2023-11-29T14:50:53,840 Created temporary directory: /tmp/pip-build-tracker-hnc9w8tb 2023-11-29T14:50:53,841 Initialized build tracking at /tmp/pip-build-tracker-hnc9w8tb 2023-11-29T14:50:53,842 Created build tracker: /tmp/pip-build-tracker-hnc9w8tb 2023-11-29T14:50:53,842 Entered build tracker: /tmp/pip-build-tracker-hnc9w8tb 2023-11-29T14:50:53,843 Created temporary directory: /tmp/pip-wheel-g4z68aq7 2023-11-29T14:50:53,847 Created temporary directory: /tmp/pip-ephem-wheel-cache-3lvu8wc5 2023-11-29T14:50:53,870 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-29T14:50:53,874 2 location(s) to search for versions of bluepyemodel: 2023-11-29T14:50:53,874 * https://pypi.org/simple/bluepyemodel/ 2023-11-29T14:50:53,874 * https://www.piwheels.org/simple/bluepyemodel/ 2023-11-29T14:50:53,875 Fetching project page and analyzing links: https://pypi.org/simple/bluepyemodel/ 2023-11-29T14:50:53,876 Getting page https://pypi.org/simple/bluepyemodel/ 2023-11-29T14:50:53,877 Found index url https://pypi.org/simple/ 2023-11-29T14:50:54,089 Fetched page https://pypi.org/simple/bluepyemodel/ as application/vnd.pypi.simple.v1+json 2023-11-29T14:50:54,107 Skipping link: No binaries permitted for bluepyemodel: https://files.pythonhosted.org/packages/77/ae/9e95ea0862330f97262af1bbd4317f66be2f17c82edf0a0c990552195635/bluepyemodel-0.0.16-py3-none-any.whl (from https://pypi.org/simple/bluepyemodel/) 2023-11-29T14:50:54,108 Found link https://files.pythonhosted.org/packages/4e/bf/b26fd0e56561c6d04a5b8ddc69939b8302f33583126137055fa6e7a93a0a/bluepyemodel-0.0.16.tar.gz (from https://pypi.org/simple/bluepyemodel/), version: 0.0.16 2023-11-29T14:50:54,109 Skipping link: No binaries permitted for bluepyemodel: https://files.pythonhosted.org/packages/44/fd/556856c23025b90629675089e6058238fe2723b52a34b2ceabd04403e3c6/bluepyemodel-0.0.17-py3-none-any.whl (from https://pypi.org/simple/bluepyemodel/) 2023-11-29T14:50:54,110 Found link 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https://www.piwheels.org/simple/bluepyemodel/bluepyemodel-0.0.18-py3-none-any.whl#sha256=e68f07045a6a72865a8664f7d53d43b4abb3f2f4d35f6cfe9ba685acf6fdecb0 (from https://www.piwheels.org/simple/bluepyemodel/) 2023-11-29T14:50:54,373 Skipping link: No binaries permitted for bluepyemodel: https://www.piwheels.org/simple/bluepyemodel/bluepyemodel-0.0.17-py3-none-any.whl#sha256=75abc5c8573218e8036c6e4bf436fa090d127a7e30d853310c7134eeac3ba6e8 (from https://www.piwheels.org/simple/bluepyemodel/) 2023-11-29T14:50:54,373 Skipping link: No binaries permitted for bluepyemodel: https://www.piwheels.org/simple/bluepyemodel/bluepyemodel-0.0.16-py3-none-any.whl#sha256=1320b98733e0bc6ad9ce13b5dd897b4bc81267c1b828fb41ef6efc85571130d0 (from https://www.piwheels.org/simple/bluepyemodel/) 2023-11-29T14:50:54,375 Skipping link: not a file: https://www.piwheels.org/simple/bluepyemodel/ 2023-11-29T14:50:54,375 Skipping link: not a file: https://pypi.org/simple/bluepyemodel/ 2023-11-29T14:50:54,401 Given no hashes to check 1 links for project 'bluepyemodel': discarding no candidates 2023-11-29T14:50:54,420 Collecting bluepyemodel==0.0.64 2023-11-29T14:50:54,423 Created temporary directory: /tmp/pip-unpack-8_sz7ugq 2023-11-29T14:50:54,897 Downloading bluepyemodel-0.0.64.tar.gz (13.0 MB) 2023-11-29T14:51:00,281 Added bluepyemodel==0.0.64 from https://files.pythonhosted.org/packages/68/a9/c404850fad5d24106c6e83f9ac517f37bc0e56202258c3938f74a3be8c7d/bluepyemodel-0.0.64.tar.gz to build tracker '/tmp/pip-build-tracker-hnc9w8tb' 2023-11-29T14:51:00,284 Running setup.py (path:/tmp/pip-wheel-g4z68aq7/bluepyemodel_1aa7872bfffd4bfdae1f239a2f42e84d/setup.py) egg_info for package bluepyemodel 2023-11-29T14:51:00,285 Created temporary directory: /tmp/pip-pip-egg-info-y5rp3d66 2023-11-29T14:51:00,285 Preparing metadata (setup.py): started 2023-11-29T14:51:00,287 Running command python setup.py egg_info 2023-11-29T14:51:00,743 /tmp/pip-wheel-g4z68aq7/bluepyemodel_1aa7872bfffd4bfdae1f239a2f42e84d/setup.py:19: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses 2023-11-29T14:51:00,744 import imp 2023-11-29T14:51:01,042 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-11-29T14:51:01,042 !! 2023-11-29T14:51:01,043 ******************************************************************************** 2023-11-29T14:51:01,044 Requirements should be satisfied by a PEP 517 installer. 2023-11-29T14:51:01,044 If you are using pip, you can try `pip install --use-pep517`. 2023-11-29T14:51:01,045 ******************************************************************************** 2023-11-29T14:51:01,046 !! 2023-11-29T14:51:01,047 dist.fetch_build_eggs(dist.setup_requires) 2023-11-29T14:51:04,342 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2023-11-29T14:51:04,454 running egg_info 2023-11-29T14:51:04,456 creating /tmp/pip-pip-egg-info-y5rp3d66/bluepyemodel.egg-info 2023-11-29T14:51:04,484 writing /tmp/pip-pip-egg-info-y5rp3d66/bluepyemodel.egg-info/PKG-INFO 2023-11-29T14:51:04,494 writing dependency_links to /tmp/pip-pip-egg-info-y5rp3d66/bluepyemodel.egg-info/dependency_links.txt 2023-11-29T14:51:04,499 writing requirements to /tmp/pip-pip-egg-info-y5rp3d66/bluepyemodel.egg-info/requires.txt 2023-11-29T14:51:04,501 writing top-level names to /tmp/pip-pip-egg-info-y5rp3d66/bluepyemodel.egg-info/top_level.txt 2023-11-29T14:51:04,502 writing manifest file '/tmp/pip-pip-egg-info-y5rp3d66/bluepyemodel.egg-info/SOURCES.txt' 2023-11-29T14:51:04,706 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-11-29T14:51:04,713 reading manifest file '/tmp/pip-pip-egg-info-y5rp3d66/bluepyemodel.egg-info/SOURCES.txt' 2023-11-29T14:51:04,715 reading manifest template 'MANIFEST.in' 2023-11-29T14:51:04,716 adding license file 'LICENSE.txt' 2023-11-29T14:51:04,717 adding license file 'COPYING' 2023-11-29T14:51:04,717 adding license file 'AUTHORS.txt' 2023-11-29T14:51:04,721 writing manifest file '/tmp/pip-pip-egg-info-y5rp3d66/bluepyemodel.egg-info/SOURCES.txt' 2023-11-29T14:51:04,839 Preparing metadata (setup.py): finished with status 'done' 2023-11-29T14:51:04,843 Source in /tmp/pip-wheel-g4z68aq7/bluepyemodel_1aa7872bfffd4bfdae1f239a2f42e84d has version 0.0.64, which satisfies requirement bluepyemodel==0.0.64 from https://files.pythonhosted.org/packages/68/a9/c404850fad5d24106c6e83f9ac517f37bc0e56202258c3938f74a3be8c7d/bluepyemodel-0.0.64.tar.gz 2023-11-29T14:51:04,844 Removed bluepyemodel==0.0.64 from https://files.pythonhosted.org/packages/68/a9/c404850fad5d24106c6e83f9ac517f37bc0e56202258c3938f74a3be8c7d/bluepyemodel-0.0.64.tar.gz from build tracker '/tmp/pip-build-tracker-hnc9w8tb' 2023-11-29T14:51:04,850 Created temporary directory: /tmp/pip-unpack-c82lerd5 2023-11-29T14:51:04,852 Created temporary directory: /tmp/pip-unpack-i3hlqwzg 2023-11-29T14:51:04,911 Building wheels for collected packages: bluepyemodel 2023-11-29T14:51:04,916 Created temporary directory: /tmp/pip-wheel-5tm5d2db 2023-11-29T14:51:04,916 Building wheel for bluepyemodel (setup.py): started 2023-11-29T14:51:04,918 Destination directory: /tmp/pip-wheel-5tm5d2db 2023-11-29T14:51:04,918 Running command python setup.py bdist_wheel 2023-11-29T14:51:05,353 /tmp/pip-wheel-g4z68aq7/bluepyemodel_1aa7872bfffd4bfdae1f239a2f42e84d/setup.py:19: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses 2023-11-29T14:51:05,353 import imp 2023-11-29T14:51:05,650 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2023-11-29T14:51:05,651 !! 2023-11-29T14:51:05,652 ******************************************************************************** 2023-11-29T14:51:05,652 Requirements should be satisfied by a PEP 517 installer. 2023-11-29T14:51:05,653 If you are using pip, you can try `pip install --use-pep517`. 2023-11-29T14:51:05,653 ******************************************************************************** 2023-11-29T14:51:05,654 !! 2023-11-29T14:51:05,654 dist.fetch_build_eggs(dist.setup_requires) 2023-11-29T14:51:06,205 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2023-11-29T14:51:06,308 running bdist_wheel 2023-11-29T14:51:06,424 running build 2023-11-29T14:51:06,425 running build_py 2023-11-29T14:51:06,458 creating build 2023-11-29T14:51:06,459 creating build/lib 2023-11-29T14:51:06,460 creating build/lib/tests 2023-11-29T14:51:06,461 copying tests/__init__.py -> build/lib/tests 2023-11-29T14:51:06,464 creating build/lib/bluepyemodel 2023-11-29T14:51:06,464 copying bluepyemodel/__init__.py -> build/lib/bluepyemodel 2023-11-29T14:51:06,467 creating build/lib/tests/unit_tests 2023-11-29T14:51:06,468 copying tests/unit_tests/test_local_access_point.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,470 copying tests/unit_tests/test_evaluator.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,473 copying tests/unit_tests/test_optimisation.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,475 copying tests/unit_tests/test_model_parameters_configuration.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,477 copying tests/unit_tests/__init__.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,479 copying tests/unit_tests/test_validation_functions.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,481 copying tests/unit_tests/test_model.