2023-11-25T01:35:37,323 Created temporary directory: /tmp/pip-build-tracker-uhezkb7g 2023-11-25T01:35:37,324 Initialized build tracking at /tmp/pip-build-tracker-uhezkb7g 2023-11-25T01:35:37,325 Created build tracker: /tmp/pip-build-tracker-uhezkb7g 2023-11-25T01:35:37,325 Entered build tracker: /tmp/pip-build-tracker-uhezkb7g 2023-11-25T01:35:37,326 Created temporary directory: /tmp/pip-wheel-vz0orv97 2023-11-25T01:35:37,329 Created temporary directory: /tmp/pip-ephem-wheel-cache-2qzyuyas 2023-11-25T01:35:37,350 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-25T01:35:37,354 2 location(s) to search for versions of rnaglib: 2023-11-25T01:35:37,354 * https://pypi.org/simple/rnaglib/ 2023-11-25T01:35:37,354 * https://www.piwheels.org/simple/rnaglib/ 2023-11-25T01:35:37,354 Fetching project page and analyzing links: https://pypi.org/simple/rnaglib/ 2023-11-25T01:35:37,355 Getting page https://pypi.org/simple/rnaglib/ 2023-11-25T01:35:37,357 Found index url https://pypi.org/simple/ 2023-11-25T01:35:37,496 Fetched page https://pypi.org/simple/rnaglib/ as application/vnd.pypi.simple.v1+json 2023-11-25T01:35:37,501 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/a3/f8/38f3ce999f666541abdfed01d71e23c9c918a6b2442d8c88d2d1739930ee/rnaglib-0.0.1-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-25T01:35:37,502 Found link https://files.pythonhosted.org/packages/dc/5d/6e58f6b44267f40696ff7c00daa3a3da57d775144c89150a317e2135afc3/rnaglib-0.0.1.tar.gz (from https://pypi.org/simple/rnaglib/), version: 0.0.1 2023-11-25T01:35:37,503 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/3f/95/0eb19bfc8e420eafc60439ce97e0b64a65a86931fa4badbc4320248c6a30/rnaglib-0.0.2-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-25T01:35:37,503 Found link https://files.pythonhosted.org/packages/25/1c/e32ca46f4e9302dc39ef0f1af0c297583f2144c1dae53327969fd92fbc44/rnaglib-0.0.2.tar.gz (from https://pypi.org/simple/rnaglib/), version: 0.0.2 2023-11-25T01:35:37,504 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/f2/45/7a988b90a2652da74a9115ee713f2693549d80846b2d689af61f1a3ff021/rnaglib-1.0.0-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-25T01:35:37,505 Found link https://files.pythonhosted.org/packages/82/08/ba03a1be69536eae29e70494cbfe34f52a62b75817651012df2277ca9292/rnaglib-1.0.0.tar.gz (from https://pypi.org/simple/rnaglib/), version: 1.0.0 2023-11-25T01:35:37,505 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/3b/de/cf795a08ed80a36dde6632ff30dae32f1e1fad7d3c95c876ec23370b8273/rnaglib-1.0.1-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-25T01:35:37,506 Found link https://files.pythonhosted.org/packages/24/19/9074f7b9bee68f1e962d87b1c632104cdd29f678f67d439bb31cc2661248/rnaglib-1.0.1.tar.gz (from https://pypi.org/simple/rnaglib/), version: 1.0.1 2023-11-25T01:35:37,507 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/90/b3/853f199e5fde9eaec168e992020a1bce30d3a06e62115481f98b8fdcbcd9/rnaglib-2.0.0-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-25T01:35:37,507 Found link https://files.pythonhosted.org/packages/5f/e9/5fc4a056a08b619c3ee40c387a391b06091476574ba7d90c3c1b8a5177db/rnaglib-2.0.0.tar.gz (from https://pypi.org/simple/rnaglib/), version: 2.0.0 2023-11-25T01:35:37,508 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/43/d3/5e0fc72bfa33ce35533aa8edda4401af573b98912857cf8a9076aba9ad5a/rnaglib-2.0.1-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-25T01:35:37,509 Found link 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2023-11-25T01:35:37,512 Found link https://files.pythonhosted.org/packages/24/be/8d19b3b3ee32030b5733b64397e0bf86097b1d745c73fecfc94f791575cb/rnaglib-2.0.3.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.3 2023-11-25T01:35:37,513 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/6d/87/18f1b7349605bf131bd801440ddd97f472b0f12d5a102342c69dd90be7e3/rnaglib-2.0.4-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-25T01:35:37,513 Found link https://files.pythonhosted.org/packages/c0/37/ef1804644facc42ba2c86e0d0466308558fbb547de7b67ed507ab4deaa23/rnaglib-2.0.4.