2023-11-23T18:22:36,092 Created temporary directory: /tmp/pip-build-tracker-oxiiqy0y 2023-11-23T18:22:36,093 Initialized build tracking at /tmp/pip-build-tracker-oxiiqy0y 2023-11-23T18:22:36,093 Created build tracker: /tmp/pip-build-tracker-oxiiqy0y 2023-11-23T18:22:36,094 Entered build tracker: /tmp/pip-build-tracker-oxiiqy0y 2023-11-23T18:22:36,094 Created temporary directory: /tmp/pip-wheel-qok9i92x 2023-11-23T18:22:36,098 Created temporary directory: /tmp/pip-ephem-wheel-cache-ousio45a 2023-11-23T18:22:36,123 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-23T18:22:36,127 2 location(s) to search for versions of tfbs-footprinting3: 2023-11-23T18:22:36,127 * https://pypi.org/simple/tfbs-footprinting3/ 2023-11-23T18:22:36,127 * https://www.piwheels.org/simple/tfbs-footprinting3/ 2023-11-23T18:22:36,128 Fetching project page and analyzing links: https://pypi.org/simple/tfbs-footprinting3/ 2023-11-23T18:22:36,128 Getting page https://pypi.org/simple/tfbs-footprinting3/ 2023-11-23T18:22:36,130 Found index url https://pypi.org/simple/ 2023-11-23T18:22:36,380 Fetched page https://pypi.org/simple/tfbs-footprinting3/ as application/vnd.pypi.simple.v1+json 2023-11-23T18:22:36,383 Found link https://files.pythonhosted.org/packages/2c/aa/23f9efd1de4485eb539ed7c434656f9c4b60059c3d2ba4b3a57e44982d1e/TFBS_footprinting3-0.0.1.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.1 2023-11-23T18:22:36,384 Found link https://files.pythonhosted.org/packages/2e/e7/cfcc48100dbafc25b211a79bb31c8ef5358e80470eb45f33e80b8109ed7f/TFBS_footprinting3-0.0.2.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.2 2023-11-23T18:22:36,384 Found link https://files.pythonhosted.org/packages/69/e7/14fdb3196e90616f2200c03c42759b6ded4355f686e3c9aba31abd76b9e0/TFBS_footprinting3-0.0.3.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.3 2023-11-23T18:22:36,385 Found link https://files.pythonhosted.org/packages/86/67/70e403ccbb50277ea3ed6b3d6760755363012324df0ab11110cba7c19e46/TFBS_footprinting3-0.0.4.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.4 2023-11-23T18:22:36,386 Skipping link: No binaries permitted for tfbs-footprinting3: https://files.pythonhosted.org/packages/a1/cd/6b2353f1cff80e5592de477a3cb7de49e8509f6577ac731bd461e9c398a0/TFBS_footprinting3-0.0.5-py3-none-any.whl (from https://pypi.org/simple/tfbs-footprinting3/) 2023-11-23T18:22:36,386 Found link https://files.pythonhosted.org/packages/e7/51/4ddec91398719060f2756891ec2cd44abb689d0521b9819a2f953f5da768/TFBS_footprinting3-0.0.5.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.5 2023-11-23T18:22:36,387 Skipping link: No binaries permitted for tfbs-footprinting3: https://files.pythonhosted.org/packages/d2/9a/53d98ae336ec3f0707bffb86a40c5d89690bcc8353b58b32f301dc076ae9/TFBS_footprinting3-0.0.6-py3-none-any.whl (from https://pypi.org/simple/tfbs-footprinting3/) 2023-11-23T18:22:36,387 Found link https://files.pythonhosted.org/packages/75/37/9ae713213d71fb0cd39560a0fd505e78e2009577ed302c1682824034bce9/TFBS_footprinting3-0.0.6.tar.gz (from https://pypi.org/simple/tfbs-footprinting3/), version: 0.0.6 2023-11-23T18:22:36,388 Fetching project page and analyzing links: https://www.piwheels.org/simple/tfbs-footprinting3/ 2023-11-23T18:22:36,389 Getting page https://www.piwheels.org/simple/tfbs-footprinting3/ 2023-11-23T18:22:36,390 Found index url https://www.piwheels.org/simple/ 2023-11-23T18:22:36,558 Fetched page https://www.piwheels.org/simple/tfbs-footprinting3/ as text/html 2023-11-23T18:22:36,560 Skipping link: No binaries permitted for tfbs-footprinting3: https://www.