2023-11-28T12:22:34,689 Created temporary directory: /tmp/pip-build-tracker-gdw3g8k1 2023-11-28T12:22:34,691 Initialized build tracking at /tmp/pip-build-tracker-gdw3g8k1 2023-11-28T12:22:34,691 Created build tracker: /tmp/pip-build-tracker-gdw3g8k1 2023-11-28T12:22:34,692 Entered build tracker: /tmp/pip-build-tracker-gdw3g8k1 2023-11-28T12:22:34,693 Created temporary directory: /tmp/pip-wheel-55m4duc9 2023-11-28T12:22:34,696 Created temporary directory: /tmp/pip-ephem-wheel-cache-ky1f6mx_ 2023-11-28T12:22:34,721 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-28T12:22:34,725 2 location(s) to search for versions of rnaglib: 2023-11-28T12:22:34,725 * https://pypi.org/simple/rnaglib/ 2023-11-28T12:22:34,725 * https://www.piwheels.org/simple/rnaglib/ 2023-11-28T12:22:34,726 Fetching project page and analyzing links: https://pypi.org/simple/rnaglib/ 2023-11-28T12:22:34,727 Getting page https://pypi.org/simple/rnaglib/ 2023-11-28T12:22:34,728 Found index url https://pypi.org/simple/ 2023-11-28T12:22:34,944 Fetched page https://pypi.org/simple/rnaglib/ as application/vnd.pypi.simple.v1+json 2023-11-28T12:22:34,951 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/a3/f8/38f3ce999f666541abdfed01d71e23c9c918a6b2442d8c88d2d1739930ee/rnaglib-0.0.1-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-28T12:22:34,951 Found link https://files.pythonhosted.org/packages/dc/5d/6e58f6b44267f40696ff7c00daa3a3da57d775144c89150a317e2135afc3/rnaglib-0.0.1.tar.gz (from https://pypi.org/simple/rnaglib/), version: 0.0.1 2023-11-28T12:22:34,952 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/3f/95/0eb19bfc8e420eafc60439ce97e0b64a65a86931fa4badbc4320248c6a30/rnaglib-0.0.2-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-28T12:22:34,953 Found link https://files.pythonhosted.org/packages/25/1c/e32ca46f4e9302dc39ef0f1af0c297583f2144c1dae53327969fd92fbc44/rnaglib-0.0.2.tar.gz (from https://pypi.org/simple/rnaglib/), version: 0.0.2 2023-11-28T12:22:34,953 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/f2/45/7a988b90a2652da74a9115ee713f2693549d80846b2d689af61f1a3ff021/rnaglib-1.0.0-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-28T12:22:34,954 Found link https://files.pythonhosted.org/packages/82/08/ba03a1be69536eae29e70494cbfe34f52a62b75817651012df2277ca9292/rnaglib-1.0.0.tar.gz (from https://pypi.org/simple/rnaglib/), version: 1.0.0 2023-11-28T12:22:34,955 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/3b/de/cf795a08ed80a36dde6632ff30dae32f1e1fad7d3c95c876ec23370b8273/rnaglib-1.0.1-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-28T12:22:34,956 Found link https://files.pythonhosted.org/packages/24/19/9074f7b9bee68f1e962d87b1c632104cdd29f678f67d439bb31cc2661248/rnaglib-1.0.1.tar.gz (from https://pypi.org/simple/rnaglib/), version: 1.0.1 2023-11-28T12:22:34,957 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/90/b3/853f199e5fde9eaec168e992020a1bce30d3a06e62115481f98b8fdcbcd9/rnaglib-2.0.0-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-28T12:22:34,957 Found link https://files.pythonhosted.org/packages/5f/e9/5fc4a056a08b619c3ee40c387a391b06091476574ba7d90c3c1b8a5177db/rnaglib-2.0.0.tar.gz (from https://pypi.org/simple/rnaglib/), version: 2.0.0 2023-11-28T12:22:34,958 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/43/d3/5e0fc72bfa33ce35533aa8edda4401af573b98912857cf8a9076aba9ad5a/rnaglib-2.0.1-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) 2023-11-28T12:22:34,959 Found link https://files.pythonhosted.org/packages/59/b3/8b34d8832c4fc0dddca78c03cf0d8d3891d2dd8fcdc170ace0fc0a875d8b/rnaglib-2.0.1.tar.gz (from https://pypi.org/simple/rnaglib/), version: 2.0.1 2023-11-28T12:22:34,959 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/68/64/7770020a366076609f9555899a81619670cc96061078950b4052faf8935b/rnaglib-2.0.2-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:34,960 Found link https://files.pythonhosted.org/packages/70/6f/3391d572ad802a6e9e1466b1c9033871612e275299fad4f9ab86fadb88a3/rnaglib-2.0.2.