2023-11-25T07:02:48,511 Created temporary directory: /tmp/pip-build-tracker-q1om4v8o 2023-11-25T07:02:48,513 Initialized build tracking at /tmp/pip-build-tracker-q1om4v8o 2023-11-25T07:02:48,513 Created build tracker: /tmp/pip-build-tracker-q1om4v8o 2023-11-25T07:02:48,514 Entered build tracker: /tmp/pip-build-tracker-q1om4v8o 2023-11-25T07:02:48,515 Created temporary directory: /tmp/pip-wheel-wi1k2r91 2023-11-25T07:02:48,518 Created temporary directory: /tmp/pip-ephem-wheel-cache-ytfx4l0t 2023-11-25T07:02:48,543 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-25T07:02:48,547 2 location(s) to search for versions of bioio-bioformats: 2023-11-25T07:02:48,547 * https://pypi.org/simple/bioio-bioformats/ 2023-11-25T07:02:48,547 * https://www.piwheels.org/simple/bioio-bioformats/ 2023-11-25T07:02:48,547 Fetching project page and analyzing links: https://pypi.org/simple/bioio-bioformats/ 2023-11-25T07:02:48,548 Getting page https://pypi.org/simple/bioio-bioformats/ 2023-11-25T07:02:48,550 Found index url https://pypi.org/simple/ 2023-11-25T07:02:48,798 Fetched page https://pypi.org/simple/bioio-bioformats/ as application/vnd.pypi.simple.v1+json 2023-11-25T07:02:48,799 Found link https://files.pythonhosted.org/packages/b4/a9/1460a15f082c731cced8dcbd37a777704f0c755fc503209b14d6fdd2e60f/bioio-bioformats-0.9.0.tar.gz (from https://pypi.org/simple/bioio-bioformats/) (requires-python:>=3.9), version: 0.9.0 2023-11-25T07:02:48,800 Skipping link: No binaries permitted for bioio-bioformats: https://files.pythonhosted.org/packages/7e/36/f4f530be9ba4137df12bf03c07cffa36272456b4580100a051c8f591120b/bioio_bioformats-0.9.0-py3-none-any.whl (from https://pypi.org/simple/bioio-bioformats/) (requires-python:>=3.9) 2023-11-25T07:02:48,801 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioio-bioformats/ 2023-11-25T07:02:48,802 Getting page https://www.piwheels.org/simple/bioio-bioformats/ 2023-11-25T07:02:48,803 Found index url https://www.piwheels.org/simple/ 2023-11-25T07:02:48,975 Fetched page https://www.piwheels.org/simple/bioio-bioformats/ as text/html 2023-11-25T07:02:48,976 Skipping link: not a file: https://www.piwheels.org/simple/bioio-bioformats/ 2023-11-25T07:02:48,977 Skipping link: not a file: https://pypi.org/simple/bioio-bioformats/ 2023-11-25T07:02:48,996 Given no hashes to check 1 links for project 'bioio-bioformats': discarding no candidates 2023-11-25T07:02:49,016 Collecting bioio-bioformats==0.9.0 2023-11-25T07:02:49,019 Created temporary directory: /tmp/pip-unpack-o4y11794 2023-11-25T07:02:49,251 Downloading bioio-bioformats-0.9.0.tar.gz (44 kB) 2023-11-25T07:02:49,369 Added bioio-bioformats==0.9.0 from https://files.pythonhosted.org/packages/b4/a9/1460a15f082c731cced8dcbd37a777704f0c755fc503209b14d6fdd2e60f/bioio-bioformats-0.9.0.tar.gz to build tracker '/tmp/pip-build-tracker-q1om4v8o' 2023-11-25T07:02:49,377 Created temporary directory: /tmp/pip-build-env-revvu2km 2023-11-25T07:02:49,381 Installing build dependencies: started 2023-11-25T07:02:49,383 Running command pip subprocess to install build dependencies 2023-11-25T07:02:50,507 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-11-25T07:02:51,005 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-25T07:02:52,544 Collecting setuptools>=65 2023-11-25T07:02:52,545 Obtaining dependency information for setuptools>=65 