   20015 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-11-10T22:30:01,983         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,984   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20056:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,984   20056 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-11-10T22:30:01,984         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,984   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20062:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,984   20062 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-11-10T22:30:01,984         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,984   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20103:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,985   20103 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-11-10T22:30:01,985         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,985   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20156:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,985   20156 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-11-10T22:30:01,985         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,986   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20203:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,986   20203 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-11-10T22:30:01,986         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,986   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20244:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,986   20244 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-11-10T22:30:01,986         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,987   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20250:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,987   20250 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-11-10T22:30:01,987         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,987   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20256:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,987   20256 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-11-10T22:30:01,987         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,987   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20303:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,988   20303 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2023-11-10T22:30:01,988         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,988   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20309:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,988   20309 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-11-10T22:30:01,988         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,988   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20350:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,988   20350 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2023-11-10T22:30:01,988         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,989   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20362:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,989   20362 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-11-10T22:30:01,989         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:01,989   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20415:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2023-11-10T22:30:01,989   20415 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2023-11-10T22:30:01,989         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:30:02,008   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2023-11-10T22:30:02,008   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21037:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-11-10T22:30:02,009   21037 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_n_boxes);
2023-11-10T22:30:02,009         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2023-11-10T22:30:02,009   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21074:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-11-10T22:30:02,009   21074 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_boxidx);
2023-11-10T22:30:02,009         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-11-10T22:30:25,124   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:30:25,421   building 'moleculekit.atomselect_utils' extension
2023-11-10T22:30:25,422   creating build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2023-11-10T22:30:25,423   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -O3
2023-11-10T22:30:25,659   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:30:25,659                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:30:25,659                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:30:25,659                    from moleculekit/atomselect_utils/atomselect_utils.cpp:1247:
2023-11-10T22:30:25,659   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:30:25,660      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:30:25,660         |  ^~~~~~~
2023-11-10T22:30:27,375   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2023-11-10T22:30:27,375   moleculekit/atomselect_utils/atomselect_utils.cpp:23209:161: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-11-10T22:30:27,375   23209 |       __pyx_t_3 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum);
2023-11-10T22:30:27,375         |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2023-11-10T22:30:27,380   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-11-10T22:30:27,380   moleculekit/atomselect_utils/atomselect_utils.cpp:23461:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-11-10T22:30:27,381   23461 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-11-10T22:30:27,381         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-11-10T22:30:27,386   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2023-11-10T22:30:27,386   moleculekit/atomselect_utils/atomselect_utils.cpp:23728:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2023-11-10T22:30:27,386   23728 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2023-11-10T22:30:27,386         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-11-10T22:30:57,356   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:30:57,676   building 'moleculekit.distance_utils' extension
2023-11-10T22:30:57,677   creating build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils
2023-11-10T22:30:57,678   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -O3
2023-11-10T22:30:57,911   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:30:57,911                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:30:57,911                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:30:57,911                    from moleculekit/distance_utils/distance_utils.cpp:1230:
2023-11-10T22:30:57,912   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:30:57,912      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:30:57,912         |  ^~~~~~~
2023-11-10T22:31:33,014   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:31:33,343   building 'moleculekit.occupancy_utils' extension
2023-11-10T22:31:33,344   creating build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2023-11-10T22:31:33,345   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -O3
2023-11-10T22:31:33,583   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:31:33,583                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:31:33,583                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:31:33,584                    from moleculekit/occupancy_utils/occupancy_utils.cpp:1230:
2023-11-10T22:31:33,584   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:31:33,584      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:31:33,584         |  ^~~~~~~
2023-11-10T22:31:56,734   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:31:56,944   building 'moleculekit.xtc' extension
2023-11-10T22:31:56,945   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils
2023-11-10T22:31:56,946   creating build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src
2023-11-10T22:31:56,947   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o
2023-11-10T22:31:57,183   moleculekit/xtc_utils/src/xdrfile.cpp:66:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,183      66 |  "OK",
2023-11-10T22:31:57,183         |  ^~~~
2023-11-10T22:31:57,183   moleculekit/xtc_utils/src/xdrfile.cpp:67:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,183      67 |  "Header",
2023-11-10T22:31:57,183         |  ^~~~~~~~
2023-11-10T22:31:57,184   moleculekit/xtc_utils/src/xdrfile.cpp:68:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,184      68 |  "String",
2023-11-10T22:31:57,184         |  ^~~~~~~~
2023-11-10T22:31:57,184   moleculekit/xtc_utils/src/xdrfile.cpp:69:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,184      69 |  "Double",
