2023-11-24T01:58:15,329 Created temporary directory: /tmp/pip-build-tracker-q37v0fm5 2023-11-24T01:58:15,333 Initialized build tracking at /tmp/pip-build-tracker-q37v0fm5 2023-11-24T01:58:15,334 Created build tracker: /tmp/pip-build-tracker-q37v0fm5 2023-11-24T01:58:15,334 Entered build tracker: /tmp/pip-build-tracker-q37v0fm5 2023-11-24T01:58:15,335 Created temporary directory: /tmp/pip-wheel-wx9mb5op 2023-11-24T01:58:15,346 Created temporary directory: /tmp/pip-ephem-wheel-cache-gdk2593l 2023-11-24T01:58:15,401 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-24T01:58:15,415 2 location(s) to search for versions of spagrn: 2023-11-24T01:58:15,415 * https://pypi.org/simple/spagrn/ 2023-11-24T01:58:15,415 * https://www.piwheels.org/simple/spagrn/ 2023-11-24T01:58:15,416 Fetching project page and analyzing links: https://pypi.org/simple/spagrn/ 2023-11-24T01:58:15,417 Getting page https://pypi.org/simple/spagrn/ 2023-11-24T01:58:15,421 Found index url https://pypi.org/simple/ 2023-11-24T01:58:15,645 Fetched page https://pypi.org/simple/spagrn/ as application/vnd.pypi.simple.v1+json 2023-11-24T01:58:15,651 Found link https://files.pythonhosted.org/packages/dd/c6/fc9d5b53005776a8b94e7a54d3a1f519aff4062171b543074e2ff2b627e2/spagrn-1.0.0.tar.gz (from https://pypi.org/simple/spagrn/), version: 1.0.0 2023-11-24T01:58:15,652 Found link https://files.pythonhosted.org/packages/c6/e5/ac11c77421e43de22d6623b744df151e776128167245ada24466cd7cfefd/spagrn-1.0.1.tar.gz (from https://pypi.org/simple/spagrn/), version: 1.0.1 2023-11-24T01:58:15,654 Found link https://files.pythonhosted.org/packages/0a/b1/2275b7a04370548001a28d8f9388e9b52c00edec0cb85cc063f1c46c7896/spagrn-1.0.2.tar.gz (from https://pypi.org/simple/spagrn/) (requires-python:>=3.7,<3.11), version: 1.0.2 2023-11-24T01:58:15,655 Found link https://files.pythonhosted.org/packages/e0/6e/d05db261dcb2586691f2b3124e7aa0be9f5c6ab50b7ae0653ef70c6bd880/spagrn-1.0.3.tar.gz (from https://pypi.org/simple/spagrn/) (requires-python:>=3.7,<3.11), version: 1.0.3 2023-11-24T01:58:15,657 Found link https://files.pythonhosted.org/packages/82/15/3a0879485176792359622ab67f3916ca45c5c487b33d028d703e0f28cb4e/spagrn-1.0.4.tar.gz (from https://pypi.org/simple/spagrn/) (requires-python:>=3.7,<3.11), version: 1.0.4 2023-11-24T01:58:15,659 Found link https://files.pythonhosted.org/packages/52/80/cbd30481631a09cafacb50f97f243b342e65a3718d7c5801c3db29361684/spagrn-1.0.5.tar.gz (from https://pypi.org/simple/spagrn/) (requires-python:>=3.7,<3.11), version: 1.0.5 2023-11-24T01:58:15,660 Found link https://files.pythonhosted.org/packages/9d/eb/efdf044e6cc97f354732882beccaff86f69b2ce40abbf0b4397ced708738/spagrn-1.0.6.tar.gz (from https://pypi.org/simple/spagrn/) (requires-python:>=3.7,<3.11), version: 1.0.6 2023-11-24T01:58:15,662 Found link https://files.pythonhosted.org/packages/19/9b/ce892cbc325e2c01f5170d95dbca4d376258e7f5e9b274eee2be70ffd973/spagrn-1.0.7.tar.gz (from https://pypi.org/simple/spagrn/) (requires-python:>=3.7,<3.11), version: 1.0.7 2023-11-24T01:58:15,663 Fetching project page and analyzing links: https://www.piwheels.org/simple/spagrn/ 2023-11-24T01:58:15,664 Getting page https://www.piwheels.org/simple/spagrn/ 2023-11-24T01:58:15,666 Found index url https://www.piwheels.org/simple/ 2023-11-24T01:58:15,781 Fetched page https://www.piwheels.org/simple/spagrn/ as text/html 2023-11-24T01:58:15,788 Skipping link: No