2023-11-24T08:41:33,188 Created temporary directory: /tmp/pip-build-tracker-x6yz0f9o 2023-11-24T08:41:33,190 Initialized build tracking at /tmp/pip-build-tracker-x6yz0f9o 2023-11-24T08:41:33,190 Created build tracker: /tmp/pip-build-tracker-x6yz0f9o 2023-11-24T08:41:33,191 Entered build tracker: /tmp/pip-build-tracker-x6yz0f9o 2023-11-24T08:41:33,191 Created temporary directory: /tmp/pip-wheel-gchvimax 2023-11-24T08:41:33,194 Created temporary directory: /tmp/pip-ephem-wheel-cache-fq9wv9ag 2023-11-24T08:41:33,220 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-24T08:41:33,224 2 location(s) to search for versions of mhubio: 2023-11-24T08:41:33,224 * https://pypi.org/simple/mhubio/ 2023-11-24T08:41:33,224 * https://www.piwheels.org/simple/mhubio/ 2023-11-24T08:41:33,224 Fetching project page and analyzing links: https://pypi.org/simple/mhubio/ 2023-11-24T08:41:33,225 Getting page https://pypi.org/simple/mhubio/ 2023-11-24T08:41:33,227 Found index url https://pypi.org/simple/ 2023-11-24T08:41:33,479 Fetched page https://pypi.org/simple/mhubio/ as application/vnd.pypi.simple.v1+json 2023-11-24T08:41:33,480 Skipping link: No binaries permitted for mhubio: https://files.pythonhosted.org/packages/9f/3e/fb2bdac92e8f319e679e524d90309affb9ee13ead6ba4ea5aa4ca2b740a8/mhubio-0.0.1-py3-none-any.whl (from https://pypi.org/simple/mhubio/) 2023-11-24T08:41:33,481 Found link https://files.pythonhosted.org/packages/72/2a/9b11a6dd0b138e80ee57b59f65014f3394f825c460d164589a23fa1f6017/mhubio-0.0.1.tar.gz (from https://pypi.org/simple/mhubio/), version: 0.0.1 2023-11-24T08:41:33,482 Skipping link: No binaries permitted for mhubio: https://files.pythonhosted.org/packages/48/31/99e77f138c76a861cded43dfe748bdd4bc5f20cab3548d181bdda56a6419/mhubio-0.0.2-py3-none-any.whl (from https://pypi.org/simple/mhubio/) 2023-11-24T08:41:33,482 Found link https://files.pythonhosted.org/packages/a2/c2/2f03edfb53949c7ddb6c3e16d429228d5cd843c13d08fa1730db4e165e3e/mhubio-0.0.2.tar.gz (from https://pypi.org/simple/mhubio/), version: 0.0.2 2023-11-24T08:41:33,483 Fetching project page and analyzing links: https://www.piwheels.org/simple/mhubio/ 2023-11-24T08:41:33,484 Getting page https://www.piwheels.org/simple/mhubio/ 2023-11-24T08:41:33,485 Found index url https://www.piwheels.org/simple/ 2023-11-24T08:41:33,656 Fetched page https://www.piwheels.org/simple/mhubio/ as text/html 2023-11-24T08:41:33,657 Skipping link: not a file: https://www.piwheels.org/simple/mhubio/ 2023-11-24T08:41:33,658 Skipping link: not a file: https://pypi.org/simple/mhubio/ 2023-11-24T08:41:33,678 Given no hashes to check 1 links for project 'mhubio': discarding no candidates 2023-11-24T08:41:33,697 Collecting mhubio==0.0.1 2023-11-24T08:41:33,700 Created temporary directory: /tmp/pip-unpack-ch6_8wa_ 2023-11-24T08:41:33,845 Downloading mhubio-0.0.1.tar.gz (87 kB) 2023-11-24T08:41:34,072 Added mhubio==0.0.1 from https://files.pythonhosted.org/packages/72/2a/9b11a6dd0b138e80ee57b59f65014f3394f825c460d164589a23fa1f6017/mhubio-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-x6yz0f9o' 2023-11-24T08:41:34,074 Running setup.py (path:/tmp/pip-wheel-gchvimax/mhubio_397041d8379149fc81be5abe0930220d/setup.py) egg_info for package mhubio 2023-11-24T08:41:34,075 Created temporary directory: /tmp/pip-pip-egg-info-d5sp5pcb 2023-11-24T08:41:34,076 Preparing metadata (setup.py): started 2023-11-24T08:41:34,077 Running command python setup.py egg_info 2023-11-24T08:41:35,105 running egg_info 2023-11-24T08:41:35,107 creating /tmp/pip-pip-egg-info-d5sp5pcb/mhubio.egg-info 2023-11-24T08:41:35,132 writing /tmp/pip-pip-egg-info-d5sp5pcb/mhubio.egg-info/PKG-INFO 2023-11-24T08:41:35,135 writing dependency_links to /tmp/pip-pip-egg-info-d5sp5pcb/mhubio.egg-info/dependency_links.txt 2023-11-24T08:41:35,137 writing top-level names to /tmp/pip-pip-egg-info-d5sp5pcb/mhubio.egg-info/top_level.txt 2023-11-24T08:41:35,139 writing manifest file '/tmp/pip-pip-egg-info-d5sp5pcb/mhubio.egg-info/SOURCES.txt' 2023-11-24T08:41:35,226 reading manifest file '/tmp/pip-pip-egg-info-d5sp5pcb/mhubio.egg-info/SOURCES.txt' 2023-11-24T08:41:35,230 writing manifest file '/tmp/pip-pip-egg-info-d5sp5pcb/mhubio.egg-info/SOURCES.txt' 2023-11-24T08:41:35,340 Preparing metadata (setup.py): finished with status 'done' 2023-11-24T08:41:35,343 Source in /tmp/pip-wheel-gchvimax/mhubio_397041d8379149fc81be5abe0930220d has version 