2023-11-10T22:31:57,184         |  ^~~~~~~~
2023-11-10T22:31:57,184   moleculekit/xtc_utils/src/xdrfile.cpp:70:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,185      70 |  "Integer",
2023-11-10T22:31:57,185         |  ^~~~~~~~~
2023-11-10T22:31:57,185   moleculekit/xtc_utils/src/xdrfile.cpp:71:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,185      71 |  "Float",
2023-11-10T22:31:57,185         |  ^~~~~~~
2023-11-10T22:31:57,185   moleculekit/xtc_utils/src/xdrfile.cpp:72:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,185      72 |  "Unsigned integer",
2023-11-10T22:31:57,186         |  ^~~~~~~~~~~~~~~~~~
2023-11-10T22:31:57,186   moleculekit/xtc_utils/src/xdrfile.cpp:73:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,186      73 |  "Compressed 3D coordinate",
2023-11-10T22:31:57,186         |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:31:57,186   moleculekit/xtc_utils/src/xdrfile.cpp:74:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,186      74 |  "Closing file",
2023-11-10T22:31:57,186         |  ^~~~~~~~~~~~~~
2023-11-10T22:31:57,187   moleculekit/xtc_utils/src/xdrfile.cpp:75:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,187      75 |  "Magic number",
2023-11-10T22:31:57,187         |  ^~~~~~~~~~~~~~
2023-11-10T22:31:57,187   moleculekit/xtc_utils/src/xdrfile.cpp:76:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,187      76 |  "Not enough memory",
2023-11-10T22:31:57,187         |  ^~~~~~~~~~~~~~~~~~~
2023-11-10T22:31:57,187   moleculekit/xtc_utils/src/xdrfile.cpp:77:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,188      77 |  "End of file",
2023-11-10T22:31:57,188         |  ^~~~~~~~~~~~~
2023-11-10T22:31:57,188   moleculekit/xtc_utils/src/xdrfile.cpp:78:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-11-10T22:31:57,188      78 |  "File not found"
2023-11-10T22:31:57,188         |  ^~~~~~~~~~~~~~~~
2023-11-10T22:31:57,192   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2023-11-10T22:31:57,192   moleculekit/xtc_utils/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,192     459 |     while (size >= num && num_of_bits < 32)
2023-11-10T22:31:57,193         |            ~~~~~^~~~~~
2023-11-10T22:31:57,193   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2023-11-10T22:31:57,193   moleculekit/xtc_utils/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,193     505 |     while (bytes[num_of_bytes] >= num)
2023-11-10T22:31:57,193         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2023-11-10T22:31:57,195   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2023-11-10T22:31:57,196   moleculekit/xtc_utils/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,196     614 |     if (num_of_bits >= num_of_bytes * 8)
2023-11-10T22:31:57,196         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2023-11-10T22:31:57,196   moleculekit/xtc_utils/src/xdrfile.cpp:616:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,196     616 |   for (i = 0; i < num_of_bytes; i++)
2023-11-10T22:31:57,196         |               ~~^~~~~~~~~~~~~~
2023-11-10T22:31:57,197   moleculekit/xtc_utils/src/xdrfile.cpp:624:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,197     624 |   for (i = 0; i < num_of_bytes-1; i++)
2023-11-10T22:31:57,197         |               ~~^~~~~~~~~~~~~~~~
2023-11-10T22:31:57,197   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2023-11-10T22:31:57,197   moleculekit/xtc_utils/src/xdrfile.cpp:664:16: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,197     664 |   if (lastbits < num_of_bits)
2023-11-10T22:31:57,197         |       ~~~~~~~~~^~~~~~~~~~~~~
2023-11-10T22:31:57,200   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2023-11-10T22:31:57,201   moleculekit/xtc_utils/src/xdrfile.cpp:785:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,201     785 |  if(size3>xfp->buf1size)
2023-11-10T22:31:57,201         |     ~~~~~^~~~~~~~~~~~~~
2023-11-10T22:31:57,202   moleculekit/xtc_utils/src/xdrfile.cpp:842:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,203     842 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-11-10T22:31:57,203         |                   ^
2023-11-10T22:31:57,205   moleculekit/xtc_utils/src/xdrfile.cpp:932:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,205     932 |     if(countmjh >= size3 ) { return -1; }
2023-11-10T22:31:57,205         |        ~~~~~~~~~^~~~~~~~
2023-11-10T22:31:57,206   moleculekit/xtc_utils/src/xdrfile.cpp:935:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,206     935 |     if(countmjh >= size3 ) { return -1; }
2023-11-10T22:31:57,206         |        ~~~~~~~~~^~~~~~~~
2023-11-10T22:31:57,206   moleculekit/xtc_utils/src/xdrfile.cpp:938:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,206     938 |     if(countmjh >= size3 ) { return -1; }
2023-11-10T22:31:57,206         |        ~~~~~~~~~^~~~~~~~
2023-11-10T22:31:57,206   moleculekit/xtc_utils/src/xdrfile.cpp:945:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,207     945 |     if(countmjh >= size3 ) { return -1; }
2023-11-10T22:31:57,207         |        ~~~~~~~~~^~~~~~~~
2023-11-10T22:31:57,207   moleculekit/xtc_utils/src/xdrfile.cpp:948:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,207     948 |     if(countmjh >= size3 ) { return -1; }
2023-11-10T22:31:57,207         |        ~~~~~~~~~^~~~~~~~
2023-11-10T22:31:57,207   moleculekit/xtc_utils/src/xdrfile.cpp:951:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,207     951 |     if(countmjh >= size3 ) { return -1; }
2023-11-10T22:31:57,207         |        ~~~~~~~~~^~~~~~~~
2023-11-10T22:31:57,208   moleculekit/xtc_utils/src/xdrfile.cpp:756:17: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-11-10T22:31:57,208     756 |  int smallidx,  minidx, maxidx;
2023-11-10T22:31:57,208         |                 ^~~~~~
2023-11-10T22:31:57,208   moleculekit/xtc_utils/src/xdrfile.cpp:759:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-11-10T22:31:57,208     759 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-11-10T22:31:57,208         |                         ^~~~~~
2023-11-10T22:31:57,208   moleculekit/xtc_utils/src/xdrfile.cpp:763:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-11-10T22:31:57,208     763 |  int errval=1;
2023-11-10T22:31:57,209         |      ^~~~~~
2023-11-10T22:31:57,209   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2023-11-10T22:31:57,210   moleculekit/xtc_utils/src/xdrfile.cpp:1011:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,210    1011 |  if(size3>xfp->buf1size)
2023-11-10T22:31:57,210         |     ~~~~~^~~~~~~~~~~~~~
2023-11-10T22:31:57,211   moleculekit/xtc_utils/src/xdrfile.cpp:1068:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,212    1068 |     countmjh++; if( countmjh> size3) { return -1; }
2023-11-10T22:31:57,212         |                     ~~~~~~~~^~~~~~~
2023-11-10T22:31:57,212   moleculekit/xtc_utils/src/xdrfile.cpp:1084:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,212    1084 |    countmjh++; if( countmjh> size3) { return -1; }
2023-11-10T22:31:57,213         |                    ~~~~~~~~^~~~~~~
2023-11-10T22:31:57,213   moleculekit/xtc_utils/src/xdrfile.cpp:1098:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,213    1098 |    countmjh++; if( countmjh> size3) { return -1; }
2023-11-10T22:31:57,213         |                    ~~~~~~~~^~~~~~~
2023-11-10T22:31:57,214   moleculekit/xtc_utils/src/xdrfile.cpp:1137:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,215    1137 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2023-11-10T22:31:57,215         |                  ^
2023-11-10T22:31:57,215   moleculekit/xtc_utils/src/xdrfile.cpp:1143:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,215    1143 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-11-10T22:31:57,215         |                   ^
2023-11-10T22:31:57,219   moleculekit/xtc_utils/src/xdrfile.cpp:1275:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,219    1275 |  if(tmp==(unsigned int)buf2[0])
2023-11-10T22:31:57,219         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:31:57,219   moleculekit/xtc_utils/src/xdrfile.cpp:1001:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-11-10T22:31:57,219    1001 |  int errval;
2023-11-10T22:31:57,219         |      ^~~~~~
2023-11-10T22:31:57,222   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2023-11-10T22:31:57,222   moleculekit/xtc_utils/src/xdrfile.cpp:1316:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,222    1316 |  if(size3>xfp->buf1size)
2023-11-10T22:31:57,223         |     ~~~~~^~~~~~~~~~~~~~
2023-11-10T22:31:57,224   moleculekit/xtc_utils/src/xdrfile.cpp:1377:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,224    1377 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-11-10T22:31:57,224         |                   ^
2023-11-10T22:31:57,227   moleculekit/xtc_utils/src/xdrfile.cpp:1289:25: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2023-11-10T22:31:57,227    1289 |  int smallidx,  maxidx, minidx;
