2023-11-23T20:42:06,287 Created temporary directory: /tmp/pip-build-tracker-_rvxe5tx 2023-11-23T20:42:06,288 Initialized build tracking at /tmp/pip-build-tracker-_rvxe5tx 2023-11-23T20:42:06,289 Created build tracker: /tmp/pip-build-tracker-_rvxe5tx 2023-11-23T20:42:06,289 Entered build tracker: /tmp/pip-build-tracker-_rvxe5tx 2023-11-23T20:42:06,290 Created temporary directory: /tmp/pip-wheel-zscxr553 2023-11-23T20:42:06,294 Created temporary directory: /tmp/pip-ephem-wheel-cache-ql7j7fj6 2023-11-23T20:42:06,315 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-23T20:42:06,319 2 location(s) to search for versions of witch-msa: 2023-11-23T20:42:06,319 * https://pypi.org/simple/witch-msa/ 2023-11-23T20:42:06,319 * https://www.piwheels.org/simple/witch-msa/ 2023-11-23T20:42:06,320 Fetching project page and analyzing links: https://pypi.org/simple/witch-msa/ 2023-11-23T20:42:06,321 Getting page https://pypi.org/simple/witch-msa/ 2023-11-23T20:42:06,322 Found index url https://pypi.org/simple/ 2023-11-23T20:42:06,463 Fetched page https://pypi.org/simple/witch-msa/ as application/vnd.pypi.simple.v1+json 2023-11-23T20:42:06,466 Found link https://files.pythonhosted.org/packages/9f/57/80dd0c29162c6b84cd017182095b5cb2aa4dc11260bbae056f3ef0351943/witch-msa-1.0.0rc1.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.0rc1 2023-11-23T20:42:06,467 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/43/78/272d4d835763bc77476391081248647987723a7b0226719cd93618a44b8a/witch_msa-1.0.0rc1-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2023-11-23T20:42:06,468 Found link https://files.pythonhosted.org/packages/04/42/abe66ef86387d93b5b0bc9f23ec71b3660310d62820b56cb6315b13db266/witch-msa-1.0.0rc3.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.0rc3 2023-11-23T20:42:06,469 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/d5/e8/f939cdd95425dcd48632cc7a2fdaa939beabfed6d2004dff600c8afc0be1/witch_msa-1.0.0rc3-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2023-11-23T20:42:06,470 Found link https://files.pythonhosted.org/packages/18/10/e568ef8fa1a5a231130cc83c420b1bed9bf69ceaf17911f5b45f67496b39/witch-msa-1.0.0rc4.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.0rc4 2023-11-23T20:42:06,470 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/de/20/c1d8c0f03fe35ea092495a73a29d3bca6a94ea55ea917d04b73cc7582215/witch_msa-1.0.0rc4-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2023-11-23T20:42:06,471 Found link https://files.pythonhosted.org/packages/19/e6/150568e28ab0565dd78080eba70d4d2254038ef55327b82919e5915c6101/witch-msa-1.0.1.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.1 2023-11-23T20:42:06,472 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/6a/bf/e791b97aa9ff2e5592b40328ac11461a5dae4ecd40e175d1349be75cf37a/witch_msa-1.0.1-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2023-11-23T20:42:06,473 Fetching project page and analyzing links: https://www.piwheels.org/simple/witch-msa/ 2023-11-23T20:42:06,473 Getting page https://www.piwheels.org/simple/witch-msa/ 2023-11-23T20:42:06,475 Found index url https://www.piwheels.org/simple/ 2023-11-23T20:42:06,640 Fetched page https://www.piwheels.org/simple/witch-msa/ as text/html 2023-11-23T20:42:06,642 Skipping link: No binaries permitted for witch-msa: https://www.piwheels.org/simple/witch-msa/witch_msa-1.0.0rc1-py3-none-any.whl#sha256=7639b8df3d4a6b6fc2a4e2654e2da8d9636881239740deb58f44b604e93074d6 (from https://www.piwheels.org/simple/witch-msa/) (requires-python:>=3.7) 2023-11-23T20:42:06,643 Skipping link: not a file: https://www.piwheels.org/simple/witch-msa/ 2023-11-23T20:42:06,643 Skipping link: not a file: https://pypi.org/simple/witch-msa/ 2023-11-23T20:42:06,664 Given no hashes to check 1 links for project 'witch-msa': discarding no candidates 2023-11-23T20:42:06,683 Collecting witch-msa==1.0.0rc3 2023-11-23T20:42:06,686 Created temporary directory: /tmp/pip-unpack-tve7hep9 2023-11-23T20:42:07,500 Downloading witch-msa-1.0.0rc3.tar.gz (32.5 MB) 2023-11-23T20:42:20,349 Added witch-msa==1.0.0rc3 from https://files.pythonhosted.org/packages/04/42/abe66ef86387d93b5b0bc9f23ec71b3660310d62820b56cb6315b13db266/witch-msa-1.0.0rc3.tar.gz to build tracker '/tmp/pip-build-tracker-_rvxe5tx' 2023-11-23T20:42:20,353 Created temporary directory: /tmp/pip-build-env-2zpwjnk0 2023-11-23T20:42:20,357 Installing build dependencies: started 2023-11-23T20:42:20,358 Running command pip subprocess to install build dependencies 2023-11-23T20:42:21,568 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-11-23T20:42:22,089 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-23T20:42:23,648 Collecting setuptools 2023-11-23T20:42:23,649 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/e1/ed2dd0850446b8697ad28d118df885ad04140c64ace06c4bd559f7c8a94f/setuptools-69.0.2-py3-none-any.whl.metadata 2023-11-23T20:42:23,655 Using cached setuptools-69.0.2-py3-none-any.whl.metadata (6.3 kB) 2023-11-23T20:42:23,826 Using cached setuptools-69.0.2-py3-none-any.whl (819 kB) 2023-11-23T20:42:26,293 Installing collected packages: setuptools 2023-11-23T20:42:28,557 Successfully installed setuptools-69.0.2 2023-11-23T20:42:28,826 [notice] A new release of pip is available: 23.2.1 -> 23.3.1 2023-11-23T20:42:28,826 [notice] To update, run: python3 -m pip install --upgrade pip 2023-11-23T20:42:29,086 Installing build dependencies: finished with status 'done' 2023-11-23T20:42:29,090 Getting requirements to build wheel: started 2023-11-23T20:42:29,091 Running command Getting requirements to build wheel 2023-11-23T20:42:29,869 System is Linux-6.1.21-v7l+-armv7l-with-glibc2.36, using default config as main.config... 2023-11-23T20:42:29,870 Detecting existing software from the user's environment... 2023-11-23T20:42:29,871 mafft: None 2023-11-23T20:42:29,871 mcl: None 2023-11-23T20:42:29,872 hmmsearch: None 2023-11-23T20:42:29,873 hmmalign: None 2023-11-23T20:42:29,873 hmmbuild: None 2023-11-23T20:42:29,874 FastTreeMP: None 2023-11-23T20:42:29,876 (Done) main.config written to /tmp/pip-wheel-zscxr553/witch-msa_5f5dbe7007be4da59290a46079718558/main.config 2023-11-23T20:42:29,877 If you would like to make manual changes, please directly edit /tmp/pip-wheel-zscxr553/witch-msa_5f5dbe7007be4da59290a46079718558/main.config 2023-11-23T20:42:29,877 running egg_info 2023-11-23T20:42:29,878 writing witch_msa.egg-info/PKG-INFO 2023-11-23T20:42:29,878 writing dependency_links to witch_msa.egg-info/dependency_links.txt 2023-11-23T20:42:29,880 writing requirements to witch_msa.egg-info/requires.txt 2023-11-23T20:42:29,881 writing top-level names to witch_msa.egg-info/top_level.txt 2023-11-23T20:42:29,899 reading manifest file 'witch_msa.egg-info/SOURCES.txt' 2023-11-23T20:42:29,918 reading manifest template 'MANIFEST.in' 2023-11-23T20:42:29,936 no previously-included directories found matching 'examples/scenario*_output*' 2023-11-23T20:42:29,937 no previously-included directories found matching 'examples/data2' 2023-11-23T20:42:29,938 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-11-23T20:42:29,938 adding license file 'LICENSE' 2023-11-23T20:42:29,946 writing manifest