0.0.1, which satisfies requirement mhubio==0.0.1 from https://files.pythonhosted.org/packages/72/2a/9b11a6dd0b138e80ee57b59f65014f3394f825c460d164589a23fa1f6017/mhubio-0.0.1.tar.gz 2023-11-24T08:41:35,344 Removed mhubio==0.0.1 from https://files.pythonhosted.org/packages/72/2a/9b11a6dd0b138e80ee57b59f65014f3394f825c460d164589a23fa1f6017/mhubio-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-x6yz0f9o' 2023-11-24T08:41:35,348 Created temporary directory: /tmp/pip-unpack-igj7upog 2023-11-24T08:41:35,349 Created temporary directory: /tmp/pip-unpack-suk91icy 2023-11-24T08:41:35,352 Building wheels for collected packages: mhubio 2023-11-24T08:41:35,355 Created temporary directory: /tmp/pip-wheel-dxqjqfkr 2023-11-24T08:41:35,356 Building wheel for mhubio (setup.py): started 2023-11-24T08:41:35,357 Destination directory: /tmp/pip-wheel-dxqjqfkr 2023-11-24T08:41:35,358 Running command python setup.py bdist_wheel 2023-11-24T08:41:36,342 running bdist_wheel 2023-11-24T08:41:36,435 running build 2023-11-24T08:41:36,436 running build_py 2023-11-24T08:41:36,462 creating build 2023-11-24T08:41:36,463 creating build/lib 2023-11-24T08:41:36,463 creating build/lib/test 2023-11-24T08:41:36,464 copying test/config_test.py -> build/lib/test 2023-11-24T08:41:36,467 copying test/dchain_test.py -> build/lib/test 2023-11-24T08:41:36,469 copying test/__init__.py -> build/lib/test 2023-11-24T08:41:36,470 copying test/datatype_query_test.py -> build/lib/test 2023-11-24T08:41:36,472 copying test/meta_test.py -> build/lib/test 2023-11-24T08:41:36,474 copying test/flist_importer_test.py -> build/lib/test 2023-11-24T08:41:36,476 copying test/fstruct_importer_test.py -> build/lib/test 2023-11-24T08:41:36,478 copying test/convert_test.py -> build/lib/test 2023-11-24T08:41:36,480 copying test/instdatacol_test.py -> build/lib/test 2023-11-24T08:41:36,482 copying test/import_test.py -> build/lib/test 2023-11-24T08:41:36,484 creating build/lib/mhubio 2023-11-24T08:41:36,485 copying mhubio/__init__.py -> build/lib/mhubio 2023-11-24T08:41:36,487 copying mhubio/run.py -> build/lib/mhubio 2023-11-24T08:41:36,489 copying mhubio/keys.py -> build/lib/mhubio 2023-11-24T08:41:36,491 creating build/lib/mhubio/modules 2023-11-24T08:41:36,492 copying mhubio/modules/__init__.py -> build/lib/mhubio/modules 2023-11-24T08:41:36,494 creating build/lib/mhubio/utils 2023-11-24T08:41:36,495 copying mhubio/utils/__init__.py -> build/lib/mhubio/utils 2023-11-24T08:41:36,497 copying mhubio/utils/printing.py -> build/lib/mhubio/utils 2023-11-24T08:41:36,499 creating build/lib/mhubio/core 2023-11-24T08:41:36,500 copying mhubio/core/Logger.py -> build/lib/mhubio/core 2023-11-24T08:41:36,503 copying mhubio/core/InstanceDataBundle.py -> build/lib/mhubio/core 2023-11-24T08:41:36,504 copying mhubio/core/InstanceDataCollection.py -> build/lib/mhubio/core 2023-11-24T08:41:36,507 copying mhubio/core/Error.py -> build/lib/mhubio/core 2023-11-24T08:41:36,508 copying mhubio/core/Instance.py -> build/lib/mhubio/core 2023-11-24T08:41:36,510 copying mhubio/core/__init__.py -> build/lib/mhubio/core 2023-11-24T08:41:36,512 copying mhubio/core/Config.py -> build/lib/mhubio/core 2023-11-24T08:41:36,514 copying mhubio/core/DataHandler.py -> build/lib/mhubio/core 2023-11-24T08:41:36,516 copying mhubio/core/InstanceData.py -> build/lib/mhubio/core 2023-11-24T08:41:36,518 copying mhubio/core/Module.py -> build/lib/mhubio/core 2023-11-24T08:41:36,520 copying mhubio/core/RunnerOutput.py -> build/lib/mhubio/core 2023-11-24T08:41:36,522 copying mhubio/core/FileType.py -> build/lib/mhubio/core 2023-11-24T08:41:36,524 copying mhubio/core/Meta.py -> build/lib/mhubio/core 2023-11-24T08:41:36,525 copying mhubio/core/IO.py -> build/lib/mhubio/core 2023-11-24T08:41:36,528 copying mhubio/core/DirectoryChain.py -> build/lib/mhubio/core 2023-11-24T08:41:36,530 copying mhubio/core/DataTypeQuery.py -> build/lib/mhubio/core 2023-11-24T08:41:36,532 copying mhubio/core/templates.py -> build/lib/mhubio/core 2023-11-24T08:41:36,534 copying mhubio/core/IO_wip.py -> build/lib/mhubio/core 2023-11-24T08:41:36,536 copying mhubio/core/OutputDataCollection.py -> build/lib/mhubio/core 2023-11-24T08:41:36,537 copying mhubio/core/DataHandler2.py -> build/lib/mhubio/core 2023-11-24T08:41:36,540 copying mhubio/core/DataType.py -> build/lib/mhubio/core 2023-11-24T08:41:36,542 creating build/lib/mhubio/modules/exporter 2023-11-24T08:41:36,542 copying mhubio/modules/exporter/JsonSegExporter.py -> build/lib/mhubio/modules/exporter 2023-11-24T08:41:36,544 copying mhubio/modules/exporter/ReportExporter.py -> build/lib/mhubio/modules/exporter 2023-11-24T08:41:36,546 copying mhubio/modules/exporter/__init__.py -> build/lib/mhubio/modules/exporter 2023-11-24T08:41:36,547 copying mhubio/modules/exporter/ImageExporter.py -> build/lib/mhubio/modules/exporter 2023-11-24T08:41:36,549 creating build/lib/mhubio/modules/convert 2023-11-24T08:41:36,550 copying mhubio/modules/convert/DsegConverter.