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.2 2023-11-28T12:22:34,962 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/18/d4/e74fa266504f52d9dbac5a38b70db78bd5532be3d3adf10c6bc2e6fb51c8/rnaglib-2.0.3-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:34,962 Found link https://files.pythonhosted.org/packages/24/be/8d19b3b3ee32030b5733b64397e0bf86097b1d745c73fecfc94f791575cb/rnaglib-2.0.3.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.3 2023-11-28T12:22:34,963 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/6d/87/18f1b7349605bf131bd801440ddd97f472b0f12d5a102342c69dd90be7e3/rnaglib-2.0.4-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:34,964 Found link https://files.pythonhosted.org/packages/c0/37/ef1804644facc42ba2c86e0d0466308558fbb547de7b67ed507ab4deaa23/rnaglib-2.0.4.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.4 2023-11-28T12:22:34,965 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/a3/4f/68597d04b4c599f134e38e8dfdb12294a879f5c9c10889f79cfbdd88e0ae/rnaglib-2.0.6-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:34,966 Found link https://files.pythonhosted.org/packages/c8/b9/62da4eff3d4d17a656229340dc63635302e6b8575971ce1a0815eed6d7a0/rnaglib-2.0.6.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.6 2023-11-28T12:22:34,966 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/56/3b/9a81ef23778fc4181524f62f8d8f2901625797854d1d8bced2e92e9a2c9d/rnaglib-2.0.7-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:34,967 Found link https://files.pythonhosted.org/packages/e7/83/ec0ec023dcc6787b88c43334509fa57e3edbbe1609298fac25381208b0ef/rnaglib-2.0.7.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.7 2023-11-28T12:22:34,968 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/e3/5b/a5df91ca5ad58aedd933e491fa96d2feedc7604ae77ffad06ab806435c06/rnaglib-2.0.8-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:34,969 Found link https://files.pythonhosted.org/packages/92/96/6760c80c6e11b073952145bdc4b0c69f04fca09929526654434c3a184643/rnaglib-2.0.8.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.8 2023-11-28T12:22:34,970 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/8f/73/b082eac738c41ac2626a919c829fe5091610fb223de8641089da1be32f0c/rnaglib-2.0.9-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:34,971 Found link https://files.pythonhosted.org/packages/77/4f/99ea1241115b91a230a2ff434ca7616e683f6fa23a944d1045de08d0b760/rnaglib-2.0.9.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.9 2023-11-28T12:22:34,972 Skipping link: No binaries permitted for rnaglib: https://files.pythonhosted.org/packages/6c/03/97ba0ec3fb140068cb60b2f2386abcfa489bbd5cc233643d4392133c1d30/rnaglib-2.0.10-py3-none-any.whl (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:34,972 Found link https://files.pythonhosted.org/packages/33/b8/ec74d1d0cf455afb749c8edc2a95136a6bf7236660bb2b29987d5bfbb19e/rnaglib-2.0.10.tar.gz (from https://pypi.org/simple/rnaglib/) (requires-python:>=3.7), version: 2.0.10 2023-11-28T12:22:34,973 Fetching project page and analyzing links: https://www.piwheels.org/simple/rnaglib/ 2023-11-28T12:22:34,974 Getting page https://www.piwheels.org/simple/rnaglib/ 2023-11-28T12:22:34,976 Found index url https://www.piwheels.org/simple/ 2023-11-28T12:22:35,139 Fetched page https://www.piwheels.org/simple/rnaglib/ as text/html 2023-11-28T12:22:35,144 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.9-py3-none-any.whl#sha256=1d2d13d9a521b2b993923ec7ac2922a3f29650e4dc00639553c993291ea01969 (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:35,144 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.8-py3-none-any.whl#sha256=666ea4ca832fbb5225f93ef52e9dd98761bb5e8f7353e1b9d2d770c7aaeb82bc (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:35,145 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.7-py3-none-any.whl#sha256=b474ed56cb2763a4455b34034f3309d43e50054b4dd9e96b870072c9ac1f1f17 (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:35,145 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.6-py3-none-any.whl#sha256=f8e2b6853a8467b419e10ed76c56d685b1c0843c4b0a0cce305ba14bc43dacbd (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:35,146 