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.4-py3-none-any.whl#sha256=2f6ae98ba9b84076f0b2b515e414d65c678c22ce701442b3e91ddbe323878089 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2023-11-23T18:22:36,561 Skipping link: No binaries permitted for tfbs-footprinting3: https://www.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.3-py3-none-any.whl#sha256=e3263a9f1a717db8c4c364a0ea610924100fc1a654f7972f86c005025fbe9af6 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2023-11-23T18:22:36,561 Skipping link: No binaries permitted for tfbs-footprinting3: https://www.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.2-py3-none-any.whl#sha256=3ed872282149b66339740cd50ba14f3dca78c7748427b2a9518f0b22316ee897 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2023-11-23T18:22:36,562 Skipping link: No binaries permitted for tfbs-footprinting3: https://www.piwheels.org/simple/tfbs-footprinting3/TFBS_footprinting3-0.0.1-py3-none-any.whl#sha256=d46244741f2f36f8a40d101675b8437dda7cf7cacc611958f17888d62b295405 (from https://www.piwheels.org/simple/tfbs-footprinting3/) 2023-11-23T18:22:36,563 Skipping link: not a file: https://www.piwheels.org/simple/tfbs-footprinting3/ 2023-11-23T18:22:36,563 Skipping link: not a file: https://pypi.org/simple/tfbs-footprinting3/ 2023-11-23T18:22:36,584 Given no hashes to check 1 links for project 'tfbs-footprinting3': discarding no candidates 2023-11-23T18:22:36,603 Collecting tfbs-footprinting3==0.0.5 2023-11-23T18:22:36,605 Created temporary directory: /tmp/pip-unpack-ps8xtcr8 2023-11-23T18:22:36,834 Downloading TFBS_footprinting3-0.0.5.tar.gz (3.9 MB) 2023-11-23T18:22:38,010 Added tfbs-footprinting3==0.0.5 from https://files.pythonhosted.org/packages/e7/51/4ddec91398719060f2756891ec2cd44abb689d0521b9819a2f953f5da768/TFBS_footprinting3-0.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-oxiiqy0y' 2023-11-23T18:22:38,012 Running setup.py (path:/tmp/pip-wheel-qok9i92x/tfbs-footprinting3_f60536eb5ada47e089c45b12305cf580/setup.py) egg_info for package tfbs-footprinting3 2023-11-23T18:22:38,013 Created temporary directory: /tmp/pip-pip-egg-info-jmt1pi87 2023-11-23T18:22:38,013 Preparing metadata (setup.py): started 2023-11-23T18:22:38,015 Running command python setup.py egg_info 2023-11-23T18:22:38,452 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-23T18:22:38,452 !! 2023-11-23T18:22:38,453 ******************************************************************************** 2023-11-23T18:22:38,454 Usage of dash-separated 'description-file' will not be supported in future 2023-11-23T18:22:38,454 versions. Please use the underscore name 'description_file' instead. 2023-11-23T18:22:38,456 This deprecation is overdue, please update your project and remove deprecated 2023-11-23T18:22:38,456 calls to avoid build errors in the future. 2023-11-23T18:22:38,457 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-23T18:22:38,458 ******************************************************************************** 2023-11-23T18:22:38,459 !! 2023-11-23T18:22:38,460 opt = self.warn_dash_deprecation(opt, section) 2023-11-23T18:22:38,976 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-23T18:22:38,976 !! 