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,553 copying mhubio/modules/convert/__init__.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,554 copying mhubio/modules/convert/NiftiConverter.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,556 copying mhubio/modules/convert/DicomConverter.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,558 copying mhubio/modules/convert/MhaConverter.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,560 copying mhubio/modules/convert/RTStructConverter.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,562 copying mhubio/modules/convert/NrrdConverter.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,564 copying mhubio/modules/convert/RTStructConverter_DSEG.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,566 copying mhubio/modules/convert/DataConverter.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,568 copying mhubio/modules/convert/MhaConverterPanimg.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,569 copying mhubio/modules/convert/TiffConverter.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,572 copying mhubio/modules/convert/NiftiConverter__old.py -> build/lib/mhubio/modules/convert 2023-11-24T08:41:36,574 creating build/lib/mhubio/modules/runner 2023-11-24T08:41:36,575 copying mhubio/modules/runner/NNUnetRunner.py -> build/lib/mhubio/modules/runner 2023-11-24T08:41:36,578 copying mhubio/modules/runner/__init__.py -> build/lib/mhubio/modules/runner 2023-11-24T08:41:36,579 copying mhubio/modules/runner/ModelRunner.py -> build/lib/mhubio/modules/runner 2023-11-24T08:41:36,581 copying mhubio/modules/runner/DummyRunner.py -> build/lib/mhubio/modules/runner 2023-11-24T08:41:36,583 creating build/lib/mhubio/modules/processor 2023-11-24T08:41:36,584 copying mhubio/modules/processor/__init__.py -> build/lib/mhubio/modules/processor 2023-11-24T08:41:36,585 copying mhubio/modules/processor/Resampler.py -> build/lib/mhubio/modules/processor 2023-11-24T08:41:36,587 copying mhubio/modules/processor/DataProcessor.py -> build/lib/mhubio/modules/processor 2023-11-24T08:41:36,590 creating build/lib/mhubio/modules/organizer 2023-11-24T08:41:36,591 copying mhubio/modules/organizer/__init__.py -> build/lib/mhubio/modules/organizer 2023-11-24T08:41:36,592 copying mhubio/modules/organizer/DataOrganizer.py -> build/lib/mhubio/modules/organizer 2023-11-24T08:41:36,594 copying mhubio/modules/organizer/DataSorter.py -> build/lib/mhubio/modules/organizer 2023-11-24T08:41:36,597 creating build/lib/mhubio/modules/importer 2023-11-24T08:41:36,598 copying mhubio/modules/importer/DicomImporter.py -> build/lib/mhubio/modules/importer 2023-11-24T08:41:36,600 copying mhubio/modules/importer/__init__.py -> build/lib/mhubio/modules/importer 2023-11-24T08:41:36,602 copying mhubio/modules/importer/FileStructureImporter.py -> build/lib/mhubio/modules/importer 2023-11-24T08:41:36,604 copying mhubio/modules/importer/FilieListImporter.py -> build/lib/mhubio/modules/importer 2023-11-24T08:41:36,606 copying mhubio/modules/importer/UnsortedDicomImporter.py -> build/lib/mhubio/modules/importer 2023-11-24T08:41:36,608 copying mhubio/modules/importer/DataSorter.py -> build/lib/mhubio/modules/importer 2023-11-24T08:41:36,609 copying mhubio/modules/importer/DataImporter.py -> build/lib/mhubio/modules/importer 2023-11-24T08:41:36,612 copying mhubio/modules/importer/NrrdImporter.py -> build/lib/mhubio/modules/importer 2023-11-24T08:41:36,614 creating build/lib/mhubio/modules/filter 2023-11-24T08:41:36,614 copying mhubio/modules/filter/__init__.py -> build/lib/mhubio/modules/filter 2023-11-24T08:41:36,616 copying mhubio/modules/filter/FileFilter.py -> build/lib/mhubio/modules/filter 2023-11-24T08:41:36,618 copying mhubio/modules/filter/AttributeFilter.py -> build/lib/mhubio/modules/filter 2023-11-24T08:41:36,619 copying mhubio/modules/filter/InstanceFilter.py -> build/lib/mhubio/modules/filter 2023-11-24T08:41:36,621 running egg_info 2023-11-24T08:41:36,677 writing mhubio.egg-info/PKG-INFO 2023-11-24T08:41:36,679 writing dependency_links to mhubio.egg-info/dependency_links.txt 2023-11-24T08:41:36,681 writing top-level names to mhubio.egg-info/top_level.txt 2023-11-24T08:41:36,715 reading manifest file 'mhubio.egg-info/SOURCES.txt' 2023-11-24T08:41:36,722 writing manifest file 'mhubio.egg-info/SOURCES.txt' 2023-11-24T08:41:36,725 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'mhubio.experiments' is absent from the `packages` configuration. 