file 'witch_msa.egg-info/SOURCES.txt' 2023-11-23T20:42:30,057 Getting requirements to build wheel: finished with status 'done' 2023-11-23T20:42:30,065 Installing backend dependencies: started 2023-11-23T20:42:30,067 Running command pip subprocess to install backend dependencies 2023-11-23T20:42:31,201 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-11-23T20:42:31,706 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-23T20:42:32,218 Collecting wheel 2023-11-23T20:42:32,236 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.3-py3-none-any.whl (65 kB) 2023-11-23T20:42:34,455 Installing collected packages: wheel 2023-11-23T20:42:34,679 Creating /tmp/pip-build-env-2zpwjnk0/normal/local/bin 2023-11-23T20:42:34,681 changing mode of /tmp/pip-build-env-2zpwjnk0/normal/local/bin/wheel to 755 2023-11-23T20:42:34,692 Successfully installed wheel-0.41.3 2023-11-23T20:42:34,961 [notice] A new release of pip is available: 23.2.1 -> 23.3.1 2023-11-23T20:42:34,962 [notice] To update, run: python3 -m pip install --upgrade pip 2023-11-23T20:42:35,187 Installing backend dependencies: finished with status 'done' 2023-11-23T20:42:35,189 Created temporary directory: /tmp/pip-modern-metadata-9d6k_43b 2023-11-23T20:42:35,192 Preparing metadata (pyproject.toml): started 2023-11-23T20:42:35,193 Running command Preparing metadata (pyproject.toml) 2023-11-23T20:42:36,002 Main configuration file /tmp/pip-wheel-zscxr553/witch-msa_5f5dbe7007be4da59290a46079718558/main.config exists... 2023-11-23T20:42:36,002 Overwriting existing configuration file... 2023-11-23T20:42:36,004 System is Linux-6.1.21-v7l+-armv7l-with-glibc2.36, using default config as main.config... 2023-11-23T20:42:36,005 Detecting existing software from the user's environment... 2023-11-23T20:42:36,005 mafft: None 2023-11-23T20:42:36,006 mcl: None 2023-11-23T20:42:36,006 hmmsearch: None 2023-11-23T20:42:36,007 hmmalign: None 2023-11-23T20:42:36,007 hmmbuild: None 2023-11-23T20:42:36,008 FastTreeMP: None 2023-11-23T20:42:36,009 (Done) main.config written to /tmp/pip-wheel-zscxr553/witch-msa_5f5dbe7007be4da59290a46079718558/main.config 2023-11-23T20:42:36,010 If you would like to make manual changes, please directly edit /tmp/pip-wheel-zscxr553/witch-msa_5f5dbe7007be4da59290a46079718558/main.config 2023-11-23T20:42:36,010 running dist_info 2023-11-23T20:42:36,011 creating /tmp/pip-modern-metadata-9d6k_43b/witch_msa.egg-info 2023-11-23T20:42:36,012 writing /tmp/pip-modern-metadata-9d6k_43b/witch_msa.egg-info/PKG-INFO 2023-11-23T20:42:36,017 writing dependency_links to /tmp/pip-modern-metadata-9d6k_43b/witch_msa.egg-info/dependency_links.txt 2023-11-23T20:42:36,019 writing requirements to /tmp/pip-modern-metadata-9d6k_43b/witch_msa.egg-info/requires.txt 2023-11-23T20:42:36,021 writing top-level names to /tmp/pip-modern-metadata-9d6k_43b/witch_msa.egg-info/top_level.txt 2023-11-23T20:42:36,022 writing manifest file '/tmp/pip-modern-metadata-9d6k_43b/witch_msa.egg-info/SOURCES.txt' 2023-11-23T20:42:36,043 reading manifest file '/tmp/pip-modern-metadata-9d6k_43b/witch_msa.egg-info/SOURCES.txt' 2023-11-23T20:42:36,045 reading manifest template 'MANIFEST.in' 2023-11-23T20:42:36,080 no previously-included directories found matching 'examples/scenario*_output*' 2023-11-23T20:42:36,080 no previously-included directories found matching 'examples/data2' 2023-11-23T20:42:36,081 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-11-23T20:42:36,082 adding license file 'LICENSE' 2023-11-23T20:42:36,088 writing manifest file '/tmp/pip-modern-metadata-9d6k_43b/witch_msa.egg-info/SOURCES.txt' 