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.4 2023-11-25T01:35:37,514 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/a3/4f/68597d04b4c599f134e38e8dfdb12294a879f5c9c10889f79cfbdd88e0ae/rnaglib-2.0.6-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-25T01:35:37,515 Found link https://files.pythonhosted.org/packages/c8/b9/62da4eff3d4d17a656229340dc63635302e6b8575971ce1a0815eed6d7a0/rnaglib-2.0.6.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.6 2023-11-25T01:35:37,515 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/56/3b/9a81ef23778fc4181524f62f8d8f2901625797854d1d8bced2e92e9a2c9d/rnaglib-2.0.7-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-25T01:35:37,516 Found link https://files.pythonhosted.org/packages/e7/83/ec0ec023dcc6787b88c43334509fa57e3edbbe1609298fac25381208b0ef/rnaglib-2.0.7.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.7 2023-11-25T01:35:37,517 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/e3/5b/a5df91ca5ad58aedd933e491fa96d2feedc7604ae77ffad06ab806435c06/rnaglib-2.0.8-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-25T01:35:37,518 Found link https://files.pythonhosted.org/packages/92/96/6760c80c6e11b073952145bdc4b0c69f04fca09929526654434c3a184643/rnaglib-2.0.8.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.8 2023-11-25T01:35:37,519 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/8f/73/b082eac738c41ac2626a919c829fe5091610fb223de8641089da1be32f0c/rnaglib-2.0.9-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-25T01:35:37,520 Found link https://files.pythonhosted.org/packages/77/4f/99ea1241115b91a230a2ff434ca7616e683f6fa23a944d1045de08d0b760/rnaglib-2.0.9.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.9 2023-11-25T01:35:37,521 Fetching project page and analyzing links: https://www.piwheels.org/simple/rnaglib/ 2023-11-25T01:35:37,521 Getting page https://www.piwheels.org/simple/rnaglib/ 2023-11-25T01:35:37,523 Found index url https://www.piwheels.org/simple/ 2023-11-25T01:35:37,685 Fetched page https://www.piwheels.org/simple/rnaglib/ as text/html 2023-11-25T01:35:37,688 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.6-py3-none-any.whl#sha256=f8e2b6853a8467b419e10ed76c56d685b1c0843c4b0a0cce305ba14bc43dacbd (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-25T01:35:37,689 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.4-py3-none-any.whl#sha256=d45a2ecd66fef0e722389a9793e9cbb54c5293dc89bedfc4b263abe9d2647018 (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-25T01:35:37,690 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.3-py3-none-any.whl#sha256=8c5ff31897de6ca54cbd58cfe31bf04474c23d0fb50b119b62200e9c2f65b605 (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-25T01:35:37,690 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.2-py3-none-any.whl#sha256=0200e766f0b13b06d5f898d066818c081ed09e01571d92ed7b4912218787fcf6 (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-25T01:35:37,690 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-1.0.1-py3-none-any.whl#sha256=5bd782ad43e7ba033b27aa10741b1aa27caff30ebf3fb145e5963c08abf03ee0 (from https://www.piwheels.org/simple/rnaglib/) 2023-11-25T01:35:37,691 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-1.0.0-py3-none-any.whl#sha256=861b765850bd13bb510b7bcc3ede3c666e18f27e796615e0f01503004ccc96af (from https://www.piwheels.org/simple/rnaglib/) 2023-11-25T01:35:37,691 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-0.0.2-py3-none-any.whl#sha256=c5e80decfdd04be4b6881b2f0cde78d932ef4cf48ded91720de2b1523cc85f89 (from https://www.piwheels.org/simple/rnaglib/) 2023-11-25T01:35:37,692 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-0.0.1-py3-none-any.whl#sha256=235f6b82380c2ca6a517fb7049ef71765872fa9024a92f4bca53b1d5af3342a6 (from https://www.piwheels.org/simple/rnaglib/) 2023-11-25T01:35:37,692 Skipping link: not a file: https://www.piwheels.org/simple/rnaglib/ 2023-11-25T01:35:37,693 Skipping link: not a file: https://pypi.org/simple/rnaglib/ 2023-11-25T01:35:37,713 Given no hashes to check 1 links for project 'rnaglib': discarding no candidates 2023-11-25T01:35:37,731 Collecting rnaglib==2.0.7 2023-11-25T01:35:37,733 Created temporary directory: /tmp/pip-unpack-hczrxmzy 2023-11-25T01:35:38,033 Downloading rnaglib-2.0.7.tar.gz (121 kB) 2023-11-25T01:35:38,226 Added rnaglib==2.0.7 from https://files.pythonhosted.org/packages/e7/83/ec0ec023dcc6787b88c43334509fa57e3edbbe1609298fac25381208b0ef/rnaglib-2.0.7.tar.gz to build tracker '/tmp/pip-build-tracker-uhezkb7g' 2023-11-25T01:35:38,231 Created temporary directory: /tmp/pip-build-env-1yqb6i8h 2023-11-25T01:35:38,236 Installing build dependencies: started 2023-11-25T01:35:38,237 Running command pip subprocess to install build dependencies 2023-11-25T01:35:39,421 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-11-25T01:35:39,908 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-25T01:35:41,362 Collecting setuptools>=40.8.0 2023-11-25T01:35:41,364 Obtaining dependency information for setuptools>=40.8.0 from https://files.pythonhosted.org/packages/bb/e1/ed2dd0850446b8697ad28d118df885ad04140c64ace06c4bd559f7c8a94f/setuptools-69.0.2-py3-none-any.whl.metadata 2023-11-25T01:35:41,370 Using cached setuptools-69.0.2-py3-none-any.whl.metadata (6.3 kB) 2023-11-25T01:35:41,572 Collecting wheel 2023-11-25T01:35:41,586 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.3-py3-none-any.whl (65 kB) 2023-11-25T01:35:41,751 Using cached setuptools-69.0.2-py3-none-any.whl (819 kB) 2023-11-25T01:35:44,214 Installing collected packages: wheel, setuptools 2023-11-25T01:35:44,440 Creating /tmp/pip-build-env-1yqb6i8h/overlay/local/bin 2023-11-25T01:35:44,442 changing mode of /tmp/pip-build-env-1yqb6i8h/overlay/local/bin/wheel to 755 2023-11-25T01:35:46,738 Successfully installed setuptools-69.0.2 wheel-0.41.3 2023-11-25T01:35:47,317 Installing build dependencies: finished with status 'done' 2023-11-25T01:35:47,321 Getting requirements to build wheel: started 2023-11-25T01:35:47,322 Running command Getting requirements to build wheel 2023-11-25T01:35:48,377 running egg_info 2023-11-25T01:35:48,382 writing rnaglib.egg-info/PKG-INFO 2023-11-25T01:35:48,385 writing dependency_links to rnaglib.egg-info/dependency_links.txt 2023-11-25T01:35:48,387 writing entry points to rnaglib.egg-info/entry_points.txt 2023-11-25T01:35:48,388 writing requirements to rnaglib.egg-info/requires.txt 2023-11-25T01:35:48,390 writing top-level names to rnaglib.egg-info/top_level.txt 2023-11-25T01:35:48,419 reading manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-25T01:35:48,422 adding license file 'LICENSE' 2023-11-25T01:35:48,426 writing manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-25T01:35:48,544 Getting requirements to build wheel: finished with status 'done' 2023-11-25T01:35:48,555 Created temporary directory: /tmp/pip-modern-metadata-qbw2dqjx 2023-11-25T01:35:48,557 Preparing metadata (pyproject.toml): started 2023-11-25T01:35:48,558 Running command Preparing metadata (pyproject.toml) 2023-11-25T01:35:49,318 running dist_info 2023-11-25T01:35:49,324 creating /tmp/pip-modern-metadata-qbw2dqjx/rnaglib.egg-info 2023-11-25T01:35:49,328 writing /tmp/pip-modern-metadata-qbw2dqjx/rnaglib.egg-info/PKG-INFO 2023-11-25T01:35:49,332 writing dependency_links to /tmp/pip-modern-metadata-qbw2dqjx/rnaglib.egg-info/dependency_links.txt 2023-11-25T01:35:49,334 writing entry points to /tmp/pip-modern-metadata-qbw2dqjx/rnaglib.egg-info/entry_points.txt 2023-11-25T01:35:49,335 writing requirements to /tmp/pip-modern-metadata-qbw2dqjx/rnaglib.egg-info/requires.txt 