2023-11-23T03:25:03,443 Created temporary directory: /tmp/pip-build-tracker-zec2kbz6 2023-11-23T03:25:03,444 Initialized build tracking at /tmp/pip-build-tracker-zec2kbz6 2023-11-23T03:25:03,445 Created build tracker: /tmp/pip-build-tracker-zec2kbz6 2023-11-23T03:25:03,446 Entered build tracker: /tmp/pip-build-tracker-zec2kbz6 2023-11-23T03:25:03,446 Created temporary directory: /tmp/pip-wheel-rlxmv66u 2023-11-23T03:25:03,450 Created temporary directory: /tmp/pip-ephem-wheel-cache-4bzh0ajg 2023-11-23T03:25:03,471 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-23T03:25:03,475 2 location(s) to search for versions of staver: 2023-11-23T03:25:03,475 * https://pypi.org/simple/staver/ 2023-11-23T03:25:03,475 * https://www.piwheels.org/simple/staver/ 2023-11-23T03:25:03,476 Fetching project page and analyzing links: https://pypi.org/simple/staver/ 2023-11-23T03:25:03,476 Getting page https://pypi.org/simple/staver/ 2023-11-23T03:25:03,478 Found index url https://pypi.org/simple/ 2023-11-23T03:25:03,734 Fetched page https://pypi.org/simple/staver/ as application/vnd.pypi.simple.v1+json 2023-11-23T03:25:03,735 Skipping link: No binaries permitted for staver: https://files.pythonhosted.org/packages/e8/43/fd27fec56e90139ead88a66bbcaad9e9cc2c5c081436cfa50c5617f29ffd/staver-0.1.2-py2.py3-none-any.whl (from https://pypi.org/simple/staver/) (requires-python:>=3.6) 2023-11-23T03:25:03,736 Found link https://files.pythonhosted.org/packages/42/c3/5617196d4e5a1fcec97d569a6774b5fe9119a5713707c36359411f45c463/staver-0.1.2.tar.gz (from https://pypi.org/simple/staver/) (requires-python:>=3.6), version: 0.1.2 2023-11-23T03:25:03,737 Skipping link: No binaries permitted for staver: https://files.pythonhosted.org/packages/13/e1/785064c95dbefb11c047b71a4fff5373b4a1ac1aa80f9079333a9a6ef666/staver-0.1.3-py2.py3-none-any.whl (from https://pypi.org/simple/staver/) (requires-python:>=3.6) 2023-11-23T03:25:03,738 Found link https://files.pythonhosted.org/packages/44/7d/5a6fcdd1cfb8ceff69535c3eaa1a6db75abd9738d6e9769645082ce80711/staver-0.1.3.tar.gz (from https://pypi.org/simple/staver/) (requires-python:>=3.6), version: 0.1.3 2023-11-23T03:25:03,739 Fetching project page and analyzing links: https://www.piwheels.org/simple/staver/ 2023-11-23T03:25:03,739 Getting page https://www.piwheels.org/simple/staver/ 2023-11-23T03:25:03,740 Found index url https://www.piwheels.org/simple/ 2023-11-23T03:25:03,918 Fetched page https://www.piwheels.org/simple/staver/ as text/html 2023-11-23T03:25:03,919 Skipping link: not a file: https://www.piwheels.org/simple/staver/ 2023-11-23T03:25:03,920 Skipping link: not a file: https://pypi.org/simple/staver/ 2023-11-23T03:25:03,939 Given no hashes to check 1 links for project 'staver': discarding no candidates 2023-11-23T03:25:03,959 Collecting staver==0.1.2 2023-11-23T03:25:03,961 Created temporary directory: /tmp/pip-unpack-gkryi54d 2023-11-23T03:25:04,969 Downloading staver-0.1.2.tar.gz (6.4 MB) 2023-11-23T03:25:06,951 Added staver==0.1.2 from https://files.pythonhosted.org/packages/42/c3/5617196d4e5a1fcec97d569a6774b5fe9119a5713707c36359411f45c463/staver-0.1.2.tar.gz to build tracker '/tmp/pip-build-tracker-zec2kbz6' 2023-11-23T03:25:06,953 Running setup.py (path:/tmp/pip-wheel-rlxmv66u/staver_7ff0ea7a835c4eed8f07f110ee30cf14/setup.py) egg_info for package staver 2023-11-23T03:25:06,954 Created temporary directory: /tmp/pip-pip-egg-info-45h_f3i8 2023-11-23T03:25:06,955 Preparing metadata (setup.py): started 2023-11-23T03:25:06,956 Running command python setup.py egg_info 2023-11-23T03:25:08,016 running egg_info 2023-11-23T03:25:08,018 creating /tmp/pip-pip-egg-info-45h_f3i8/staver.egg-info 2023-11-23T03:25:08,041 writing /tmp/pip-pip-egg-info-45h_f3i8/staver.egg-info/PKG-INFO 2023-11-23T03:25:08,045 writing dependency_links to /tmp/pip-pip-egg-info-45h_f3i8/staver.egg-info/dependency_links.txt 2023-11-23T03:25:08,047 writing entry