2023-11-24T18:21:49,958 Created temporary directory: /tmp/pip-build-tracker-xqzapaz1 2023-11-24T18:21:49,959 Initialized build tracking at /tmp/pip-build-tracker-xqzapaz1 2023-11-24T18:21:49,959 Created build tracker: /tmp/pip-build-tracker-xqzapaz1 2023-11-24T18:21:49,960 Entered build tracker: /tmp/pip-build-tracker-xqzapaz1 2023-11-24T18:21:49,960 Created temporary directory: /tmp/pip-wheel-1pm4pl38 2023-11-24T18:21:49,963 Created temporary directory: /tmp/pip-ephem-wheel-cache-cd5s6ga4 2023-11-24T18:21:49,985 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-24T18:21:49,989 2 location(s) to search for versions of rnaglib: 2023-11-24T18:21:49,989 * https://pypi.org/simple/rnaglib/ 2023-11-24T18:21:49,989 * https://www.piwheels.org/simple/rnaglib/ 2023-11-24T18:21:49,990 Fetching project page and analyzing links: https://pypi.org/simple/rnaglib/ 2023-11-24T18:21:49,990 Getting page https://pypi.org/simple/rnaglib/ 2023-11-24T18:21:49,992 Found index url https://pypi.org/simple/ 2023-11-24T18:21:50,141 Fetched page https://pypi.org/simple/rnaglib/ as application/vnd.pypi.simple.v1+json 2023-11-24T18:21:50,147 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/a3/f8/38f3ce999f666541abdfed01d71e23c9c918a6b2442d8c88d2d1739930ee/rnaglib-0.0.1-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-24T18:21:50,148 Found link https://files.pythonhosted.org/packages/dc/5d/6e58f6b44267f40696ff7c00daa3a3da57d775144c89150a317e2135afc3/rnaglib-0.0.1.tar.gz (from https://pypi.org/simple/rnaglib/), version: 0.0.1 2023-11-24T18:21:50,149 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/3f/95/0eb19bfc8e420eafc60439ce97e0b64a65a86931fa4badbc4320248c6a30/rnaglib-0.0.2-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-24T18:21:50,149 Found link https://files.pythonhosted.org/packages/25/1c/e32ca46f4e9302dc39ef0f1af0c297583f2144c1dae53327969fd92fbc44/rnaglib-0.0.2.tar.gz (from https://pypi.org/simple/rnaglib/), version: 0.0.2 2023-11-24T18:21:50,150 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/f2/45/7a988b90a2652da74a9115ee713f2693549d80846b2d689af61f1a3ff021/rnaglib-1.0.0-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-24T18:21:50,150 Found link https://files.pythonhosted.org/packages/82/08/ba03a1be69536eae29e70494cbfe34f52a62b75817651012df2277ca9292/rnaglib-1.0.0.tar.gz (from https://pypi.org/simple/rnaglib/), version: 1.0.0 2023-11-24T18:21:50,151 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/3b/de/cf795a08ed80a36dde6632ff30dae32f1e1fad7d3c95c876ec23370b8273/rnaglib-1.0.1-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-24T18:21:50,152 Found link https://files.pythonhosted.org/packages/24/19/9074f7b9bee68f1e962d87b1c632104cdd29f678f67d439bb31cc2661248/rnaglib-1.0.1.tar.gz (from https://pypi.org/simple/rnaglib/), version: 1.0.1 2023-11-24T18:21:50,153 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/90/b3/853f199e5fde9eaec168e992020a1bce30d3a06e62115481f98b8fdcbcd9/rnaglib-2.0.0-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-24T18:21:50,153 Found link https://files.pythonhosted.org/packages/5f/e9/5fc4a056a08b619c3ee40c387a391b06091476574ba7d90c3c1b8a5177db/rnaglib-2.0.0.tar.gz (from https://pypi.org/simple/rnaglib/), version: 2.0.0 2023-11-24T18:21:50,154 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/43/d3/5e0fc72bfa33ce35533aa8edda4401af573b98912857cf8a9076aba9ad5a/rnaglib-2.0.1-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-24T18:21:50,154 Found link https://files.pythonhosted.org/packages/59/b3/8b34d8832c4fc0dddca78c03cf0d8d3891d2dd8fcdc170ace0fc0a875d8b/rnaglib-2.0.1.tar.gz (from https://pypi.org/simple/rnaglib/), version: 2.0.1 2023-11-24T18:21:50,155 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/68/64/7770020a366076609f9555899a81619670cc96061078950b4052faf8935b/rnaglib-2.0.2-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-24T18:21:50,156 Found link https://files.pythonhosted.org/packages/70/6f/3391d572ad802a6e9e1466b1c9033871612e275299fad4f9ab86fadb88a3/rnaglib-2.0.2.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.2 2023-11-24T18:21:50,157 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/18/d4/e74fa266504f52d9dbac5a38b70db78bd5532be3d3adf10c6bc2e6fb51c8/rnaglib-2.0.3-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-24T18:21:50,158 Found link https://files.pythonhosted.org/packages/24/be/8d19b3b3ee32030b5733b64397e0bf86097b1d745c73fecfc94f791575cb/rnaglib-2.0.3.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.3 2023-11-24T18:21:50,158 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/6d/87/18f1b7349605bf131bd801440ddd97f472b0f12d5a102342c69dd90be7e3/rnaglib-2.0.4-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-24T18:21:50,159 Found link https://files.pythonhosted.org/packages/c0/37/ef1804644facc42ba2c86e0d0466308558fbb547de7b67ed507ab4deaa23/rnaglib-2.0.4.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.4 2023-11-24T18:21:50,160 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/a3/4f/68597d04b4c599f134e38e8dfdb12294a879f5c9c10889f79cfbdd88e0ae/rnaglib-2.0.6-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-24T18:21:50,160 Found link https://files.pythonhosted.org/packages/c8/b9/62da4eff3d4d17a656229340dc63635302e6b8575971ce1a0815eed6d7a0/rnaglib-2.0.6.