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.4-py3-none-any.whl#sha256=d45a2ecd66fef0e722389a9793e9cbb54c5293dc89bedfc4b263abe9d2647018 (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:35,146 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.3-py3-none-any.whl#sha256=8c5ff31897de6ca54cbd58cfe31bf04474c23d0fb50b119b62200e9c2f65b605 (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:35,147 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-2.0.2-py3-none-any.whl#sha256=0200e766f0b13b06d5f898d066818c081ed09e01571d92ed7b4912218787fcf6 (from https://www.piwheels.org/simple/rnaglib/) (requires-python:>=3.7) 2023-11-28T12:22:35,148 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-1.0.1-py3-none-any.whl#sha256=5bd782ad43e7ba033b27aa10741b1aa27caff30ebf3fb145e5963c08abf03ee0 (from https://www.piwheels.org/simple/rnaglib/) 2023-11-28T12:22:35,148 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-1.0.0-py3-none-any.whl#sha256=861b765850bd13bb510b7bcc3ede3c666e18f27e796615e0f01503004ccc96af (from https://www.piwheels.org/simple/rnaglib/) 2023-11-28T12:22:35,149 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-0.0.2-py3-none-any.whl#sha256=c5e80decfdd04be4b6881b2f0cde78d932ef4cf48ded91720de2b1523cc85f89 (from https://www.piwheels.org/simple/rnaglib/) 2023-11-28T12:22:35,150 Skipping link: No binaries permitted for rnaglib: https://www.piwheels.org/simple/rnaglib/rnaglib-0.0.1-py3-none-any.whl#sha256=235f6b82380c2ca6a517fb7049ef71765872fa9024a92f4bca53b1d5af3342a6 (from https://www.piwheels.org/simple/rnaglib/) 2023-11-28T12:22:35,150 Skipping link: not a file: https://www.piwheels.org/simple/rnaglib/ 2023-11-28T12:22:35,151 Skipping link: not a file: https://pypi.org/simple/rnaglib/ 2023-11-28T12:22:35,172 Given no hashes to check 1 links for project 'rnaglib': discarding no candidates 2023-11-28T12:22:35,192 Collecting rnaglib==2.0.10 2023-11-28T12:22:35,195 Created temporary directory: /tmp/pip-unpack-pnf0sm69 2023-11-28T12:22:35,443 Downloading rnaglib-2.0.10.tar.gz (121 kB) 2023-11-28T12:22:35,670 Added rnaglib==2.0.10 from https://files.pythonhosted.org/packages/33/b8/ec74d1d0cf455afb749c8edc2a95136a6bf7236660bb2b29987d5bfbb19e/rnaglib-2.0.10.tar.gz to build tracker '/tmp/pip-build-tracker-gdw3g8k1' 2023-11-28T12:22:35,677 Created temporary directory: /tmp/pip-build-env-j54_au9j 2023-11-28T12:22:35,682 Installing build dependencies: started 2023-11-28T12:22:35,684 Running command pip subprocess to install build dependencies 2023-11-28T12:22:36,888 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-11-28T12:22:37,409 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-28T12:22:38,857 Collecting setuptools>=40.8.0 2023-11-28T12:22:38,873 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.2-py3-none-any.whl (819 kB) 2023-11-28T12:22:39,101 Collecting wheel 2023-11-28T12:22:39,116 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2023-11-28T12:22:41,741 Installing collected packages: wheel, setuptools 2023-11-28T12:22:41,996 Creating /tmp/pip-build-env-j54_au9j/overlay/local/bin 2023-11-28T12:22:41,998 changing mode of /tmp/pip-build-env-j54_au9j/overlay/local/bin/wheel to 755 2023-11-28T12:22:44,473 Successfully installed setuptools-69.0.2 wheel-0.42.0 2023-11-28T12:22:44,986 Installing build dependencies: finished with status 'done' 2023-11-28T12:22:44,989 Getting requirements to build wheel: started 2023-11-28T12:22:44,991 Running command Getting requirements to build wheel 2023-11-28T12:22:45,885 running egg_info 2023-11-28T12:22:45,891 writing rnaglib.egg-info/PKG-INFO 2023-11-28T12:22:45,895 writing dependency_links to rnaglib.egg-info/dependency_links.txt 2023-11-28T12:22:45,897 writing entry points to rnaglib.egg-info/entry_points.txt 2023-11-28T12:22:45,899 writing requirements to rnaglib.egg-info/requires.txt 2023-11-28T12:22:45,900 writing top-level names to rnaglib.egg-info/top_level.txt 2023-11-28T12:22:45,932 reading manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-28T12:22:45,936 adding license file 'LICENSE' 2023-11-28T12:22:45,939 writing manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-28T12:22:46,062 Getting requirements