2023-11-23T18:22:38,977 ******************************************************************************** 2023-11-23T18:22:38,978 Usage of dash-separated 'description-file' will not be supported in future 2023-11-23T18:22:38,978 versions. Please use the underscore name 'description_file' instead. 2023-11-23T18:22:38,980 This deprecation is overdue, please update your project and remove deprecated 2023-11-23T18:22:38,980 calls to avoid build errors in the future. 2023-11-23T18:22:38,982 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-23T18:22:38,982 ******************************************************************************** 2023-11-23T18:22:38,983 !! 2023-11-23T18:22:38,984 opt = self.warn_dash_deprecation(opt, section) 2023-11-23T18:22:39,015 running egg_info 2023-11-23T18:22:39,017 creating /tmp/pip-pip-egg-info-jmt1pi87/TFBS_footprinting3.egg-info 2023-11-23T18:22:39,041 writing /tmp/pip-pip-egg-info-jmt1pi87/TFBS_footprinting3.egg-info/PKG-INFO 2023-11-23T18:22:39,045 writing dependency_links to /tmp/pip-pip-egg-info-jmt1pi87/TFBS_footprinting3.egg-info/dependency_links.txt 2023-11-23T18:22:39,046 writing entry points to /tmp/pip-pip-egg-info-jmt1pi87/TFBS_footprinting3.egg-info/entry_points.txt 2023-11-23T18:22:39,047 writing requirements to /tmp/pip-pip-egg-info-jmt1pi87/TFBS_footprinting3.egg-info/requires.txt 2023-11-23T18:22:39,048 writing top-level names to /tmp/pip-pip-egg-info-jmt1pi87/TFBS_footprinting3.egg-info/top_level.txt 2023-11-23T18:22:39,050 writing manifest file '/tmp/pip-pip-egg-info-jmt1pi87/TFBS_footprinting3.egg-info/SOURCES.txt' 2023-11-23T18:22:39,124 reading manifest file '/tmp/pip-pip-egg-info-jmt1pi87/TFBS_footprinting3.egg-info/SOURCES.txt' 2023-11-23T18:22:39,125 reading manifest template 'MANIFEST.in' 2023-11-23T18:22:39,126 warning: no files found matching 'sample_analysis/*' 2023-11-23T18:22:39,127 adding license file 'LICENSE' 2023-11-23T18:22:39,129 writing manifest file '/tmp/pip-pip-egg-info-jmt1pi87/TFBS_footprinting3.egg-info/SOURCES.txt' 2023-11-23T18:22:39,238 Preparing metadata (setup.py): finished with status 'done' 2023-11-23T18:22:39,243 Source in /tmp/pip-wheel-qok9i92x/tfbs-footprinting3_f60536eb5ada47e089c45b12305cf580 has version 0.0.5, which satisfies requirement tfbs-footprinting3==0.0.5 from https://files.pythonhosted.org/packages/e7/51/4ddec91398719060f2756891ec2cd44abb689d0521b9819a2f953f5da768/TFBS_footprinting3-0.0.5.tar.gz 2023-11-23T18:22:39,244 Removed tfbs-footprinting3==0.0.5 from https://files.pythonhosted.org/packages/e7/51/4ddec91398719060f2756891ec2cd44abb689d0521b9819a2f953f5da768/TFBS_footprinting3-0.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-oxiiqy0y' 2023-11-23T18:22:39,251 Created temporary directory: /tmp/pip-unpack-_pup2omd 2023-11-23T18:22:39,252 Created temporary directory: /tmp/pip-unpack-k0z3yp8m 2023-11-23T18:22:39,262 Building wheels for collected packages: tfbs-footprinting3 2023-11-23T18:22:39,266 Created temporary directory: /tmp/pip-wheel-b01vr6ux 2023-11-23T18:22:39,267 Building wheel for tfbs-footprinting3 (setup.py): started 2023-11-23T18:22:39,268 Destination directory: /tmp/pip-wheel-b01vr6ux 2023-11-23T18:22:39,269 Running command python setup.py bdist_wheel 2023-11-23T18:22:39,710 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-23T18:22:39,710 !! 