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.6 2023-11-24T18:21:50,161 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/56/3b/9a81ef23778fc4181524f62f8d8f2901625797854d1d8bced2e92e9a2c9d/rnaglib-2.0.7-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-24T18:21:50,162 Found link https://files.pythonhosted.org/packages/e7/83/ec0ec023dcc6787b88c43334509fa57e3edbbe1609298fac25381208b0ef/rnaglib-2.0.7.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.7 2023-11-24T18:21:50,163 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/e3/5b/a5df91ca5ad58aedd933e491fa96d2feedc7604ae77ffad06ab806435c06/rnaglib-2.0.8-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-24T18:21:50,164 Found link https://files.pythonhosted.org/packages/92/96/6760c80c6e11b073952145bdc4b0c69f04fca09929526654434c3a184643/rnaglib-2.0.8.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.8 2023-11-24T18:21:50,165 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/8f/73/b082eac738c41ac2626a919c829fe5091610fb223de8641089da1be32f0c/rnaglib-2.0.9-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-24T18:21:50,165 Found link https://files.pythonhosted.org/packages/77/4f/99ea1241115b91a230a2ff434ca7616e683f6fa23a944d1045de08d0b760/rnaglib-2.0.9.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.9 2023-11-24T18:21:50,166 Fetching project page and analyzing links: https://www.piwheels.org/simple/rnaglib/ 2023-11-24T18:21:50,167 Getting page https://www.piwheels.org/simple/rnaglib/ 2023-11-24T18:21:50,168 Found index url https://www.piwheels.org/simple/ 2023-11-24T18:21:50,335 Fetched page https://www.piwheels.org/simple/rnaglib/ as text/html 2023-11-24T18:21:50,337 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.2-py3-none-any.whl#sha256=0200e766f0b13b06d5f898d066818c081ed09e01571d92ed7b4912218787fcf6 (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-24T18:21:50,338 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-1.0.1-py3-none-any.whl#sha256=5bd782ad43e7ba033b27aa10741b1aa27caff30ebf3fb145e5963c08abf03ee0 (from https://www.piwheels.org/simple/rnaglib/) 2023-11-24T18:21:50,339 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-1.0.0-py3-none-any.whl#sha256=861b765850bd13bb510b7bcc3ede3c666e18f27e796615e0f01503004ccc96af (from https://www.piwheels.org/simple/rnaglib/) 2023-11-24T18:21:50,339 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-0.0.2-py3-none-any.whl#sha256=c5e80decfdd04be4b6881b2f0cde78d932ef4cf48ded91720de2b1523cc85f89 (from https://www.piwheels.org/simple/rnaglib/) 2023-11-24T18:21:50,340 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-0.0.1-py3-none-any.whl#sha256=235f6b82380c2ca6a517fb7049ef71765872fa9024a92f4bca53b1d5af3342a6 (from https://www.piwheels.org/simple/rnaglib/) 2023-11-24T18:21:50,340 Skipping link: not a file: https://www.piwheels.org/simple/rnaglib/ 2023-11-24T18:21:50,341 Skipping link: not a file: https://pypi.org/simple/rnaglib/ 2023-11-24T18:21:50,362 Given no hashes to check 1 links for project 'rnaglib': discarding no candidates 2023-11-24T18:21:50,381 Collecting rnaglib==2.0.3 2023-11-24T18:21:50,383 Created temporary directory: /tmp/pip-unpack-womc_u5m 2023-11-24T18:21:50,603 Downloading rnaglib-2.0.3.tar.gz (123 kB) 2023-11-24T18:21:50,814 Added rnaglib==2.0.3 from https://files.pythonhosted.org/packages/24/be/8d19b3b3ee32030b5733b64397e0bf86097b1d745c73fecfc94f791575cb/rnaglib-2.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-xqzapaz1' 2023-11-24T18:21:50,820 Created temporary directory: /tmp/pip-build-env-811bnk1u 2023-11-24T18:21:50,824 Installing build dependencies: started 2023-11-24T18:21:50,825 Running command pip subprocess to install build dependencies 2023-11-24T18:21:51,963 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-11-24T18:21:52,452 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-24T18:21:54,046 Collecting setuptools>=40.8.0 2023-11-24T18:21:54,047 Obtaining dependency information for setuptools>=40.8.0 from https://files.pythonhosted.org/packages/bb/e1/ed2dd0850446b8697ad28d118df885ad04140c64ace06c4bd559f7c8a94f/setuptools-69.0.2-py3-none-any.whl.metadata 2023-11-24T18:21:54,053 Using cached setuptools-69.0.2-py3-none-any.whl.metadata (6.3 kB) 2023-11-24T18:21:54,273 Collecting wheel 2023-11-24T18:21:54,290 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.3-py3-none-any.whl (65 kB) 2023-11-24T18:21:54,469 Using cached setuptools-69.0.2-py3-none-any.whl (819 kB) 2023-11-24T18:21:56,927 Installing collected packages: wheel, setuptools 2023-11-24T18:21:57,148 Creating /tmp/pip-build-env-811bnk1u/overlay/local/bin 2023-11-24T18:21:57,150 changing mode of /tmp/pip-build-env-811bnk1u/overlay/local/bin/wheel to 755 2023-11-24T18:21:59,386 Successfully installed setuptools-69.0.2 wheel-0.41.3 2023-11-24T18:21:59,667 [notice] A new release of pip is available: 23.2.1 -> 23.3.1 2023-11-24T18:21:59,668 [notice] To update, run: python3 -m pip install --upgrade pip 