points to /tmp/pip-pip-egg-info-45h_f3i8/staver.egg-info/entry_points.txt 2023-11-23T03:25:08,048 writing top-level names to /tmp/pip-pip-egg-info-45h_f3i8/staver.egg-info/top_level.txt 2023-11-23T03:25:08,050 writing manifest file '/tmp/pip-pip-egg-info-45h_f3i8/staver.egg-info/SOURCES.txt' 2023-11-23T03:25:08,127 reading manifest file '/tmp/pip-pip-egg-info-45h_f3i8/staver.egg-info/SOURCES.txt' 2023-11-23T03:25:08,128 reading manifest template 'MANIFEST.in' 2023-11-23T03:25:08,130 warning: no files found matching 'README.rst' 2023-11-23T03:25:08,135 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-11-23T03:25:08,135 warning: no previously-included files matching '*.py[co]' found under directory '*' 2023-11-23T03:25:08,204 warning: no files found matching '*.jpg' under directory 'docs' 2023-11-23T03:25:08,239 warning: no files found matching '*.gif' under directory 'docs' 2023-11-23T03:25:08,240 adding license file 'LICENSE' 2023-11-23T03:25:08,240 adding license file 'AUTHORS.rst' 2023-11-23T03:25:08,244 writing manifest file '/tmp/pip-pip-egg-info-45h_f3i8/staver.egg-info/SOURCES.txt' 2023-11-23T03:25:08,354 Preparing metadata (setup.py): finished with status 'done' 2023-11-23T03:25:08,357 Source in /tmp/pip-wheel-rlxmv66u/staver_7ff0ea7a835c4eed8f07f110ee30cf14 has version 0.1.2, which satisfies requirement staver==0.1.2 from https://files.pythonhosted.org/packages/42/c3/5617196d4e5a1fcec97d569a6774b5fe9119a5713707c36359411f45c463/staver-0.1.2.tar.gz 2023-11-23T03:25:08,358 Removed staver==0.1.2 from https://files.pythonhosted.org/packages/42/c3/5617196d4e5a1fcec97d569a6774b5fe9119a5713707c36359411f45c463/staver-0.1.2.tar.gz from build tracker '/tmp/pip-build-tracker-zec2kbz6' 2023-11-23T03:25:08,364 Created temporary directory: /tmp/pip-unpack-u0e7_8vp 2023-11-23T03:25:08,365 Created temporary directory: /tmp/pip-unpack-58bpteol 2023-11-23T03:25:08,368 Building wheels for collected packages: staver 2023-11-23T03:25:08,372 Created temporary directory: /tmp/pip-wheel-m_jg1685 2023-11-23T03:25:08,373 Building wheel for staver (setup.py): started 2023-11-23T03:25:08,374 Destination directory: /tmp/pip-wheel-m_jg1685 2023-11-23T03:25:08,375 Running command python setup.py bdist_wheel 2023-11-23T03:25:09,410 running bdist_wheel 2023-11-23T03:25:09,507 running build 2023-11-23T03:25:09,507 running build_py 2023-11-23T03:25:09,535 creating build 2023-11-23T03:25:09,536 creating build/lib 2023-11-23T03:25:09,537 creating build/lib/staver 2023-11-23T03:25:09,538 copying staver/__init__.py -> build/lib/staver 2023-11-23T03:25:09,540 copying staver/staver_pipeline.py -> build/lib/staver 2023-11-23T03:25:09,542 copying staver/batch_rename.py -> build/lib/staver 2023-11-23T03:25:09,544 copying staver/preprocessing.py -> build/lib/staver 2023-11-23T03:25:09,546 copying staver/peptide_scoring.py -> build/lib/staver 2023-11-23T03:25:09,548 copying staver/DIANN_quantification_L_20200210.py -> build/lib/staver 2023-11-23T03:25:09,550 copying staver/EDA.py -> build/lib/staver 2023-11-23T03:25:09,552 copying staver/utils.py -> build/lib/staver 2023-11-23T03:25:09,555 copying staver/cli_download_pride_data.py -> build/lib/staver 2023-11-23T03:25:09,557 copying staver/staver.py -> build/lib/staver 2023-11-23T03:25:09,559 copying staver/protein_dynamic_range.py -> build/lib/staver 2023-11-23T03:25:09,561 copying staver/download_pride_data.py -> build/lib/staver 2023-11-23T03:25:09,564 copying staver/score_rank.py -> build/lib/staver 2023-11-23T03:25:09,565 copying staver/MaxLFQ.py -> build/lib/staver 2023-11-23T03:25:09,568 copying staver/MissingValueHandler.py -> build/lib/staver 2023-11-23T03:25:09,570 copying staver/merge_data.py -> build/lib/staver 2023-11-23T03:25:09,572 copying staver/get_filename_size.py -> build/lib/staver 2023-11-23T03:25:09,573 copying staver/data.py -> build/lib/staver 2023-11-23T03:25:09,576 copying staver/protein_accumulation_plots.py -> build/lib/staver 2023-11-23T03:25:09,578 copying staver/benchmark_model.py -> build/lib/staver 2023-11-23T03:25:09,580 copying staver/get_low_CI_peptides.py -> build/lib/staver 2023-11-23T03:25:09,582 copying staver/plots.py -> build/lib/staver 2023-11-23T03:25:09,584 copying staver/PeptideToProteinInference.py -> build/lib/staver 2023-11-23T03:25:09,586 copying staver/HighCIPeptides.py -> build/lib/staver 2023-11-23T03:25:09,588 running egg_info 2023-11-23T03:25:09,644 writing staver.egg-info/PKG-INFO 2023-11-23T03:25:09,647 writing dependency_links to staver.egg-info/dependency_links.txt 2023-11-23T03:25:09,648 writing entry points to staver.egg-info/entry_points.txt 2023-11-23T03:25:09,650 writing top-level names to staver.egg-info/top_level.txt 2023-11-23T03:25:09,677 reading manifest file 'staver.egg-info/SOURCES.txt' 2023-11-23T03:25:09,681 reading manifest template 'MANIFEST.in' 2023-11-23T03:25:09,682 warning: no files found matching 'README.rst' 2023-11-23T03:25:09,687 warning: no previously-included files matching '__pycache__' found under directory '*' 2023-11-23T03:25:09,688 warning: no previously-included files matching '*.py[co]' found under directory '*' 2023-11-23T03:25:09,751 warning: no files found matching '*.jpg' under directory 'docs' 2023-11-23T03:25:09,786 warning: no files found matching '*.gif' under directory 'docs' 2023-11-23T03:25:09,787 adding license file 'LICENSE' 2023-11-23T03:25:09,787 adding license file 'AUTHORS.rst' 2023-11-23T03:25:09,792 writing manifest file 'staver.egg-info/SOURCES.txt' 2023-11-23T03:25:09,821 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-11-23T03:25:09,822 !! 2023-11-23T03:25:09,823 ******************************************************************************** 2023-11-23T03:25:09,823 Please avoid running ``setup.py`` directly. 2023-11-23T03:25:09,824 Instead, use pypa/build, pypa/installer or other 2023-11-23T03:25:09,825 standards-based tools. 2023-11-23T03:25:09,826 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-11-23T03:25:09,826 ******************************************************************************** 2023-11-23T03:25:09,828 !! 2023-11-23T03:25:09,828 self.initialize_options() 2023-11-23T03:25:09,847 installing to build/bdist.linux-armv7l/wheel 2023-11-23T03:25:09,848 running install 2023-11-23T03:25:09,872 running install_lib 2023-11-23T03:25:09,897 creating build/bdist.linux-armv7l 2023-11-23T03:25:09,898 creating build/bdist.linux-armv7l/wheel 2023-11-23T03:25:09,899 creating build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,900 copying build/lib/staver/__init__.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,902 copying build/lib/staver/staver_pipeline.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,905 copying build/lib/staver/batch_rename.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,907 copying build/lib/staver/preprocessing.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,910 copying build/lib/staver/peptide_scoring.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,912 copying build/lib/staver/DIANN_quantification_L_20200210.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,915 copying build/lib/staver/EDA.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,917 copying build/lib/staver/utils.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,920 copying build/lib/staver/cli_download_pride_data.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,922 copying build/lib/staver/staver.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,924 copying build/lib/staver/protein_dynamic_range.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,927 copying build/lib/staver/download_pride_data.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,929 copying build/lib/staver/score_rank.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,931 copying build/lib/staver/MaxLFQ.