2023-11-23T20:42:36,089 creating '/tmp/pip-modern-metadata-9d6k_43b/witch_msa-1.0.0rc3.dist-info' 2023-11-23T20:42:36,249 Preparing metadata (pyproject.toml): finished with status 'done' 2023-11-23T20:42:36,262 Source in /tmp/pip-wheel-zscxr553/witch-msa_5f5dbe7007be4da59290a46079718558 has version 1.0.0rc3, which satisfies requirement witch-msa==1.0.0rc3 from https://files.pythonhosted.org/packages/04/42/abe66ef86387d93b5b0bc9f23ec71b3660310d62820b56cb6315b13db266/witch-msa-1.0.0rc3.tar.gz 2023-11-23T20:42:36,263 Removed witch-msa==1.0.0rc3 from https://files.pythonhosted.org/packages/04/42/abe66ef86387d93b5b0bc9f23ec71b3660310d62820b56cb6315b13db266/witch-msa-1.0.0rc3.tar.gz from build tracker '/tmp/pip-build-tracker-_rvxe5tx' 2023-11-23T20:42:36,283 Created temporary directory: /tmp/pip-unpack-aw1rcum4 2023-11-23T20:42:36,285 Created temporary directory: /tmp/pip-unpack-gxp1i6lm 2023-11-23T20:42:36,309 Building wheels for collected packages: witch-msa 2023-11-23T20:42:36,313 Created temporary directory: /tmp/pip-wheel-4mo5kpfr 2023-11-23T20:42:36,314 Destination directory: /tmp/pip-wheel-4mo5kpfr 2023-11-23T20:42:36,316 Building wheel for witch-msa (pyproject.toml): started 2023-11-23T20:42:36,317 Running command Building wheel for witch-msa (pyproject.toml) 2023-11-23T20:42:37,073 Main configuration file /tmp/pip-wheel-zscxr553/witch-msa_5f5dbe7007be4da59290a46079718558/main.config exists... 2023-11-23T20:42:37,073 Overwriting existing configuration file... 2023-11-23T20:42:37,075 System is Linux-6.1.21-v7l+-armv7l-with-glibc2.36, using default config as main.config... 2023-11-23T20:42:37,075 Detecting existing software from the user's environment... 2023-11-23T20:42:37,076 mafft: None 2023-11-23T20:42:37,076 mcl: None 2023-11-23T20:42:37,077 hmmsearch: None 2023-11-23T20:42:37,077 hmmalign: None 2023-11-23T20:42:37,078 hmmbuild: None 2023-11-23T20:42:37,078 FastTreeMP: None 2023-11-23T20:42:37,079 (Done) main.config written to /tmp/pip-wheel-zscxr553/witch-msa_5f5dbe7007be4da59290a46079718558/main.config 2023-11-23T20:42:37,080 If you would like to make manual changes, please directly edit /tmp/pip-wheel-zscxr553/witch-msa_5f5dbe7007be4da59290a46079718558/main.config 2023-11-23T20:42:37,080 running bdist_wheel 2023-11-23T20:42:37,090 running build 2023-11-23T20:42:37,090 running build_py 2023-11-23T20:42:37,095 creating build 2023-11-23T20:42:37,095 creating build/lib 2023-11-23T20:42:37,096 creating build/lib/gcmm 2023-11-23T20:42:37,097 copying gcmm/__init__.py -> build/lib/gcmm 2023-11-23T20:42:37,099 copying gcmm/backbone.py -> build/lib/gcmm 2023-11-23T20:42:37,101 copying gcmm/tree.py -> build/lib/gcmm 2023-11-23T20:42:37,104 copying gcmm/callback.py -> build/lib/gcmm 2023-11-23T20:42:37,106 copying gcmm/results_handler.py -> build/lib/gcmm 2023-11-23T20:42:37,108 copying gcmm/loader.py -> build/lib/gcmm 2023-11-23T20:42:37,110 copying gcmm/aligner.py -> build/lib/gcmm 2023-11-23T20:42:37,112 copying gcmm/merger.py -> build/lib/gcmm 2023-11-23T20:42:37,114 copying gcmm/decompose_tree.py -> build/lib/gcmm 2023-11-23T20:42:37,116 copying gcmm/gcmm.py -> build/lib/gcmm 2023-11-23T20:42:37,118 copying gcmm/configs.py -> build/lib/gcmm 2023-11-23T20:42:37,120 copying gcmm/algorithm.py -> build/lib/gcmm 2023-11-23T20:42:37,123 copying gcmm/task.py -> build/lib/gcmm 2023-11-23T20:42:37,125 copying gcmm/weighting.py -> build/lib/gcmm 2023-11-23T20:42:37,127 creating build/lib/helpers 2023-11-23T20:42:37,128 copying helpers/__init__.py -> build/lib/helpers 2023-11-23T20:42:37,129 