2023-11-24T18:21:59,939 Installing build dependencies: finished with status 'done' 2023-11-24T18:21:59,942 Getting requirements to build wheel: started 2023-11-24T18:21:59,944 Running command Getting requirements to build wheel 2023-11-24T18:22:00,748 running egg_info 2023-11-24T18:22:00,753 writing rnaglib.egg-info/PKG-INFO 2023-11-24T18:22:00,756 writing dependency_links to rnaglib.egg-info/dependency_links.txt 2023-11-24T18:22:00,758 writing entry points to rnaglib.egg-info/entry_points.txt 2023-11-24T18:22:00,759 writing requirements to rnaglib.egg-info/requires.txt 2023-11-24T18:22:00,761 writing top-level names to rnaglib.egg-info/top_level.txt 2023-11-24T18:22:00,790 reading manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-24T18:22:00,794 adding license file 'LICENSE' 2023-11-24T18:22:00,797 writing manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-24T18:22:00,915 Getting requirements to build wheel: finished with status 'done' 2023-11-24T18:22:00,924 Created temporary directory: /tmp/pip-modern-metadata-4kuvlxqn 2023-11-24T18:22:00,926 Preparing metadata (pyproject.toml): started 2023-11-24T18:22:00,927 Running command Preparing metadata (pyproject.toml) 2023-11-24T18:22:01,689 running dist_info 2023-11-24T18:22:01,695 creating /tmp/pip-modern-metadata-4kuvlxqn/rnaglib.egg-info 2023-11-24T18:22:01,699 writing /tmp/pip-modern-metadata-4kuvlxqn/rnaglib.egg-info/PKG-INFO 2023-11-24T18:22:01,702 writing dependency_links to /tmp/pip-modern-metadata-4kuvlxqn/rnaglib.egg-info/dependency_links.txt 2023-11-24T18:22:01,704 writing entry points to /tmp/pip-modern-metadata-4kuvlxqn/rnaglib.egg-info/entry_points.txt 2023-11-24T18:22:01,706 writing requirements to /tmp/pip-modern-metadata-4kuvlxqn/rnaglib.egg-info/requires.txt 2023-11-24T18:22:01,707 writing top-level names to /tmp/pip-modern-metadata-4kuvlxqn/rnaglib.egg-info/top_level.txt 2023-11-24T18:22:01,708 writing manifest file '/tmp/pip-modern-metadata-4kuvlxqn/rnaglib.egg-info/SOURCES.txt' 2023-11-24T18:22:01,731 reading manifest file '/tmp/pip-modern-metadata-4kuvlxqn/rnaglib.egg-info/SOURCES.txt' 2023-11-24T18:22:01,733 adding license file 'LICENSE' 2023-11-24T18:22:01,736 writing manifest file '/tmp/pip-modern-metadata-4kuvlxqn/rnaglib.egg-info/SOURCES.txt' 2023-11-24T18:22:01,737 creating '/tmp/pip-modern-metadata-4kuvlxqn/rnaglib-2.0.3.dist-info' 2023-11-24T18:22:01,889 Preparing metadata (pyproject.toml): finished with status 'done' 2023-11-24T18:22:01,894 Source in /tmp/pip-wheel-1pm4pl38/rnaglib_b64018f45a4a4f79ab2b913e319667d8 has version 2.0.3, which satisfies requirement rnaglib==2.0.3 from https://files.pythonhosted.org/packages/24/be/8d19b3b3ee32030b5733b64397e0bf86097b1d745c73fecfc94f791575cb/rnaglib-2.0.3.tar.gz 2023-11-24T18:22:01,895 Removed rnaglib==2.0.3 from https://files.pythonhosted.org/packages/24/be/8d19b3b3ee32030b5733b64397e0bf86097b1d745c73fecfc94f791575cb/rnaglib-2.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-xqzapaz1' 2023-11-24T18:22:01,900 Created temporary directory: /tmp/pip-unpack-tqepappm 2023-11-24T18:22:01,901 Created temporary directory: /tmp/pip-unpack-55xtrs0d 2023-11-24T18:22:01,912 Building wheels for collected packages: rnaglib 2023-11-24T18:22:01,916 Created temporary directory: /tmp/pip-wheel-l07m7lip 2023-11-24T18:22:01,917 Destination directory: /tmp/pip-wheel-l07m7lip 2023-11-24T18:22:01,919 Building wheel for rnaglib (pyproject.toml): started 2023-11-24T18:22:01,920 Running command Building wheel for rnaglib (pyproject.toml) 2023-11-24T18:22:02,673 running bdist_wheel 2023-11-24T18:22:02,692 running build 2023-11-24T18:22:02,693 running build_py 2023-11-24T18:22:02,697 creating build 2023-11-24T18:22:02,698 creating build/lib 2023-11-24T18:22:02,699 creating build/lib/rnaglib 2023-11-24T18:22:02,700 copying rnaglib/__init__.py -> build/lib/rnaglib 2023-11-24T18:22:02,702 creating build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,703 copying rnaglib/prepare_data/fr3d_2_graphs.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,706 copying rnaglib/prepare_data/__init__.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,707 copying rnaglib/prepare_data/filters.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,709 copying rnaglib/prepare_data/main.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,711 copying rnaglib/prepare_data/dssr_2_graphs.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,713 copying rnaglib/prepare_data/annotations.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,716 copying rnaglib/prepare_data/chopper.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,718 copying rnaglib/prepare_data/test.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,720 copying rnaglib/prepare_data/describe_datasets.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,721 copying rnaglib/prepare_data/khop_annotate.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,724 copying rnaglib/prepare_data/hash_check.