2023-11-24T08:41:36,725 !! 2023-11-24T08:41:36,727 ******************************************************************************** 2023-11-24T08:41:36,727 ############################ 2023-11-24T08:41:36,728 # Package would be ignored # 2023-11-24T08:41:36,728 ############################ 2023-11-24T08:41:36,729 Python recognizes 'mhubio.experiments' as an importable package[^1], 2023-11-24T08:41:36,730 but it is absent from setuptools' `packages` configuration. 2023-11-24T08:41:36,731 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-24T08:41:36,731 package, please make sure that 'mhubio.experiments' is explicitly added 2023-11-24T08:41:36,732 to the `packages` configuration field. 2023-11-24T08:41:36,733 Alternatively, you can also rely on setuptools' discovery methods 2023-11-24T08:41:36,733 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-24T08:41:36,734 instead of `find_packages(...)`/`find:`). 2023-11-24T08:41:36,735 You can read more about "package discovery" on setuptools documentation page: 2023-11-24T08:41:36,736 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-24T08:41:36,737 If you don't want 'mhubio.experiments' to be distributed and are 2023-11-24T08:41:36,737 already explicitly excluding 'mhubio.experiments' via 2023-11-24T08:41:36,738 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-24T08:41:36,738 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-24T08:41:36,739 combination with a more fine grained `package-data` configuration. 2023-11-24T08:41:36,740 You can read more about "package data files" on setuptools documentation page: 2023-11-24T08:41:36,741 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-24T08:41:36,743 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-24T08:41:36,744 even if it does not contain any `.py` files. 2023-11-24T08:41:36,744 On the other hand, currently there is no concept of package data 2023-11-24T08:41:36,745 directory, all directories are treated like packages. 2023-11-24T08:41:36,745 ******************************************************************************** 2023-11-24T08:41:36,746 !! 2023-11-24T08:41:36,747 check.warn(importable) 2023-11-24T08:41:36,747 creating build/lib/mhubio/experiments 2023-11-24T08:41:36,748 copying mhubio/experiments/configtest.py -> build/lib/mhubio/experiments 2023-11-24T08:41:36,748 copying mhubio/experiments/dicomseg.py -> build/lib/mhubio/experiments 2023-11-24T08:41:36,748 copying mhubio/experiments/empty_dict_issue.py -> build/lib/mhubio/experiments 2023-11-24T08:41:36,749 copying mhubio/experiments/metatest.py -> build/lib/mhubio/experiments 2023-11-24T08:41:36,749 copying mhubio/experiments/organizer.py -> build/lib/mhubio/experiments 2023-11-24T08:41:36,750 copying mhubio/experiments/run.min.py -> build/lib/mhubio/experiments 2023-11-24T08:41:36,750 copying mhubio/experiments/run.py -> build/lib/mhubio/experiments 2023-11-24T08:41:36,751 copying mhubio/experiments/test.py -> build/lib/mhubio/experiments 2023-11-24T08:41:36,780 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-11-24T08:41:36,781 !! 2023-11-24T08:41:36,782 ******************************************************************************** 2023-11-24T08:41:36,782 Please avoid running ``setup.py`` directly. 2023-11-24T08:41:36,783 Instead, use pypa/build, pypa/installer or other 2023-11-24T08:41:36,783 standards-based tools. 2023-11-24T08:41:36,784 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-11-24T08:41:36,785 ******************************************************************************** 2023-11-24T08:41:36,786 !! 