to build wheel: finished with status 'done' 2023-11-28T12:22:46,073 Created temporary directory: /tmp/pip-modern-metadata-68imxkd0 2023-11-28T12:22:46,075 Preparing metadata (pyproject.toml): started 2023-11-28T12:22:46,077 Running command Preparing metadata (pyproject.toml) 2023-11-28T12:22:46,887 running dist_info 2023-11-28T12:22:46,893 creating /tmp/pip-modern-metadata-68imxkd0/rnaglib.egg-info 2023-11-28T12:22:46,898 writing /tmp/pip-modern-metadata-68imxkd0/rnaglib.egg-info/PKG-INFO 2023-11-28T12:22:46,902 writing dependency_links to /tmp/pip-modern-metadata-68imxkd0/rnaglib.egg-info/dependency_links.txt 2023-11-28T12:22:46,904 writing entry points to /tmp/pip-modern-metadata-68imxkd0/rnaglib.egg-info/entry_points.txt 2023-11-28T12:22:46,906 writing requirements to /tmp/pip-modern-metadata-68imxkd0/rnaglib.egg-info/requires.txt 2023-11-28T12:22:46,907 writing top-level names to /tmp/pip-modern-metadata-68imxkd0/rnaglib.egg-info/top_level.txt 2023-11-28T12:22:46,909 writing manifest file '/tmp/pip-modern-metadata-68imxkd0/rnaglib.egg-info/SOURCES.txt' 2023-11-28T12:22:46,933 reading manifest file '/tmp/pip-modern-metadata-68imxkd0/rnaglib.egg-info/SOURCES.txt' 2023-11-28T12:22:46,936 adding license file 'LICENSE' 2023-11-28T12:22:46,939 writing manifest file '/tmp/pip-modern-metadata-68imxkd0/rnaglib.egg-info/SOURCES.txt' 2023-11-28T12:22:46,940 creating '/tmp/pip-modern-metadata-68imxkd0/rnaglib-2.0.10.dist-info' 2023-11-28T12:22:47,101 Preparing metadata (pyproject.toml): finished with status 'done' 2023-11-28T12:22:47,106 Source in /tmp/pip-wheel-55m4duc9/rnaglib_c678295e58924beb81dcc190404b3cb1 has version 2.0.10, which satisfies requirement rnaglib==2.0.10 from https://files.pythonhosted.org/packages/33/b8/ec74d1d0cf455afb749c8edc2a95136a6bf7236660bb2b29987d5bfbb19e/rnaglib-2.0.10.tar.gz 2023-11-28T12:22:47,107 Removed rnaglib==2.0.10 from https://files.pythonhosted.org/packages/33/b8/ec74d1d0cf455afb749c8edc2a95136a6bf7236660bb2b29987d5bfbb19e/rnaglib-2.0.10.tar.gz from build tracker '/tmp/pip-build-tracker-gdw3g8k1' 2023-11-28T12:22:47,114 Created temporary directory: /tmp/pip-unpack-knp_dzb6 2023-11-28T12:22:47,116 Created temporary directory: /tmp/pip-unpack-t0krul3i 2023-11-28T12:22:47,127 Building wheels for collected packages: rnaglib 2023-11-28T12:22:47,132 Created temporary directory: /tmp/pip-wheel-p_wzvaxg 2023-11-28T12:22:47,132 Destination directory: /tmp/pip-wheel-p_wzvaxg 2023-11-28T12:22:47,135 Building wheel for rnaglib (pyproject.toml): started 2023-11-28T12:22:47,136 Running command Building wheel for rnaglib (pyproject.toml) 2023-11-28T12:22:47,930 running bdist_wheel 2023-11-28T12:22:47,950 running build 2023-11-28T12:22:47,951 running build_py 2023-11-28T12:22:47,956 creating build 2023-11-28T12:22:47,957 creating build/lib 2023-11-28T12:22:47,958 creating build/lib/rnaglib 2023-11-28T12:22:47,959 copying rnaglib/__init__.py -> build/lib/rnaglib 2023-11-28T12:22:47,962 creating build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,963 copying rnaglib/prepare_data/hash_check.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,965 copying rnaglib/prepare_data/khop_annotate.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,968 copying rnaglib/prepare_data/annotations.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,970 copying rnaglib/prepare_data/test.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,972 copying rnaglib/prepare_data/fr3d_2_graphs.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,975 copying rnaglib/prepare_data/filters.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,976 copying rnaglib/prepare_data/main.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,979 copying rnaglib/prepare_data/dssr_2_graphs.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,981 copying rnaglib/prepare_data/retrieve_structures.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,983 copying rnaglib/prepare_data/describe_datasets.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,985 copying rnaglib/prepare_data/chopper.