2023-11-29T11:08:26,030 Created temporary directory: /tmp/pip-build-tracker-rtab9cmi 2023-11-29T11:08:26,032 Initialized build tracking at /tmp/pip-build-tracker-rtab9cmi 2023-11-29T11:08:26,032 Created build tracker: /tmp/pip-build-tracker-rtab9cmi 2023-11-29T11:08:26,033 Entered build tracker: /tmp/pip-build-tracker-rtab9cmi 2023-11-29T11:08:26,033 Created temporary directory: /tmp/pip-wheel-hkr1chhg 2023-11-29T11:08:26,037 Created temporary directory: /tmp/pip-ephem-wheel-cache-5m4yu0k5 2023-11-29T11:08:26,063 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-29T11:08:26,067 2 location(s) to search for versions of kegg2bipartitegraph: 2023-11-29T11:08:26,067 * https://pypi.org/simple/kegg2bipartitegraph/ 2023-11-29T11:08:26,067 * https://www.piwheels.org/simple/kegg2bipartitegraph/ 2023-11-29T11:08:26,068 Fetching project page and analyzing links: https://pypi.org/simple/kegg2bipartitegraph/ 2023-11-29T11:08:26,069 Getting page https://pypi.org/simple/kegg2bipartitegraph/ 2023-11-29T11:08:26,070 Found index url https://pypi.org/simple/ 2023-11-29T11:08:26,281 Fetched page https://pypi.org/simple/kegg2bipartitegraph/ as application/vnd.pypi.simple.v1+json 2023-11-29T11:08:26,283 Skipping link: No binaries permitted for kegg2bipartitegraph: https://files.pythonhosted.org/packages/fa/f0/7c8a7cd8544284dc2b5f429bdb7ad1220023dc005df0ca98b6b90f681fed/kegg2bipartitegraph-0.0.1-py3-none-any.whl (from https://pypi.org/simple/kegg2bipartitegraph/) 2023-11-29T11:08:26,284 Found link https://files.pythonhosted.org/packages/e0/76/6dbe69ef48e5d079046fd2ef16183d5c1184ff5632824a5661f3568a2297/kegg2bipartitegraph-0.0.1.tar.gz (from https://pypi.org/simple/kegg2bipartitegraph/), version: 0.0.1 2023-11-29T11:08:26,284 Skipping link: No binaries permitted for kegg2bipartitegraph: https://files.pythonhosted.org/packages/99/98/c5d310cda928afb8c4c99faa27b3183a90dc5ae5481100c03ca9927132e3/kegg2bipartitegraph-0.0.2-py3-none-any.whl (from https://pypi.org/simple/kegg2bipartitegraph/) 2023-11-29T11:08:26,285 Found link https://files.pythonhosted.org/packages/1d/fe/0d208ef21ffff0d1e05ed2ea1e6a1c383f8203c98caa923d76bc98c415b5/kegg2bipartitegraph-0.0.2.tar.gz (from https://pypi.org/simple/kegg2bipartitegraph/), version: 0.0.2 2023-11-29T11:08:26,286 Fetching project page and analyzing links: https://www.piwheels.org/simple/kegg2bipartitegraph/ 2023-11-29T11:08:26,287 Getting page https://www.piwheels.org/simple/kegg2bipartitegraph/ 2023-11-29T11:08:26,288 Found index url https://www.piwheels.org/simple/ 2023-11-29T11:08:26,443 Fetched page https://www.piwheels.org/simple/kegg2bipartitegraph/ as text/html 2023-11-29T11:08:26,445 Skipping link: not a file: https://www.piwheels.org/simple/kegg2bipartitegraph/ 2023-11-29T11:08:26,445 Skipping link: not a file: https://pypi.org/simple/kegg2bipartitegraph/ 2023-11-29T11:08:26,465 Given no hashes to check 1 links for project 'kegg2bipartitegraph': discarding no candidates 2023-11-29T11:08:26,485 Collecting kegg2bipartitegraph==0.0.1 2023-11-29T11:08:26,488 Created temporary directory: /tmp/pip-unpack-o1zb49cl 2023-11-29T11:08:26,704 Downloading kegg2bipartitegraph-0.0.1.tar.gz (1.8 MB) 2023-11-29T11:08:27,536 Added kegg2bipartitegraph==0.0.1 from https://files.pythonhosted.org/packages/e0/76/6dbe69ef48e5d079046fd2ef16183d5c1184ff5632824a5661f3568a2297/kegg2bipartitegraph-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-rtab9cmi' 2023-11-29T11:08:27,538 Running setup.py (path:/tmp/pip-wheel-hkr1chhg/kegg2bipartitegraph_8e3d8df4bc0e45e3bb8967cadf6989ce/setup.py) egg_info for package kegg2bipartitegraph 2023-11-29T11:08:27,539 Created temporary directory: /tmp/pip-pip-egg-info-j5e2lp4o 2023-11-29T11:08:27,540 Preparing metadata (setup.py): started 2023-11-29T11:08:27,541 Running command python setup.py egg_info 2023-11-29T11:08:28,038 No `name` configuration, performing automatic discovery 2023-11-29T11:08:28,635 running egg_info 2023-11-29T11:08:28,637 creating /tmp/pip-pip-egg-info-j5e2lp4o/kegg2bipartitegraph.egg-info 2023-11-29T11:08:28,664 writing /tmp/pip-pip-egg-info-j5e2lp4o/kegg2bipartitegraph.egg-info/PKG-INFO 2023-11-29T11:08:28,668 writing dependency_links to /tmp/pip-pip-egg-info-j5e2lp4o/kegg2bipartitegraph.egg-info/dependency_links.txt 2023-11-29T11:08:28,670 writing entry points to /tmp/pip-pip-egg-info-j5e2lp4o/kegg2bipartitegraph.egg-info/entry_points.txt 2023-11-29T11:08:28,671 writing requirements to /tmp/pip-pip-egg-info-j5e2lp4o/kegg2bipartitegraph.egg-info/requires.txt 2023-11-29T11:08:28,673 writing top-level names to /tmp/pip-pip-egg-info-j5e2lp4o/kegg2bipartitegraph.egg-info/top_level.txt 2023-11-29T11:08:28,674 writing manifest file '/tmp/pip-pip-egg-info-j5e2lp4o/kegg2bipartitegraph.egg-info/SOURCES.txt' 2023-11-29T11:08:28,766 reading manifest file '/tmp/pip-pip-egg-info-j5e2lp4o/kegg2bipartitegraph.egg-info/SOURCES.txt' 2023-11-29T11:08:28,768 adding license file 'LICENSE' 2023-11-29T11:08:28,771 writing manifest file '/tmp/pip-pip-egg-info-j5e2lp4o/kegg2bipartitegraph.egg-info/SOURCES.txt' 2023-11-29T11:08:28,880 Preparing metadata (setup.py): finished with status 'done' 2023-11-29T11:08:28,884 Source in /tmp/pip-wheel-hkr1chhg/kegg2bipartitegraph_8e3d8df4bc0e45e3bb8967cadf6989ce has version 0.0.1, which satisfies requirement kegg2bipartitegraph==0.0.1 from https://files.pythonhosted.org/packages/e0/76/6dbe69ef48e5d079046fd2ef16183d5c1184ff5632824a5661f3568a2297/kegg2bipartitegraph-0.0.1.tar.gz 2023-11-29T11:08:28,886 Removed kegg2bipartitegraph==0.0.1 from https://files.pythonhosted.org/packages/e0/76/6dbe69ef48e5d079046fd2ef16183d5c1184ff5632824a5661f3568a2297/kegg2bipartitegraph-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-rtab9cmi' 2023-11-29T11:08:28,891 Created temporary directory: /tmp/pip-unpack-sm9047yr 2023-11-29T11:08:28,892 Created temporary directory: /tmp/pip-unpack-jeiaq2us 2023-11-29T11:08:28,898 Building wheels for collected packages: kegg2bipartitegraph 2023-11-29T11:08:28,903 Created temporary directory: /tmp/pip-wheel-t8a_0tki 2023-11-29T11:08:28,904 Building wheel for kegg2bipartitegraph (setup.py): started 2023-11-29T11:08:28,905 Destination directory: /tmp/pip-wheel-t8a_0tki 2023-11-29T11:08:28,906 Running command python setup.py bdist_wheel 2023-11-29T11:08:29,380 No `name` configuration, performing automatic discovery 2023-11-29T11:08:29,961 running bdist_wheel 2023-11-29T11:08:30,062 running build 2023-11-29T11:08:30,063 running build_py 2023-11-29T11:08:30,092 creating build 2023-11-29T11:08:30,092 creating build/lib 2023-11-29T11:08:30,093 creating build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,095 copying kegg2bipartitegraph/graph.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,097 copying kegg2bipartitegraph/__init__.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,098 copying kegg2bipartitegraph/__main__.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,101 copying kegg2bipartitegraph/sbml.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,103 copying kegg2bipartitegraph/utils.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,105 copying kegg2bipartitegraph/reference.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,109 copying kegg2bipartitegraph/kofamkoala.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,111 copying kegg2bipartitegraph/eggnog.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,114 copying kegg2bipartitegraph/esmecata.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,117 copying kegg2bipartitegraph/organism.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,119 copying kegg2bipartitegraph/scope.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,121 copying kegg2bipartitegraph/mapping.py -> build/lib/kegg2bipartitegraph 2023-11-29T11:08:30,129 creating build/lib/kegg2bipartitegraph/data 2023-11-29T11:08:30,130 creating build/lib/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,131 copying kegg2bipartitegraph/data/kegg_model/kegg_modules.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,135 copying kegg2bipartitegraph/data/kegg_model/kegg_mapping.