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,483 copying tests/unit_tests/test_tools.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,485 copying tests/unit_tests/test_emodelmetadata.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,487 copying tests/unit_tests/test_targets_configuration.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,489 copying tests/unit_tests/test_fitness_calculator_configuration.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,492 copying tests/unit_tests/test_plotting.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,494 copying tests/unit_tests/test_ecodes.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,497 copying tests/unit_tests/test_emodel_pipeline.py -> build/lib/tests/unit_tests 2023-11-29T14:51:06,499 creating build/lib/tests/test_models 2023-11-29T14:51:06,500 copying tests/test_models/dummycells.py -> build/lib/tests/test_models 2023-11-29T14:51:06,502 copying tests/test_models/__init__.py -> build/lib/tests/test_models 2023-11-29T14:51:06,505 creating build/lib/tests/functional_tests 2023-11-29T14:51:06,506 copying tests/functional_tests/__init__.py -> build/lib/tests/functional_tests 2023-11-29T14:51:06,508 copying tests/functional_tests/test_validation.py -> build/lib/tests/functional_tests 2023-11-29T14:51:06,510 copying tests/functional_tests/test_protocols.py -> build/lib/tests/functional_tests 2023-11-29T14:51:06,512 creating build/lib/bluepyemodel/emodel_pipeline 2023-11-29T14:51:06,513 copying bluepyemodel/emodel_pipeline/plotting.py -> build/lib/bluepyemodel/emodel_pipeline 2023-11-29T14:51:06,517 copying bluepyemodel/emodel_pipeline/__init__.py -> build/lib/bluepyemodel/emodel_pipeline 2023-11-29T14:51:06,519 copying bluepyemodel/emodel_pipeline/emodel_settings.py -> build/lib/bluepyemodel/emodel_pipeline 2023-11-29T14:51:06,522 copying bluepyemodel/emodel_pipeline/emodel_workflow.py -> build/lib/bluepyemodel/emodel_pipeline 2023-11-29T14:51:06,524 copying bluepyemodel/emodel_pipeline/emodel_script.py -> build/lib/bluepyemodel/emodel_pipeline 2023-11-29T14:51:06,526 copying bluepyemodel/emodel_pipeline/emodel_pipeline.py -> build/lib/bluepyemodel/emodel_pipeline 2023-11-29T14:51:06,529 copying bluepyemodel/emodel_pipeline/emodel.py -> build/lib/bluepyemodel/emodel_pipeline 2023-11-29T14:51:06,531 copying bluepyemodel/emodel_pipeline/emodel_metadata.py -> build/lib/bluepyemodel/emodel_pipeline 2023-11-29T14:51:06,534 creating build/lib/bluepyemodel/export_emodel 2023-11-29T14:51:06,535 copying bluepyemodel/export_emodel/__init__.py -> build/lib/bluepyemodel/export_emodel 2023-11-29T14:51:06,536 copying bluepyemodel/export_emodel/utils.py -> build/lib/bluepyemodel/export_emodel 2023-11-29T14:51:06,538 copying bluepyemodel/export_emodel/export_emodel.py -> build/lib/bluepyemodel/export_emodel 2023-11-29T14:51:06,541 creating build/lib/bluepyemodel/optimisation 2023-11-29T14:51:06,542 copying bluepyemodel/optimisation/optimisation.py -> build/lib/bluepyemodel/optimisation 2023-11-29T14:51:06,545 copying bluepyemodel/optimisation/__init__.py -> build/lib/bluepyemodel/optimisation 2023-11-29T14:51:06,547 creating build/lib/bluepyemodel/model 2023-11-29T14:51:06,548 copying bluepyemodel/model/neuron_model_configuration.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,551 copying bluepyemodel/model/distribution_configuration.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,553 copying bluepyemodel/model/parameter_configuration.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,555 copying bluepyemodel/model/model_configurator.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,557 copying bluepyemodel/model/__init__.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,559 copying bluepyemodel/model/morphology_configuration.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,561 copying bluepyemodel/model/utils.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,563 copying bluepyemodel/model/model_configuration.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,565 copying bluepyemodel/model/mechanism_configuration.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,567 copying bluepyemodel/model/model.py -> build/lib/bluepyemodel/model 2023-11-29T14:51:06,570 creating build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,571 copying bluepyemodel/evaluation/recordings.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,574 copying bluepyemodel/evaluation/__init__.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,576 copying bluepyemodel/evaluation/evaluation.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,579 copying bluepyemodel/evaluation/modifiers.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,582 copying bluepyemodel/evaluation/efel_feature_bpem.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,585 copying bluepyemodel/evaluation/efeature_configuration.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,587 copying bluepyemodel/evaluation/protocols.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,590 copying bluepyemodel/evaluation/fitness_calculator_configuration.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,593 copying bluepyemodel/evaluation/evaluator.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,596 copying bluepyemodel/evaluation/protocol_configuration.py -> build/lib/bluepyemodel/evaluation 2023-11-29T14:51:06,599 creating build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,601 copying bluepyemodel/ecode/poscheops.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,603 copying bluepyemodel/ecode/noiseou3.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,605 copying bluepyemodel/ecode/firepattern.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,607 copying bluepyemodel/ecode/__init__.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,609 copying bluepyemodel/ecode/apwaveform.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,611 copying bluepyemodel/ecode/iv.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,613 copying bluepyemodel/ecode/random_square_inputs.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,616 copying bluepyemodel/ecode/stimulus.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,618 copying bluepyemodel/ecode/sahp.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,620 copying bluepyemodel/ecode/dendrite.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,622 copying bluepyemodel/ecode/ramp.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,625 copying bluepyemodel/ecode/noise.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,627 copying bluepyemodel/ecode/probampanmda_ems.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,629 copying bluepyemodel/ecode/whitenoise.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,631 copying bluepyemodel/ecode/spikerec.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,634 copying bluepyemodel/ecode/hyperdepol.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,636 copying bluepyemodel/ecode/dehyperpol.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,638 copying bluepyemodel/ecode/comb.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,641 copying bluepyemodel/ecode/customfromfile.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,643 copying bluepyemodel/ecode/idrest.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,645 copying bluepyemodel/ecode/subwhitenoise.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,647 copying bluepyemodel/ecode/negcheops.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,649 copying bluepyemodel/ecode/sinespec.py -> build/lib/bluepyemodel/ecode 2023-11-29T14:51:06,652 creating build/lib/bluepyemodel/efeatures_extraction 2023-11-29T14:51:06,653 copying bluepyemodel/efeatures_extraction/targets_configurator.py -> build/lib/bluepyemodel/efeatures_extraction 2023-11-29T14:51:06,656 copying bluepyemodel/efeatures_extraction/__init__.py -> build/lib/bluepyemodel/efeatures_extraction 2023-11-29T14:51:06,658 copying bluepyemodel/efeatures_extraction/trace_file.py -> build/lib/bluepyemodel/efeatures_extraction 2023-11-29T14:51:06,660 copying bluepyemodel/efeatures_extraction/auto_targets.py -> build/lib/bluepyemodel/efeatures_extraction 2023-11-29T14:51:06,662 copying bluepyemodel/efeatures_extraction/targets_configuration.py -> build/lib/bluepyemodel/efeatures_extraction 2023-11-29T14:51:06,665 copying bluepyemodel/efeatures_extraction/efeatures_extraction.py -> build/lib/bluepyemodel/efeatures_extraction 2023-11-29T14:51:06,667 copying bluepyemodel/efeatures_extraction/target.py -> build/lib/bluepyemodel/efeatures_extraction 2023-11-29T14:51:06,670 creating build/lib/bluepyemodel/access_point 2023-11-29T14:51:06,671 copying bluepyemodel/access_point/local.py -> build/lib/bluepyemodel/access_point 2023-11-29T14:51:06,675 copying bluepyemodel/access_point/__init__.py -> build/lib/bluepyemodel/access_point 2023-11-29T14:51:06,677 copying bluepyemodel/access_point/access_point.py -> build/lib/bluepyemodel/access_point 2023-11-29T14:51:06,680 creating build/lib/bluepyemodel/tools 2023-11-29T14:51:06,681 copying