2023-11-10T22:31:57,227         |                         ^~~~~~
2023-11-10T22:31:57,227   moleculekit/xtc_utils/src/xdrfile.cpp:1292:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2023-11-10T22:31:57,227    1292 |  int smallnum, smaller, larger, i, is_smaller, run;
2023-11-10T22:31:57,228         |                         ^~~~~~
2023-11-10T22:31:57,228   moleculekit/xtc_utils/src/xdrfile.cpp:1297:6: warning: unused variable ‘errval’ [-Wunused-variable]
2023-11-10T22:31:57,228    1297 |  int errval=1;
2023-11-10T22:31:57,228         |      ^~~~~~
2023-11-10T22:31:57,229   moleculekit/xtc_utils/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2023-11-10T22:31:57,229   moleculekit/xtc_utils/src/xdrfile.cpp:1513:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,229    1513 |  if(size3>xfp->buf1size) {
2023-11-10T22:31:57,230         |     ~~~~~^~~~~~~~~~~~~~
2023-11-10T22:31:57,233   moleculekit/xtc_utils/src/xdrfile.cpp:1628:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,234    1628 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2023-11-10T22:31:57,234         |                  ^
2023-11-10T22:31:57,234   moleculekit/xtc_utils/src/xdrfile.cpp:1633:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2023-11-10T22:31:57,234    1633 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2023-11-10T22:31:57,234         |                   ^
2023-11-10T22:31:57,238   moleculekit/xtc_utils/src/xdrfile.cpp:1743:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2023-11-10T22:31:57,238    1743 |  if(tmp==(unsigned int)buf2[0])
2023-11-10T22:31:57,238         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2023-11-10T22:31:57,238   moleculekit/xtc_utils/src/xdrfile.cpp:1504:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2023-11-10T22:31:57,238    1504 |  int errval=1;
2023-11-10T22:31:57,238         |      ^~~~~~
2023-11-10T22:31:59,471   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o
2023-11-10T22:31:59,724   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/src/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o
2023-11-10T22:32:00,293   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2023-11-10T22:32:00,293   moleculekit/xtc_utils/src/xtc.cpp:207:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-11-10T22:32:00,293     207 |  int nf3 = nframes * 3; // Precalculate 3 * nframes for the coordinate lookup macro
2023-11-10T22:32:00,294         |      ^~~
2023-11-10T22:32:00,301   moleculekit/xtc_utils/src/xtc.cpp: In function ‘int xtc_write(char*, int, int, int*, float*, float*, float*)’:
2023-11-10T22:32:00,301   moleculekit/xtc_utils/src/xtc.cpp:418:6: warning: unused variable ‘nf3’ [-Wunused-variable]
2023-11-10T22:32:00,301     418 |  int nf3 = nframes * 3;
2023-11-10T22:32:00,301         |      ^~~
2023-11-10T22:32:00,306   moleculekit/xtc_utils/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2023-11-10T22:32:00,306   moleculekit/xtc_utils/src/xtc.cpp:491:6: warning: unused variable ‘reading_index’ [-Wunused-variable]
2023-11-10T22:32:00,307     491 |  int reading_index = 0;
2023-11-10T22:32:00,307         |      ^~~~~~~~~~~~~
2023-11-10T22:32:00,307   moleculekit/xtc_utils/src/xtc.cpp:492:6: warning: unused variable ‘writing_index’ [-Wunused-variable]
2023-11-10T22:32:00,307     492 |  int writing_index = 0;
2023-11-10T22:32:00,307         |      ^~~~~~~~~~~~~
2023-11-10T22:32:01,065   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/xtc_utils -Imoleculekit/xtc_utils/include/ -Imoleculekit/xtc_utils/ -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/xtc_utils/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o
2023-11-10T22:32:01,302   In file included from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2023-11-10T22:32:01,302                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2023-11-10T22:32:01,303                    from /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2023-11-10T22:32:01,303                    from moleculekit/xtc_utils/xtc.cpp:1234:
2023-11-10T22:32:01,303   /tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2023-11-10T22:32:01,303      17 | #warning "Using deprecated NumPy API, disable it with " \
2023-11-10T22:32:01,303         |  ^~~~~~~
2023-11-10T22:32:21,422   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:32:21,737   building 'moleculekit.tmalign' extension
2023-11-10T22:32:21,738   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign
2023-11-10T22:32:21,739   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src
2023-11-10T22:32:21,740   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o -w
2023-11-10T22:32:51,176   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-tv9xdlxz/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -w
2023-11-10T22:33:09,715   In file included from /usr/include/c++/10/vector:72,
2023-11-10T22:33:09,715                    from moleculekit/tmalign/tmalign_util.cpp:1245:
2023-11-10T22:33:09,715   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2023-11-10T22:33:09,716   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2023-11-10T22:33:09,716     426 |       vector<_Tp, _Alloc>::
2023-11-10T22:33:09,716         |       ^~~~~~~~~~~~~~~~~~~
2023-11-10T22:33:10,293   In file included from /usr/include/c++/10/vector:67,
2023-11-10T22:33:10,293                    from moleculekit/tmalign/tmalign_util.cpp:1245:
2023-11-10T22:33:10,293   /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’:
2023-11-10T22:33:10,293   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-11-10T22:33:10,293    1198 |    _M_realloc_insert(end(), __x);
2023-11-10T22:33:10,293         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-11-10T22:33:10,294   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-11-10T22:33:10,294    1198 |    _M_realloc_insert(end(), __x);
2023-11-10T22:33:10,294         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-11-10T22:33:10,294   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2023-11-10T22:33:10,295    1198 |    _M_realloc_insert(end(), __x);
2023-11-10T22:33:10,295         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2023-11-10T22:33:12,733   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so
2023-11-10T22:33:13,222   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2023-11-10T22:33:13,222   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.8.7'
2023-11-10T22:33:13,222   installing to build/bdist.linux-armv7l/wheel
2023-11-10T22:33:13,222   running install
2023-11-10T22:33:13,247   running install_lib
2023-11-10T22:33:13,253   creating build/bdist.linux-armv7l
2023-11-10T22:33:13,254   creating build/bdist.linux-armv7l/wheel
2023-11-10T22:33:13,256   creating build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,257   copying build/lib.linux-armv7l-cpython-39/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,259   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,260   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,262   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,264   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,267   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,269   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,271   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,273   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,276   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,278   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,280   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-11-10T22:33:13,281   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-11-10T22:33:13,283   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2023-11-10T22:33:13,285   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,287   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,289   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,292   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2023-11-10T22:33:13,296   copying build/lib.linux-armv7l-cpython-39/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,298   copying build/lib.linux-armv7l-cpython-39/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,301   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-11-10T22:33:13,302   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-11-10T22:33:13,337   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-11-10T22:33:13,338   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-11-10T22:33:13,365   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2023-11-10T22:33:13,368   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-11-10T22:33:13,369   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-11-10T22:33:13,389   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2023-11-10T22:33:13,392   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-11-10T22:33:13,393   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-11-10T22:33:13,395   