2023-11-24T08:41:36,786 self.initialize_options() 2023-11-24T08:41:36,805 installing to build/bdist.linux-armv7l/wheel 2023-11-24T08:41:36,806 running install 2023-11-24T08:41:36,829 running install_lib 2023-11-24T08:41:36,853 creating build/bdist.linux-armv7l 2023-11-24T08:41:36,853 creating build/bdist.linux-armv7l/wheel 2023-11-24T08:41:36,855 creating build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,856 copying build/lib/test/config_test.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,858 copying build/lib/test/dchain_test.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,861 copying build/lib/test/__init__.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,862 copying build/lib/test/datatype_query_test.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,865 copying build/lib/test/meta_test.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,867 copying build/lib/test/flist_importer_test.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,868 copying build/lib/test/fstruct_importer_test.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,871 copying build/lib/test/convert_test.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,873 copying build/lib/test/instdatacol_test.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,875 copying build/lib/test/import_test.py -> build/bdist.linux-armv7l/wheel/test 2023-11-24T08:41:36,878 creating build/bdist.linux-armv7l/wheel/mhubio 2023-11-24T08:41:36,879 creating build/bdist.linux-armv7l/wheel/mhubio/modules 2023-11-24T08:41:36,881 creating build/bdist.linux-armv7l/wheel/mhubio/modules/exporter 2023-11-24T08:41:36,882 copying build/lib/mhubio/modules/exporter/JsonSegExporter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/exporter 2023-11-24T08:41:36,884 copying build/lib/mhubio/modules/exporter/ReportExporter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/exporter 2023-11-24T08:41:36,886 copying build/lib/mhubio/modules/exporter/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/exporter 2023-11-24T08:41:36,888 copying build/lib/mhubio/modules/exporter/ImageExporter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/exporter 2023-11-24T08:41:36,890 creating build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,891 copying build/lib/mhubio/modules/convert/DsegConverter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,893 copying build/lib/mhubio/modules/convert/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,895 copying build/lib/mhubio/modules/convert/NiftiConverter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,897 copying build/lib/mhubio/modules/convert/DicomConverter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,899 copying build/lib/mhubio/modules/convert/MhaConverter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,901 copying build/lib/mhubio/modules/convert/RTStructConverter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,903 copying build/lib/mhubio/modules/convert/NrrdConverter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,905 copying build/lib/mhubio/modules/convert/RTStructConverter_DSEG.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,907 copying build/lib/mhubio/modules/convert/DataConverter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,909 copying build/lib/mhubio/modules/convert/MhaConverterPanimg.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,911 copying build/lib/mhubio/modules/convert/TiffConverter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,914 copying build/lib/mhubio/modules/convert/NiftiConverter__old.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/convert 2023-11-24T08:41:36,916 copying build/lib/mhubio/modules/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/modules 2023-11-24T08:41:36,918 creating build/bdist.linux-armv7l/wheel/mhubio/modules/runner 2023-11-24T08:41:36,919 copying build/lib/mhubio/modules/runner/NNUnetRunner.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/runner 2023-11-24T08:41:36,921 copying build/lib/mhubio/modules/runner/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/runner 2023-11-24T08:41:36,923 copying build/lib/mhubio/modules/runner/ModelRunner.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/runner 2023-11-24T08:41:36,925 copying build/lib/mhubio/modules/runner/DummyRunner.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/runner 2023-11-24T08:41:36,927 creating build/bdist.linux-armv7l/wheel/mhubio/modules/processor 2023-11-24T08:41:36,928 copying build/lib/mhubio/modules/processor/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/processor 2023-11-24T08:41:36,929 copying build/lib/mhubio/modules/processor/Resampler.