bluepyemodel/tools/__init__.py -> build/lib/bluepyemodel/tools 2023-11-29T14:51:06,683 copying bluepyemodel/tools/mechanisms.py -> build/lib/bluepyemodel/tools 2023-11-29T14:51:06,686 copying bluepyemodel/tools/utils.py -> build/lib/bluepyemodel/tools 2023-11-29T14:51:06,688 copying bluepyemodel/tools/search_pdfs.py -> build/lib/bluepyemodel/tools 2023-11-29T14:51:06,691 copying bluepyemodel/tools/multiprocessing.py -> build/lib/bluepyemodel/tools 2023-11-29T14:51:06,693 copying bluepyemodel/tools/morphology.py -> build/lib/bluepyemodel/tools 2023-11-29T14:51:06,696 creating build/lib/bluepyemodel/tasks 2023-11-29T14:51:06,697 copying bluepyemodel/tasks/__init__.py -> build/lib/bluepyemodel/tasks 2023-11-29T14:51:06,699 copying bluepyemodel/tasks/config.py -> build/lib/bluepyemodel/tasks 2023-11-29T14:51:06,701 copying bluepyemodel/tasks/luigi_tools.py -> build/lib/bluepyemodel/tasks 2023-11-29T14:51:06,704 copying bluepyemodel/tasks/luigi_custom.py -> build/lib/bluepyemodel/tasks 2023-11-29T14:51:06,707 creating build/lib/bluepyemodel/validation 2023-11-29T14:51:06,707 copying bluepyemodel/validation/validation_functions.py -> build/lib/bluepyemodel/validation 2023-11-29T14:51:06,710 copying bluepyemodel/validation/__init__.py -> build/lib/bluepyemodel/validation 2023-11-29T14:51:06,712 copying bluepyemodel/validation/validation.py -> build/lib/bluepyemodel/validation 2023-11-29T14:51:06,715 creating build/lib/bluepyemodel/tasks/emodel_creation 2023-11-29T14:51:06,716 copying bluepyemodel/tasks/emodel_creation/optimisation.py -> build/lib/bluepyemodel/tasks/emodel_creation 2023-11-29T14:51:06,720 copying bluepyemodel/tasks/emodel_creation/__init__.py -> build/lib/bluepyemodel/tasks/emodel_creation 2023-11-29T14:51:06,721 running egg_info 2023-11-29T14:51:06,779 writing bluepyemodel.egg-info/PKG-INFO 2023-11-29T14:51:06,789 writing dependency_links to bluepyemodel.egg-info/dependency_links.txt 2023-11-29T14:51:06,794 writing requirements to bluepyemodel.egg-info/requires.txt 2023-11-29T14:51:06,795 writing top-level names to bluepyemodel.egg-info/top_level.txt 2023-11-29T14:51:06,906 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2023-11-29T14:51:06,910 reading manifest file 'bluepyemodel.egg-info/SOURCES.txt' 2023-11-29T14:51:06,930 reading manifest template 'MANIFEST.in' 2023-11-29T14:51:06,931 adding license file 'LICENSE.txt' 2023-11-29T14:51:06,931 adding license file 'COPYING' 2023-11-29T14:51:06,932 adding license file 'AUTHORS.txt' 2023-11-29T14:51:06,940 writing manifest file 'bluepyemodel.egg-info/SOURCES.txt' 2023-11-29T14:51:06,944 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'bluepyemodel.ecode.data' is absent from the `packages` configuration. 2023-11-29T14:51:06,944 !! 2023-11-29T14:51:06,945 ******************************************************************************** 2023-11-29T14:51:06,946 ############################ 2023-11-29T14:51:06,947 # Package would be ignored # 2023-11-29T14:51:06,948 ############################ 2023-11-29T14:51:06,948 Python recognizes 'bluepyemodel.ecode.data' as an importable package[^1], 2023-11-29T14:51:06,949 but it is absent from setuptools' `packages` configuration. 2023-11-29T14:51:06,950 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-29T14:51:06,951 package, please make sure that 'bluepyemodel.ecode.data' is explicitly added 2023-11-29T14:51:06,952 to the `packages` configuration field. 2023-11-29T14:51:06,953 Alternatively, you can also rely on setuptools' discovery methods 2023-11-29T14:51:06,954 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-29T14:51:06,954 instead of `find_packages(...)`/`find:`). 2023-11-29T14:51:06,955 You can read more about "package discovery" on setuptools documentation page: 2023-11-29T14:51:06,957 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-29T14:51:06,958 If you don't want 'bluepyemodel.ecode.data' to be distributed and are 2023-11-29T14:51:06,958 already explicitly excluding 'bluepyemodel.ecode.data' via 2023-11-29T14:51:06,959 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-29T14:51:06,960 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-29T14:51:06,960 combination with a more fine grained `package-data` configuration. 2023-11-29T14:51:06,962 You can read more about "package data files" on setuptools documentation page: 2023-11-29T14:51:06,963 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-29T14:51:06,965 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-29T14:51:06,966 even if it does not contain any `.py` files. 2023-11-29T14:51:06,966 On the other hand, currently there is no concept of package data 2023-11-29T14:51:06,966 directory, all directories are treated like packages. 2023-11-29T14:51:06,967 ******************************************************************************** 2023-11-29T14:51:06,968 !! 2023-11-29T14:51:06,968 check.warn(importable) 2023-11-29T14:51:06,969 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'bluepyemodel.export_emodel.templates' is absent from the `packages` configuration. 2023-11-29T14:51:06,969 !! 2023-11-29T14:51:06,970 ******************************************************************************** 2023-11-29T14:51:06,971 ############################ 2023-11-29T14:51:06,971 # Package would be ignored # 2023-11-29T14:51:06,972 ############################ 2023-11-29T14:51:06,973 Python recognizes 'bluepyemodel.export_emodel.templates' as an importable package[^1], 2023-11-29T14:51:06,974 but it is absent from setuptools' `packages` configuration. 2023-11-29T14:51:06,975 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-29T14:51:06,976 package, please make sure that 'bluepyemodel.export_emodel.templates' is explicitly added 2023-11-29T14:51:06,977 to the `packages` configuration field. 2023-11-29T14:51:06,978 Alternatively, you can also rely on setuptools' discovery methods 2023-11-29T14:51:06,979 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-29T14:51:06,979 instead of `find_packages(...)`/`find:`). 2023-11-29T14:51:06,981 You can read more about "package discovery" on setuptools documentation page: 2023-11-29T14:51:06,982 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-29T14:51:06,983 If you don't want 'bluepyemodel.export_emodel.templates' to be distributed and are 2023-11-29T14:51:06,983 already explicitly excluding 'bluepyemodel.export_emodel.templates' via 2023-11-29T14:51:06,984 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-29T14:51:06,984 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-29T14:51:06,985 combination with a more fine grained `package-data` configuration. 2023-11-29T14:51:06,986 You can read more about "package data files" on setuptools documentation page: 2023-11-29T14:51:06,987 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-29T14:51:06,989 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-29T14:51:06,989 even if it does not contain any `.py` files. 2023-11-29T14:51:06,990 On the other hand, currently there is no concept of package data 2023-11-29T14:51:06,990 directory, all directories are treated like packages. 2023-11-29T14:51:06,991 ******************************************************************************** 2023-11-29T14:51:06,992 !! 2023-11-29T14:51:06,992 check.warn(importable) 2023-11-29T14:51:06,993 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'tests.test_data' is absent from the `packages` configuration. 2023-11-29T14:51:06,994 !! 2023-11-29T14:51:06,995 ******************************************************************************** 2023-11-29T14:51:06,995 ############################ 2023-11-29T14:51:06,996 # Package would be ignored # 2023-11-29T14:51:06,997 ############################ 2023-11-29T14:51:06,999 Python recognizes 'tests.test_data' as an importable package[^1], 2023-11-29T14:51:07,001 but it is absent from setuptools' `packages` configuration. 2023-11-29T14:51:07,002 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-29T14:51:07,002 package, please make sure that 'tests.test_data' is explicitly added 2023-11-29T14:51:07,003 to the `packages` configuration field. 2023-11-29T14:51:07,006 Alternatively, you can also rely on setuptools' discovery methods 2023-11-29T14:51:07,008 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-29T14:51:07,009 instead of `find_packages(...)`/`find:`). 2023-11-29T14:51:07,010 You can read more about "package discovery" on setuptools documentation page: 2023-11-29T14:51:07,011 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-29T14:51:07,012 If you don't want 'tests.test_data' to be distributed and are 2023-11-29T14:51:07,013 already explicitly excluding 'tests.test_data' via 2023-11-29T14:51:07,013 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-29T14:51:07,014 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-29T14:51:07,015 combination with a more fine grained `package-data` configuration. 2023-11-29T14:51:07,016 You can read more about "package data files" on setuptools documentation page: 2023-11-29T14:51:07,017 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-29T14:51:07,019 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-29T14:51:07,019 even if it does not contain any `.py` files. 