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2023-11-10T22:33:13,420   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-11-10T22:33:13,421   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-11-10T22:33:13,445   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-11-10T22:33:13,468   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-11-10T22:33:13,471   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-11-10T22:33:13,472   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-11-10T22:33:13,492   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2023-11-10T22:33:13,494   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2023-11-10T22:33:13,519   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-11-10T22:33:13,520   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-11-10T22:33:13,522   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2023-11-10T22:33:13,541   copying build/lib.linux-armv7l-cpython-39/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,543   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-11-10T22:33:13,544   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-11-10T22:33:13,546   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-11-10T22:33:13,549   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-11-10T22:33:13,550   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2023-11-10T22:33:13,552   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-11-10T22:33:13,553   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-11-10T22:33:13,555   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-11-10T22:33:13,557   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-11-10T22:33:13,558   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-11-10T22:33:13,560   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-11-10T22:33:13,562   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/src
2023-11-10T22:33:13,565   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils
2023-11-10T22:33:13,586   creating build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-11-10T22:33:13,587   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-11-10T22:33:13,589   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-11-10T22:33:13,591   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc_utils/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/xtc_utils/include
2023-11-10T22:33:13,593   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,596   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-11-10T22:33:13,597   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-11-10T22:33:13,601   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-11-10T22:33:13,602   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2023-11-10T22:33:13,605   copying build/lib.linux-armv7l-cpython-39/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,608   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-11-10T22:33:13,609   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-11-10T22:33:13,637   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2023-11-10T22:33:13,639   copying build/lib.linux-armv7l-cpython-39/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,643   copying build/lib.linux-armv7l-cpython-39/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,646   copying build/lib.linux-armv7l-cpython-39/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,649   copying build/lib.linux-armv7l-cpython-39/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,651   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,653   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-11-10T22:33:13,654   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-11-10T22:33:13,655   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-11-10T22:33:13,657   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-11-10T22:33:13,660   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-11-10T22:33:13,661   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2023-11-10T22:33:13,663   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2023-11-10T22:33:13,665   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-11-10T22:33:13,666   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-11-10T22:33:13,669   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-11-10T22:33:13,671   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-11-10T22:33:13,673   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2023-11-10T22:33:13,675   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-11-10T22:33:13,676   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-11-10T22:33:13,679   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2023-11-10T22:33:13,680   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,682   copying build/lib.linux-armv7l-cpython-39/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,684   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-11-10T22:33:13,685   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-11-10T22:33:13,688   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2023-11-10T22:33:13,717   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,737   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-11-10T22:33:13,738   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-11-10T22:33:13,739   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-11-10T22:33:13,742   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-11-10T22:33:13,743   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-11-10T22:33:13,745   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2023-11-10T22:33:13,747   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-11-10T22:33:13,749   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-11-10T22:33:13,752   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-11-10T22:33:13,754   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-11-10T22:33:13,756   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-11-10T22:33:13,757   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2023-11-10T22:33:13,760   copying build/lib.linux-armv7l-cpython-39/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,761   copying build/lib.linux-armv7l-cpython-39/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,763   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,814   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,835   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,856   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,859   copying build/lib.linux-armv7l-cpython-39/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,860   copying build/lib.linux-armv7l-cpython-39/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,863   copying build/lib.linux-armv7l-cpython-39/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:13,865   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-11-10T22:33:13,866   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-11-10T22:33:13,868   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2023-11-10T22:33:13,892   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2023-11-10T22:33:13,893   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-11-10T22:33:13,895   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2023-11-10T22:33:13,897   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2023-11-10T22:33:13,901   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,902   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,904   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,906   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,908   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,910   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,912   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,914   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,916   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,918   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,919   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,921   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,923   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,925   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,927   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,929   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,931   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,933   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,934   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,937   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,938   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,940   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,942   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,944   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,946   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,948   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,949   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,951   