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,725 copying rnaglib/prepare_data/retrieve_structures.py -> build/lib/rnaglib/prepare_data 2023-11-24T18:22:02,727 creating build/lib/rnaglib/data_loading 2023-11-24T18:22:02,728 copying rnaglib/data_loading/feature_maps.py -> build/lib/rnaglib/data_loading 2023-11-24T18:22:02,730 copying rnaglib/data_loading/__init__.py -> build/lib/rnaglib/data_loading 2023-11-24T18:22:02,732 copying rnaglib/data_loading/rna_loader.py -> build/lib/rnaglib/data_loading 2023-11-24T18:22:02,735 copying rnaglib/data_loading/get_statistics.py -> build/lib/rnaglib/data_loading 2023-11-24T18:22:02,736 copying rnaglib/data_loading/test.py -> build/lib/rnaglib/data_loading 2023-11-24T18:22:02,738 copying rnaglib/data_loading/rna_dataset.py -> build/lib/rnaglib/data_loading 2023-11-24T18:22:02,740 copying rnaglib/data_loading/splitting.py -> build/lib/rnaglib/data_loading 2023-11-24T18:22:02,743 creating build/lib/rnaglib/representations 2023-11-24T18:22:02,744 copying rnaglib/representations/rings.py -> build/lib/rnaglib/representations 2023-11-24T18:22:02,746 copying rnaglib/representations/__init__.py -> build/lib/rnaglib/representations 2023-11-24T18:22:02,747 copying rnaglib/representations/representation.py -> build/lib/rnaglib/representations 2023-11-24T18:22:02,749 copying rnaglib/representations/point_cloud.py -> build/lib/rnaglib/representations 2023-11-24T18:22:02,751 copying rnaglib/representations/voxel.py -> build/lib/rnaglib/representations 2023-11-24T18:22:02,753 copying rnaglib/representations/graph.py -> build/lib/rnaglib/representations 2023-11-24T18:22:02,755 creating build/lib/rnaglib/drawing 2023-11-24T18:22:02,756 copying rnaglib/drawing/__init__.py -> build/lib/rnaglib/drawing 2023-11-24T18:22:02,758 copying rnaglib/drawing/rna_draw.py -> build/lib/rnaglib/drawing 2023-11-24T18:22:02,760 copying rnaglib/drawing/rna_layout.py -> build/lib/rnaglib/drawing 2023-11-24T18:22:02,762 creating build/lib/rnaglib/ged 2023-11-24T18:22:02,763 copying rnaglib/ged/rna_ged_nx.py -> build/lib/rnaglib/ged 2023-11-24T18:22:02,765 copying rnaglib/ged/__init__.py -> build/lib/rnaglib/ged 2023-11-24T18:22:02,767 copying rnaglib/ged/ged_nx.py -> build/lib/rnaglib/ged 2023-11-24T18:22:02,770 creating build/lib/rnaglib/kernels 2023-11-24T18:22:02,771 copying rnaglib/kernels/__init__.py -> build/lib/rnaglib/kernels 2023-11-24T18:22:02,772 copying rnaglib/kernels/node_sim.py -> build/lib/rnaglib/kernels 2023-11-24T18:22:02,775 creating build/lib/rnaglib/learning 2023-11-24T18:22:02,776 copying rnaglib/learning/__init__.py -> build/lib/rnaglib/learning 2023-11-24T18:22:02,778 copying rnaglib/learning/models.py -> build/lib/rnaglib/learning 2023-11-24T18:22:02,780 copying rnaglib/learning/learning_utils.py -> build/lib/rnaglib/learning 2023-11-24T18:22:02,782 copying rnaglib/learning/learn.py -> build/lib/rnaglib/learning 2023-11-24T18:22:02,785 creating build/lib/rnaglib/utils 2023-11-24T18:22:02,786 copying rnaglib/utils/feature_maps.py -> build/lib/rnaglib/utils 2023-11-24T18:22:02,788 copying rnaglib/utils/__init__.py -> build/lib/rnaglib/utils 2023-11-24T18:22:02,790 copying rnaglib/utils/misc.py -> build/lib/rnaglib/utils 2023-11-24T18:22:02,792 copying rnaglib/utils/graph_io.py -> build/lib/rnaglib/utils 2023-11-24T18:22:02,794 copying rnaglib/utils/graph_utils.py -> build/lib/rnaglib/utils 2023-11-24T18:22:02,797 copying rnaglib/utils/chemical.py -> build/lib/rnaglib/utils 2023-11-24T18:22:02,799 copying rnaglib/utils/graphlet_hash.py -> build/lib/rnaglib/utils 2023-11-24T18:22:02,801 creating build/lib/rnaglib/config 2023-11-24T18:22:02,802 copying rnaglib/config/graph_keys.py -> build/lib/rnaglib/config 2023-11-24T18:22:02,804 copying rnaglib/config/__init__.py -> build/lib/rnaglib/config 2023-11-24T18:22:02,806 copying rnaglib/config/ligands.py -> build/lib/rnaglib/config 2023-11-24T18:22:02,807 copying rnaglib/config/build_iso_mat.py -> build/lib/rnaglib/config 2023-11-24T18:22:02,809 running egg_info 2023-11-24T18:22:02,814 writing rnaglib.egg-info/PKG-INFO 2023-11-24T18:22:02,816 writing dependency_links to rnaglib.egg-info/dependency_links.txt 2023-11-24T18:22:02,818 writing entry points to rnaglib.egg-info/entry_points.txt 2023-11-24T18:22:02,819 writing requirements to rnaglib.egg-info/requires.txt 2023-11-24T18:22:02,820 writing top-level names to rnaglib.egg-info/top_level.txt 2023-11-24T18:22:02,835 reading manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-24T18:22:02,838 adding license file 'LICENSE' 2023-11-24T18:22:02,842 writing manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-24T18:22:02,844 /tmp/pip-build-env-811bnk1u/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'rnaglib.bin' is absent from the `packages` configuration. 2023-11-24T18:22:02,844 !! 2023-11-24T18:22:02,845 ******************************************************************************** 2023-11-24T18:22:02,845 ############################ 2023-11-24T18:22:02,846 # Package would be ignored # 2023-11-24T18:22:02,846 ############################ 2023-11-24T18:22:02,847 Python recognizes 'rnaglib.bin' as an importable package[^1], 2023-11-24T18:22:02,847 but it is absent from setuptools' `packages` configuration. 