2023-11-25T01:35:49,336 writing top-level names to /tmp/pip-modern-metadata-qbw2dqjx/rnaglib.egg-info/top_level.txt 2023-11-25T01:35:49,337 writing manifest file '/tmp/pip-modern-metadata-qbw2dqjx/rnaglib.egg-info/SOURCES.txt' 2023-11-25T01:35:49,361 reading manifest file '/tmp/pip-modern-metadata-qbw2dqjx/rnaglib.egg-info/SOURCES.txt' 2023-11-25T01:35:49,363 adding license file 'LICENSE' 2023-11-25T01:35:49,366 writing manifest file '/tmp/pip-modern-metadata-qbw2dqjx/rnaglib.egg-info/SOURCES.txt' 2023-11-25T01:35:49,367 creating '/tmp/pip-modern-metadata-qbw2dqjx/rnaglib-2.0.7.dist-info' 2023-11-25T01:35:49,519 Preparing metadata (pyproject.toml): finished with status 'done' 2023-11-25T01:35:49,524 Source in /tmp/pip-wheel-vz0orv97/rnaglib_f8510f53bc7b4019904b24931ea9456c has version 2.0.7, which satisfies requirement rnaglib==2.0.7 from https://files.pythonhosted.org/packages/e7/83/ec0ec023dcc6787b88c43334509fa57e3edbbe1609298fac25381208b0ef/rnaglib-2.0.7.tar.gz 2023-11-25T01:35:49,525 Removed rnaglib==2.0.7 from https://files.pythonhosted.org/packages/e7/83/ec0ec023dcc6787b88c43334509fa57e3edbbe1609298fac25381208b0ef/rnaglib-2.0.7.tar.gz from build tracker '/tmp/pip-build-tracker-uhezkb7g' 2023-11-25T01:35:49,530 Created temporary directory: /tmp/pip-unpack-yo3aioiz 2023-11-25T01:35:49,531 Created temporary directory: /tmp/pip-unpack-gu4llcjm 2023-11-25T01:35:49,542 Building wheels for collected packages: rnaglib 2023-11-25T01:35:49,546 Created temporary directory: /tmp/pip-wheel-w5j_i63j 2023-11-25T01:35:49,547 Destination directory: /tmp/pip-wheel-w5j_i63j 2023-11-25T01:35:49,549 Building wheel for rnaglib (pyproject.toml): started 2023-11-25T01:35:49,550 Running command Building wheel for rnaglib (pyproject.toml) 2023-11-25T01:35:50,507 running bdist_wheel 2023-11-25T01:35:50,526 running build 2023-11-25T01:35:50,527 running build_py 2023-11-25T01:35:50,532 creating build 2023-11-25T01:35:50,532 creating build/lib 2023-11-25T01:35:50,533 creating build/lib/rnaglib 2023-11-25T01:35:50,534 copying rnaglib/__init__.py -> build/lib/rnaglib 2023-11-25T01:35:50,536 creating build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,537 copying rnaglib/prepare_data/main.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,540 copying rnaglib/prepare_data/chopper.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,542 copying rnaglib/prepare_data/fr3d_2_graphs.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,545 copying rnaglib/prepare_data/describe_datasets.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,546 copying rnaglib/prepare_data/filters.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,548 copying rnaglib/prepare_data/test.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,550 copying rnaglib/prepare_data/retrieve_structures.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,551 copying rnaglib/prepare_data/dssr_2_graphs.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,553 copying rnaglib/prepare_data/khop_annotate.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,555 copying rnaglib/prepare_data/annotations.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,558 copying rnaglib/prepare_data/__init__.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,559 copying rnaglib/prepare_data/hash_check.py -> build/lib/rnaglib/prepare_data 2023-11-25T01:35:50,562 creating build/lib/rnaglib/data_loading 2023-11-25T01:35:50,562 copying rnaglib/data_loading/splitting.py -> build/lib/rnaglib/data_loading 2023-11-25T01:35:50,565 copying rnaglib/data_loading/rna_loader.py -> build/lib/rnaglib/data_loading 2023-11-25T01:35:50,567 copying rnaglib/data_loading/rna_dataset.py -> build/lib/rnaglib/data_loading 2023-11-25T01:35:50,570 copying rnaglib/data_loading/test.py -> build/lib/rnaglib/data_loading 2023-11-25T01:35:50,572 copying rnaglib/data_loading/feature_maps.py -> build/lib/rnaglib/data_loading 