2023-11-29T14:51:07,020 On the other hand, currently there is no concept of package data 2023-11-29T14:51:07,020 directory, all directories are treated like packages. 2023-11-29T14:51:07,021 ******************************************************************************** 2023-11-29T14:51:07,022 !! 2023-11-29T14:51:07,023 check.warn(importable) 2023-11-29T14:51:07,023 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'tests.test_data.config' is absent from the `packages` configuration. 2023-11-29T14:51:07,024 !! 2023-11-29T14:51:07,025 ******************************************************************************** 2023-11-29T14:51:07,026 ############################ 2023-11-29T14:51:07,026 # Package would be ignored # 2023-11-29T14:51:07,027 ############################ 2023-11-29T14:51:07,027 Python recognizes 'tests.test_data.config' as an importable package[^1], 2023-11-29T14:51:07,028 but it is absent from setuptools' `packages` configuration. 2023-11-29T14:51:07,029 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-29T14:51:07,030 package, please make sure that 'tests.test_data.config' is explicitly added 2023-11-29T14:51:07,030 to the `packages` configuration field. 2023-11-29T14:51:07,031 Alternatively, you can also rely on setuptools' discovery methods 2023-11-29T14:51:07,032 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-29T14:51:07,033 instead of `find_packages(...)`/`find:`). 2023-11-29T14:51:07,034 You can read more about "package discovery" on setuptools documentation page: 2023-11-29T14:51:07,035 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-29T14:51:07,036 If you don't want 'tests.test_data.config' to be distributed and are 2023-11-29T14:51:07,037 already explicitly excluding 'tests.test_data.config' via 2023-11-29T14:51:07,037 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-29T14:51:07,038 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-29T14:51:07,038 combination with a more fine grained `package-data` configuration. 2023-11-29T14:51:07,040 You can read more about "package data files" on setuptools documentation page: 2023-11-29T14:51:07,041 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-29T14:51:07,042 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-29T14:51:07,043 even if it does not contain any `.py` files. 2023-11-29T14:51:07,043 On the other hand, currently there is no concept of package data 2023-11-29T14:51:07,044 directory, all directories are treated like packages. 2023-11-29T14:51:07,044 ******************************************************************************** 2023-11-29T14:51:07,045 !! 2023-11-29T14:51:07,046 check.warn(importable) 2023-11-29T14:51:07,046 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'tests.test_data.ephys_data' is absent from the `packages` configuration. 2023-11-29T14:51:07,047 !! 2023-11-29T14:51:07,048 ******************************************************************************** 2023-11-29T14:51:07,048 ############################ 2023-11-29T14:51:07,049 # Package would be ignored # 2023-11-29T14:51:07,049 ############################ 2023-11-29T14:51:07,050 Python recognizes 'tests.test_data.ephys_data' as an importable package[^1], 2023-11-29T14:51:07,050 but it is absent from setuptools' `packages` configuration. 2023-11-29T14:51:07,052 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-29T14:51:07,052 package, please make sure that 'tests.test_data.ephys_data' is explicitly added 2023-11-29T14:51:07,053 to the `packages` configuration field. 2023-11-29T14:51:07,054 Alternatively, you can also rely on setuptools' discovery methods 2023-11-29T14:51:07,054 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-29T14:51:07,055 instead of `find_packages(...)`/`find:`). 2023-11-29T14:51:07,056 You can read more about "package discovery" on setuptools documentation page: 2023-11-29T14:51:07,057 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-29T14:51:07,058 If you don't want 'tests.test_data.ephys_data' to be distributed and are 2023-11-29T14:51:07,059 already explicitly excluding 'tests.test_data.ephys_data' via 2023-11-29T14:51:07,059 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-29T14:51:07,060 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-29T14:51:07,060 combination with a more fine grained `package-data` configuration. 2023-11-29T14:51:07,062 You can read more about "package data files" on setuptools documentation page: 2023-11-29T14:51:07,063 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-29T14:51:07,065 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-29T14:51:07,065 even if it does not contain any `.py` files. 2023-11-29T14:51:07,066 On the other hand, currently there is no concept of package data 2023-11-29T14:51:07,066 directory, all directories are treated like packages. 2023-11-29T14:51:07,067 ******************************************************************************** 2023-11-29T14:51:07,068 !! 2023-11-29T14:51:07,069 check.warn(importable) 2023-11-29T14:51:07,069 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'tests.test_data.mechanisms' is absent from the `packages` configuration. 2023-11-29T14:51:07,070 !! 2023-11-29T14:51:07,071 ******************************************************************************** 2023-11-29T14:51:07,072 ############################ 2023-11-29T14:51:07,072 # Package would be ignored # 2023-11-29T14:51:07,073 ############################ 2023-11-29T14:51:07,073 Python recognizes 'tests.test_data.mechanisms' as an importable package[^1], 2023-11-29T14:51:07,074 but it is absent from setuptools' `packages` configuration. 2023-11-29T14:51:07,075 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-29T14:51:07,076 package, please make sure that 'tests.test_data.mechanisms' is explicitly added 2023-11-29T14:51:07,076 to the `packages` configuration field. 2023-11-29T14:51:07,078 Alternatively, you can also rely on setuptools' discovery methods 2023-11-29T14:51:07,078 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-29T14:51:07,079 instead of `find_packages(...)`/`find:`). 2023-11-29T14:51:07,080 You can read more about "package discovery" on setuptools documentation page: 2023-11-29T14:51:07,081 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-29T14:51:07,082 If you don't want 'tests.test_data.mechanisms' to be distributed and are 2023-11-29T14:51:07,083 already explicitly excluding 'tests.test_data.mechanisms' via 2023-11-29T14:51:07,084 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-29T14:51:07,084 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-29T14:51:07,085 combination with a more fine grained `package-data` configuration. 2023-11-29T14:51:07,086 You can read more about "package data files" on setuptools documentation page: 2023-11-29T14:51:07,088 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-29T14:51:07,091 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-29T14:51:07,091 even if it does not contain any `.py` files. 2023-11-29T14:51:07,092 On the other hand, currently there is no concept of package data 2023-11-29T14:51:07,093 directory, all directories are treated like packages. 2023-11-29T14:51:07,094 ******************************************************************************** 2023-11-29T14:51:07,107 !! 2023-11-29T14:51:07,113 check.warn(importable) 2023-11-29T14:51:07,116 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'tests.test_data.morphology' is absent from the `packages` configuration. 2023-11-29T14:51:07,125 !! 2023-11-29T14:51:07,135 ******************************************************************************** 2023-11-29T14:51:07,145 ############################ 2023-11-29T14:51:07,159 # Package would be ignored # 2023-11-29T14:51:07,160 ############################ 2023-11-29T14:51:07,160 Python recognizes 'tests.test_data.morphology' as an importable package[^1], 2023-11-29T14:51:07,161 but it is absent from setuptools' `packages` configuration. 2023-11-29T14:51:07,162 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-29T14:51:07,163 package, please make sure that 'tests.test_data.morphology' is explicitly added 2023-11-29T14:51:07,163 to the `packages` configuration field. 2023-11-29T14:51:07,164 Alternatively, you can also rely on setuptools' discovery methods 2023-11-29T14:51:07,165 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-29T14:51:07,165 instead of `find_packages(...)`/`find:`). 2023-11-29T14:51:07,166 You can read more about "package discovery" on setuptools documentation page: 2023-11-29T14:51:07,168 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-29T14:51:07,169 If you don't want 'tests.test_data.morphology' to be distributed and are 2023-11-29T14:51:07,169 already explicitly excluding 'tests.test_data.morphology' via 2023-11-29T14:51:07,170 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-29T14:51:07,170 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-29T14:51:07,171 combination with a more fine grained `package-data` configuration. 