2023-11-24T18:22:02,848 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-24T18:22:02,849 package, please make sure that 'rnaglib.bin' is explicitly added 2023-11-24T18:22:02,849 to the `packages` configuration field. 2023-11-24T18:22:02,850 Alternatively, you can also rely on setuptools' discovery methods 2023-11-24T18:22:02,851 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-24T18:22:02,851 instead of `find_packages(...)`/`find:`). 2023-11-24T18:22:02,852 You can read more about "package discovery" on setuptools documentation page: 2023-11-24T18:22:02,853 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-24T18:22:02,854 If you don't want 'rnaglib.bin' to be distributed and are 2023-11-24T18:22:02,854 already explicitly excluding 'rnaglib.bin' via 2023-11-24T18:22:02,855 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-24T18:22:02,855 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-24T18:22:02,856 combination with a more fine grained `package-data` configuration. 2023-11-24T18:22:02,857 You can read more about "package data files" on setuptools documentation page: 2023-11-24T18:22:02,857 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-24T18:22:02,859 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-24T18:22:02,860 even if it does not contain any `.py` files. 2023-11-24T18:22:02,860 On the other hand, currently there is no concept of package data 2023-11-24T18:22:02,861 directory, all directories are treated like packages. 2023-11-24T18:22:02,861 ******************************************************************************** 2023-11-24T18:22:02,862 !! 2023-11-24T18:22:02,863 check.warn(importable) 2023-11-24T18:22:02,863 /tmp/pip-build-env-811bnk1u/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'rnaglib.data' is absent from the `packages` configuration. 2023-11-24T18:22:02,864 !! 2023-11-24T18:22:02,865 ******************************************************************************** 2023-11-24T18:22:02,865 ############################ 2023-11-24T18:22:02,866 # Package would be ignored # 2023-11-24T18:22:02,866 ############################ 2023-11-24T18:22:02,867 Python recognizes 'rnaglib.data' as an importable package[^1], 2023-11-24T18:22:02,867 but it is absent from setuptools' `packages` configuration. 2023-11-24T18:22:02,868 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-24T18:22:02,868 package, please make sure that 'rnaglib.data' is explicitly added 2023-11-24T18:22:02,869 to the `packages` configuration field. 2023-11-24T18:22:02,870 Alternatively, you can also rely on setuptools' discovery methods 2023-11-24T18:22:02,870 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-24T18:22:02,871 instead of `find_packages(...)`/`find:`). 2023-11-24T18:22:02,871 You can read more about "package discovery" on setuptools documentation page: 2023-11-24T18:22:02,872 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-24T18:22:02,874 If you don't want 'rnaglib.data' to be distributed and are 2023-11-24T18:22:02,874 already explicitly excluding 'rnaglib.data' via 2023-11-24T18:22:02,875 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-24T18:22:02,875 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-24T18:22:02,876 combination with a more fine grained `package-data` configuration. 2023-11-24T18:22:02,876 You can read more about "package data files" on setuptools documentation page: 2023-11-24T18:22:02,878 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-24T18:22:02,880 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-24T18:22:02,881 even if it does not contain any `.py` files. 2023-11-24T18:22:02,881 On the other hand, currently there is no concept of package data 2023-11-24T18:22:02,882 directory, all directories are treated like packages. 2023-11-24T18:22:02,882 ******************************************************************************** 2023-11-24T18:22:02,883 !! 2023-11-24T18:22:02,884 check.warn(importable) 2023-11-24T18:22:02,884 /tmp/pip-build-env-811bnk1u/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'rnaglib.examples' is absent from the `packages` configuration. 2023-11-24T18:22:02,885 !! 2023-11-24T18:22:02,886 ******************************************************************************** 2023-11-24T18:22:02,886 ############################ 2023-11-24T18:22:02,887 # Package would be ignored # 2023-11-24T18:22:02,887 ############################ 2023-11-24T18:22:02,888 Python recognizes 'rnaglib.examples' as an importable package[^1], 2023-11-24T18:22:02,888 but it is absent from setuptools' `packages` configuration. 2023-11-24T18:22:02,889 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-24T18:22:02,890 package, please make sure that 'rnaglib.examples' is explicitly added 2023-11-24T18:22:02,891 to the `packages` configuration field. 2023-11-24T18:22:02,892 Alternatively, you can also rely on setuptools' discovery methods 2023-11-24T18:22:02,892 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-24T18:22:02,893 instead of `find_packages(...)`/`find:`). 