copying helpers/general_tools.py -> build/lib/helpers 2023-11-23T20:42:37,131 copying helpers/pyhmmer_tools.py -> build/lib/helpers 2023-11-23T20:42:37,133 copying helpers/alignment_tools.py -> build/lib/helpers 2023-11-23T20:42:37,136 copying helpers/math_utils.py -> build/lib/helpers 2023-11-23T20:42:37,138 creating build/lib/tests 2023-11-23T20:42:37,139 copying tests/__init__.py -> build/lib/tests 2023-11-23T20:42:37,141 copying tests/test_pipeline.py -> build/lib/tests 2023-11-23T20:42:37,142 running egg_info 2023-11-23T20:42:37,145 writing witch_msa.egg-info/PKG-INFO 2023-11-23T20:42:37,150 writing dependency_links to witch_msa.egg-info/dependency_links.txt 2023-11-23T20:42:37,151 writing requirements to witch_msa.egg-info/requires.txt 2023-11-23T20:42:37,152 writing top-level names to witch_msa.egg-info/top_level.txt 2023-11-23T20:42:37,162 reading manifest file 'witch_msa.egg-info/SOURCES.txt' 2023-11-23T20:42:37,167 reading manifest template 'MANIFEST.in' 2023-11-23T20:42:37,179 no previously-included directories found matching 'examples/scenario*_output*' 2023-11-23T20:42:37,180 no previously-included directories found matching 'examples/data2' 2023-11-23T20:42:37,181 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2023-11-23T20:42:37,181 adding license file 'LICENSE' 2023-11-23T20:42:37,189 writing manifest file 'witch_msa.egg-info/SOURCES.txt' 2023-11-23T20:42:37,198 running build_scripts 2023-11-23T20:42:37,199 creating build/scripts-3.11 2023-11-23T20:42:37,199 copying and adjusting witch.py -> build/scripts-3.11 2023-11-23T20:42:37,202 changing mode of build/scripts-3.11/witch.py from 644 to 755 2023-11-23T20:42:37,208 installing to build/bdist.linux-armv7l/wheel 2023-11-23T20:42:37,209 running install 2023-11-23T20:42:37,233 running install_lib 2023-11-23T20:42:37,237 creating build/bdist.linux-armv7l 2023-11-23T20:42:37,238 creating build/bdist.linux-armv7l/wheel 2023-11-23T20:42:37,239 creating build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,240 copying build/lib/gcmm/__init__.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,242 copying build/lib/gcmm/backbone.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,244 copying build/lib/gcmm/tree.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,247 copying build/lib/gcmm/callback.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,249 copying build/lib/gcmm/results_handler.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,251 copying build/lib/gcmm/loader.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,253 copying build/lib/gcmm/aligner.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,256 copying build/lib/gcmm/merger.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,258 copying build/lib/gcmm/decompose_tree.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,260 copying build/lib/gcmm/gcmm.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,262 copying build/lib/gcmm/configs.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,265 copying build/lib/gcmm/algorithm.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,267 copying build/lib/gcmm/task.