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,953   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,956   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,958   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,959   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,961   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,963   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,966   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,967   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,969   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,971   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,973   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,975   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,977   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,979   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,981   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,982   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,984   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,986   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,988   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,989   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,991   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,993   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,994   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,996   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:13,998   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,000   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,002   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,003   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,005   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,007   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,008   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,010   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,012   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,014   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,016   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,018   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,020   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,022   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,025   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,027   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,029   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,031   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,033   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,036   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,038   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,040   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,042   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,044   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,046   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,049   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,051   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,053   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,055   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,058   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,060   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,062   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,064   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,066   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,068   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,071   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,073   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,075   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,077   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,079   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,081   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,083   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,086   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,088   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,090   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,092   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,095   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,097   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,099   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,102   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,104   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,107   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,109   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,111   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,113   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,116   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,118   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,120   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,122   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,124   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,125   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,128   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,129   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,131   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,132   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,134   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,136   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,138   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,139   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,141   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,143   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,144   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,146   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,148   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,150   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,152   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,154   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,155   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,157   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,159   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,161   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,162   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,164   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,166   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,168   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,170   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,171   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,173   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,176   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,177   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,179   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,181   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,183   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,184   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,186   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,188   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,190   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,192   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,194   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,196   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,198   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,200   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,202   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,204   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,205   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,207   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,209   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,211   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,213   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,214   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,216   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,218   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,220   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,222   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,223   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,225   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,227   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,228   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,230   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,232   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,234   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,236   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,237   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,239   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2023-11-10T22:33:14,241   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-11-10T22:33:14,244   