2023-11-24T18:22:02,894 You can read more about "package discovery" on setuptools documentation page: 2023-11-24T18:22:02,895 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-24T18:22:02,896 If you don't want 'rnaglib.examples' to be distributed and are 2023-11-24T18:22:02,897 already explicitly excluding 'rnaglib.examples' via 2023-11-24T18:22:02,898 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-24T18:22:02,898 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-24T18:22:02,898 combination with a more fine grained `package-data` configuration. 2023-11-24T18:22:02,899 You can read more about "package data files" on setuptools documentation page: 2023-11-24T18:22:02,900 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-24T18:22:02,901 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-24T18:22:02,902 even if it does not contain any `.py` files. 2023-11-24T18:22:02,902 On the other hand, currently there is no concept of package data 2023-11-24T18:22:02,902 directory, all directories are treated like packages. 2023-11-24T18:22:02,903 ******************************************************************************** 2023-11-24T18:22:02,904 !! 2023-11-24T18:22:02,904 check.warn(importable) 2023-11-24T18:22:02,905 creating build/lib/rnaglib/bin 2023-11-24T18:22:02,905 copying rnaglib/bin/rnaglib_download -> build/lib/rnaglib/bin 2023-11-24T18:22:02,906 copying rnaglib/bin/rnaglib_prepare_data -> build/lib/rnaglib/bin 2023-11-24T18:22:02,906 copying rnaglib/bin/rnaglib_tokenize -> build/lib/rnaglib/bin 2023-11-24T18:22:02,907 creating build/lib/rnaglib/data 2023-11-24T18:22:02,907 copying rnaglib/data/__init__.py -> build/lib/rnaglib/data 2023-11-24T18:22:02,908 creating build/lib/rnaglib/examples 2023-11-24T18:22:02,908 copying rnaglib/examples/__init__.py -> build/lib/rnaglib/examples 2023-11-24T18:22:02,909 copying rnaglib/examples/rnaglib_first -> build/lib/rnaglib/examples 2023-11-24T18:22:02,909 copying rnaglib/examples/rnaglib_second -> build/lib/rnaglib/examples 2023-11-24T18:22:02,909 copying rnaglib/data_loading/graph_index_NR.json -> build/lib/rnaglib/data_loading 2023-11-24T18:22:02,910 copying rnaglib/config/rna_smiles.txt -> build/lib/rnaglib/config 2023-11-24T18:22:02,910 installing to build/bdist.linux-armv7l/wheel 2023-11-24T18:22:02,911 running install 2023-11-24T18:22:02,927 running install_lib 2023-11-24T18:22:02,932 creating build/bdist.linux-armv7l 2023-11-24T18:22:02,933 creating build/bdist.linux-armv7l/wheel 2023-11-24T18:22:02,934 creating build/bdist.linux-armv7l/wheel/rnaglib 2023-11-24T18:22:02,936 creating build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-24T18:22:02,937 copying build/lib/rnaglib/utils/feature_maps.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-24T18:22:02,940 copying build/lib/rnaglib/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-24T18:22:02,942 copying build/lib/rnaglib/utils/misc.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-24T18:22:02,944 copying build/lib/rnaglib/utils/graph_io.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-24T18:22:02,946 copying build/lib/rnaglib/utils/graph_utils.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-24T18:22:02,949 copying build/lib/rnaglib/utils/chemical.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-24T18:22:02,951 copying build/lib/rnaglib/utils/graphlet_hash.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-24T18:22:02,953 creating build/bdist.linux-armv7l/wheel/rnaglib/examples 2023-11-24T18:22:02,954 copying build/lib/rnaglib/examples/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/examples 2023-11-24T18:22:02,956 copying build/lib/rnaglib/examples/rnaglib_first -> build/bdist.linux-armv7l/wheel/rnaglib/examples 2023-11-24T18:22:02,958 copying build/lib/rnaglib/examples/rnaglib_second -> build/bdist.linux-armv7l/wheel/rnaglib/examples 2023-11-24T18:22:02,960 creating build/bdist.linux-armv7l/wheel/rnaglib/bin 2023-11-24T18:22:02,961 copying build/lib/rnaglib/bin/rnaglib_download -> build/bdist.linux-armv7l/wheel/rnaglib/bin 2023-11-24T18:22:02,963 copying build/lib/rnaglib/bin/rnaglib_tokenize -> build/bdist.linux-armv7l/wheel/rnaglib/bin 2023-11-24T18:22:02,965 copying build/lib/rnaglib/bin/rnaglib_prepare_data -> build/bdist.linux-armv7l/wheel/rnaglib/bin 2023-11-24T18:22:02,967 creating build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-24T18:22:02,968 copying build/lib/rnaglib/representations/rings.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-24T18:22:02,970 copying build/lib/rnaglib/representations/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-24T18:22:02,971 copying build/lib/rnaglib/representations/representation.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-24T18:22:02,973 copying build/lib/rnaglib/representations/point_cloud.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-24T18:22:02,975 copying build/lib/rnaglib/representations/voxel.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-24T18:22:02,977 copying build/lib/rnaglib/representations/graph.