binaries permitted for spagrn: https://www.piwheels.org/simple/spagrn/spagrn-1.0.5-py3-none-any.whl#sha256=8c8197b269e3f2f5ebdfdb29b1de76c022e3f722ac4577be7a129722e2215ab6 (from https://www.piwheels.org/simple/spagrn/) (requires-python:>=3.7,<3.11) 2023-11-24T01:58:15,788 Skipping link: No binaries permitted for spagrn: https://www.piwheels.org/simple/spagrn/spagrn-1.0.4-py3-none-any.whl#sha256=5bc83992943471af78ca8859ccb43cc593fa6368bb854d9c9caae22805870d47 (from https://www.piwheels.org/simple/spagrn/) (requires-python:>=3.7,<3.11) 2023-11-24T01:58:15,789 Skipping link: No binaries permitted for spagrn: https://www.piwheels.org/simple/spagrn/spagrn-1.0.3-py3-none-any.whl#sha256=f397990eb38f5106fe2a07e79e233e0fd430b143e86edd144ad20eea2370622e (from https://www.piwheels.org/simple/spagrn/) (requires-python:>=3.7,<3.11) 2023-11-24T01:58:15,789 Skipping link: No binaries permitted for spagrn: https://www.piwheels.org/simple/spagrn/spagrn-1.0.1-py3-none-any.whl#sha256=e484f930f8395720d3715359e23419c44aa51487230d2ce1322458da07e878d3 (from https://www.piwheels.org/simple/spagrn/) 2023-11-24T01:58:15,790 Skipping link: No binaries permitted for spagrn: https://www.piwheels.org/simple/spagrn/spagrn-1.0.0-py3-none-any.whl#sha256=bea054f3023283d207c39b9239f1895c67bd72c2b8892641ba9016d9cdad5546 (from https://www.piwheels.org/simple/spagrn/) 2023-11-24T01:58:15,790 Skipping link: not a file: https://www.piwheels.org/simple/spagrn/ 2023-11-24T01:58:15,791 Skipping link: not a file: https://pypi.org/simple/spagrn/ 2023-11-24T01:58:15,826 Given no hashes to check 1 links for project 'spagrn': discarding no candidates 2023-11-24T01:58:15,857 Collecting spagrn==1.0.6 2023-11-24T01:58:15,862 Created temporary directory: /tmp/pip-unpack-ejm914qd 2023-11-24T01:58:15,957 Downloading spagrn-1.0.6.tar.gz (46 kB) 2023-11-24T01:58:16,116 Added spagrn==1.0.6 from https://files.pythonhosted.org/packages/9d/eb/efdf044e6cc97f354732882beccaff86f69b2ce40abbf0b4397ced708738/spagrn-1.0.6.tar.gz to build tracker '/tmp/pip-build-tracker-q37v0fm5' 2023-11-24T01:58:16,120 Running setup.py (path:/tmp/pip-wheel-wx9mb5op/spagrn_8416a23c7ba84ed2a8f4f84171c0adc9/setup.py) egg_info for package spagrn 2023-11-24T01:58:16,121 Created temporary directory: /tmp/pip-pip-egg-info-dhf4dttl 2023-11-24T01:58:16,122 Preparing metadata (setup.py): started 2023-11-24T01:58:16,124 Running command python setup.py egg_info 2023-11-24T01:58:18,786 running egg_info 2023-11-24T01:58:18,790 creating /tmp/pip-pip-egg-info-dhf4dttl/spagrn.egg-info 2023-11-24T01:58:18,856 writing /tmp/pip-pip-egg-info-dhf4dttl/spagrn.egg-info/PKG-INFO 2023-11-24T01:58:18,861 writing dependency_links to /tmp/pip-pip-egg-info-dhf4dttl/spagrn.egg-info/dependency_links.txt 2023-11-24T01:58:18,865 writing entry points to /tmp/pip-pip-egg-info-dhf4dttl/spagrn.egg-info/entry_points.txt 2023-11-24T01:58:18,868 writing requirements to /tmp/pip-pip-egg-info-dhf4dttl/spagrn.egg-info/requires.txt 2023-11-24T01:58:18,871 writing top-level names to /tmp/pip-pip-egg-info-dhf4dttl/spagrn.egg-info/top_level.txt 2023-11-24T01:58:18,874 writing manifest file '/tmp/pip-pip-egg-info-dhf4dttl/spagrn.egg-info/SOURCES.txt' 2023-11-24T01:58:19,080 reading manifest file '/tmp/pip-pip-egg-info-dhf4dttl/spagrn.egg-info/SOURCES.txt' 2023-11-24T01:58:19,084 adding license file 'LICENSE' 2023-11-24T01:58:19,090 writing manifest file '/tmp/pip-pip-egg-info-dhf4dttl/spagrn.egg-info/SOURCES.txt' 2023-11-24T01:58:19,093 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-24T01:58:19,093 !! 