2023-11-25T01:35:50,574 copying rnaglib/data_loading/get_statistics.py -> build/lib/rnaglib/data_loading 2023-11-25T01:35:50,577 copying rnaglib/data_loading/__init__.py -> build/lib/rnaglib/data_loading 2023-11-25T01:35:50,579 creating build/lib/rnaglib/representations 2023-11-25T01:35:50,580 copying rnaglib/representations/graph.py -> build/lib/rnaglib/representations 2023-11-25T01:35:50,582 copying rnaglib/representations/point_cloud.py -> build/lib/rnaglib/representations 2023-11-25T01:35:50,583 copying rnaglib/representations/representation.py -> build/lib/rnaglib/representations 2023-11-25T01:35:50,585 copying rnaglib/representations/rings.py -> build/lib/rnaglib/representations 2023-11-25T01:35:50,587 copying rnaglib/representations/voxel.py -> build/lib/rnaglib/representations 2023-11-25T01:35:50,589 copying rnaglib/representations/__init__.py -> build/lib/rnaglib/representations 2023-11-25T01:35:50,591 creating build/lib/rnaglib/drawing 2023-11-25T01:35:50,592 copying rnaglib/drawing/rna_draw.py -> build/lib/rnaglib/drawing 2023-11-25T01:35:50,594 copying rnaglib/drawing/rna_layout.py -> build/lib/rnaglib/drawing 2023-11-25T01:35:50,596 copying rnaglib/drawing/__init__.py -> build/lib/rnaglib/drawing 2023-11-25T01:35:50,598 creating build/lib/rnaglib/ged 2023-11-25T01:35:50,599 copying rnaglib/ged/rna_ged_nx.py -> build/lib/rnaglib/ged 2023-11-25T01:35:50,601 copying rnaglib/ged/__init__.py -> build/lib/rnaglib/ged 2023-11-25T01:35:50,603 copying rnaglib/ged/ged_nx.py -> build/lib/rnaglib/ged 2023-11-25T01:35:50,607 creating build/lib/rnaglib/kernels 2023-11-25T01:35:50,608 copying rnaglib/kernels/__init__.py -> build/lib/rnaglib/kernels 2023-11-25T01:35:50,610 copying rnaglib/kernels/node_sim.py -> build/lib/rnaglib/kernels 2023-11-25T01:35:50,613 creating build/lib/rnaglib/learning 2023-11-25T01:35:50,614 copying rnaglib/learning/learn.py -> build/lib/rnaglib/learning 2023-11-25T01:35:50,617 copying rnaglib/learning/models.py -> build/lib/rnaglib/learning 2023-11-25T01:35:50,619 copying rnaglib/learning/learning_utils.py -> build/lib/rnaglib/learning 2023-11-25T01:35:50,621 copying rnaglib/learning/__init__.py -> build/lib/rnaglib/learning 2023-11-25T01:35:50,623 creating build/lib/rnaglib/utils 2023-11-25T01:35:50,624 copying rnaglib/utils/graphlet_hash.py -> build/lib/rnaglib/utils 2023-11-25T01:35:50,626 copying rnaglib/utils/misc.py -> build/lib/rnaglib/utils 2023-11-25T01:35:50,628 copying rnaglib/utils/feature_maps.py -> build/lib/rnaglib/utils 2023-11-25T01:35:50,631 copying rnaglib/utils/__init__.py -> build/lib/rnaglib/utils 2023-11-25T01:35:50,632 copying rnaglib/utils/graph_io.py -> build/lib/rnaglib/utils 2023-11-25T01:35:50,634 copying rnaglib/utils/graph_utils.py -> build/lib/rnaglib/utils 2023-11-25T01:35:50,637 creating build/lib/rnaglib/config 2023-11-25T01:35:50,638 copying rnaglib/config/build_iso_mat.py -> build/lib/rnaglib/config 2023-11-25T01:35:50,640 copying rnaglib/config/graph_keys.py -> build/lib/rnaglib/config 2023-11-25T01:35:50,642 copying rnaglib/config/__init__.py -> build/lib/rnaglib/config 2023-11-25T01:35:50,643 copying rnaglib/config/ligands.py -> build/lib/rnaglib/config 2023-11-25T01:35:50,645 running egg_info 2023-11-25T01:35:50,649 writing rnaglib.egg-info/PKG-INFO 2023-11-25T01:35:50,652 writing dependency_links to rnaglib.egg-info/dependency_links.txt 2023-11-25T01:35:50,654 writing entry points to rnaglib.egg-info/entry_points.txt 2023-11-25T01:35:50,655 writing requirements to rnaglib.egg-info/requires.txt 2023-11-25T01:35:50,656 writing top-level names to rnaglib.egg-info/top_level.txt 2023-11-25T01:35:50,671 reading manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-25T01:35:50,674 adding license file 'LICENSE' 2023-11-25T01:35:50,678 writing manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-25T01:35:50,684 copying rnaglib/data_loading/graph_index_NR.json -> build/lib/rnaglib/data_loading 2023-11-25T01:35:50,688 copying rnaglib/config/rna_smiles.txt -> build/lib/rnaglib/config 2023-11-25T01:35:50,704 installing to build/bdist.linux-armv7l/wheel 2023-11-25T01:35:50,705 running install 2023-11-25T01:35:50,728 running install_lib 2023-11-25T01:35:50,733 creating build/bdist.linux-armv7l 2023-11-25T01:35:50,734 creating build/bdist.linux-armv7l/wheel 2023-11-25T01:35:50,735 creating build/bdist.linux-armv7l/wheel/rnaglib 2023-11-25T01:35:50,737 creating build/bdist.linux-armv7l/wheel/rnaglib/kernels 2023-11-25T01:35:50,738 copying build/lib/rnaglib/kernels/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/kernels 2023-11-25T01:35:50,740 copying build/lib/rnaglib/kernels/node_sim.py -> build/bdist.linux-armv7l/wheel/rnaglib/kernels 2023-11-25T01:35:50,743 creating build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-25T01:35:50,744 copying build/lib/rnaglib/representations/graph.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-25T01:35:50,746 copying build/lib/rnaglib/representations/point_cloud.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-25T01:35:50,748 copying build/lib/rnaglib/representations/representation.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-25T01:35:50,750 copying build/lib/rnaglib/representations/rings.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-25T01:35:50,752 copying build/lib/rnaglib/representations/voxel.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-25T01:35:50,754 copying build/lib/rnaglib/representations/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/representations 2023-11-25T01:35:50,757 creating build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-25T01:35:50,758 copying build/lib/rnaglib/utils/graphlet_hash.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-25T01:35:50,761 copying build/lib/rnaglib/utils/misc.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-25T01:35:50,763 copying build/lib/rnaglib/utils/feature_maps.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-25T01:35:50,765 copying build/lib/rnaglib/utils/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-25T01:35:50,767 copying build/lib/rnaglib/utils/graph_io.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-25T01:35:50,770 copying build/lib/rnaglib/utils/graph_utils.py -> build/bdist.linux-armv7l/wheel/rnaglib/utils 2023-11-25T01:35:50,773 creating build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-25T01:35:50,774 copying build/lib/rnaglib/learning/learn.py -> build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-25T01:35:50,777 copying build/lib/rnaglib/learning/models.py -> build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-25T01:35:50,779 copying build/lib/rnaglib/learning/learning_utils.py -> build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-25T01:35:50,781 copying build/lib/rnaglib/learning/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/learning 2023-11-25T01:35:50,783 creating build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-25T01:35:50,784 copying build/lib/rnaglib/data_loading/splitting.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-25T01:35:50,786 copying build/lib/rnaglib/data_loading/rna_loader.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-25T01:35:50,788 copying build/lib/rnaglib/data_loading/rna_dataset.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-25T01:35:50,790 copying build/lib/rnaglib/data_loading/test.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-25T01:35:50,792 copying build/lib/rnaglib/data_loading/feature_maps.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-25T01:35:50,794 copying build/lib/rnaglib/data_loading/graph_index_NR.json -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-25T01:35:50,798 copying build/lib/rnaglib/data_loading/get_statistics.