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-11-10T22:33:14,245   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2023-11-10T22:33:14,443   copying build/lib.linux-armv7l-cpython-39/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:14,445   copying build/lib.linux-armv7l-cpython-39/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:14,448   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,448   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,451   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,453   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,456   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,458   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,460   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,462   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,465   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,467   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,470   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,472   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,474   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,476   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,478   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,481   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2023-11-10T22:33:14,483   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:14,505   copying build/lib.linux-armv7l-cpython-39/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:14,507   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:14,539   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:14,541   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-11-10T22:33:14,542   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-11-10T22:33:14,563   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-11-10T22:33:14,565   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-11-10T22:33:14,566   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2023-11-10T22:33:14,572   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-11-10T22:33:14,573   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2023-11-10T22:33:14,575   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2023-11-10T22:33:14,577   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-11-10T22:33:14,578   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-11-10T22:33:14,597   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2023-11-10T22:33:14,599   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2023-11-10T22:33:14,627   running install_egg_info
2023-11-10T22:33:14,634   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.8.7-py3.9.egg-info
2023-11-10T22:33:14,647   running install_scripts
2023-11-10T22:33:14,695   creating build/bdist.linux-armv7l/wheel/moleculekit-1.8.7.dist-info/WHEEL
2023-11-10T22:33:14,698   creating '/tmp/pip-wheel-0ucj5w0i/.tmp-3wf2ljiz/moleculekit-1.8.7-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-11-10T22:33:14,700   adding 'moleculekit/__init__.py'
2023-11-10T22:33:14,702   adding 'moleculekit/_version.py'
2023-11-10T22:33:14,703   adding 'moleculekit/align.py'
2023-11-10T22:33:15,046   adding 'moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:15,059   adding 'moleculekit/bondguesser.py'
2023-11-10T22:33:15,302   adding 'moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:15,311   adding 'moleculekit/config.py'
2023-11-10T22:33:15,312   adding 'moleculekit/dihedral.py'
2023-11-10T22:33:15,314   adding 'moleculekit/distance.py'
2023-11-10T22:33:15,632   adding 'moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:15,643   adding 'moleculekit/home.py'
2023-11-10T22:33:15,644   adding 'moleculekit/logging.ini'
2023-11-10T22:33:15,658   adding 'moleculekit/molecule.py'
2023-11-10T22:33:15,884   adding 'moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:15,893   adding 'moleculekit/opm.py'
2023-11-10T22:33:15,895   adding 'moleculekit/periodictable.py'
2023-11-10T22:33:15,896   adding 'moleculekit/pymolgraphics.py'
2023-11-10T22:33:15,898   adding 'moleculekit/rcsb.py'
2023-11-10T22:33:15,899   adding 'moleculekit/rdkitintegration.py'
2023-11-10T22:33:15,911   adding 'moleculekit/readers.py'
2023-11-10T22:33:16,513   adding 'moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:16,537   adding 'moleculekit/util.py'
2023-11-10T22:33:16,538   adding 'moleculekit/version.py'
2023-11-10T22:33:16,540   adding 'moleculekit/viewer.py'
2023-11-10T22:33:16,541   adding 'moleculekit/vmd_wrapper'
2023-11-10T22:33:16,543   adding 'moleculekit/vmdgraphics.py'
2023-11-10T22:33:16,545   adding 'moleculekit/vmdviewer.py'
2023-11-10T22:33:16,797   adding 'moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:16,811   adding 'moleculekit/writers.py'
2023-11-10T22:33:17,077   adding 'moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:17,087   adding 'moleculekit/atomselect/__init__.py'
2023-11-10T22:33:17,089   adding 'moleculekit/atomselect/analyze.py'
2023-11-10T22:33:17,091   adding 'moleculekit/atomselect/atomselect.py'
2023-11-10T22:33:17,093   adding 'moleculekit/atomselect/languageparser.py'
2023-11-10T22:33:17,196   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2023-11-10T22:33:17,208   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2023-11-10T22:33:17,299   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2023-11-10T22:33:17,308   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2023-11-10T22:33:17,409   adding 'moleculekit/distance_utils/distance_utils.cpp'
2023-11-10T22:33:17,420   adding 'moleculekit/distance_utils/distance_utils.pyx'
2023-11-10T22:33:17,422   adding 'moleculekit/interactions/__init__.py'
2023-11-10T22:33:17,705   adding 'moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:17,974   adding 'moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:17,986   adding 'moleculekit/interactions/interactions.py'
2023-11-10T22:33:18,266   adding 'moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:18,553   adding 'moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so'
2023-11-10T22:33:18,654   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2023-11-10T22:33:18,663   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2023-11-10T22:33:18,754   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2023-11-10T22:33:18,763   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2023-11-10T22:33:18,855   adding 'moleculekit/interactions/pipi/pipi.cpp'
2023-11-10T22:33:18,864   adding 'moleculekit/interactions/pipi/pipi.pyx'
2023-11-10T22:33:18,956   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2023-11-10T22:33:18,965   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2023-11-10T22:33:19,052   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2023-11-10T22:33:19,060   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2023-11-10T22:33:19,062   adding 'moleculekit/pdbx/__init__.py'
2023-11-10T22:33:19,066   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2023-11-10T22:33:19,068   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2023-11-10T22:33:19,071   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2023-11-10T22:33:19,072   adding 'moleculekit/pdbx/reader/__init__.py'
2023-11-10T22:33:19,074   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2023-11-10T22:33:19,076   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2023-11-10T22:33:19,077   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2023-11-10T22:33:19,078   adding 'moleculekit/pdbx/tests/__init__.py'
2023-11-10T22:33:19,080   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2023-11-10T22:33:19,081   adding 'moleculekit/pdbx/writer/__init__.py'
2023-11-10T22:33:19,083   adding 'moleculekit/ply/__init__.py'
2023-11-10T22:33:19,087   adding 'moleculekit/ply/lex.py'
2023-11-10T22:33:19,099   adding 'moleculekit/ply/yacc.py'
2023-11-10T22:33:19,102   adding 'moleculekit/projections/__init__.py'
2023-11-10T22:33:19,104   adding 'moleculekit/projections/metriccoordinate.py'
2023-11-10T22:33:19,107   adding 'moleculekit/projections/metricdihedral.py'
2023-11-10T22:33:19,111   adding 'moleculekit/projections/metricdistance.py'
2023-11-10T22:33:19,113   adding 'moleculekit/projections/metricfluctuation.py'
2023-11-10T22:33:19,115   adding 'moleculekit/projections/metricgyration.py'
2023-11-10T22:33:19,119   adding 'moleculekit/projections/metricplumed2.py'
2023-11-10T22:33:19,120   adding 'moleculekit/projections/metricrmsd.py'
2023-11-10T22:33:19,122   adding 'moleculekit/projections/metricsasa.py'
2023-11-10T22:33:19,124   adding 'moleculekit/projections/metricsecondarystructure.py'
2023-11-10T22:33:19,126   adding 'moleculekit/projections/metricshell.py'
2023-11-10T22:33:19,128   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2023-11-10T22:33:19,130   adding 'moleculekit/projections/metrictmscore.py'
2023-11-10T22:33:19,131   adding 'moleculekit/projections/projection.py'
2023-11-10T22:33:19,132   adding 'moleculekit/projections/util.py'