2023-11-29T14:51:07,172 You can read more about "package data files" on setuptools documentation page: 2023-11-29T14:51:07,173 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-29T14:51:07,174 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-29T14:51:07,174 even if it does not contain any `.py` files. 2023-11-29T14:51:07,175 On the other hand, currently there is no concept of package data 2023-11-29T14:51:07,175 directory, all directories are treated like packages. 2023-11-29T14:51:07,176 ******************************************************************************** 2023-11-29T14:51:07,177 !! 2023-11-29T14:51:07,177 check.warn(importable) 2023-11-29T14:51:07,178 creating build/lib/tests/test_data 2023-11-29T14:51:07,178 copying tests/test_data/final.json -> build/lib/tests/test_data 2023-11-29T14:51:07,179 copying tests/test_data/final_tmp.json -> build/lib/tests/test_data 2023-11-29T14:51:07,179 copying tests/test_data/test_APWaveform_320.soma.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,180 copying tests/test_data/test_IV_-100.soma.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,180 copying tests/test_data/test_RMPProtocol.soma.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,181 copying tests/test_data/test_RinProtocol.soma.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,181 copying tests/test_data/test_SpikeRec_600.soma.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,182 copying tests/test_data/test_Step_200.soma.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,182 copying tests/test_data/test_Step_280.soma.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,183 copying tests/test_data/test_bAP.ca_ais.cai.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,183 copying tests/test_data/test_bAP.ca_prox_apic.cai.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,184 copying tests/test_data/test_bAP.ca_prox_basal.cai.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,184 copying tests/test_data/test_bAP.ca_soma.cai.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,185 copying tests/test_data/test_bAP.dend1.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,185 copying tests/test_data/test_bAP.dend2.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,186 copying tests/test_data/test_bAP.soma.v.csv -> build/lib/tests/test_data 2023-11-29T14:51:07,186 copying tests/test_data/test_features.json -> build/lib/tests/test_data 2023-11-29T14:51:07,187 copying tests/test_data/test_mechanisms.json -> build/lib/tests/test_data 2023-11-29T14:51:07,188 copying tests/test_data/test_parameters.json -> build/lib/tests/test_data 2023-11-29T14:51:07,188 copying tests/test_data/test_protocols.json -> build/lib/tests/test_data 2023-11-29T14:51:07,189 copying tests/test_data/test_recipes.json -> build/lib/tests/test_data 2023-11-29T14:51:07,190 creating build/lib/tests/test_data/config 2023-11-29T14:51:07,191 copying tests/test_data/config/config_dict.json -> build/lib/tests/test_data/config 2023-11-29T14:51:07,191 copying tests/test_data/config/features.json -> build/lib/tests/test_data/config 2023-11-29T14:51:07,192 copying tests/test_data/config/params.json -> build/lib/tests/test_data/config 2023-11-29T14:51:07,193 copying tests/test_data/config/params_restart.json -> build/lib/tests/test_data/config 2023-11-29T14:51:07,193 copying tests/test_data/config/protocols.json -> build/lib/tests/test_data/config 2023-11-29T14:51:07,195 copying tests/test_data/config/recipes.json -> build/lib/tests/test_data/config 2023-11-29T14:51:07,199 copying tests/test_data/config/recipes_restart.json -> build/lib/tests/test_data/config 2023-11-29T14:51:07,204 creating build/lib/tests/test_data/ephys_data 2023-11-29T14:51:07,205 copying tests/test_data/ephys_data/C010600C1-MT-C1.nwb -> build/lib/tests/test_data/ephys_data 2023-11-29T14:51:07,206 creating build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,206 copying tests/test_data/mechanisms/CaDynamics_DC0.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,207 copying tests/test_data/mechanisms/Ca_HVA2.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,207 copying tests/test_data/mechanisms/Ca_LVAst.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,208 copying tests/test_data/mechanisms/Ih.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,208 copying tests/test_data/mechanisms/K_Pst.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,209 copying tests/test_data/mechanisms/K_Tst.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,209 copying tests/test_data/mechanisms/NaTg.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,210 copying tests/test_data/mechanisms/Nap_Et2.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,210 copying tests/test_data/mechanisms/SK_E2.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,211 copying tests/test_data/mechanisms/SKv3_1.mod -> build/lib/tests/test_data/mechanisms 2023-11-29T14:51:07,211 creating build/lib/tests/test_data/morphology 2023-11-29T14:51:07,212 copying tests/test_data/morphology/C060114A5.asc -> build/lib/tests/test_data/morphology 2023-11-29T14:51:07,213 creating build/lib/bluepyemodel/export_emodel/templates 2023-11-29T14:51:07,213 copying bluepyemodel/export_emodel/templates/cell_template.jinja2 -> build/lib/bluepyemodel/export_emodel/templates 2023-11-29T14:51:07,214 copying bluepyemodel/export_emodel/templates/cell_template_neurodamus.jinja2 -> build/lib/bluepyemodel/export_emodel/templates 2023-11-29T14:51:07,214 copying bluepyemodel/export_emodel/templates/cell_template_neurodamus_sbo.jinja2 -> build/lib/bluepyemodel/export_emodel/templates 2023-11-29T14:51:07,217 creating build/lib/bluepyemodel/ecode/data 2023-11-29T14:51:07,218 copying bluepyemodel/ecode/data/NoiseOU3.txt -> build/lib/bluepyemodel/ecode/data 2023-11-29T14:51:07,650 copying bluepyemodel/ecode/data/SubWhiteNoise.txt -> build/lib/bluepyemodel/ecode/data 2023-11-29T14:51:07,712 copying bluepyemodel/ecode/data/WhiteNoise.txt -> build/lib/bluepyemodel/ecode/data 2023-11-29T14:51:08,213 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-11-29T14:51:08,214 !! 2023-11-29T14:51:08,215 ******************************************************************************** 2023-11-29T14:51:08,216 Please avoid running ``setup.py`` directly. 2023-11-29T14:51:08,216 Instead, use pypa/build, pypa/installer or other 2023-11-29T14:51:08,217 standards-based tools. 2023-11-29T14:51:08,218 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-11-29T14:51:08,219 ******************************************************************************** 2023-11-29T14:51:08,220 !! 2023-11-29T14:51:08,221 self.initialize_options() 2023-11-29T14:51:08,242 installing to build/bdist.linux-aarch64/wheel 2023-11-29T14:51:08,243 running install 2023-11-29T14:51:08,266 running install_lib 2023-11-29T14:51:08,295 creating build/bdist.linux-aarch64 2023-11-29T14:51:08,295 creating build/bdist.linux-aarch64/wheel 2023-11-29T14:51:08,297 creating build/bdist.linux-aarch64/wheel/tests 2023-11-29T14:51:08,298 copying build/lib/tests/__init__.py -> build/bdist.linux-aarch64/wheel/tests 2023-11-29T14:51:08,301 creating build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,302 copying build/lib/tests/unit_tests/test_local_access_point.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,305 copying build/lib/tests/unit_tests/test_evaluator.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,307 copying build/lib/tests/unit_tests/test_optimisation.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,309 copying build/lib/tests/unit_tests/test_model_parameters_configuration.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,312 copying build/lib/tests/unit_tests/__init__.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,314 copying build/lib/tests/unit_tests/test_validation_functions.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,316 copying build/lib/tests/unit_tests/test_model.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,317 copying build/lib/tests/unit_tests/test_tools.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,320 copying build/lib/tests/unit_tests/test_emodelmetadata.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,322 copying build/lib/tests/unit_tests/test_targets_configuration.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,324 copying build/lib/tests/unit_tests/test_fitness_calculator_configuration.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,326 copying build/lib/tests/unit_tests/test_plotting.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,328 copying build/lib/tests/unit_tests/test_ecodes.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,331 copying build/lib/tests/unit_tests/test_emodel_pipeline.py -> build/bdist.linux-aarch64/wheel/tests/unit_tests 2023-11-29T14:51:08,334 creating build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,335 copying build/lib/tests/test_data/test_RinProtocol.soma.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,337 copying build/lib/tests/test_data/test_bAP.soma.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,340 copying build/lib/tests/test_data/test_recipes.json -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,342 copying build/lib/tests/test_data/test_bAP.dend2.