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,987 copying rnaglib/prepare_data/__init__.py -> build/lib/rnaglib/prepare_data 2023-11-28T12:22:47,990 creating build/lib/rnaglib/data_loading 2023-11-28T12:22:47,991 copying rnaglib/data_loading/rna_dataset.py -> build/lib/rnaglib/data_loading 2023-11-28T12:22:47,993 copying rnaglib/data_loading/rna_loader.py -> build/lib/rnaglib/data_loading 2023-11-28T12:22:47,996 copying rnaglib/data_loading/get_statistics.py -> build/lib/rnaglib/data_loading 2023-11-28T12:22:47,999 copying rnaglib/data_loading/test.py -> build/lib/rnaglib/data_loading 2023-11-28T12:22:48,001 copying rnaglib/data_loading/feature_maps.py -> build/lib/rnaglib/data_loading 2023-11-28T12:22:48,003 copying rnaglib/data_loading/splitting.py -> build/lib/rnaglib/data_loading 2023-11-28T12:22:48,005 copying rnaglib/data_loading/__init__.py -> build/lib/rnaglib/data_loading 2023-11-28T12:22:48,008 creating build/lib/rnaglib/representations 2023-11-28T12:22:48,009 copying rnaglib/representations/representation.py -> build/lib/rnaglib/representations 2023-11-28T12:22:48,011 copying rnaglib/representations/rings.py -> build/lib/rnaglib/representations 2023-11-28T12:22:48,013 copying rnaglib/representations/graph.py -> build/lib/rnaglib/representations 2023-11-28T12:22:48,015 copying rnaglib/representations/voxel.py -> build/lib/rnaglib/representations 2023-11-28T12:22:48,017 copying rnaglib/representations/point_cloud.py -> build/lib/rnaglib/representations 2023-11-28T12:22:48,019 copying rnaglib/representations/__init__.py -> build/lib/rnaglib/representations 2023-11-28T12:22:48,022 creating build/lib/rnaglib/drawing 2023-11-28T12:22:48,023 copying rnaglib/drawing/rna_draw.py -> build/lib/rnaglib/drawing 2023-11-28T12:22:48,025 copying rnaglib/drawing/rna_layout.py -> build/lib/rnaglib/drawing 2023-11-28T12:22:48,027 copying rnaglib/drawing/__init__.py -> build/lib/rnaglib/drawing 2023-11-28T12:22:48,030 creating build/lib/rnaglib/ged 2023-11-28T12:22:48,031 copying rnaglib/ged/rna_ged_nx.py -> build/lib/rnaglib/ged 2023-11-28T12:22:48,033 copying rnaglib/ged/ged_nx.py -> build/lib/rnaglib/ged 2023-11-28T12:22:48,037 copying rnaglib/ged/__init__.py -> build/lib/rnaglib/ged 2023-11-28T12:22:48,039 creating build/lib/rnaglib/kernels 2023-11-28T12:22:48,040 copying rnaglib/kernels/node_sim.py -> build/lib/rnaglib/kernels 2023-11-28T12:22:48,042 copying rnaglib/kernels/__init__.py -> build/lib/rnaglib/kernels 2023-11-28T12:22:48,044 creating build/lib/rnaglib/learning 2023-11-28T12:22:48,045 copying rnaglib/learning/models.py -> build/lib/rnaglib/learning 2023-11-28T12:22:48,048 copying rnaglib/learning/learn.py -> build/lib/rnaglib/learning 2023-11-28T12:22:48,050 copying rnaglib/learning/__init__.py -> build/lib/rnaglib/learning 2023-11-28T12:22:48,052 copying rnaglib/learning/learning_utils.py -> build/lib/rnaglib/learning 2023-11-28T12:22:48,055 creating build/lib/rnaglib/utils 2023-11-28T12:22:48,056 copying rnaglib/utils/graphlet_hash.py -> build/lib/rnaglib/utils 2023-11-28T12:22:48,059 copying rnaglib/utils/graph_io.py -> build/lib/rnaglib/utils 2023-11-28T12:22:48,062 copying rnaglib/utils/graph_utils.py -> build/lib/rnaglib/utils 2023-11-28T12:22:48,064 copying rnaglib/utils/misc.py -> build/lib/rnaglib/utils 2023-11-28T12:22:48,066 copying rnaglib/utils/feature_maps.py -> build/lib/rnaglib/utils 2023-11-28T12:22:48,069 copying rnaglib/utils/__init__.py -> build/lib/rnaglib/utils 2023-11-28T12:22:48,071 creating build/lib/rnaglib/config 2023-11-28T12:22:48,072 copying rnaglib/config/ligands.py -> build/lib/rnaglib/config 2023-11-28T12:22:48,074 copying rnaglib/config/graph_keys.py -> build/lib/rnaglib/config 2023-11-28T12:22:48,076 copying rnaglib/config/build_iso_mat.py -> build/lib/rnaglib/config 2023-11-28T12:22:48,078 copying rnaglib/config/__init__.py -> build/lib/rnaglib/config 2023-11-28T12:22:48,079 running egg_info 2023-11-28T12:22:48,085 writing rnaglib.egg-info/PKG-INFO 2023-11-28T12:22:48,088 writing dependency_links to rnaglib.egg-info/dependency_links.txt 2023-11-28T12:22:48,090 writing entry points to rnaglib.egg-info/entry_points.txt 2023-11-28T12:22:48,092 writing requirements to