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,143 copying kegg2bipartitegraph/data/kegg_model/kegg_pathways.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,163 copying kegg2bipartitegraph/data/kegg_model/kegg_removed_changed_reaction.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,168 copying kegg2bipartitegraph/data/kegg_model/kegg_compound_name.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,187 copying kegg2bipartitegraph/data/kegg_model/kegg_metadata.json -> build/lib/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,189 copying kegg2bipartitegraph/data/kegg_model/kegg_model.sbml -> build/lib/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,376 copying kegg2bipartitegraph/data/kegg_model/kegg_model.graphml -> build/lib/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,444 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-11-29T11:08:30,445 !! 2023-11-29T11:08:30,446 ******************************************************************************** 2023-11-29T11:08:30,446 Please avoid running ``setup.py`` directly. 2023-11-29T11:08:30,447 Instead, use pypa/build, pypa/installer or other 2023-11-29T11:08:30,448 standards-based tools. 2023-11-29T11:08:30,449 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-11-29T11:08:30,449 ******************************************************************************** 2023-11-29T11:08:30,450 !! 2023-11-29T11:08:30,451 self.initialize_options() 2023-11-29T11:08:30,474 installing to build/bdist.linux-aarch64/wheel 2023-11-29T11:08:30,475 running install 2023-11-29T11:08:30,499 running install_lib 2023-11-29T11:08:30,524 creating build/bdist.linux-aarch64 2023-11-29T11:08:30,525 creating build/bdist.linux-aarch64/wheel 2023-11-29T11:08:30,527 creating build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,528 copying build/lib/kegg2bipartitegraph/graph.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,537 copying build/lib/kegg2bipartitegraph/__init__.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,538 copying build/lib/kegg2bipartitegraph/__main__.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,541 copying build/lib/kegg2bipartitegraph/sbml.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,543 copying build/lib/kegg2bipartitegraph/utils.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,546 copying build/lib/kegg2bipartitegraph/reference.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,549 creating build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data 2023-11-29T11:08:30,551 creating build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,552 copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_modules.tsv -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,559 copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_mapping.tsv -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,566 copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_model.graphml -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,599 copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_model.sbml -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,851 copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_pathways.tsv -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,867 copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_removed_changed_reaction.tsv -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,871 copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_compound_name.tsv -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,890 copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_metadata.json -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph/data/kegg_model 2023-11-29T11:08:30,892 copying build/lib/kegg2bipartitegraph/kofamkoala.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,895 copying build/lib/kegg2bipartitegraph/eggnog.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,897 copying build/lib/kegg2bipartitegraph/esmecata.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,900 copying build/lib/kegg2bipartitegraph/organism.