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/processor 2023-11-24T08:41:36,931 copying build/lib/mhubio/modules/processor/DataProcessor.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/processor 2023-11-24T08:41:36,933 creating build/bdist.linux-armv7l/wheel/mhubio/modules/organizer 2023-11-24T08:41:36,934 copying build/lib/mhubio/modules/organizer/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/organizer 2023-11-24T08:41:36,936 copying build/lib/mhubio/modules/organizer/DataOrganizer.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/organizer 2023-11-24T08:41:36,938 copying build/lib/mhubio/modules/organizer/DataSorter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/organizer 2023-11-24T08:41:36,941 creating build/bdist.linux-armv7l/wheel/mhubio/modules/importer 2023-11-24T08:41:36,941 copying build/lib/mhubio/modules/importer/DicomImporter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/importer 2023-11-24T08:41:36,944 copying build/lib/mhubio/modules/importer/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/importer 2023-11-24T08:41:36,946 copying build/lib/mhubio/modules/importer/FileStructureImporter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/importer 2023-11-24T08:41:36,948 copying build/lib/mhubio/modules/importer/FilieListImporter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/importer 2023-11-24T08:41:36,950 copying build/lib/mhubio/modules/importer/UnsortedDicomImporter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/importer 2023-11-24T08:41:36,952 copying build/lib/mhubio/modules/importer/DataSorter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/importer 2023-11-24T08:41:36,954 copying build/lib/mhubio/modules/importer/DataImporter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/importer 2023-11-24T08:41:36,956 copying build/lib/mhubio/modules/importer/NrrdImporter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/importer 2023-11-24T08:41:36,958 creating build/bdist.linux-armv7l/wheel/mhubio/modules/filter 2023-11-24T08:41:36,959 copying build/lib/mhubio/modules/filter/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/filter 2023-11-24T08:41:36,961 copying build/lib/mhubio/modules/filter/FileFilter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/filter 2023-11-24T08:41:36,963 copying build/lib/mhubio/modules/filter/AttributeFilter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/filter 2023-11-24T08:41:36,964 copying build/lib/mhubio/modules/filter/InstanceFilter.py -> build/bdist.linux-armv7l/wheel/mhubio/modules/filter 2023-11-24T08:41:36,967 creating build/bdist.linux-armv7l/wheel/mhubio/utils 2023-11-24T08:41:36,968 copying build/lib/mhubio/utils/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/utils 2023-11-24T08:41:36,969 copying build/lib/mhubio/utils/printing.py -> build/bdist.linux-armv7l/wheel/mhubio/utils 2023-11-24T08:41:36,971 copying build/lib/mhubio/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio 2023-11-24T08:41:36,973 copying build/lib/mhubio/run.py -> build/bdist.linux-armv7l/wheel/mhubio 2023-11-24T08:41:36,976 creating build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,977 copying build/lib/mhubio/core/Logger.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,980 copying build/lib/mhubio/core/InstanceDataBundle.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,982 copying build/lib/mhubio/core/InstanceDataCollection.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,984 copying build/lib/mhubio/core/Error.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,986 copying build/lib/mhubio/core/Instance.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,988 copying build/lib/mhubio/core/__init__.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,990 copying build/lib/mhubio/core/Config.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,992 copying build/lib/mhubio/core/DataHandler.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,994 copying build/lib/mhubio/core/InstanceData.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,997 copying build/lib/mhubio/core/Module.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:36,998 copying build/lib/mhubio/core/RunnerOutput.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,001 copying build/lib/mhubio/core/FileType.