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,933 copying build/lib/staver/MissingValueHandler.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,935 copying build/lib/staver/merge_data.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,937 copying build/lib/staver/get_filename_size.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,939 copying build/lib/staver/data.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,941 copying build/lib/staver/protein_accumulation_plots.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,943 copying build/lib/staver/benchmark_model.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,946 copying build/lib/staver/get_low_CI_peptides.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,948 copying build/lib/staver/plots.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,950 copying build/lib/staver/PeptideToProteinInference.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,952 copying build/lib/staver/HighCIPeptides.py -> build/bdist.linux-armv7l/wheel/staver 2023-11-23T03:25:09,955 running install_egg_info 2023-11-23T03:25:09,987 Copying staver.egg-info to build/bdist.linux-armv7l/wheel/staver-0.1.2-py3.11.egg-info 2023-11-23T03:25:09,998 running install_scripts 2023-11-23T03:25:10,013 creating build/bdist.linux-armv7l/wheel/staver-0.1.2.dist-info/WHEEL 2023-11-23T03:25:10,015 creating '/tmp/pip-wheel-m_jg1685/staver-0.1.2-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-23T03:25:10,018 adding 'staver/DIANN_quantification_L_20200210.py' 2023-11-23T03:25:10,021 adding 'staver/EDA.py' 2023-11-23T03:25:10,023 adding 'staver/HighCIPeptides.py' 2023-11-23T03:25:10,026 adding 'staver/MaxLFQ.py' 2023-11-23T03:25:10,028 adding 'staver/MissingValueHandler.py' 2023-11-23T03:25:10,030 adding 'staver/PeptideToProteinInference.py' 2023-11-23T03:25:10,031 adding 'staver/__init__.py' 2023-11-23T03:25:10,033 adding 'staver/batch_rename.py' 2023-11-23T03:25:10,036 adding 'staver/benchmark_model.py' 2023-11-23T03:25:10,037 adding 'staver/cli_download_pride_data.py' 2023-11-23T03:25:10,039 adding 'staver/data.py' 2023-11-23T03:25:10,040 adding 'staver/download_pride_data.py' 2023-11-23T03:25:10,042 adding 'staver/get_filename_size.py' 2023-11-23T03:25:10,043 adding 'staver/get_low_CI_peptides.py' 2023-11-23T03:25:10,045 adding 'staver/merge_data.py' 2023-11-23T03:25:10,046 adding 'staver/peptide_scoring.py' 2023-11-23T03:25:10,049 adding 'staver/plots.py' 2023-11-23T03:25:10,051 adding 'staver/preprocessing.py' 2023-11-23T03:25:10,053 adding 'staver/protein_accumulation_plots.py' 2023-11-23T03:25:10,054 adding 'staver/protein_dynamic_range.py' 2023-11-23T03:25:10,056 adding 'staver/score_rank.py' 2023-11-23T03:25:10,058 adding 'staver/staver.py' 2023-11-23T03:25:10,060 adding 'staver/staver_pipeline.py' 2023-11-23T03:25:10,063 adding 'staver/utils.py' 2023-11-23T03:25:10,065 adding 'staver-0.1.2.dist-info/AUTHORS.rst' 2023-11-23T03:25:10,066 adding 'staver-0.1.2.dist-info/LICENSE' 2023-11-23T03:25:10,068 adding 'staver-0.1.2.dist-info/METADATA' 2023-11-23T03:25:10,069 adding 'staver-0.1.2.dist-info/WHEEL' 2023-11-23T03:25:10,070 adding 'staver-0.1.2.dist-info/entry_points.txt' 2023-11-23T03:25:10,071 adding 'staver-0.1.2.dist-info/top_level.txt' 2023-11-23T03:25:10,072 adding 'staver-0.1.2.dist-info/RECORD' 2023-11-23T03:25:10,074 removing build/bdist.linux-armv7l/wheel 2023-11-23T03:25:10,194 Building wheel for staver (setup.py): finished with status 'done' 2023-11-23T03:25:10,197 Created wheel for staver: filename=staver-0.1.2-py2.py3-none-any.whl size=73089 sha256=bbad82be51feaf174861e92c90f67544c426884a8a0868b7263ee09311c74a77 2023-11-23T03:25:10,198 Stored in directory: /tmp/pip-ephem-wheel-cache-4bzh0ajg/wheels/3a/c5/05/0ac53a595b14af720b2e2b8c377003d3130e151b9fd56d23de 2023-11-23T03:25:10,210 Successfully built staver 2023-11-23T03:25:10,215 Removed build tracker: '/tmp/pip-build-tracker-zec2kbz6'