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-25T01:35:50,800 copying build/lib/rnaglib/data_loading/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/data_loading 2023-11-25T01:35:50,802 creating build/bdist.linux-armv7l/wheel/rnaglib/drawing 2023-11-25T01:35:50,803 copying build/lib/rnaglib/drawing/rna_draw.py -> build/bdist.linux-armv7l/wheel/rnaglib/drawing 2023-11-25T01:35:50,805 copying build/lib/rnaglib/drawing/rna_layout.py -> build/bdist.linux-armv7l/wheel/rnaglib/drawing 2023-11-25T01:35:50,807 copying build/lib/rnaglib/drawing/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/drawing 2023-11-25T01:35:50,809 copying build/lib/rnaglib/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib 2023-11-25T01:35:50,811 creating build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,811 copying build/lib/rnaglib/prepare_data/main.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,814 copying build/lib/rnaglib/prepare_data/chopper.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,816 copying build/lib/rnaglib/prepare_data/fr3d_2_graphs.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,818 copying build/lib/rnaglib/prepare_data/describe_datasets.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,820 copying build/lib/rnaglib/prepare_data/filters.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,822 copying build/lib/rnaglib/prepare_data/test.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,823 copying build/lib/rnaglib/prepare_data/retrieve_structures.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,825 copying build/lib/rnaglib/prepare_data/dssr_2_graphs.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,827 copying build/lib/rnaglib/prepare_data/khop_annotate.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,830 copying build/lib/rnaglib/prepare_data/annotations.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,832 copying build/lib/rnaglib/prepare_data/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,833 copying build/lib/rnaglib/prepare_data/hash_check.py -> build/bdist.linux-armv7l/wheel/rnaglib/prepare_data 2023-11-25T01:35:50,836 creating build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-25T01:35:50,837 copying build/lib/rnaglib/config/build_iso_mat.py -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-25T01:35:50,839 copying build/lib/rnaglib/config/graph_keys.py -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-25T01:35:50,840 copying build/lib/rnaglib/config/rna_smiles.txt -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-25T01:35:50,843 copying build/lib/rnaglib/config/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-25T01:35:50,845 copying build/lib/rnaglib/config/ligands.py -> build/bdist.linux-armv7l/wheel/rnaglib/config 2023-11-25T01:35:50,847 creating build/bdist.linux-armv7l/wheel/rnaglib/ged 2023-11-25T01:35:50,848 copying build/lib/rnaglib/ged/rna_ged_nx.py -> build/bdist.linux-armv7l/wheel/rnaglib/ged 2023-11-25T01:35:50,850 copying build/lib/rnaglib/ged/__init__.py -> build/bdist.linux-armv7l/wheel/rnaglib/ged 2023-11-25T01:35:50,851 copying build/lib/rnaglib/ged/ged_nx.py -> build/bdist.linux-armv7l/wheel/rnaglib/ged 2023-11-25T01:35:50,854 running install_egg_info 2023-11-25T01:35:50,859 Copying rnaglib.egg-info to build/bdist.linux-armv7l/wheel/rnaglib-2.0.7-py3.11.egg-info 2023-11-25T01:35:50,870 running install_scripts 2023-11-25T01:35:50,885 creating build/bdist.linux-armv7l/wheel/rnaglib-2.0.7.dist-info/WHEEL 2023-11-25T01:35:50,888 creating '/tmp/pip-wheel-w5j_i63j/.tmp-p74o6v4h/rnaglib-2.0.