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,345 creating build/bdist.linux-aarch64/wheel/tests/test_data/morphology 2023-11-29T14:51:08,346 copying build/lib/tests/test_data/morphology/C060114A5.asc -> build/bdist.linux-aarch64/wheel/tests/test_data/morphology 2023-11-29T14:51:08,360 copying build/lib/tests/test_data/test_IV_-100.soma.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,362 copying build/lib/tests/test_data/test_Step_200.soma.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,368 copying build/lib/tests/test_data/test_Step_280.soma.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,375 copying build/lib/tests/test_data/final_tmp.json -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,378 creating build/bdist.linux-aarch64/wheel/tests/test_data/ephys_data 2023-11-29T14:51:08,379 copying build/lib/tests/test_data/ephys_data/C010600C1-MT-C1.nwb -> build/bdist.linux-aarch64/wheel/tests/test_data/ephys_data 2023-11-29T14:51:08,460 copying build/lib/tests/test_data/test_bAP.ca_ais.cai.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,463 copying build/lib/tests/test_data/final.json -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,466 copying build/lib/tests/test_data/test_bAP.dend1.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,469 copying build/lib/tests/test_data/test_bAP.ca_prox_apic.cai.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,472 copying build/lib/tests/test_data/test_parameters.json -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,474 copying build/lib/tests/test_data/test_mechanisms.json -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,476 creating build/bdist.linux-aarch64/wheel/tests/test_data/config 2023-11-29T14:51:08,477 copying build/lib/tests/test_data/config/params.json -> build/bdist.linux-aarch64/wheel/tests/test_data/config 2023-11-29T14:51:08,479 copying build/lib/tests/test_data/config/recipes.json -> build/bdist.linux-aarch64/wheel/tests/test_data/config 2023-11-29T14:51:08,481 copying build/lib/tests/test_data/config/params_restart.json -> build/bdist.linux-aarch64/wheel/tests/test_data/config 2023-11-29T14:51:08,484 copying build/lib/tests/test_data/config/config_dict.json -> build/bdist.linux-aarch64/wheel/tests/test_data/config 2023-11-29T14:51:08,486 copying build/lib/tests/test_data/config/protocols.json -> build/bdist.linux-aarch64/wheel/tests/test_data/config 2023-11-29T14:51:08,488 copying build/lib/tests/test_data/config/recipes_restart.json -> build/bdist.linux-aarch64/wheel/tests/test_data/config 2023-11-29T14:51:08,489 copying build/lib/tests/test_data/config/features.json -> build/bdist.linux-aarch64/wheel/tests/test_data/config 2023-11-29T14:51:08,492 copying build/lib/tests/test_data/test_features.json -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,495 creating build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,496 copying build/lib/tests/test_data/mechanisms/CaDynamics_DC0.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,498 copying build/lib/tests/test_data/mechanisms/SK_E2.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,500 copying build/lib/tests/test_data/mechanisms/NaTg.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,503 copying build/lib/tests/test_data/mechanisms/K_Pst.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,505 copying build/lib/tests/test_data/mechanisms/Nap_Et2.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,507 copying build/lib/tests/test_data/mechanisms/SKv3_1.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,509 copying build/lib/tests/test_data/mechanisms/Ca_LVAst.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,511 copying build/lib/tests/test_data/mechanisms/Ih.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,513 copying build/lib/tests/test_data/mechanisms/K_Tst.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,515 copying build/lib/tests/test_data/mechanisms/Ca_HVA2.mod -> build/bdist.linux-aarch64/wheel/tests/test_data/mechanisms 2023-11-29T14:51:08,517 copying build/lib/tests/test_data/test_APWaveform_320.soma.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,520 copying build/lib/tests/test_data/test_bAP.ca_prox_basal.cai.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,522 copying build/lib/tests/test_data/test_protocols.json -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,525 copying build/lib/tests/test_data/test_RMPProtocol.soma.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,527 copying build/lib/tests/test_data/test_SpikeRec_600.soma.v.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,529 copying build/lib/tests/test_data/test_bAP.ca_soma.cai.csv -> build/bdist.linux-aarch64/wheel/tests/test_data 2023-11-29T14:51:08,533 creating build/bdist.linux-aarch64/wheel/tests/test_models 2023-11-29T14:51:08,534 copying build/lib/tests/test_models/dummycells.py -> build/bdist.linux-aarch64/wheel/tests/test_models 2023-11-29T14:51:08,536 copying build/lib/tests/test_models/__init__.py -> build/bdist.linux-aarch64/wheel/tests/test_models 2023-11-29T14:51:08,539 creating build/bdist.linux-aarch64/wheel/tests/functional_tests 2023-11-29T14:51:08,540 copying build/lib/tests/functional_tests/__init__.py -> build/bdist.linux-aarch64/wheel/tests/functional_tests 2023-11-29T14:51:08,541 copying build/lib/tests/functional_tests/test_validation.py -> build/bdist.linux-aarch64/wheel/tests/functional_tests 2023-11-29T14:51:08,544 copying build/lib/tests/functional_tests/test_protocols.py -> build/bdist.linux-aarch64/wheel/tests/functional_tests 2023-11-29T14:51:08,546 creating build/bdist.linux-aarch64/wheel/bluepyemodel 2023-11-29T14:51:08,547 copying build/lib/bluepyemodel/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel 2023-11-29T14:51:08,550 creating build/bdist.linux-aarch64/wheel/bluepyemodel/emodel_pipeline 2023-11-29T14:51:08,551 copying build/lib/bluepyemodel/emodel_pipeline/plotting.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/emodel_pipeline 2023-11-29T14:51:08,554 copying build/lib/bluepyemodel/emodel_pipeline/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/emodel_pipeline 2023-11-29T14:51:08,556 copying build/lib/bluepyemodel/emodel_pipeline/emodel_settings.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/emodel_pipeline 2023-11-29T14:51:08,558 copying build/lib/bluepyemodel/emodel_pipeline/emodel_workflow.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/emodel_pipeline 2023-11-29T14:51:08,561 copying build/lib/bluepyemodel/emodel_pipeline/emodel_script.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/emodel_pipeline 2023-11-29T14:51:08,562 copying build/lib/bluepyemodel/emodel_pipeline/emodel_pipeline.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/emodel_pipeline 2023-11-29T14:51:08,565 copying build/lib/bluepyemodel/emodel_pipeline/emodel.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/emodel_pipeline 2023-11-29T14:51:08,567 copying build/lib/bluepyemodel/emodel_pipeline/emodel_metadata.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/emodel_pipeline 2023-11-29T14:51:08,570 creating build/bdist.linux-aarch64/wheel/bluepyemodel/export_emodel 2023-11-29T14:51:08,572 creating build/bdist.linux-aarch64/wheel/bluepyemodel/export_emodel/templates 2023-11-29T14:51:08,573 copying build/lib/bluepyemodel/export_emodel/templates/cell_template_neurodamus.jinja2 -> build/bdist.linux-aarch64/wheel/bluepyemodel/export_emodel/templates 2023-11-29T14:51:08,575 copying build/lib/bluepyemodel/export_emodel/templates/cell_template_neurodamus_sbo.jinja2 -> build/bdist.linux-aarch64/wheel/bluepyemodel/export_emodel/templates 2023-11-29T14:51:08,578 copying build/lib/bluepyemodel/export_emodel/templates/cell_template.jinja2 -> build/bdist.linux-aarch64/wheel/bluepyemodel/export_emodel/templates 2023-11-29T14:51:08,580 copying build/lib/bluepyemodel/export_emodel/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/export_emodel 2023-11-29T14:51:08,582 copying build/lib/bluepyemodel/export_emodel/utils.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/export_emodel 2023-11-29T14:51:08,584 copying build/lib/bluepyemodel/export_emodel/export_emodel.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/export_emodel 2023-11-29T14:51:08,587 creating build/bdist.linux-aarch64/wheel/bluepyemodel/optimisation 2023-11-29T14:51:08,588 copying build/lib/bluepyemodel/optimisation/optimisation.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/optimisation 2023-11-29T14:51:08,590 copying build/lib/bluepyemodel/optimisation/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/optimisation 2023-11-29T14:51:08,593 creating build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,594 copying build/lib/bluepyemodel/model/neuron_model_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,597 copying build/lib/bluepyemodel/model/distribution_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,599 copying build/lib/bluepyemodel/model/parameter_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,601 copying build/lib/bluepyemodel/model/model_configurator.