rnaglib.egg-info/requires.txt 2023-11-28T12:22:48,093 writing top-level names to rnaglib.egg-info/top_level.txt 2023-11-28T12:22:48,109 reading manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-28T12:22:48,112 adding license file 'LICENSE' 2023-11-28T12:22:48,115 writing manifest file 'rnaglib.egg-info/SOURCES.txt' 2023-11-28T12:22:48,122 copying rnaglib/data_loading/graph_index_NR.json -> build/lib/rnaglib/data_loading 2023-11-28T12:22:48,126 copying rnaglib/config/rna_smiles.txt -> build/lib/rnaglib/config 2023-11-28T12:22:48,143 installing to build/bdist.linux-aarch64/wheel 2023-11-28T12:22:48,144 running install 2023-11-28T12:22:48,168 running install_lib 2023-11-28T12:22:48,173 creating build/bdist.linux-aarch64 2023-11-28T12:22:48,174 creating build/bdist.linux-aarch64/wheel 2023-11-28T12:22:48,176 creating build/bdist.linux-aarch64/wheel/rnaglib 2023-11-28T12:22:48,178 creating build/bdist.linux-aarch64/wheel/rnaglib/learning 2023-11-28T12:22:48,179 copying build/lib/rnaglib/learning/models.py -> build/bdist.linux-aarch64/wheel/rnaglib/learning 2023-11-28T12:22:48,182 copying build/lib/rnaglib/learning/learn.py -> build/bdist.linux-aarch64/wheel/rnaglib/learning 2023-11-28T12:22:48,185 copying build/lib/rnaglib/learning/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib/learning 2023-11-28T12:22:48,187 copying build/lib/rnaglib/learning/learning_utils.py -> build/bdist.linux-aarch64/wheel/rnaglib/learning 2023-11-28T12:22:48,190 creating build/bdist.linux-aarch64/wheel/rnaglib/data_loading 2023-11-28T12:22:48,191 copying build/lib/rnaglib/data_loading/graph_index_NR.json -> build/bdist.linux-aarch64/wheel/rnaglib/data_loading 2023-11-28T12:22:48,195 copying build/lib/rnaglib/data_loading/rna_dataset.py -> build/bdist.linux-aarch64/wheel/rnaglib/data_loading 2023-11-28T12:22:48,198 copying build/lib/rnaglib/data_loading/rna_loader.py -> build/bdist.linux-aarch64/wheel/rnaglib/data_loading 2023-11-28T12:22:48,201 copying build/lib/rnaglib/data_loading/get_statistics.py -> build/bdist.linux-aarch64/wheel/rnaglib/data_loading 2023-11-28T12:22:48,204 copying build/lib/rnaglib/data_loading/test.py -> build/bdist.linux-aarch64/wheel/rnaglib/data_loading 2023-11-28T12:22:48,206 copying build/lib/rnaglib/data_loading/feature_maps.py -> build/bdist.linux-aarch64/wheel/rnaglib/data_loading 2023-11-28T12:22:48,208 copying build/lib/rnaglib/data_loading/splitting.py -> build/bdist.linux-aarch64/wheel/rnaglib/data_loading 2023-11-28T12:22:48,211 copying build/lib/rnaglib/data_loading/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib/data_loading 2023-11-28T12:22:48,213 creating build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,214 copying build/lib/rnaglib/prepare_data/hash_check.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,217 copying build/lib/rnaglib/prepare_data/khop_annotate.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,219 copying build/lib/rnaglib/prepare_data/annotations.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,222 copying build/lib/rnaglib/prepare_data/test.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,224 copying build/lib/rnaglib/prepare_data/fr3d_2_graphs.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,227 copying build/lib/rnaglib/prepare_data/filters.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,229 copying build/lib/rnaglib/prepare_data/main.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,231 copying build/lib/rnaglib/prepare_data/dssr_2_graphs.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,234 copying build/lib/rnaglib/prepare_data/retrieve_structures.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,236 copying build/lib/rnaglib/prepare_data/describe_datasets.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,238 copying build/lib/rnaglib/prepare_data/chopper.