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-25T01:35:50,890 adding 'rnaglib/__init__.py' 2023-11-25T01:35:50,892 adding 'rnaglib/config/__init__.py' 2023-11-25T01:35:50,893 adding 'rnaglib/config/build_iso_mat.py' 2023-11-25T01:35:50,894 adding 'rnaglib/config/graph_keys.py' 2023-11-25T01:35:50,896 adding 'rnaglib/config/ligands.py' 2023-11-25T01:35:50,902 adding 'rnaglib/config/rna_smiles.txt' 2023-11-25T01:35:50,904 adding 'rnaglib/data_loading/__init__.py' 2023-11-25T01:35:50,907 adding 'rnaglib/data_loading/feature_maps.py' 2023-11-25T01:35:50,908 adding 'rnaglib/data_loading/get_statistics.py' 2023-11-25T01:35:50,923 adding 'rnaglib/data_loading/graph_index_NR.json' 2023-11-25T01:35:50,926 adding 'rnaglib/data_loading/rna_dataset.py' 2023-11-25T01:35:50,928 adding 'rnaglib/data_loading/rna_loader.py' 2023-11-25T01:35:50,929 adding 'rnaglib/data_loading/splitting.py' 2023-11-25T01:35:50,931 adding 'rnaglib/data_loading/test.py' 2023-11-25T01:35:50,932 adding 'rnaglib/drawing/__init__.py' 2023-11-25T01:35:50,934 adding 'rnaglib/drawing/rna_draw.py' 2023-11-25T01:35:50,936 adding 'rnaglib/drawing/rna_layout.py' 2023-11-25T01:35:50,937 adding 'rnaglib/ged/__init__.py' 2023-11-25T01:35:50,942 adding 'rnaglib/ged/ged_nx.py' 2023-11-25T01:35:50,944 adding 'rnaglib/ged/rna_ged_nx.py' 2023-11-25T01:35:50,946 adding 'rnaglib/kernels/__init__.py' 2023-11-25T01:35:50,949 adding 'rnaglib/kernels/node_sim.py' 2023-11-25T01:35:50,951 adding 'rnaglib/learning/__init__.py' 2023-11-25T01:35:50,953 adding 'rnaglib/learning/learn.py' 2023-11-25T01:35:50,955 adding 'rnaglib/learning/learning_utils.py' 2023-11-25T01:35:50,956 adding 'rnaglib/learning/models.py' 2023-11-25T01:35:50,958 adding 'rnaglib/prepare_data/__init__.py' 2023-11-25T01:35:50,960 adding 'rnaglib/prepare_data/annotations.py' 2023-11-25T01:35:50,961 adding 'rnaglib/prepare_data/chopper.py' 2023-11-25T01:35:50,963 adding 'rnaglib/prepare_data/describe_datasets.py' 2023-11-25T01:35:50,965 adding 'rnaglib/prepare_data/dssr_2_graphs.py' 2023-11-25T01:35:50,966 adding 'rnaglib/prepare_data/filters.py' 2023-11-25T01:35:50,968 adding 'rnaglib/prepare_data/fr3d_2_graphs.py' 2023-11-25T01:35:50,969 adding 'rnaglib/prepare_data/hash_check.py' 2023-11-25T01:35:50,971 adding 'rnaglib/prepare_data/khop_annotate.py' 2023-11-25T01:35:50,972 adding 'rnaglib/prepare_data/main.py' 2023-11-25T01:35:50,974 adding 'rnaglib/prepare_data/retrieve_structures.py' 2023-11-25T01:35:50,975 adding 'rnaglib/prepare_data/test.py' 2023-11-25T01:35:50,976 adding 'rnaglib/representations/__init__.py' 2023-11-25T01:35:50,978 adding 'rnaglib/representations/graph.py' 2023-11-25T01:35:50,979 adding 'rnaglib/representations/point_cloud.py' 2023-11-25T01:35:50,980 adding 'rnaglib/representations/representation.py' 2023-11-25T01:35:50,982 adding 'rnaglib/representations/rings.py' 2023-11-25T01:35:50,983 adding 'rnaglib/representations/voxel.py' 2023-11-25T01:35:50,985 adding 'rnaglib/utils/__init__.py' 2023-11-25T01:35:50,987 adding 'rnaglib/utils/feature_maps.py' 2023-11-25T01:35:50,989 adding 'rnaglib/utils/graph_io.py' 2023-11-25T01:35:50,992 adding 'rnaglib/utils/graph_utils.py' 2023-11-25T01:35:50,994 adding 'rnaglib/utils/graphlet_hash.py' 2023-11-25T01:35:50,995 adding 'rnaglib/utils/misc.py' 2023-11-25T01:35:50,997 adding 'rnaglib-2.0.7.dist-info/LICENSE' 2023-11-25T01:35:50,998 adding 'rnaglib-2.0.7.dist-info/METADATA' 2023-11-25T01:35:50,999 adding 'rnaglib-2.0.7.dist-info/WHEEL' 2023-11-25T01:35:51,000 adding 'rnaglib-2.0.7.dist-info/entry_points.txt' 2023-11-25T01:35:51,001 adding 'rnaglib-2.0.7.dist-info/top_level.txt' 2023-11-25T01:35:51,002 adding 'rnaglib-2.0.7.dist-info/RECORD' 2023-11-25T01:35:51,006 removing build/bdist.linux-armv7l/wheel 2023-11-25T01:35:51,140 Building wheel for rnaglib (pyproject.toml): finished with status 'done' 2023-11-25T01:35:51,148 Created wheel for rnaglib: filename=rnaglib-2.0.7-py3-none-any.whl size=134701 sha256=b474ed56cb2763a4455b34034f3309d43e50054b4dd9e96b870072c9ac1f1f17 2023-11-25T01:35:51,149 Stored in directory: /tmp/pip-ephem-wheel-cache-2qzyuyas/wheels/12/12/c7/8676ed55499efaa92f9bcf9c6fca50ec9d22f16374f4e7754f 2023-11-25T01:35:51,161 Successfully built rnaglib 2023-11-25T01:35:51,168 Removed build tracker: '/tmp/pip-build-tracker-uhezkb7g'