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,902 copying build/lib/kegg2bipartitegraph/scope.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,905 copying build/lib/kegg2bipartitegraph/mapping.py -> build/bdist.linux-aarch64/wheel/kegg2bipartitegraph 2023-11-29T11:08:30,907 running install_egg_info 2023-11-29T11:08:30,971 running egg_info 2023-11-29T11:08:30,997 writing kegg2bipartitegraph.egg-info/PKG-INFO 2023-11-29T11:08:31,000 writing dependency_links to kegg2bipartitegraph.egg-info/dependency_links.txt 2023-11-29T11:08:31,002 writing entry points to kegg2bipartitegraph.egg-info/entry_points.txt 2023-11-29T11:08:31,003 writing requirements to kegg2bipartitegraph.egg-info/requires.txt 2023-11-29T11:08:31,004 writing top-level names to kegg2bipartitegraph.egg-info/top_level.txt 2023-11-29T11:08:31,036 reading manifest file 'kegg2bipartitegraph.egg-info/SOURCES.txt' 2023-11-29T11:08:31,039 adding license file 'LICENSE' 2023-11-29T11:08:31,042 writing manifest file 'kegg2bipartitegraph.egg-info/SOURCES.txt' 2023-11-29T11:08:31,044 Copying kegg2bipartitegraph.egg-info to build/bdist.linux-aarch64/wheel/kegg2bipartitegraph-0.0.1-py3.11.egg-info 2023-11-29T11:08:31,055 running install_scripts 2023-11-29T11:08:31,073 creating build/bdist.linux-aarch64/wheel/kegg2bipartitegraph-0.0.1.dist-info/WHEEL 2023-11-29T11:08:31,075 creating '/tmp/pip-wheel-t8a_0tki/kegg2bipartitegraph-0.0.1-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it 2023-11-29T11:08:31,078 adding 'kegg2bipartitegraph/__init__.py' 2023-11-29T11:08:31,080 adding 'kegg2bipartitegraph/__main__.py' 2023-11-29T11:08:31,082 adding 'kegg2bipartitegraph/eggnog.py' 2023-11-29T11:08:31,085 adding 'kegg2bipartitegraph/esmecata.py' 2023-11-29T11:08:31,086 adding 'kegg2bipartitegraph/graph.py' 2023-11-29T11:08:31,088 adding 'kegg2bipartitegraph/kofamkoala.py' 2023-11-29T11:08:31,090 adding 'kegg2bipartitegraph/mapping.py' 2023-11-29T11:08:31,092 adding 'kegg2bipartitegraph/organism.py' 2023-11-29T11:08:31,096 adding 'kegg2bipartitegraph/reference.py' 2023-11-29T11:08:31,098 adding 'kegg2bipartitegraph/sbml.py' 2023-11-29T11:08:31,099 adding 'kegg2bipartitegraph/scope.py' 2023-11-29T11:08:31,101 adding 'kegg2bipartitegraph/utils.py' 2023-11-29T11:08:31,250 adding 'kegg2bipartitegraph/data/kegg_model/kegg_compound_name.tsv' 2023-11-29T11:08:31,344 adding 'kegg2bipartitegraph/data/kegg_model/kegg_mapping.tsv' 2023-11-29T11:08:31,347 adding 'kegg2bipartitegraph/data/kegg_model/kegg_metadata.json' 2023-11-29T11:08:31,490 adding 'kegg2bipartitegraph/data/kegg_model/kegg_model.graphml' 2023-11-29T11:08:31,994 adding 'kegg2bipartitegraph/data/kegg_model/kegg_model.sbml' 2023-11-29T11:08:32,094 adding 'kegg2bipartitegraph/data/kegg_model/kegg_modules.tsv' 2023-11-29T11:08:32,275 adding 'kegg2bipartitegraph/data/kegg_model/kegg_pathways.tsv' 2023-11-29T11:08:32,288 adding 'kegg2bipartitegraph/data/kegg_model/kegg_removed_changed_reaction.tsv' 2023-11-29T11:08:32,296 adding 'kegg2bipartitegraph-0.0.1.dist-info/LICENSE' 2023-11-29T11:08:32,298 adding 'kegg2bipartitegraph-0.0.1.dist-info/METADATA' 2023-11-29T11:08:32,299 adding 'kegg2bipartitegraph-0.0.1.dist-info/WHEEL' 2023-11-29T11:08:32,300 adding 'kegg2bipartitegraph-0.0.1.dist-info/entry_points.txt' 2023-11-29T11:08:32,301 adding 'kegg2bipartitegraph-0.0.1.dist-info/top_level.txt' 2023-11-29T11:08:32,302 adding 'kegg2bipartitegraph-0.0.1.dist-info/RECORD' 2023-11-29T11:08:32,326 removing build/bdist.linux-aarch64/wheel 2023-11-29T11:08:32,458 Building wheel for kegg2bipartitegraph (setup.py): finished with status 'done' 2023-11-29T11:08:32,476 Created wheel for kegg2bipartitegraph: filename=kegg2bipartitegraph-0.0.1-py3-none-any.whl size=1858129 sha256=928d8c7b74855e7631502f233b4e879b375ef89ac1f0cd32703636ee675360fd 2023-11-29T11:08:32,478 Stored in directory: /tmp/pip-ephem-wheel-cache-5m4yu0k5/wheels/08/b0/c4/719e76adf4f2d168067e95d972d7b7db96529995a1b305e80d 2023-11-29T11:08:32,492 Successfully built kegg2bipartitegraph 2023-11-29T11:08:32,549 Removed build tracker: '/tmp/pip-build-tracker-rtab9cmi'