2023-11-10T22:33:19,134   adding 'moleculekit/share/ALA.cif'
2023-11-10T22:33:19,136   adding 'moleculekit/share/backbone.cif'
2023-11-10T22:33:20,445   adding 'moleculekit/share/opm_sequences.json'
2023-11-10T22:33:20,532   adding 'moleculekit/share/atomselect/atomselect.json'
2023-11-10T22:33:20,538   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2023-11-10T22:33:20,539   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2023-11-10T22:33:20,540   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2023-11-10T22:33:20,541   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2023-11-10T22:33:20,543   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2023-11-10T22:33:20,544   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2023-11-10T22:33:20,545   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2023-11-10T22:33:20,546   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2023-11-10T22:33:20,548   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2023-11-10T22:33:20,549   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2023-11-10T22:33:20,550   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2023-11-10T22:33:20,552   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2023-11-10T22:33:20,553   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2023-11-10T22:33:20,554   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2023-11-10T22:33:20,555   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2023-11-10T22:33:20,557   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2023-11-10T22:33:20,558   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2023-11-10T22:33:20,559   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2023-11-10T22:33:20,560   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2023-11-10T22:33:20,562   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2023-11-10T22:33:20,563   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2023-11-10T22:33:20,564   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2023-11-10T22:33:20,566   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2023-11-10T22:33:20,567   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2023-11-10T22:33:20,568   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2023-11-10T22:33:20,569   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2023-11-10T22:33:20,571   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2023-11-10T22:33:20,572   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2023-11-10T22:33:20,573   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2023-11-10T22:33:20,574   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2023-11-10T22:33:20,576   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2023-11-10T22:33:20,577   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2023-11-10T22:33:20,578   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2023-11-10T22:33:20,579   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2023-11-10T22:33:20,581   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2023-11-10T22:33:20,582   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2023-11-10T22:33:20,583   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2023-11-10T22:33:20,584   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2023-11-10T22:33:20,586   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2023-11-10T22:33:20,587   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2023-11-10T22:33:20,588   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2023-11-10T22:33:20,589   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2023-11-10T22:33:20,591   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2023-11-10T22:33:20,592   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2023-11-10T22:33:20,593   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2023-11-10T22:33:20,594   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2023-11-10T22:33:20,596   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2023-11-10T22:33:20,597   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2023-11-10T22:33:20,598   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2023-11-10T22:33:20,600   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2023-11-10T22:33:20,601   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2023-11-10T22:33:20,602   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2023-11-10T22:33:20,603   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2023-11-10T22:33:20,605   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2023-11-10T22:33:20,606   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2023-11-10T22:33:20,607   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2023-11-10T22:33:20,608   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2023-11-10T22:33:20,610   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2023-11-10T22:33:20,611   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2023-11-10T22:33:20,612   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2023-11-10T22:33:20,614   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2023-11-10T22:33:20,615   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2023-11-10T22:33:20,616   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2023-11-10T22:33:20,617   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2023-11-10T22:33:20,619   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2023-11-10T22:33:20,620   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2023-11-10T22:33:20,621   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2023-11-10T22:33:20,622   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2023-11-10T22:33:20,624   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2023-11-10T22:33:20,625   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2023-11-10T22:33:20,626   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2023-11-10T22:33:20,627   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2023-11-10T22:33:20,629   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2023-11-10T22:33:20,630   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2023-11-10T22:33:20,631   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2023-11-10T22:33:20,632   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2023-11-10T22:33:20,633   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2023-11-10T22:33:20,635   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2023-11-10T22:33:20,636   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2023-11-10T22:33:20,637   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2023-11-10T22:33:20,639   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2023-11-10T22:33:20,640   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2023-11-10T22:33:20,641   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2023-11-10T22:33:20,642   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2023-11-10T22:33:20,644   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2023-11-10T22:33:20,645   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2023-11-10T22:33:20,647   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2023-11-10T22:33:20,648   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2023-11-10T22:33:20,649   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2023-11-10T22:33:20,650   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2023-11-10T22:33:20,652   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2023-11-10T22:33:20,653   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2023-11-10T22:33:20,654   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2023-11-10T22:33:20,655   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2023-11-10T22:33:20,657   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2023-11-10T22:33:20,658   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2023-11-10T22:33:20,659   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2023-11-10T22:33:20,660   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2023-11-10T22:33:20,662   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2023-11-10T22:33:20,663   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2023-11-10T22:33:20,664   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2023-11-10T22:33:20,666   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2023-11-10T22:33:20,667   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2023-11-10T22:33:20,668   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2023-11-10T22:33:20,669   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2023-11-10T22:33:20,671   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2023-11-10T22:33:20,672   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2023-11-10T22:33:20,673   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2023-11-10T22:33:20,675   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2023-11-10T22:33:20,676   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2023-11-10T22:33:20,677   