from https://files.pythonhosted.org/packages/bb/e1/ed2dd0850446b8697ad28d118df885ad04140c64ace06c4bd559f7c8a94f/setuptools-69.0.2-py3-none-any.whl.metadata 2023-11-25T07:02:52,551 Using cached setuptools-69.0.2-py3-none-any.whl.metadata (6.3 kB) 2023-11-25T07:02:52,759 Collecting wheel 2023-11-25T07:02:52,774 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.3-py3-none-any.whl (65 kB) 2023-11-25T07:02:53,074 Collecting setuptools_scm[toml]>=6.2 2023-11-25T07:02:53,090 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2023-11-25T07:02:53,444 Collecting packaging>=20 (from setuptools_scm[toml]>=6.2) 2023-11-25T07:02:53,462 Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB) 2023-11-25T07:02:53,577 Collecting typing-extensions (from setuptools_scm[toml]>=6.2) 2023-11-25T07:02:53,592 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.8.0-py3-none-any.whl (31 kB) 2023-11-25T07:02:53,664 Using cached setuptools-69.0.2-py3-none-any.whl (819 kB) 2023-11-25T07:02:56,189 Installing collected packages: wheel, typing-extensions, setuptools, packaging, setuptools_scm 2023-11-25T07:02:56,416 Creating /tmp/pip-build-env-revvu2km/overlay/local/bin 2023-11-25T07:02:56,418 changing mode of /tmp/pip-build-env-revvu2km/overlay/local/bin/wheel to 755 2023-11-25T07:02:59,118 Successfully installed packaging-23.2 setuptools-69.0.2 setuptools_scm-8.0.4 typing-extensions-4.8.0 wheel-0.41.3 2023-11-25T07:02:59,386 [notice] A new release of pip is available: 23.2.1 -> 23.3.1 2023-11-25T07:02:59,386 [notice] To update, run: python3 -m pip install --upgrade pip 2023-11-25T07:02:59,676 Installing build dependencies: finished with status 'done' 2023-11-25T07:02:59,680 Getting requirements to build wheel: started 2023-11-25T07:02:59,681 Running command Getting requirements to build wheel 2023-11-25T07:03:00,572 running egg_info 2023-11-25T07:03:00,577 writing bioio_bioformats.egg-info/PKG-INFO 2023-11-25T07:03:00,585 writing dependency_links to bioio_bioformats.egg-info/dependency_links.txt 2023-11-25T07:03:00,587 writing entry points to bioio_bioformats.egg-info/entry_points.txt 2023-11-25T07:03:00,592 writing requirements to bioio_bioformats.egg-info/requires.txt 2023-11-25T07:03:00,593 writing top-level names to bioio_bioformats.egg-info/top_level.txt 2023-11-25T07:03:00,634 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-11-25T07:03:00,638 reading manifest file 'bioio_bioformats.egg-info/SOURCES.txt' 2023-11-25T07:03:00,641 adding license file 'LICENSE' 2023-11-25T07:03:00,644 writing manifest file 'bioio_bioformats.egg-info/SOURCES.txt' 2023-11-25T07:03:00,772 Getting requirements to build wheel: finished with status 'done' 2023-11-25T07:03:00,785 Created temporary directory: /tmp/pip-modern-metadata-5sx51m_f 2023-11-25T07:03:00,787 Preparing metadata (pyproject.toml): started 2023-11-25T07:03:00,788 Running command Preparing metadata (pyproject.toml) 2023-11-25T07:03:01,621 running dist_info 2023-11-25T07:03:01,627 creating /tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats.egg-info 2023-11-25T07:03:01,632 writing /tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats.egg-info/PKG-INFO 2023-11-25T07:03:01,641 writing dependency_links to /tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats.egg-info/dependency_links.txt 2023-11-25T07:03:01,643 writing entry points to /tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats.egg-info/entry_points.txt 2023-11-25T07:03:01,647 writing requirements to /tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats.egg-info/requires.txt 2023-11-25T07:03:01,648 writing top-level names to /tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats.egg-info/top_level.txt 2023-11-25T07:03:01,650 writing manifest file '/tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats.egg-info/SOURCES.txt' 2023-11-25T07:03:01,687 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-11-25T07:03:01,690 reading manifest file '/tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats.egg-info/SOURCES.txt' 2023-11-25T07:03:01,693 adding license file 'LICENSE' 2023-11-25T07:03:01,695 writing manifest file '/tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats.egg-info/SOURCES.txt' 2023-11-25T07:03:01,696 creating '/tmp/pip-modern-metadata-5sx51m_f/bioio_bioformats-0.9.0.dist-info' 2023-11-25T07:03:01,863 Preparing metadata (pyproject.toml): finished with status 'done' 2023-11-25T07:03:01,867 Source in /tmp/pip-wheel-wi1k2r91/bioio-bioformats_e9ab27d543a340a4ba5198db6c7903a2 has version 0.9.0, which satisfies requirement bioio-bioformats==0.9.0 from https://files.pythonhosted.org/packages/b4/a9/1460a15f082c731cced8dcbd37a777704f0c755fc503209b14d6fdd2e60f/bioio-bioformats-0.9.0.tar.gz 2023-11-25T07:03:01,868 Removed bioio-bioformats==0.9.0 from https://files.pythonhosted.org/packages/b4/a9/1460a15f082c731cced8dcbd37a777704f0c755fc503209b14d6fdd2e60f/bioio-bioformats-0.9.0.tar.gz from build tracker '/tmp/pip-build-tracker-q1om4v8o' 2023-11-25T07:03:01,874 Created temporary directory: /tmp/pip-unpack-stk72rfn 2023-11-25T07:03:01,875 Created temporary directory: /tmp/pip-unpack-p6e_4jeh 2023-11-25T07:03:01,925 Building wheels for collected packages: bioio-bioformats 2023-11-25T07:03:01,929 Created temporary directory: /tmp/pip-wheel-0o8p3czk 2023-11-25T07:03:01,929 Destination directory: /tmp/pip-wheel-0o8p3czk 2023-11-25T07:03:01,931 Building wheel for bioio-bioformats (pyproject.toml): started 2023-11-25T07:03:01,932 Running command Building wheel for bioio-bioformats (pyproject.toml) 2023-11-25T07:03:02,779 running bdist_wheel 2023-11-25T07:03:02,801 running build 2023-11-25T07:03:02,802 running build_py 2023-11-25T07:03:02,808 creating build 2023-11-25T07:03:02,808 creating build/lib 2023-11-25T07:03:02,809 creating build/lib/bioio_bioformats 2023-11-25T07:03:02,810 copying bioio_bioformats/__init__.py -> build/lib/bioio_bioformats 2023-11-25T07:03:02,812 copying bioio_bioformats/reader.py -> build/lib/bioio_bioformats 2023-11-25T07:03:02,814 copying bioio_bioformats/biofile.py -> build/lib/bioio_bioformats 2023-11-25T07:03:02,816 copying bioio_bioformats/utils.py -> build/lib/bioio_bioformats 2023-11-25T07:03:02,819 copying bioio_bioformats/coremeta.py -> build/lib/bioio_bioformats 2023-11-25T07:03:02,821 copying bioio_bioformats/reader_metadata.py -> build/lib/bioio_bioformats 2023-11-25T07:03:02,823 creating build/lib/scripts 2023-11-25T07:03:02,824 copying scripts/download_test_resources.py -> build/lib/scripts 2023-11-25T07:03:02,825 copying scripts/upload_test_resources.py -> build/lib/scripts 2023-11-25T07:03:02,828 creating build/lib/docs 2023-11-25T07:03:02,829 copying docs/conf.py -> build/lib/docs 2023-11-25T07:03:02,832 