2023-11-24T01:58:19,094 ******************************************************************************** 2023-11-24T01:58:19,095 Usage of dash-separated 'description-file' will not be supported in future 2023-11-24T01:58:19,095 versions. Please use the underscore name 'description_file' instead. 2023-11-24T01:58:19,096 This deprecation is overdue, please update your project and remove deprecated 2023-11-24T01:58:19,096 calls to avoid build errors in the future. 2023-11-24T01:58:19,097 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-24T01:58:19,097 ******************************************************************************** 2023-11-24T01:58:19,098 !! 2023-11-24T01:58:19,099 opt = self.warn_dash_deprecation(opt, section) 2023-11-24T01:58:19,099 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-24T01:58:19,100 !! 2023-11-24T01:58:19,101 ******************************************************************************** 2023-11-24T01:58:19,101 Usage of dash-separated 'description-file' will not be supported in future 2023-11-24T01:58:19,102 versions. Please use the underscore name 'description_file' instead. 2023-11-24T01:58:19,102 This deprecation is overdue, please update your project and remove deprecated 2023-11-24T01:58:19,103 calls to avoid build errors in the future. 2023-11-24T01:58:19,104 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-24T01:58:19,104 ******************************************************************************** 2023-11-24T01:58:19,105 !! 2023-11-24T01:58:19,105 opt = self.warn_dash_deprecation(opt, section) 2023-11-24T01:58:19,267 Preparing metadata (setup.py): finished with status 'done' 2023-11-24T01:58:19,279 Source in /tmp/pip-wheel-wx9mb5op/spagrn_8416a23c7ba84ed2a8f4f84171c0adc9 has version 1.0.6, which satisfies requirement spagrn==1.0.6 from https://files.pythonhosted.org/packages/9d/eb/efdf044e6cc97f354732882beccaff86f69b2ce40abbf0b4397ced708738/spagrn-1.0.6.tar.gz 2023-11-24T01:58:19,281 Removed spagrn==1.0.6 from https://files.pythonhosted.org/packages/9d/eb/efdf044e6cc97f354732882beccaff86f69b2ce40abbf0b4397ced708738/spagrn-1.0.6.tar.gz from build tracker '/tmp/pip-build-tracker-q37v0fm5' 2023-11-24T01:58:19,297 Created temporary directory: /tmp/pip-unpack-g94kyh9t 2023-11-24T01:58:19,299 Created temporary directory: /tmp/pip-unpack-3c_jug9a 2023-11-24T01:58:19,339 Building wheels for collected packages: spagrn 2023-11-24T01:58:19,348 Created temporary directory: /tmp/pip-wheel-i7474swe 2023-11-24T01:58:19,349 Building wheel for spagrn (setup.py): started 2023-11-24T01:58:19,351 Destination directory: /tmp/pip-wheel-i7474swe 2023-11-24T01:58:19,351 Running command python setup.py bdist_wheel 2023-11-24T01:58:20,524 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-24T01:58:20,526 !! 2023-11-24T01:58:20,526 ******************************************************************************** 2023-11-24T01:58:20,527 Usage of dash-separated 'description-file' will not be supported in future 2023-11-24T01:58:20,527 versions. Please use the underscore name 'description_file' instead. 2023-11-24T01:58:20,528 This deprecation is overdue, please update your project and remove deprecated 2023-11-24T01:58:20,528 calls to avoid build errors in the future. 