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,604 copying build/lib/bluepyemodel/model/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,606 copying build/lib/bluepyemodel/model/morphology_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,608 copying build/lib/bluepyemodel/model/utils.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,609 copying build/lib/bluepyemodel/model/model_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,611 copying build/lib/bluepyemodel/model/mechanism_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,613 copying build/lib/bluepyemodel/model/model.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/model 2023-11-29T14:51:08,616 creating build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,617 copying build/lib/bluepyemodel/evaluation/recordings.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,620 copying build/lib/bluepyemodel/evaluation/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,622 copying build/lib/bluepyemodel/evaluation/evaluation.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,625 copying build/lib/bluepyemodel/evaluation/modifiers.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,627 copying build/lib/bluepyemodel/evaluation/efel_feature_bpem.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,630 copying build/lib/bluepyemodel/evaluation/efeature_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,632 copying build/lib/bluepyemodel/evaluation/protocols.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,635 copying build/lib/bluepyemodel/evaluation/fitness_calculator_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,638 copying build/lib/bluepyemodel/evaluation/evaluator.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,641 copying build/lib/bluepyemodel/evaluation/protocol_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/evaluation 2023-11-29T14:51:08,645 creating build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:08,646 copying build/lib/bluepyemodel/ecode/poscheops.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:08,648 copying build/lib/bluepyemodel/ecode/noiseou3.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:08,650 copying build/lib/bluepyemodel/ecode/firepattern.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:08,653 copying build/lib/bluepyemodel/ecode/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:08,655 copying build/lib/bluepyemodel/ecode/apwaveform.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:08,657 copying build/lib/bluepyemodel/ecode/iv.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:08,659 copying build/lib/bluepyemodel/ecode/random_square_inputs.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:08,662 copying build/lib/bluepyemodel/ecode/stimulus.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:08,664 creating build/bdist.linux-aarch64/wheel/bluepyemodel/ecode/data 2023-11-29T14:51:08,665 copying build/lib/bluepyemodel/ecode/data/NoiseOU3.txt -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode/data 2023-11-29T14:51:09,127 copying build/lib/bluepyemodel/ecode/data/WhiteNoise.txt -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode/data 2023-11-29T14:51:09,594 copying build/lib/bluepyemodel/ecode/data/SubWhiteNoise.txt -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode/data 2023-11-29T14:51:09,640 copying build/lib/bluepyemodel/ecode/sahp.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,642 copying build/lib/bluepyemodel/ecode/dendrite.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,645 copying build/lib/bluepyemodel/ecode/ramp.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,647 copying build/lib/bluepyemodel/ecode/noise.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,649 copying build/lib/bluepyemodel/ecode/probampanmda_ems.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,651 copying build/lib/bluepyemodel/ecode/whitenoise.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,653 copying build/lib/bluepyemodel/ecode/spikerec.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,655 copying build/lib/bluepyemodel/ecode/hyperdepol.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,658 copying build/lib/bluepyemodel/ecode/dehyperpol.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,660 copying build/lib/bluepyemodel/ecode/comb.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,662 copying build/lib/bluepyemodel/ecode/customfromfile.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,664 copying build/lib/bluepyemodel/ecode/idrest.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,667 copying build/lib/bluepyemodel/ecode/subwhitenoise.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,669 copying build/lib/bluepyemodel/ecode/negcheops.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,671 copying build/lib/bluepyemodel/ecode/sinespec.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/ecode 2023-11-29T14:51:09,674 creating build/bdist.linux-aarch64/wheel/bluepyemodel/efeatures_extraction 2023-11-29T14:51:09,675 copying build/lib/bluepyemodel/efeatures_extraction/targets_configurator.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/efeatures_extraction 2023-11-29T14:51:09,677 copying build/lib/bluepyemodel/efeatures_extraction/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/efeatures_extraction 2023-11-29T14:51:09,680 copying build/lib/bluepyemodel/efeatures_extraction/trace_file.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/efeatures_extraction 2023-11-29T14:51:09,682 copying build/lib/bluepyemodel/efeatures_extraction/auto_targets.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/efeatures_extraction 2023-11-29T14:51:09,684 copying build/lib/bluepyemodel/efeatures_extraction/targets_configuration.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/efeatures_extraction 2023-11-29T14:51:09,686 copying build/lib/bluepyemodel/efeatures_extraction/efeatures_extraction.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/efeatures_extraction 2023-11-29T14:51:09,689 copying build/lib/bluepyemodel/efeatures_extraction/target.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/efeatures_extraction 2023-11-29T14:51:09,691 creating build/bdist.linux-aarch64/wheel/bluepyemodel/access_point 2023-11-29T14:51:09,692 copying build/lib/bluepyemodel/access_point/local.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/access_point 2023-11-29T14:51:09,696 copying build/lib/bluepyemodel/access_point/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/access_point 2023-11-29T14:51:09,698 copying build/lib/bluepyemodel/access_point/access_point.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/access_point 2023-11-29T14:51:09,701 creating build/bdist.linux-aarch64/wheel/bluepyemodel/tools 2023-11-29T14:51:09,702 copying build/lib/bluepyemodel/tools/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tools 2023-11-29T14:51:09,705 copying build/lib/bluepyemodel/tools/mechanisms.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tools 2023-11-29T14:51:09,707 copying build/lib/bluepyemodel/tools/utils.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tools 2023-11-29T14:51:09,709 copying build/lib/bluepyemodel/tools/search_pdfs.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tools 2023-11-29T14:51:09,712 copying build/lib/bluepyemodel/tools/multiprocessing.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tools 2023-11-29T14:51:09,714 copying build/lib/bluepyemodel/tools/morphology.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tools 2023-11-29T14:51:09,716 creating build/bdist.linux-aarch64/wheel/bluepyemodel/tasks 2023-11-29T14:51:09,718 creating build/bdist.linux-aarch64/wheel/bluepyemodel/tasks/emodel_creation 2023-11-29T14:51:09,719 copying build/lib/bluepyemodel/tasks/emodel_creation/optimisation.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tasks/emodel_creation 2023-11-29T14:51:09,723 copying build/lib/bluepyemodel/tasks/emodel_creation/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tasks/emodel_creation 2023-11-29T14:51:09,724 copying build/lib/bluepyemodel/tasks/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tasks 2023-11-29T14:51:09,726 copying build/lib/bluepyemodel/tasks/config.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tasks 2023-11-29T14:51:09,728 copying build/lib/bluepyemodel/tasks/luigi_tools.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tasks 2023-11-29T14:51:09,731 copying build/lib/bluepyemodel/tasks/luigi_custom.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/tasks 2023-11-29T14:51:09,733 creating build/bdist.linux-aarch64/wheel/bluepyemodel/validation 2023-11-29T14:51:09,734 copying build/lib/bluepyemodel/validation/validation_functions.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/validation 2023-11-29T14:51:09,736 copying build/lib/bluepyemodel/validation/__init__.