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-24T18:22:02,979 copying build/lib/rnaglib/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib 2023-11-24T18:22:02,980 creating build/bdist.linux-armv7l/wheel/rnaglib/kernels 2023-11-24T18:22:02,981 copying build/lib/rnaglib/kernels/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/kernels 2023-11-24T18:22:02,983 copying build/lib/rnaglib/kernels/node_sim.py -> build/bdist.linux-armv7l/wheel/rnaglib/kernels 2023-11-24T18:22:02,986 creating build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-24T18:22:02,987 copying build/lib/rnaglib/config/graph_keys.py -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-24T18:22:02,989 copying build/lib/rnaglib/config/rna_smiles.txt -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-24T18:22:02,992 copying build/lib/rnaglib/config/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-24T18:22:02,994 copying build/lib/rnaglib/config/ligands.py -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-24T18:22:02,995 copying build/lib/rnaglib/config/build_iso_mat.py -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-24T18:22:02,998 creating build/bdist.linux-armv7l/wheel/rnaglib/data 2023-11-24T18:22:02,999 copying build/lib/rnaglib/data/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/data 2023-11-24T18:22:03,001 creating build/bdist.linux-armv7l/wheel/rnaglib/drawing 2023-11-24T18:22:03,002 copying build/lib/rnaglib/drawing/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/drawing 2023-11-24T18:22:03,004 copying build/lib/rnaglib/drawing/rna_draw.py -> build/bdist.linux-armv7l/wheel/rnaglib/drawing 2023-11-24T18:22:03,006 copying build/lib/rnaglib/drawing/rna_layout.py -> build/bdist.linux-armv7l/wheel/rnaglib/drawing 2023-11-24T18:22:03,009 creating build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,010 copying build/lib/rnaglib/prepare_data/fr3d_2_graphs.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,013 copying build/lib/rnaglib/prepare_data/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,014 copying build/lib/rnaglib/prepare_data/filters.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,016 copying build/lib/rnaglib/prepare_data/main.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,019 copying build/lib/rnaglib/prepare_data/dssr_2_graphs.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,021 copying build/lib/rnaglib/prepare_data/annotations.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,023 copying build/lib/rnaglib/prepare_data/chopper.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,026 copying build/lib/rnaglib/prepare_data/test.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,027 copying build/lib/rnaglib/prepare_data/describe_datasets.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,029 copying build/lib/rnaglib/prepare_data/khop_annotate.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,032 copying build/lib/rnaglib/prepare_data/hash_check.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,033 copying build/lib/rnaglib/prepare_data/retrieve_structures.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-24T18:22:03,035 creating build/bdist.linux-armv7l/wheel/rnaglib/ged 2023-11-24T18:22:03,036 copying build/lib/rnaglib/ged/rna_ged_nx.py -> build/bdist.linux-armv7l/wheel/rnaglib/ged 2023-11-24T18:22:03,038 copying build/lib/rnaglib/ged/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/ged 2023-11-24T18:22:03,040 copying build/lib/rnaglib/ged/ged_nx.py -> build/bdist.linux-armv7l/wheel/rnaglib/ged 2023-11-24T18:22:03,043 creating build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-24T18:22:03,044 copying build/lib/rnaglib/data_loading/feature_maps.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-24T18:22:03,046 copying build/lib/rnaglib/data_loading/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-24T18:22:03,048 copying build/lib/rnaglib/data_loading/rna_loader.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-24T18:22:03,050 copying build/lib/rnaglib/data_loading/get_statistics.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-24T18:22:03,053 copying build/lib/rnaglib/data_loading/test.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-24T18:22:03,054 copying build/lib/rnaglib/data_loading/graph_index_NR.json -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-24T18:22:03,058 copying build/lib/rnaglib/data_loading/rna_dataset.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-24T18:22:03,060 copying build/lib/rnaglib/data_loading/splitting.