2023-11-24T01:58:20,528 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-24T01:58:20,529 ******************************************************************************** 2023-11-24T01:58:20,529 !! 2023-11-24T01:58:20,530 opt = self.warn_dash_deprecation(opt, section) 2023-11-24T01:58:21,826 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:745: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-24T01:58:21,827 !! 2023-11-24T01:58:21,827 ******************************************************************************** 2023-11-24T01:58:21,828 Usage of dash-separated 'description-file' will not be supported in future 2023-11-24T01:58:21,828 versions. Please use the underscore name 'description_file' instead. 2023-11-24T01:58:21,829 This deprecation is overdue, please update your project and remove deprecated 2023-11-24T01:58:21,829 calls to avoid build errors in the future. 2023-11-24T01:58:21,830 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-24T01:58:21,830 ******************************************************************************** 2023-11-24T01:58:21,830 !! 2023-11-24T01:58:21,831 opt = self.warn_dash_deprecation(opt, section) 2023-11-24T01:58:21,922 running bdist_wheel 2023-11-24T01:58:22,272 running build 2023-11-24T01:58:22,273 running build_py 2023-11-24T01:58:22,346 creating build 2023-11-24T01:58:22,347 creating build/lib 2023-11-24T01:58:22,348 creating build/lib/spagrn 2023-11-24T01:58:22,351 copying spagrn/params.py -> build/lib/spagrn 2023-11-24T01:58:22,355 copying spagrn/spa_logger.py -> build/lib/spagrn 2023-11-24T01:58:22,359 copying spagrn/__init__.py -> build/lib/spagrn 2023-11-24T01:58:22,362 copying spagrn/plot.py -> build/lib/spagrn 2023-11-24T01:58:22,369 copying spagrn/main.py -> build/lib/spagrn 2023-11-24T01:58:22,373 copying spagrn/auprc.py -> build/lib/spagrn 2023-11-24T01:58:22,379 copying spagrn/results.py -> build/lib/spagrn 2023-11-24T01:58:22,383 copying spagrn/regulatory_network.py -> build/lib/spagrn 2023-11-24T01:58:22,389 copying spagrn/simulator.py -> build/lib/spagrn 2023-11-24T01:58:22,394 copying spagrn/scoexp.py -> build/lib/spagrn 2023-11-24T01:58:22,399 copying spagrn/network.py -> build/lib/spagrn 2023-11-24T01:58:22,473 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-11-24T01:58:22,473 !! 2023-11-24T01:58:22,474 ******************************************************************************** 2023-11-24T01:58:22,474 Please avoid running ``setup.py`` directly. 2023-11-24T01:58:22,475 Instead, use pypa/build, pypa/installer or other 2023-11-24T01:58:22,475 standards-based tools. 2023-11-24T01:58:22,476 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-11-24T01:58:22,476 ******************************************************************************** 2023-11-24T01:58:22,477 !! 2023-11-24T01:58:22,477 self.initialize_options() 2023-11-24T01:58:22,538 installing to build/bdist.linux-armv7l/wheel 2023-11-24T01:58:22,538 running install 2023-11-24T01:58:22,597 running install_lib 2023-11-24T01:58:22,665 creating build/bdist.linux-armv7l 2023-11-24T01:58:22,666 creating build/bdist.linux-armv7l/wheel 2023-11-24T01:58:22,670 creating build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,672 copying build/lib/spagrn/params.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,677 copying build/lib/spagrn/spa_logger.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,680 copying build/lib/spagrn/__init__.