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,269 copying build/lib/gcmm/weighting.py -> build/bdist.linux-armv7l/wheel/gcmm 2023-11-23T20:42:37,272 creating build/bdist.linux-armv7l/wheel/helpers 2023-11-23T20:42:37,273 copying build/lib/helpers/__init__.py -> build/bdist.linux-armv7l/wheel/helpers 2023-11-23T20:42:37,275 copying build/lib/helpers/general_tools.py -> build/bdist.linux-armv7l/wheel/helpers 2023-11-23T20:42:37,276 copying build/lib/helpers/pyhmmer_tools.py -> build/bdist.linux-armv7l/wheel/helpers 2023-11-23T20:42:37,278 copying build/lib/helpers/alignment_tools.py -> build/bdist.linux-armv7l/wheel/helpers 2023-11-23T20:42:37,281 copying build/lib/helpers/math_utils.py -> build/bdist.linux-armv7l/wheel/helpers 2023-11-23T20:42:37,284 creating build/bdist.linux-armv7l/wheel/tests 2023-11-23T20:42:37,285 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2023-11-23T20:42:37,286 copying build/lib/tests/test_pipeline.py -> build/bdist.linux-armv7l/wheel/tests 2023-11-23T20:42:37,288 running install_egg_info 2023-11-23T20:42:37,291 Copying witch_msa.egg-info to build/bdist.linux-armv7l/wheel/witch_msa-1.0.0rc3-py3.11.egg-info 2023-11-23T20:42:37,303 running install_scripts 2023-11-23T20:42:37,304 creating build/bdist.linux-armv7l/wheel/witch_msa-1.0.0rc3.data 2023-11-23T20:42:37,304 creating build/bdist.linux-armv7l/wheel/witch_msa-1.0.0rc3.data/scripts 2023-11-23T20:42:37,305 copying build/scripts-3.11/witch.py -> build/bdist.linux-armv7l/wheel/witch_msa-1.0.0rc3.data/scripts 2023-11-23T20:42:37,308 changing mode of build/bdist.linux-armv7l/wheel/witch_msa-1.0.0rc3.data/scripts/witch.py to 755 2023-11-23T20:42:37,328 creating build/bdist.linux-armv7l/wheel/witch_msa-1.0.0rc3.dist-info/WHEEL 2023-11-23T20:42:37,331 creating '/tmp/pip-wheel-4mo5kpfr/.tmp-9_pxo9ou/witch_msa-1.0.0rc3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-23T20:42:37,334 adding 'gcmm/__init__.py' 2023-11-23T20:42:37,337 adding 'gcmm/algorithm.py' 2023-11-23T20:42:37,340 adding 'gcmm/aligner.py' 2023-11-23T20:42:37,343 adding 'gcmm/backbone.py' 2023-11-23T20:42:37,344 adding 'gcmm/callback.py' 2023-11-23T20:42:37,346 adding 'gcmm/configs.py' 2023-11-23T20:42:37,348 adding 'gcmm/decompose_tree.py' 2023-11-23T20:42:37,350 adding 'gcmm/gcmm.py' 2023-11-23T20:42:37,352 adding 'gcmm/loader.py' 2023-11-23T20:42:37,354 adding 'gcmm/merger.py' 2023-11-23T20:42:37,356 adding 'gcmm/results_handler.py' 2023-11-23T20:42:37,359 adding 'gcmm/task.py' 2023-11-23T20:42:37,363 adding 'gcmm/tree.py' 2023-11-23T20:42:37,367 adding 'gcmm/weighting.py' 2023-11-23T20:42:37,373 adding 'helpers/__init__.py' 2023-11-23T20:42:37,379 adding 'helpers/alignment_tools.py' 2023-11-23T20:42:37,381 adding 'helpers/general_tools.py' 2023-11-23T20:42:37,382 adding 'helpers/math_utils.py' 2023-11-23T20:42:37,383 adding 'helpers/pyhmmer_tools.py' 2023-11-23T20:42:37,385 adding 'tests/__init__.py' 2023-11-23T20:42:37,386 adding 'tests/test_pipeline.py' 2023-11-23T20:42:37,389 adding 'witch_msa-1.0.0rc3.data/scripts/witch.py' 2023-11-23T20:42:37,396 adding 'witch_msa-1.0.0rc3.dist-info/LICENSE' 2023-11-23T20:42:37,404 adding 'witch_msa-1.0.0rc3.dist-info/METADATA' 2023-11-23T20:42:37,406 adding 'witch_msa-1.0.0rc3.dist-info/WHEEL' 2023-11-23T20:42:37,406 adding 'witch_msa-1.0.0rc3.dist-info/top_level.txt' 2023-11-23T20:42:37,408 adding 'witch_msa-1.0.0rc3.dist-info/RECORD' 2023-11-23T20:42:37,410 removing build/bdist.linux-armv7l/wheel 2023-11-23T20:42:37,537 Building wheel for witch-msa (pyproject.toml): finished with status 'done' 2023-11-23T20:42:37,544 Created wheel for witch-msa: filename=witch_msa-1.0.0rc3-py3-none-any.whl size=90002 sha256=c99577c2a6e9a75c03f497d93f5f54ee9a04036357ca0b4cfb53f08df1f8023f 2023-11-23T20:42:37,545 Stored in directory: /tmp/pip-ephem-wheel-cache-ql7j7fj6/wheels/39/c2/e5/f61af91b34358b054ed2413d152138eeb9762d445f4c106de7 2023-11-23T20:42:37,579 Successfully built witch-msa 2023-11-23T20:42:37,585 Removed build tracker: '/tmp/pip-build-tracker-_rvxe5tx'