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,003 copying build/lib/mhubio/core/Meta.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,005 copying build/lib/mhubio/core/IO.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,007 copying build/lib/mhubio/core/DirectoryChain.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,010 copying build/lib/mhubio/core/DataTypeQuery.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,012 copying build/lib/mhubio/core/templates.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,014 copying build/lib/mhubio/core/IO_wip.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,017 copying build/lib/mhubio/core/OutputDataCollection.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,019 copying build/lib/mhubio/core/DataHandler2.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,021 copying build/lib/mhubio/core/DataType.py -> build/bdist.linux-armv7l/wheel/mhubio/core 2023-11-24T08:41:37,023 copying build/lib/mhubio/keys.py -> build/bdist.linux-armv7l/wheel/mhubio 2023-11-24T08:41:37,025 creating build/bdist.linux-armv7l/wheel/mhubio/experiments 2023-11-24T08:41:37,026 copying build/lib/mhubio/experiments/run.py -> build/bdist.linux-armv7l/wheel/mhubio/experiments 2023-11-24T08:41:37,028 copying build/lib/mhubio/experiments/configtest.py -> build/bdist.linux-armv7l/wheel/mhubio/experiments 2023-11-24T08:41:37,029 copying build/lib/mhubio/experiments/organizer.py -> build/bdist.linux-armv7l/wheel/mhubio/experiments 2023-11-24T08:41:37,031 copying build/lib/mhubio/experiments/empty_dict_issue.py -> build/bdist.linux-armv7l/wheel/mhubio/experiments 2023-11-24T08:41:37,033 copying build/lib/mhubio/experiments/test.py -> build/bdist.linux-armv7l/wheel/mhubio/experiments 2023-11-24T08:41:37,035 copying build/lib/mhubio/experiments/run.min.py -> build/bdist.linux-armv7l/wheel/mhubio/experiments 2023-11-24T08:41:37,037 copying build/lib/mhubio/experiments/dicomseg.py -> build/bdist.linux-armv7l/wheel/mhubio/experiments 2023-11-24T08:41:37,039 copying build/lib/mhubio/experiments/metatest.py -> build/bdist.linux-armv7l/wheel/mhubio/experiments 2023-11-24T08:41:37,040 running install_egg_info 2023-11-24T08:41:37,071 Copying mhubio.egg-info to build/bdist.linux-armv7l/wheel/mhubio-0.0.1-py3.11.egg-info 2023-11-24T08:41:37,079 running install_scripts 2023-11-24T08:41:37,089 creating build/bdist.linux-armv7l/wheel/mhubio-0.0.1.dist-info/WHEEL 2023-11-24T08:41:37,091 creating '/tmp/pip-wheel-dxqjqfkr/mhubio-0.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-24T08:41:37,094 adding 'mhubio/__init__.py' 2023-11-24T08:41:37,095 adding 'mhubio/keys.py' 2023-11-24T08:41:37,098 adding 'mhubio/run.py' 2023-11-24T08:41:37,101 adding 'mhubio/core/Config.py' 2023-11-24T08:41:37,102 adding 'mhubio/core/DataHandler.py' 2023-11-24T08:41:37,104 adding 'mhubio/core/DataHandler2.py' 2023-11-24T08:41:37,106 adding 'mhubio/core/DataType.py' 2023-11-24T08:41:37,108 adding 'mhubio/core/DataTypeQuery.py' 2023-11-24T08:41:37,110 adding 'mhubio/core/DirectoryChain.py' 2023-11-24T08:41:37,111 adding 'mhubio/core/Error.py' 2023-11-24T08:41:37,112 adding 'mhubio/core/FileType.py' 2023-11-24T08:41:37,115 adding 'mhubio/core/IO.py' 2023-11-24T08:41:37,117 adding 'mhubio/core/IO_wip.py' 2023-11-24T08:41:37,119 adding 'mhubio/core/Instance.py' 2023-11-24T08:41:37,121 adding 'mhubio/core/InstanceData.py' 2023-11-24T08:41:37,122 adding 'mhubio/core/InstanceDataBundle.py' 2023-11-24T08:41:37,124 adding 'mhubio/core/InstanceDataCollection.py' 2023-11-24T08:41:37,126 adding 'mhubio/core/Logger.py' 2023-11-24T08:41:37,128 adding 'mhubio/core/Meta.py' 2023-11-24T08:41:37,130 adding 'mhubio/core/Module.py' 2023-11-24T08:41:37,131 adding 'mhubio/core/OutputDataCollection.py' 2023-11-24T08:41:37,133 adding 'mhubio/core/RunnerOutput.py' 2023-11-24T08:41:37,134 adding 'mhubio/core/__init__.py' 2023-11-24T08:41:37,136 adding 'mhubio/core/templates.py' 2023-11-24T08:41:37,138 adding 'mhubio/experiments/configtest.py' 2023-11-24T08:41:37,139 adding 'mhubio/experiments/dicomseg.py' 2023-11-24T08:41:37,140 adding 'mhubio/experiments/empty_dict_issue.py' 2023-11-24T08:41:37,142 adding 'mhubio/experiments/metatest.py' 2023-11-24T08:41:37,143 adding 'mhubio/experiments/organizer.py' 2023-11-24T08:41:37,145 adding 'mhubio/experiments/run.min.py' 2023-11-24T08:41:37,146 adding 'mhubio/experiments/run.py' 2023-11-24T08:41:37,148 adding 'mhubio/experiments/test.py' 