2023-11-23T18:22:39,711 ******************************************************************************** 2023-11-23T18:22:39,712 Usage of dash-separated 'description-file' will not be supported in future 2023-11-23T18:22:39,712 versions. Please use the underscore name 'description_file' instead. 2023-11-23T18:22:39,714 This deprecation is overdue, please update your project and remove deprecated 2023-11-23T18:22:39,714 calls to avoid build errors in the future. 2023-11-23T18:22:39,715 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-23T18:22:39,716 ******************************************************************************** 2023-11-23T18:22:39,717 !! 2023-11-23T18:22:39,718 opt = self.warn_dash_deprecation(opt, section) 2023-11-23T18:22:40,230 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-23T18:22:40,231 !! 2023-11-23T18:22:40,232 ******************************************************************************** 2023-11-23T18:22:40,232 Usage of dash-separated 'description-file' will not be supported in future 2023-11-23T18:22:40,233 versions. Please use the underscore name 'description_file' instead. 2023-11-23T18:22:40,234 This deprecation is overdue, please update your project and remove deprecated 2023-11-23T18:22:40,235 calls to avoid build errors in the future. 2023-11-23T18:22:40,236 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-23T18:22:40,237 ******************************************************************************** 2023-11-23T18:22:40,238 !! 2023-11-23T18:22:40,238 opt = self.warn_dash_deprecation(opt, section) 2023-11-23T18:22:40,264 running bdist_wheel 2023-11-23T18:22:40,360 running build 2023-11-23T18:22:40,361 running build_py 2023-11-23T18:22:40,388 creating build 2023-11-23T18:22:40,389 creating build/lib 2023-11-23T18:22:40,390 creating build/lib/tfbs_footprinter3 2023-11-23T18:22:40,391 copying tfbs_footprinter3/tfbs_footprinter3.py -> build/lib/tfbs_footprinter3 2023-11-23T18:22:40,396 copying tfbs_footprinter3/tfbs_footprinter3.2022_07_05.py -> build/lib/tfbs_footprinter3 2023-11-23T18:22:40,402 copying tfbs_footprinter3/tfbs_footprinter3.2022_11_30.py -> build/lib/tfbs_footprinter3 2023-11-23T18:22:40,407 copying tfbs_footprinter3/tfbs_footprinter3.test.py -> build/lib/tfbs_footprinter3 2023-11-23T18:22:40,412 copying tfbs_footprinter3/tfbs_footprinter3.2023-11-14.py -> build/lib/tfbs_footprinter3 2023-11-23T18:22:40,443 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-11-23T18:22:40,444 !! 2023-11-23T18:22:40,445 ******************************************************************************** 2023-11-23T18:22:40,445 Please avoid running ``setup.py`` directly. 2023-11-23T18:22:40,446 Instead, use pypa/build, pypa/installer or other 2023-11-23T18:22:40,446 standards-based tools. 2023-11-23T18:22:40,447 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-11-23T18:22:40,448 ******************************************************************************** 2023-11-23T18:22:40,449 !! 2023-11-23T18:22:40,450 self.initialize_options() 2023-11-23T18:22:40,469 installing to build/bdist.linux-armv7l/wheel 2023-11-23T18:22:40,469 running install 2023-11-23T18:22:40,493 running install_lib 2023-11-23T18:22:40,518 creating build/bdist.linux-armv7l 2023-11-23T18:22:40,519 creating build/bdist.linux-armv7l/wheel 2023-11-23T18:22:40,520 creating build/bdist.linux-armv7l/wheel/tfbs_footprinter3 2023-11-23T18:22:40,521 copying build/lib/tfbs_footprinter3/tfbs_footprinter3.py -> build/bdist.linux-armv7l/wheel/tfbs_footprinter3 