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,241 copying build/lib/rnaglib/prepare_data/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib/prepare_data 2023-11-28T12:22:48,243 creating build/bdist.linux-aarch64/wheel/rnaglib/utils 2023-11-28T12:22:48,244 copying build/lib/rnaglib/utils/graphlet_hash.py -> build/bdist.linux-aarch64/wheel/rnaglib/utils 2023-11-28T12:22:48,247 copying build/lib/rnaglib/utils/graph_io.py -> build/bdist.linux-aarch64/wheel/rnaglib/utils 2023-11-28T12:22:48,249 copying build/lib/rnaglib/utils/graph_utils.py -> build/bdist.linux-aarch64/wheel/rnaglib/utils 2023-11-28T12:22:48,252 copying build/lib/rnaglib/utils/misc.py -> build/bdist.linux-aarch64/wheel/rnaglib/utils 2023-11-28T12:22:48,254 copying build/lib/rnaglib/utils/feature_maps.py -> build/bdist.linux-aarch64/wheel/rnaglib/utils 2023-11-28T12:22:48,257 copying build/lib/rnaglib/utils/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib/utils 2023-11-28T12:22:48,260 creating build/bdist.linux-aarch64/wheel/rnaglib/drawing 2023-11-28T12:22:48,261 copying build/lib/rnaglib/drawing/rna_draw.py -> build/bdist.linux-aarch64/wheel/rnaglib/drawing 2023-11-28T12:22:48,264 copying build/lib/rnaglib/drawing/rna_layout.py -> build/bdist.linux-aarch64/wheel/rnaglib/drawing 2023-11-28T12:22:48,266 copying build/lib/rnaglib/drawing/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib/drawing 2023-11-28T12:22:48,268 creating build/bdist.linux-aarch64/wheel/rnaglib/config 2023-11-28T12:22:48,270 copying build/lib/rnaglib/config/ligands.py -> build/bdist.linux-aarch64/wheel/rnaglib/config 2023-11-28T12:22:48,272 copying build/lib/rnaglib/config/graph_keys.py -> build/bdist.linux-aarch64/wheel/rnaglib/config 2023-11-28T12:22:48,275 copying build/lib/rnaglib/config/rna_smiles.txt -> build/bdist.linux-aarch64/wheel/rnaglib/config 2023-11-28T12:22:48,278 copying build/lib/rnaglib/config/build_iso_mat.py -> build/bdist.linux-aarch64/wheel/rnaglib/config 2023-11-28T12:22:48,280 copying build/lib/rnaglib/config/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib/config 2023-11-28T12:22:48,283 creating build/bdist.linux-aarch64/wheel/rnaglib/ged 2023-11-28T12:22:48,284 copying build/lib/rnaglib/ged/rna_ged_nx.py -> build/bdist.linux-aarch64/wheel/rnaglib/ged 2023-11-28T12:22:48,286 copying build/lib/rnaglib/ged/ged_nx.py -> build/bdist.linux-aarch64/wheel/rnaglib/ged 2023-11-28T12:22:48,289 copying build/lib/rnaglib/ged/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib/ged 2023-11-28T12:22:48,291 copying build/lib/rnaglib/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib 2023-11-28T12:22:48,293 creating build/bdist.linux-aarch64/wheel/rnaglib/kernels 2023-11-28T12:22:48,294 copying build/lib/rnaglib/kernels/node_sim.py -> build/bdist.linux-aarch64/wheel/rnaglib/kernels 2023-11-28T12:22:48,297 copying build/lib/rnaglib/kernels/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib/kernels 2023-11-28T12:22:48,299 creating build/bdist.linux-aarch64/wheel/rnaglib/representations 2023-11-28T12:22:48,300 copying build/lib/rnaglib/representations/representation.py -> build/bdist.linux-aarch64/wheel/rnaglib/representations 2023-11-28T12:22:48,302 copying build/lib/rnaglib/representations/rings.py -> build/bdist.linux-aarch64/wheel/rnaglib/representations 2023-11-28T12:22:48,304 copying build/lib/rnaglib/representations/graph.py -> build/bdist.linux-aarch64/wheel/rnaglib/representations 2023-11-28T12:22:48,306 copying build/lib/rnaglib/representations/voxel.py -> build/bdist.linux-aarch64/wheel/rnaglib/representations 2023-11-28T12:22:48,308 copying build/lib/rnaglib/representations/point_cloud.py -> build/bdist.linux-aarch64/wheel/rnaglib/representations 2023-11-28T12:22:48,310 copying build/lib/rnaglib/representations/__init__.py -> build/bdist.linux-aarch64/wheel/rnaglib/representations 2023-11-28T12:22:48,312 running install_egg_info 2023-11-28T12:22:48,317 Copying rnaglib.egg-info to build/bdist.linux-aarch64/wheel/rnaglib-2.0.10-py3.11.egg-info 2023-11-28T12:22:48,330 running install_scripts 2023-11-28T12:22:48,347 creating build/bdist.linux-aarch64/wheel/rnaglib-2.0.10.dist-info/WHEEL 2023-11-28T12:22:48,350 creating '/tmp/pip-wheel-p_wzvaxg/.tmp-8hgu6a4w/rnaglib-2.0.10-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it 2023-11-28T12:22:48,353 adding 'rnaglib/__init__.py' 2023-11-28T12:22:48,355 adding 'rnaglib/config/__init__.py' 2023-11-28T12:22:48,357 