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-24T18:22:03,063 creating build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-24T18:22:03,064 copying build/lib/rnaglib/learning/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-24T18:22:03,065 copying build/lib/rnaglib/learning/models.py -> build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-24T18:22:03,068 copying build/lib/rnaglib/learning/learning_utils.py -> build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-24T18:22:03,070 copying build/lib/rnaglib/learning/learn.py -> build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-24T18:22:03,072 running install_egg_info 2023-11-24T18:22:03,077 Copying rnaglib.egg-info to build/bdist.linux-armv7l/wheel/rnaglib-2.0.3-py3.11.egg-info 2023-11-24T18:22:03,088 running install_scripts 2023-11-24T18:22:03,104 creating build/bdist.linux-armv7l/wheel/rnaglib-2.0.3.dist-info/WHEEL 2023-11-24T18:22:03,106 creating '/tmp/pip-wheel-l07m7lip/.tmp-pmcl7fk7/rnaglib-2.0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-24T18:22:03,109 adding 'rnaglib/__init__.py' 2023-11-24T18:22:03,111 adding 'rnaglib/bin/rnaglib_download' 2023-11-24T18:22:03,112 adding 'rnaglib/bin/rnaglib_prepare_data' 2023-11-24T18:22:03,113 adding 'rnaglib/bin/rnaglib_tokenize' 2023-11-24T18:22:03,115 adding 'rnaglib/config/__init__.py' 2023-11-24T18:22:03,117 adding 'rnaglib/config/build_iso_mat.py' 2023-11-24T18:22:03,118 adding 'rnaglib/config/graph_keys.py' 2023-11-24T18:22:03,120 adding 'rnaglib/config/ligands.py' 2023-11-24T18:22:03,126 adding 'rnaglib/config/rna_smiles.txt' 2023-11-24T18:22:03,129 adding 'rnaglib/data/__init__.py' 2023-11-24T18:22:03,130 adding 'rnaglib/data_loading/__init__.py' 2023-11-24T18:22:03,132 adding 'rnaglib/data_loading/feature_maps.py' 2023-11-24T18:22:03,134 adding 'rnaglib/data_loading/get_statistics.py' 2023-11-24T18:22:03,150 adding 'rnaglib/data_loading/graph_index_NR.json' 2023-11-24T18:22:03,153 adding 'rnaglib/data_loading/rna_dataset.py' 2023-11-24T18:22:03,155 adding 'rnaglib/data_loading/rna_loader.py' 2023-11-24T18:22:03,156 adding 'rnaglib/data_loading/splitting.py' 2023-11-24T18:22:03,158 adding 'rnaglib/data_loading/test.py' 2023-11-24T18:22:03,159 adding 'rnaglib/drawing/__init__.py' 2023-11-24T18:22:03,161 adding 'rnaglib/drawing/rna_draw.py' 2023-11-24T18:22:03,162 adding 'rnaglib/drawing/rna_layout.py' 2023-11-24T18:22:03,164 adding 'rnaglib/examples/__init__.py' 2023-11-24T18:22:03,165 adding 'rnaglib/examples/rnaglib_first' 2023-11-24T18:22:03,166 adding 'rnaglib/examples/rnaglib_second' 2023-11-24T18:22:03,168 adding 'rnaglib/ged/__init__.py' 2023-11-24T18:22:03,173 adding 'rnaglib/ged/ged_nx.py' 2023-11-24T18:22:03,175 adding 'rnaglib/ged/rna_ged_nx.py' 2023-11-24T18:22:03,176 adding 'rnaglib/kernels/__init__.py' 2023-11-24T18:22:03,180 adding 'rnaglib/kernels/node_sim.py' 2023-11-24T18:22:03,182 adding 'rnaglib/learning/__init__.py' 2023-11-24T18:22:03,183 adding 'rnaglib/learning/learn.py' 2023-11-24T18:22:03,186 adding 'rnaglib/learning/learning_utils.py' 2023-11-24T18:22:03,188 adding 'rnaglib/learning/models.py' 2023-11-24T18:22:03,189 adding 'rnaglib/prepare_data/__init__.py' 2023-11-24T18:22:03,191 adding 'rnaglib/prepare_data/annotations.py' 2023-11-24T18:22:03,193 adding 'rnaglib/prepare_data/chopper.py' 2023-11-24T18:22:03,194 adding 'rnaglib/prepare_data/describe_datasets.py' 2023-11-24T18:22:03,196 adding 'rnaglib/prepare_data/dssr_2_graphs.py' 2023-11-24T18:22:03,197 adding 'rnaglib/prepare_data/filters.py' 2023-11-24T18:22:03,199 adding 'rnaglib/prepare_data/fr3d_2_graphs.py' 2023-11-24T18:22:03,200 adding 'rnaglib/prepare_data/hash_check.py' 2023-11-24T18:22:03,201 adding 'rnaglib/prepare_data/khop_annotate.py' 2023-11-24T18:22:03,203 adding 'rnaglib/prepare_data/main.py' 2023-11-24T18:22:03,204 adding 'rnaglib/prepare_data/retrieve_structures.py' 2023-11-24T18:22:03,205 adding 'rnaglib/prepare_data/test.py' 2023-11-24T18:22:03,207 adding 'rnaglib/representations/__init__.py' 2023-11-24T18:22:03,208 adding 'rnaglib/representations/graph.py' 2023-11-24T18:22:03,210 adding 'rnaglib/representations/point_cloud.py' 2023-11-24T18:22:03,211 adding 'rnaglib/representations/representation.py' 2023-11-24T18:22:03,212 adding 'rnaglib/representations/rings.py' 2023-11-24T18:22:03,214 adding 'rnaglib/representations/voxel.py' 2023-11-24T18:22:03,216 adding 'rnaglib/utils/__init__.py' 2023-11-24T18:22:03,217 adding 'rnaglib/utils/chemical.py' 2023-11-24T18:22:03,219 adding 'rnaglib/utils/feature_maps.py' 2023-11-24T18:22:03,221 adding 'rnaglib/utils/graph_io.py' 2023-11-24T18:22:03,224 adding 'rnaglib/utils/graph_utils.py' 2023-11-24T18:22:03,226 adding 'rnaglib/utils/graphlet_hash.py' 2023-11-24T18:22:03,228 adding 'rnaglib/utils/misc.py' 2023-11-24T18:22:03,230 adding 'rnaglib-2.0.3.dist-info/LICENSE' 2023-11-24T18:22:03,231 adding 'rnaglib-2.0.3.dist-info/METADATA' 2023-11-24T18:22:03,232 adding 'rnaglib-2.0.3.dist-info/WHEEL' 2023-11-24T18:22:03,233 adding 'rnaglib-2.0.3.dist-info/entry_points.txt' 2023-11-24T18:22:03,234 adding 'rnaglib-2.0.3.dist-info/top_level.txt' 2023-11-24T18:22:03,236 adding 'rnaglib-2.0.3.dist-info/RECORD' 2023-11-24T18:22:03,239 removing build/bdist.linux-armv7l/wheel 2023-11-24T18:22:03,377 Building wheel for rnaglib (pyproject.toml): finished with status 'done' 2023-11-24T18:22:03,385 Created wheel for rnaglib: filename=rnaglib-2.0.3-py3-none-any.whl size=139115 sha256=8c5ff31897de6ca54cbd58cfe31bf04474c23d0fb50b119b62200e9c2f65b605 2023-11-24T18:22:03,386 Stored in directory: /tmp/pip-ephem-wheel-cache-cd5s6ga4/wheels/86/18/83/556e115498210d3200131daad72f1d365190df15b81590146a 2023-11-24T18:22:03,399 Successfully built rnaglib 2023-11-24T18:22:03,405 Removed build tracker: '/tmp/pip-build-tracker-xqzapaz1'