2023-11-24T08:41:37,150 adding 'mhubio/modules/__init__.py' 2023-11-24T08:41:37,151 adding 'mhubio/modules/convert/DataConverter.py' 2023-11-24T08:41:37,153 adding 'mhubio/modules/convert/DicomConverter.py' 2023-11-24T08:41:37,154 adding 'mhubio/modules/convert/DsegConverter.py' 2023-11-24T08:41:37,156 adding 'mhubio/modules/convert/MhaConverter.py' 2023-11-24T08:41:37,157 adding 'mhubio/modules/convert/MhaConverterPanimg.py' 2023-11-24T08:41:37,159 adding 'mhubio/modules/convert/NiftiConverter.py' 2023-11-24T08:41:37,161 adding 'mhubio/modules/convert/NiftiConverter__old.py' 2023-11-24T08:41:37,162 adding 'mhubio/modules/convert/NrrdConverter.py' 2023-11-24T08:41:37,164 adding 'mhubio/modules/convert/RTStructConverter.py' 2023-11-24T08:41:37,165 adding 'mhubio/modules/convert/RTStructConverter_DSEG.py' 2023-11-24T08:41:37,167 adding 'mhubio/modules/convert/TiffConverter.py' 2023-11-24T08:41:37,168 adding 'mhubio/modules/convert/__init__.py' 2023-11-24T08:41:37,169 adding 'mhubio/modules/exporter/ImageExporter.py' 2023-11-24T08:41:37,171 adding 'mhubio/modules/exporter/JsonSegExporter.py' 2023-11-24T08:41:37,172 adding 'mhubio/modules/exporter/ReportExporter.py' 2023-11-24T08:41:37,174 adding 'mhubio/modules/exporter/__init__.py' 2023-11-24T08:41:37,175 adding 'mhubio/modules/filter/AttributeFilter.py' 2023-11-24T08:41:37,177 adding 'mhubio/modules/filter/FileFilter.py' 2023-11-24T08:41:37,178 adding 'mhubio/modules/filter/InstanceFilter.py' 2023-11-24T08:41:37,179 adding 'mhubio/modules/filter/__init__.py' 2023-11-24T08:41:37,181 adding 'mhubio/modules/importer/DataImporter.py' 2023-11-24T08:41:37,183 adding 'mhubio/modules/importer/DataSorter.py' 2023-11-24T08:41:37,184 adding 'mhubio/modules/importer/DicomImporter.py' 2023-11-24T08:41:37,188 adding 'mhubio/modules/importer/FileStructureImporter.py' 2023-11-24T08:41:37,189 adding 'mhubio/modules/importer/FilieListImporter.py' 2023-11-24T08:41:37,190 adding 'mhubio/modules/importer/NrrdImporter.py' 2023-11-24T08:41:37,192 adding 'mhubio/modules/importer/UnsortedDicomImporter.py' 2023-11-24T08:41:37,193 adding 'mhubio/modules/importer/__init__.py' 2023-11-24T08:41:37,195 adding 'mhubio/modules/organizer/DataOrganizer.py' 2023-11-24T08:41:37,196 adding 'mhubio/modules/organizer/DataSorter.py' 2023-11-24T08:41:37,197 adding 'mhubio/modules/organizer/__init__.py' 2023-11-24T08:41:37,199 adding 'mhubio/modules/processor/DataProcessor.py' 2023-11-24T08:41:37,201 adding 'mhubio/modules/processor/Resampler.py' 2023-11-24T08:41:37,202 adding 'mhubio/modules/processor/__init__.py' 2023-11-24T08:41:37,204 adding 'mhubio/modules/runner/DummyRunner.py' 2023-11-24T08:41:37,205 adding 'mhubio/modules/runner/ModelRunner.py' 2023-11-24T08:41:37,207 adding 'mhubio/modules/runner/NNUnetRunner.py' 2023-11-24T08:41:37,208 adding 'mhubio/modules/runner/__init__.py' 2023-11-24T08:41:37,210 adding 'mhubio/utils/__init__.py' 2023-11-24T08:41:37,211 adding 'mhubio/utils/printing.py' 2023-11-24T08:41:37,214 adding 'test/__init__.py' 2023-11-24T08:41:37,215 adding 'test/config_test.py' 2023-11-24T08:41:37,217 adding 'test/convert_test.py' 2023-11-24T08:41:37,219 adding 'test/datatype_query_test.py' 2023-11-24T08:41:37,221 adding 'test/dchain_test.py' 2023-11-24T08:41:37,222 adding 'test/flist_importer_test.py' 2023-11-24T08:41:37,224 adding 'test/fstruct_importer_test.py' 2023-11-24T08:41:37,226 adding 'test/import_test.py' 2023-11-24T08:41:37,228 adding 'test/instdatacol_test.py' 2023-11-24T08:41:37,229 adding 'test/meta_test.py' 2023-11-24T08:41:37,230 adding 'mhubio-0.0.1.dist-info/METADATA' 2023-11-24T08:41:37,231 adding 'mhubio-0.0.1.dist-info/WHEEL' 2023-11-24T08:41:37,232 adding 'mhubio-0.0.1.dist-info/top_level.txt' 2023-11-24T08:41:37,234 adding 'mhubio-0.0.1.dist-info/RECORD' 2023-11-24T08:41:37,240 removing build/bdist.linux-armv7l/wheel 2023-11-24T08:41:37,375 Building wheel for mhubio (setup.py): finished with status 'done' 2023-11-24T08:41:37,379 Created wheel for mhubio: filename=mhubio-0.0.1-py3-none-any.whl size=125059 sha256=d509d06748a7633145e91191d620ea14fa29d7bd4bcf061d54333416ee5ab504 2023-11-24T08:41:37,381 Stored in directory: /tmp/pip-ephem-wheel-cache-fq9wv9ag/wheels/48/25/e4/d8dde082896dfb4074416c7d660d5d4d89c23d723820d65cc9 2023-11-24T08:41:37,393 Successfully built mhubio 2023-11-24T08:41:37,399 Removed build tracker: '/tmp/pip-build-tracker-x6yz0f9o'