adding 'rnaglib/config/build_iso_mat.py' 2023-11-28T12:22:48,358 adding 'rnaglib/config/graph_keys.py' 2023-11-28T12:22:48,360 adding 'rnaglib/config/ligands.py' 2023-11-28T12:22:48,366 adding 'rnaglib/config/rna_smiles.txt' 2023-11-28T12:22:48,369 adding 'rnaglib/data_loading/__init__.py' 2023-11-28T12:22:48,371 adding 'rnaglib/data_loading/feature_maps.py' 2023-11-28T12:22:48,373 adding 'rnaglib/data_loading/get_statistics.py' 2023-11-28T12:22:48,388 adding 'rnaglib/data_loading/graph_index_NR.json' 2023-11-28T12:22:48,390 adding 'rnaglib/data_loading/rna_dataset.py' 2023-11-28T12:22:48,393 adding 'rnaglib/data_loading/rna_loader.py' 2023-11-28T12:22:48,394 adding 'rnaglib/data_loading/splitting.py' 2023-11-28T12:22:48,396 adding 'rnaglib/data_loading/test.py' 2023-11-28T12:22:48,398 adding 'rnaglib/drawing/__init__.py' 2023-11-28T12:22:48,400 adding 'rnaglib/drawing/rna_draw.py' 2023-11-28T12:22:48,401 adding 'rnaglib/drawing/rna_layout.py' 2023-11-28T12:22:48,403 adding 'rnaglib/ged/__init__.py' 2023-11-28T12:22:48,408 adding 'rnaglib/ged/ged_nx.py' 2023-11-28T12:22:48,410 adding 'rnaglib/ged/rna_ged_nx.py' 2023-11-28T12:22:48,412 adding 'rnaglib/kernels/__init__.py' 2023-11-28T12:22:48,416 adding 'rnaglib/kernels/node_sim.py' 2023-11-28T12:22:48,418 adding 'rnaglib/learning/__init__.py' 2023-11-28T12:22:48,420 adding 'rnaglib/learning/learn.py' 2023-11-28T12:22:48,422 adding 'rnaglib/learning/learning_utils.py' 2023-11-28T12:22:48,424 adding 'rnaglib/learning/models.py' 2023-11-28T12:22:48,426 adding 'rnaglib/prepare_data/__init__.py' 2023-11-28T12:22:48,428 adding 'rnaglib/prepare_data/annotations.py' 2023-11-28T12:22:48,429 adding 'rnaglib/prepare_data/chopper.py' 2023-11-28T12:22:48,431 adding 'rnaglib/prepare_data/describe_datasets.py' 2023-11-28T12:22:48,433 adding 'rnaglib/prepare_data/dssr_2_graphs.py' 2023-11-28T12:22:48,434 adding 'rnaglib/prepare_data/filters.py' 2023-11-28T12:22:48,436 adding 'rnaglib/prepare_data/fr3d_2_graphs.py' 2023-11-28T12:22:48,437 adding 'rnaglib/prepare_data/hash_check.py' 2023-11-28T12:22:48,439 adding 'rnaglib/prepare_data/khop_annotate.py' 2023-11-28T12:22:48,441 adding 'rnaglib/prepare_data/main.py' 2023-11-28T12:22:48,442 adding 'rnaglib/prepare_data/retrieve_structures.py' 2023-11-28T12:22:48,444 adding 'rnaglib/prepare_data/test.py' 2023-11-28T12:22:48,445 adding 'rnaglib/representations/__init__.py' 2023-11-28T12:22:48,447 adding 'rnaglib/representations/graph.py' 2023-11-28T12:22:48,448 adding 'rnaglib/representations/point_cloud.py' 2023-11-28T12:22:48,450 adding 'rnaglib/representations/representation.py' 2023-11-28T12:22:48,451 adding 'rnaglib/representations/rings.py' 2023-11-28T12:22:48,453 adding 'rnaglib/representations/voxel.py' 2023-11-28T12:22:48,455 adding 'rnaglib/utils/__init__.py' 2023-11-28T12:22:48,457 adding 'rnaglib/utils/feature_maps.py' 2023-11-28T12:22:48,459 adding 'rnaglib/utils/graph_io.py' 2023-11-28T12:22:48,462 adding 'rnaglib/utils/graph_utils.py' 2023-11-28T12:22:48,465 adding 'rnaglib/utils/graphlet_hash.py' 2023-11-28T12:22:48,466 adding 'rnaglib/utils/misc.py' 2023-11-28T12:22:48,468 adding 'rnaglib-2.0.10.dist-info/LICENSE' 2023-11-28T12:22:48,470 adding 'rnaglib-2.0.10.dist-info/METADATA' 2023-11-28T12:22:48,471 adding 'rnaglib-2.0.10.dist-info/WHEEL' 2023-11-28T12:22:48,472 adding 'rnaglib-2.0.10.dist-info/entry_points.txt' 2023-11-28T12:22:48,473 adding 'rnaglib-2.0.10.dist-info/top_level.txt' 2023-11-28T12:22:48,475 adding 'rnaglib-2.0.10.dist-info/RECORD' 2023-11-28T12:22:48,478 removing build/bdist.linux-aarch64/wheel 2023-11-28T12:22:48,620 Building wheel for rnaglib (pyproject.toml): finished with status 'done' 2023-11-28T12:22:48,629 Created wheel for rnaglib: filename=rnaglib-2.0.10-py3-none-any.whl size=134709 sha256=4d1fda984379f433682d8ba954068609e117cba94eb29d8bed186151abb6220a 2023-11-28T12:22:48,631 Stored in directory: /tmp/pip-ephem-wheel-cache-ky1f6mx_/wheels/a9/d4/e6/481adda03d1dd6be1f303cb0f3fb7b27aee6de9c11cc5c38d6 2023-11-28T12:22:48,644 Successfully built rnaglib 2023-11-28T12:22:48,651 Removed build tracker: '/tmp/pip-build-tracker-gdw3g8k1'