creating build/lib/bioio_bioformats/tests 2023-11-25T07:03:02,833 copying bioio_bioformats/tests/__init__.py -> build/lib/bioio_bioformats/tests 2023-11-25T07:03:02,835 copying bioio_bioformats/tests/test_reader.py -> build/lib/bioio_bioformats/tests 2023-11-25T07:03:02,837 copying bioio_bioformats/tests/conftest.py -> build/lib/bioio_bioformats/tests 2023-11-25T07:03:02,838 running egg_info 2023-11-25T07:03:02,843 writing bioio_bioformats.egg-info/PKG-INFO 2023-11-25T07:03:02,851 writing dependency_links to bioio_bioformats.egg-info/dependency_links.txt 2023-11-25T07:03:02,853 writing entry points to bioio_bioformats.egg-info/entry_points.txt 2023-11-25T07:03:02,857 writing requirements to bioio_bioformats.egg-info/requires.txt 2023-11-25T07:03:02,858 writing top-level names to bioio_bioformats.egg-info/top_level.txt 2023-11-25T07:03:02,887 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-11-25T07:03:02,890 reading manifest file 'bioio_bioformats.egg-info/SOURCES.txt' 2023-11-25T07:03:02,892 adding license file 'LICENSE' 2023-11-25T07:03:02,895 writing manifest file 'bioio_bioformats.egg-info/SOURCES.txt' 2023-11-25T07:03:02,901 copying bioio_bioformats/py.typed -> build/lib/bioio_bioformats 2023-11-25T07:03:02,903 copying scripts/TEST_RESOURCES_HASH.txt -> build/lib/scripts 2023-11-25T07:03:02,906 copying docs/contributing.rst -> build/lib/docs 2023-11-25T07:03:02,908 copying docs/index.rst -> build/lib/docs 2023-11-25T07:03:02,911 copying docs/installation.rst -> build/lib/docs 2023-11-25T07:03:02,925 installing to build/bdist.linux-armv7l/wheel 2023-11-25T07:03:02,925 running install 2023-11-25T07:03:02,949 running install_lib 2023-11-25T07:03:02,955 creating build/bdist.linux-armv7l 2023-11-25T07:03:02,956 creating build/bdist.linux-armv7l/wheel 2023-11-25T07:03:02,957 creating build/bdist.linux-armv7l/wheel/bioio_bioformats 2023-11-25T07:03:02,958 copying build/lib/bioio_bioformats/__init__.py -> build/bdist.linux-armv7l/wheel/bioio_bioformats 2023-11-25T07:03:02,960 copying build/lib/bioio_bioformats/py.typed -> build/bdist.linux-armv7l/wheel/bioio_bioformats 2023-11-25T07:03:02,961 copying build/lib/bioio_bioformats/reader.py -> build/bdist.linux-armv7l/wheel/bioio_bioformats 2023-11-25T07:03:02,964 copying build/lib/bioio_bioformats/biofile.py -> build/bdist.linux-armv7l/wheel/bioio_bioformats 2023-11-25T07:03:02,966 copying build/lib/bioio_bioformats/utils.py -> build/bdist.linux-armv7l/wheel/bioio_bioformats 2023-11-25T07:03:02,969 creating build/bdist.linux-armv7l/wheel/bioio_bioformats/tests 2023-11-25T07:03:02,970 copying build/lib/bioio_bioformats/tests/__init__.py -> build/bdist.linux-armv7l/wheel/bioio_bioformats/tests 2023-11-25T07:03:02,971 copying build/lib/bioio_bioformats/tests/test_reader.py -> build/bdist.linux-armv7l/wheel/bioio_bioformats/tests 2023-11-25T07:03:02,974 copying build/lib/bioio_bioformats/tests/conftest.py -> build/bdist.linux-armv7l/wheel/bioio_bioformats/tests 2023-11-25T07:03:02,976 copying build/lib/bioio_bioformats/coremeta.py -> build/bdist.linux-armv7l/wheel/bioio_bioformats 2023-11-25T07:03:02,977 copying build/lib/bioio_bioformats/reader_metadata.py -> build/bdist.linux-armv7l/wheel/bioio_bioformats 2023-11-25T07:03:02,980 creating build/bdist.linux-armv7l/wheel/scripts 2023-11-25T07:03:02,981 copying build/lib/scripts/download_test_resources.py -> build/bdist.linux-armv7l/wheel/scripts 2023-11-25T07:03:02,983 copying build/lib/scripts/TEST_RESOURCES_HASH.txt -> build/bdist.linux-armv7l/wheel/scripts 2023-11-25T07:03:02,984 copying build/lib/scripts/upload_test_resources.py -> build/bdist.linux-armv7l/wheel/scripts 2023-11-25T07:03:02,987 creating build/bdist.linux-armv7l/wheel/docs 2023-11-25T07:03:02,988 copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs 2023-11-25T07:03:02,990 copying build/lib/docs/installation.rst -> build/bdist.linux-armv7l/wheel/docs 2023-11-25T07:03:02,991 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs 2023-11-25T07:03:02,994 copying build/lib/docs/contributing.rst -> build/bdist.linux-armv7l/wheel/docs 2023-11-25T07:03:02,995 running install_egg_info 2023-11-25T07:03:03,000 Copying bioio_bioformats.egg-info to build/bdist.linux-armv7l/wheel/bioio_bioformats-0.9.0-py3.11.egg-info 2023-11-25T07:03:03,013 running install_scripts 2023-11-25T07:03:03,034 creating build/bdist.linux-armv7l/wheel/bioio_bioformats-0.9.0.dist-info/WHEEL 2023-11-25T07:03:03,036 creating '/tmp/pip-wheel-0o8p3czk/.tmp-ctq1lrk8/bioio_bioformats-0.9.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-25T07:03:03,038 adding 'bioio_bioformats/__init__.py' 2023-11-25T07:03:03,040 adding 'bioio_bioformats/biofile.py' 2023-11-25T07:03:03,042 adding 'bioio_bioformats/coremeta.py' 2023-11-25T07:03:03,043 adding 'bioio_bioformats/py.typed' 2023-11-25T07:03:03,045 adding 'bioio_bioformats/reader.py' 2023-11-25T07:03:03,046 adding 'bioio_bioformats/reader_metadata.py' 2023-11-25T07:03:03,050 adding 'bioio_bioformats/utils.py' 2023-11-25T07:03:03,052 adding 'bioio_bioformats/tests/__init__.py' 2023-11-25T07:03:03,053 adding 'bioio_bioformats/tests/conftest.py' 2023-11-25T07:03:03,055 adding 'bioio_bioformats/tests/test_reader.py' 2023-11-25T07:03:03,058 adding 'docs/conf.py' 2023-11-25T07:03:03,060 adding 'docs/contributing.rst' 2023-11-25T07:03:03,061 adding 'docs/index.rst' 2023-11-25T07:03:03,062 adding 'docs/installation.rst' 2023-11-25T07:03:03,064 adding 'scripts/TEST_RESOURCES_HASH.txt' 2023-11-25T07:03:03,065 adding 'scripts/download_test_resources.py' 2023-11-25T07:03:03,067 adding 'scripts/upload_test_resources.py' 2023-11-25T07:03:03,074 adding 'bioio_bioformats-0.9.0.dist-info/LICENSE' 2023-11-25T07:03:03,075 adding 'bioio_bioformats-0.9.0.dist-info/METADATA' 2023-11-25T07:03:03,076 adding 'bioio_bioformats-0.9.0.dist-info/WHEEL' 2023-11-25T07:03:03,077 adding 'bioio_bioformats-0.9.0.dist-info/entry_points.txt' 2023-11-25T07:03:03,078 adding 'bioio_bioformats-0.9.0.dist-info/top_level.txt' 2023-11-25T07:03:03,079 adding 'bioio_bioformats-0.9.0.dist-info/RECORD' 2023-11-25T07:03:03,081 removing build/bdist.linux-armv7l/wheel 2023-11-25T07:03:03,217 Building wheel for bioio-bioformats (pyproject.toml): finished with status 'done' 2023-11-25T07:03:03,222 Created wheel for bioio-bioformats: filename=bioio_bioformats-0.9.0-py3-none-any.whl size=41073 sha256=9429ccff393a1edbb048475928e23e9640cebee7e899c078cf212ea25e33e719 2023-11-25T07:03:03,223 Stored in directory: /tmp/pip-ephem-wheel-cache-ytfx4l0t/wheels/e4/b8/91/e9970d3b7d6612f67111fabfd48974e020853ef4b5be03009d 2023-11-25T07:03:03,235 Successfully built bioio-bioformats 2023-11-25T07:03:03,239 Removed build tracker: '/tmp/pip-build-tracker-q1om4v8o'