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2023-11-10T22:33:20,678   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2023-11-10T22:33:20,680   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2023-11-10T22:33:20,681   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2023-11-10T22:33:20,682   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2023-11-10T22:33:20,683   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2023-11-10T22:33:20,685   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2023-11-10T22:33:20,686   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2023-11-10T22:33:20,687   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2023-11-10T22:33:20,688   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2023-11-10T22:33:20,690   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2023-11-10T22:33:20,691   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2023-11-10T22:33:20,692   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2023-11-10T22:33:20,693   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2023-11-10T22:33:20,695   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2023-11-10T22:33:20,696   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2023-11-10T22:33:20,697   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2023-11-10T22:33:20,698   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2023-11-10T22:33:20,700   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2023-11-10T22:33:20,701   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2023-11-10T22:33:20,702   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2023-11-10T22:33:20,703   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2023-11-10T22:33:20,705   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2023-11-10T22:33:20,706   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2023-11-10T22:33:20,707   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2023-11-10T22:33:20,709   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2023-11-10T22:33:20,710   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2023-11-10T22:33:20,711   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2023-11-10T22:33:20,712   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2023-11-10T22:33:20,713   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2023-11-10T22:33:20,715   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2023-11-10T22:33:20,716   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2023-11-10T22:33:20,717   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2023-11-10T22:33:20,718   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2023-11-10T22:33:20,720   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2023-11-10T22:33:20,721   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2023-11-10T22:33:20,722   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2023-11-10T22:33:20,723   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2023-11-10T22:33:20,724   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2023-11-10T22:33:20,726   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2023-11-10T22:33:20,727   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2023-11-10T22:33:20,728   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2023-11-10T22:33:20,729   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2023-11-10T22:33:20,731   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2023-11-10T22:33:20,732   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2023-11-10T22:33:20,733   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2023-11-10T22:33:20,735   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2023-11-10T22:33:20,736   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2023-11-10T22:33:20,737   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2023-11-10T22:33:20,738   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2023-11-10T22:33:20,740   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2023-11-10T22:33:20,741   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2023-11-10T22:33:20,742   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2023-11-10T22:33:20,743   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2023-11-10T22:33:20,745   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2023-11-10T22:33:20,746   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2023-11-10T22:33:20,747   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2023-11-10T22:33:20,748   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2023-11-10T22:33:20,750   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2023-11-10T22:33:20,751   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2023-11-10T22:33:20,752   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2023-11-10T22:33:20,753   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2023-11-10T22:33:20,755   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2023-11-10T22:33:20,756   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2023-11-10T22:33:20,757   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2023-11-10T22:33:20,759   adding 'moleculekit/smallmol/__init__.py'
2023-11-10T22:33:20,764   adding 'moleculekit/smallmol/smallmol.py'
2023-11-10T22:33:20,767   adding 'moleculekit/smallmol/smallmollib.py'
2023-11-10T22:33:20,769   adding 'moleculekit/smallmol/test_smallmol.py'
2023-11-10T22:33:20,771   adding 'moleculekit/smallmol/test_smallmollib.py'
2023-11-10T22:33:20,773   adding 'moleculekit/smallmol/util.py'
2023-11-10T22:33:20,775   adding 'moleculekit/smallmol/tools/__init__.py'
2023-11-10T22:33:20,776   adding 'moleculekit/smallmol/tools/clustering.py'
2023-11-10T22:33:20,778   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2023-11-10T22:33:20,780   adding 'moleculekit/smallmol/tools/test_tools.py'
2023-11-10T22:33:20,870   adding 'moleculekit/tmalign/tmalign_util.cpp'
2023-11-10T22:33:20,878   adding 'moleculekit/tmalign/tmalign_util.pyx'
2023-11-10T22:33:20,880   adding 'moleculekit/tmalign/tmalignlib.pxd'
2023-11-10T22:33:20,881   adding 'moleculekit/tmalign/include/TMAlign.h'
2023-11-10T22:33:20,899   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2023-11-10T22:33:20,902   adding 'moleculekit/tools/__init__.py'
2023-11-10T22:33:20,904   adding 'moleculekit/tools/atomtyper.py'
2023-11-10T22:33:20,906   adding 'moleculekit/tools/autosegment.py'
2023-11-10T22:33:20,908   adding 'moleculekit/tools/crystalpacking.py'
2023-11-10T22:33:20,912   adding 'moleculekit/tools/detect.py'
2023-11-10T22:33:20,914   adding 'moleculekit/tools/docking.py'
2023-11-10T22:33:20,916   adding 'moleculekit/tools/graphalignment.py'
2023-11-10T22:33:20,918   adding 'moleculekit/tools/hhblitsprofile.py'
2023-11-10T22:33:20,919   adding 'moleculekit/tools/moleculechecks.py'
2023-11-10T22:33:20,925   adding 'moleculekit/tools/preparation.py'
2023-11-10T22:33:20,928   adding 'moleculekit/tools/preparation_customres.py'
2023-11-10T22:33:20,930   adding 'moleculekit/tools/sequencestructuralalignment.py'
2023-11-10T22:33:20,933   adding 'moleculekit/tools/voxeldescriptors.py'
2023-11-10T22:33:20,935   adding 'moleculekit/tools/obabel_tools/__init__.py'
2023-11-10T22:33:20,936   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2023-11-10T22:33:21,028   adding 'moleculekit/wrapping/wrapping.cpp'
2023-11-10T22:33:21,037   adding 'moleculekit/wrapping/wrapping.pyx'
2023-11-10T22:33:21,127   adding 'moleculekit/xtc_utils/xtc.cpp'
2023-11-10T22:33:21,136   adding 'moleculekit/xtc_utils/xtc.pyx'
2023-11-10T22:33:21,137   adding 'moleculekit/xtc_utils/xtclib.pxd'
2023-11-10T22:33:21,140   adding 'moleculekit/xtc_utils/include/xdrfile.h'
2023-11-10T22:33:21,141   adding 'moleculekit/xtc_utils/include/xdrfile_xtc.h'
2023-11-10T22:33:21,143   adding 'moleculekit/xtc_utils/include/xtc.h'
2023-11-10T22:33:21,150   adding 'moleculekit/xtc_utils/src/xdrfile.cpp'
2023-11-10T22:33:21,151   adding 'moleculekit/xtc_utils/src/xdrfile_xtc.cpp'
2023-11-10T22:33:21,154   adding 'moleculekit/xtc_utils/src/xtc.cpp'
2023-11-10T22:33:21,156   adding 'moleculekit-1.8.7.dist-info/LICENSE'
2023-11-10T22:33:21,157   adding 'moleculekit-1.8.7.dist-info/METADATA'
2023-11-10T22:33:21,158   adding 'moleculekit-1.8.7.dist-info/WHEEL'
2023-11-10T22:33:21,159   adding 'moleculekit-1.8.7.dist-info/top_level.txt'
2023-11-10T22:33:21,164   adding 'moleculekit-1.8.7.dist-info/RECORD'
2023-11-10T22:33:21,298   removing build/bdist.linux-armv7l/wheel
2023-11-10T22:33:21,571   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2023-11-10T22:33:21,855   Created wheel for moleculekit: filename=moleculekit-1.8.7-cp39-cp39-linux_armv7l.whl size=12627708 sha256=2570ddd097174d00c80ea92b4757c0de681fae3d7b15cd5d630d5e0365ceebbc
2023-11-10T22:33:21,856   Stored in directory: /tmp/pip-ephem-wheel-cache-8eti_d6k/wheels/e1/08/39/c36aebcf8954bf4903ef5ec5483302221022839a9886f9081a
2023-11-10T22:33:21,881 Successfully built moleculekit
2023-11-10T22:33:22,187 Removed build tracker: '/tmp/pip-build-tracker-fzp_xtz2'