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,684 copying build/lib/spagrn/plot.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,690 copying build/lib/spagrn/main.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,694 copying build/lib/spagrn/auprc.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,701 copying build/lib/spagrn/results.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,705 copying build/lib/spagrn/regulatory_network.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,711 copying build/lib/spagrn/simulator.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,715 copying build/lib/spagrn/scoexp.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,720 copying build/lib/spagrn/network.py -> build/bdist.linux-armv7l/wheel/spagrn 2023-11-24T01:58:22,724 running install_egg_info 2023-11-24T01:58:22,802 running egg_info 2023-11-24T01:58:22,867 writing spagrn.egg-info/PKG-INFO 2023-11-24T01:58:22,871 writing dependency_links to spagrn.egg-info/dependency_links.txt 2023-11-24T01:58:22,874 writing entry points to spagrn.egg-info/entry_points.txt 2023-11-24T01:58:22,877 writing requirements to spagrn.egg-info/requires.txt 2023-11-24T01:58:22,879 writing top-level names to spagrn.egg-info/top_level.txt 2023-11-24T01:58:22,952 reading manifest file 'spagrn.egg-info/SOURCES.txt' 2023-11-24T01:58:22,957 adding license file 'LICENSE' 2023-11-24T01:58:22,963 writing manifest file 'spagrn.egg-info/SOURCES.txt' 2023-11-24T01:58:22,966 Copying spagrn.egg-info to build/bdist.linux-armv7l/wheel/spagrn-1.0.6-py3.7.egg-info 2023-11-24T01:58:22,994 running install_scripts 2023-11-24T01:58:23,038 creating build/bdist.linux-armv7l/wheel/spagrn-1.0.6.dist-info/WHEEL 2023-11-24T01:58:23,041 creating '/tmp/pip-wheel-i7474swe/spagrn-1.0.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-24T01:58:23,047 adding 'spagrn/__init__.py' 2023-11-24T01:58:23,056 adding 'spagrn/auprc.py' 2023-11-24T01:58:23,061 adding 'spagrn/main.py' 2023-11-24T01:58:23,066 adding 'spagrn/network.py' 2023-11-24T01:58:23,070 adding 'spagrn/params.py' 2023-11-24T01:58:23,080 adding 'spagrn/plot.py' 2023-11-24T01:58:23,090 adding 'spagrn/regulatory_network.py' 2023-11-24T01:58:23,094 adding 'spagrn/results.py' 2023-11-24T01:58:23,098 adding 'spagrn/scoexp.py' 2023-11-24T01:58:23,103 adding 'spagrn/simulator.py' 2023-11-24T01:58:23,107 adding 'spagrn/spa_logger.py' 2023-11-24T01:58:23,124 adding 'spagrn-1.0.6.dist-info/LICENSE' 2023-11-24T01:58:23,128 adding 'spagrn-1.0.6.dist-info/METADATA' 2023-11-24T01:58:23,130 adding 'spagrn-1.0.6.dist-info/WHEEL' 2023-11-24T01:58:23,134 adding 'spagrn-1.0.6.dist-info/entry_points.txt' 2023-11-24T01:58:23,136 adding 'spagrn-1.0.6.dist-info/top_level.txt' 2023-11-24T01:58:23,138 adding 'spagrn-1.0.6.dist-info/RECORD' 2023-11-24T01:58:23,143 removing build/bdist.linux-armv7l/wheel 2023-11-24T01:58:23,337 Building wheel for spagrn (setup.py): finished with status 'done' 2023-11-24T01:58:23,346 Created wheel for spagrn: filename=spagrn-1.0.6-py3-none-any.whl size=48559 sha256=07be01bc5bb4fea994462a1960a2b5dc58f3f5675fc9435eb1011afc372372f3 2023-11-24T01:58:23,348 Stored in directory: /tmp/pip-ephem-wheel-cache-gdk2593l/wheels/dd/ed/09/71f62c440c62bfb10cfe0992b0b6c981577bea9ccbfd0eb536 2023-11-24T01:58:23,377 Successfully built spagrn 2023-11-24T01:58:23,388 Removed build tracker: '/tmp/pip-build-tracker-q37v0fm5'