2023-11-23T18:22:40,527 copying build/lib/tfbs_footprinter3/tfbs_footprinter3.2022_07_05.py -> build/bdist.linux-armv7l/wheel/tfbs_footprinter3 2023-11-23T18:22:40,533 copying build/lib/tfbs_footprinter3/tfbs_footprinter3.2022_11_30.py -> build/bdist.linux-armv7l/wheel/tfbs_footprinter3 2023-11-23T18:22:40,538 copying build/lib/tfbs_footprinter3/tfbs_footprinter3.test.py -> build/bdist.linux-armv7l/wheel/tfbs_footprinter3 2023-11-23T18:22:40,543 copying build/lib/tfbs_footprinter3/tfbs_footprinter3.2023-11-14.py -> build/bdist.linux-armv7l/wheel/tfbs_footprinter3 2023-11-23T18:22:40,548 running install_egg_info 2023-11-23T18:22:40,608 running egg_info 2023-11-23T18:22:40,632 writing TFBS_footprinting3.egg-info/PKG-INFO 2023-11-23T18:22:40,637 writing dependency_links to TFBS_footprinting3.egg-info/dependency_links.txt 2023-11-23T18:22:40,638 writing entry points to TFBS_footprinting3.egg-info/entry_points.txt 2023-11-23T18:22:40,639 writing requirements to TFBS_footprinting3.egg-info/requires.txt 2023-11-23T18:22:40,641 writing top-level names to TFBS_footprinting3.egg-info/top_level.txt 2023-11-23T18:22:40,666 reading manifest file 'TFBS_footprinting3.egg-info/SOURCES.txt' 2023-11-23T18:22:40,669 reading manifest template 'MANIFEST.in' 2023-11-23T18:22:40,670 warning: no files found matching 'sample_analysis/*' 2023-11-23T18:22:40,670 adding license file 'LICENSE' 2023-11-23T18:22:40,672 writing manifest file 'TFBS_footprinting3.egg-info/SOURCES.txt' 2023-11-23T18:22:40,674 Copying TFBS_footprinting3.egg-info to build/bdist.linux-armv7l/wheel/TFBS_footprinting3-0.0.5-py3.11.egg-info 2023-11-23T18:22:40,686 running install_scripts 2023-11-23T18:22:40,703 creating build/bdist.linux-armv7l/wheel/TFBS_footprinting3-0.0.5.dist-info/WHEEL 2023-11-23T18:22:40,705 creating '/tmp/pip-wheel-b01vr6ux/TFBS_footprinting3-0.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-23T18:22:40,721 adding 'tfbs_footprinter3/tfbs_footprinter3.2022_07_05.py' 2023-11-23T18:22:40,736 adding 'tfbs_footprinter3/tfbs_footprinter3.2022_11_30.py' 2023-11-23T18:22:40,751 adding 'tfbs_footprinter3/tfbs_footprinter3.2023-11-14.py' 2023-11-23T18:22:40,766 adding 'tfbs_footprinter3/tfbs_footprinter3.py' 2023-11-23T18:22:40,781 adding 'tfbs_footprinter3/tfbs_footprinter3.test.py' 2023-11-23T18:22:40,783 adding 'TFBS_footprinting3-0.0.5.dist-info/LICENSE' 2023-11-23T18:22:40,786 adding 'TFBS_footprinting3-0.0.5.dist-info/METADATA' 2023-11-23T18:22:40,788 adding 'TFBS_footprinting3-0.0.5.dist-info/WHEEL' 2023-11-23T18:22:40,789 adding 'TFBS_footprinting3-0.0.5.dist-info/entry_points.txt' 2023-11-23T18:22:40,790 adding 'TFBS_footprinting3-0.0.5.dist-info/top_level.txt' 2023-11-23T18:22:40,790 adding 'TFBS_footprinting3-0.0.5.dist-info/RECORD' 2023-11-23T18:22:40,794 removing build/bdist.linux-armv7l/wheel 2023-11-23T18:22:40,910 Building wheel for tfbs-footprinting3 (setup.py): finished with status 'done' 2023-11-23T18:22:40,914 Created wheel for tfbs-footprinting3: filename=TFBS_footprinting3-0.0.5-py3-none-any.whl size=147449 sha256=c2ac7ba7014564444c3576ef644ed33154dd8d5a503278fa88762de35b4e4757 2023-11-23T18:22:40,915 Stored in directory: /tmp/pip-ephem-wheel-cache-ousio45a/wheels/53/3f/29/d6ad1fa378276014c2772dc85f78f6181cea7df7ecc5dec3ca 2023-11-23T18:22:40,928 Successfully built tfbs-footprinting3 2023-11-23T18:22:40,938 Removed build tracker: '/tmp/pip-build-tracker-oxiiqy0y'