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/validation 2023-11-29T14:51:09,738 copying build/lib/bluepyemodel/validation/validation.py -> build/bdist.linux-aarch64/wheel/bluepyemodel/validation 2023-11-29T14:51:09,740 running install_egg_info 2023-11-29T14:51:09,770 Copying bluepyemodel.egg-info to build/bdist.linux-aarch64/wheel/bluepyemodel-0.0.64-py3.11.egg-info 2023-11-29T14:51:09,782 running install_scripts 2023-11-29T14:51:09,809 creating build/bdist.linux-aarch64/wheel/bluepyemodel-0.0.64.dist-info/WHEEL 2023-11-29T14:51:09,812 creating '/tmp/pip-wheel-5tm5d2db/bluepyemodel-0.0.64-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it 2023-11-29T14:51:09,814 adding 'bluepyemodel/__init__.py' 2023-11-29T14:51:09,817 adding 'bluepyemodel/access_point/__init__.py' 2023-11-29T14:51:09,819 adding 'bluepyemodel/access_point/access_point.py' 2023-11-29T14:51:09,823 adding 'bluepyemodel/access_point/local.py' 2023-11-29T14:51:09,825 adding 'bluepyemodel/ecode/__init__.py' 2023-11-29T14:51:09,827 adding 'bluepyemodel/ecode/apwaveform.py' 2023-11-29T14:51:09,828 adding 'bluepyemodel/ecode/comb.py' 2023-11-29T14:51:09,830 adding 'bluepyemodel/ecode/customfromfile.py' 2023-11-29T14:51:09,832 adding 'bluepyemodel/ecode/dehyperpol.py' 2023-11-29T14:51:09,833 adding 'bluepyemodel/ecode/dendrite.py' 2023-11-29T14:51:09,834 adding 'bluepyemodel/ecode/firepattern.py' 2023-11-29T14:51:09,836 adding 'bluepyemodel/ecode/hyperdepol.py' 2023-11-29T14:51:09,838 adding 'bluepyemodel/ecode/idrest.py' 2023-11-29T14:51:09,839 adding 'bluepyemodel/ecode/iv.py' 2023-11-29T14:51:09,841 adding 'bluepyemodel/ecode/negcheops.py' 2023-11-29T14:51:09,842 adding 'bluepyemodel/ecode/noise.py' 2023-11-29T14:51:09,844 adding 'bluepyemodel/ecode/noiseou3.py' 2023-11-29T14:51:09,846 adding 'bluepyemodel/ecode/poscheops.py' 2023-11-29T14:51:09,847 adding 'bluepyemodel/ecode/probampanmda_ems.py' 2023-11-29T14:51:09,849 adding 'bluepyemodel/ecode/ramp.py' 2023-11-29T14:51:09,851 adding 'bluepyemodel/ecode/random_square_inputs.py' 2023-11-29T14:51:09,852 adding 'bluepyemodel/ecode/sahp.py' 2023-11-29T14:51:09,854 adding 'bluepyemodel/ecode/sinespec.py' 2023-11-29T14:51:09,855 adding 'bluepyemodel/ecode/spikerec.py' 2023-11-29T14:51:09,857 adding 'bluepyemodel/ecode/stimulus.py' 2023-11-29T14:51:09,858 adding 'bluepyemodel/ecode/subwhitenoise.py' 2023-11-29T14:51:09,859 adding 'bluepyemodel/ecode/whitenoise.py' 2023-11-29T14:51:12,203 adding 'bluepyemodel/ecode/data/NoiseOU3.txt' 2023-11-29T14:51:12,592 adding 'bluepyemodel/ecode/data/SubWhiteNoise.txt' 2023-11-29T14:51:14,941 adding 'bluepyemodel/ecode/data/WhiteNoise.txt' 2023-11-29T14:51:15,131 adding 'bluepyemodel/efeatures_extraction/__init__.py' 2023-11-29T14:51:15,132 adding 'bluepyemodel/efeatures_extraction/auto_targets.py' 2023-11-29T14:51:15,134 adding 'bluepyemodel/efeatures_extraction/efeatures_extraction.py' 2023-11-29T14:51:15,136 adding 'bluepyemodel/efeatures_extraction/target.py' 2023-11-29T14:51:15,138 adding 'bluepyemodel/efeatures_extraction/targets_configuration.py' 2023-11-29T14:51:15,139 adding 'bluepyemodel/efeatures_extraction/targets_configurator.py' 2023-11-29T14:51:15,141 adding 'bluepyemodel/efeatures_extraction/trace_file.py' 2023-11-29T14:51:15,143 adding 'bluepyemodel/emodel_pipeline/__init__.py' 2023-11-29T14:51:15,144 adding 'bluepyemodel/emodel_pipeline/emodel.py' 2023-11-29T14:51:15,146 adding 'bluepyemodel/emodel_pipeline/emodel_metadata.py' 2023-11-29T14:51:15,148 adding 'bluepyemodel/emodel_pipeline/emodel_pipeline.py' 2023-11-29T14:51:15,149 adding 'bluepyemodel/emodel_pipeline/emodel_script.py' 2023-11-29T14:51:15,152 adding 'bluepyemodel/emodel_pipeline/emodel_settings.py' 2023-11-29T14:51:15,154 adding 'bluepyemodel/emodel_pipeline/emodel_workflow.py' 2023-11-29T14:51:15,158 adding 'bluepyemodel/emodel_pipeline/plotting.py' 2023-11-29T14:51:15,161 adding 'bluepyemodel/evaluation/__init__.py' 2023-11-29T14:51:15,162 adding 'bluepyemodel/evaluation/efeature_configuration.py' 2023-11-29T14:51:15,164 adding 'bluepyemodel/evaluation/efel_feature_bpem.py' 2023-11-29T14:51:15,167 adding 'bluepyemodel/evaluation/evaluation.py' 2023-11-29T14:51:15,170 adding 'bluepyemodel/evaluation/evaluator.py' 2023-11-29T14:51:15,173 adding 'bluepyemodel/evaluation/fitness_calculator_configuration.py' 2023-11-29T14:51:15,175 adding 'bluepyemodel/evaluation/modifiers.py' 2023-11-29T14:51:15,177 adding 'bluepyemodel/evaluation/protocol_configuration.py' 2023-11-29T14:51:15,180 adding 'bluepyemodel/evaluation/protocols.py' 2023-11-29T14:51:15,181 adding 'bluepyemodel/evaluation/recordings.py' 2023-11-29T14:51:15,183 adding 'bluepyemodel/export_emodel/__init__.py' 2023-11-29T14:51:15,185 adding 'bluepyemodel/export_emodel/export_emodel.py' 2023-11-29T14:51:15,187 adding 'bluepyemodel/export_emodel/utils.py' 2023-11-29T14:51:15,189 adding 'bluepyemodel/export_emodel/templates/cell_template.jinja2' 2023-11-29T14:51:15,191 adding 'bluepyemodel/export_emodel/templates/cell_template_neurodamus.jinja2' 2023-11-29T14:51:15,193 adding 'bluepyemodel/export_emodel/templates/cell_template_neurodamus_sbo.jinja2' 2023-11-29T14:51:15,195 adding 'bluepyemodel/model/__init__.py' 2023-11-29T14:51:15,196 adding 'bluepyemodel/model/distribution_configuration.py' 2023-11-29T14:51:15,198 adding 'bluepyemodel/model/mechanism_configuration.py' 2023-11-29T14:51:15,200 adding 'bluepyemodel/model/model.py' 2023-11-29T14:51:15,201 adding 'bluepyemodel/model/model_configuration.py' 2023-11-29T14:51:15,203 adding 'bluepyemodel/model/model_configurator.py' 2023-11-29T14:51:15,205 adding 'bluepyemodel/model/morphology_configuration.py' 2023-11-29T14:51:15,208 adding 'bluepyemodel/model/neuron_model_configuration.py' 2023-11-29T14:51:15,209 adding 'bluepyemodel/model/parameter_configuration.py' 2023-11-29T14:51:15,211 adding 'bluepyemodel/model/utils.py' 2023-11-29T14:51:15,212 adding 'bluepyemodel/optimisation/__init__.py' 2023-11-29T14:51:15,214 adding 'bluepyemodel/optimisation/optimisation.py' 2023-11-29T14:51:15,216 adding 'bluepyemodel/tasks/__init__.py' 2023-11-29T14:51:15,218 adding 'bluepyemodel/tasks/config.py' 2023-11-29T14:51:15,219 adding 'bluepyemodel/tasks/luigi_custom.py' 2023-11-29T14:51:15,221 adding 'bluepyemodel/tasks/luigi_tools.py' 2023-11-29T14:51:15,223 adding 'bluepyemodel/tasks/emodel_creation/__init__.py' 2023-11-29T14:51:15,226 adding 'bluepyemodel/tasks/emodel_creation/optimisation.py' 2023-11-29T14:51:15,229 adding 'bluepyemodel/tools/__init__.py' 2023-11-29T14:51:15,230 adding 'bluepyemodel/tools/mechanisms.py' 2023-11-29T14:51:15,232 adding 'bluepyemodel/tools/morphology.py' 2023-11-29T14:51:15,234 adding 'bluepyemodel/tools/multiprocessing.py' 2023-11-29T14:51:15,235 adding 'bluepyemodel/tools/search_pdfs.py' 2023-11-29T14:51:15,237 adding 'bluepyemodel/tools/utils.py' 2023-11-29T14:51:15,239 adding 'bluepyemodel/validation/__init__.py' 2023-11-29T14:51:15,241 adding 'bluepyemodel/validation/validation.py' 2023-11-29T14:51:15,242 adding 'bluepyemodel/validation/validation_functions.py' 2023-11-29T14:51:15,245 adding 'tests/__init__.py' 2023-11-29T14:51:15,247 adding 'tests/functional_tests/__init__.py' 2023-11-29T14:51:15,248 adding 'tests/functional_tests/test_protocols.py' 2023-11-29T14:51:15,249 adding 'tests/functional_tests/test_validation.py' 2023-11-29T14:51:15,253 adding 'tests/test_data/final.json' 2023-11-29T14:51:15,255 adding 'tests/test_data/final_tmp.json' 2023-11-29T14:51:15,260 adding 'tests/test_data/test_APWaveform_320.soma.v.csv' 2023-11-29T14:51:15,263 adding 'tests/test_data/test_IV_-100.soma.v.csv' 2023-11-29T14:51:15,265 adding 'tests/test_data/test_RMPProtocol.soma.v.csv' 2023-11-29T14:51:15,266 adding 'tests/test_data/test_RinProtocol.soma.v.csv' 2023-11-29T14:51:15,269 adding 'tests/test_data/test_SpikeRec_600.soma.v.csv' 2023-11-29T14:51:15,334 adding 'tests/test_data/test_Step_200.soma.v.csv' 2023-11-29T14:51:15,406 adding 'tests/test_data/test_Step_280.soma.v.csv' 2023-11-29T14:51:15,412 adding 'tests/test_data/test_bAP.ca_ais.cai.csv' 2023-11-29T14:51:15,415 adding 'tests/test_data/test_bAP.ca_prox_apic.cai.csv' 2023-11-29T14:51:15,419 adding 'tests/test_data/test_bAP.ca_prox_basal.cai.csv' 2023-11-29T14:51:15,422 adding 'tests/test_data/test_bAP.ca_soma.cai.csv' 2023-11-29T14:51:15,426 adding 'tests/test_data/test_bAP.dend1.v.csv' 2023-11-29T14:51:15,430 adding 'tests/test_data/test_bAP.dend2.v.csv' 2023-11-29T14:51:15,434 adding 'tests/test_data/test_bAP.soma.v.csv' 2023-11-29T14:51:15,436 adding 'tests/test_data/test_features.json' 2023-11-29T14:51:15,437 adding 'tests/test_data/test_mechanisms.json' 2023-11-29T14:51:15,439 adding 'tests/test_data/test_parameters.json' 2023-11-29T14:51:15,440 adding 'tests/test_data/test_protocols.json' 2023-11-29T14:51:15,441 adding 'tests/test_data/test_recipes.json' 2023-11-29T14:51:15,443 adding 'tests/test_data/config/config_dict.json' 2023-11-29T14:51:15,445 adding 'tests/test_data/config/features.json' 2023-11-29T14:51:15,447 adding 'tests/test_data/config/params.json' 2023-11-29T14:51:15,449 adding 'tests/test_data/config/params_restart.json' 2023-11-29T14:51:15,450 adding 'tests/test_data/config/protocols.json' 2023-11-29T14:51:15,451 adding 'tests/test_data/config/recipes.json' 2023-11-29T14:51:15,452 adding 'tests/test_data/config/recipes_restart.json' 2023-11-29T14:51:15,829 adding 'tests/test_data/ephys_data/C010600C1-MT-C1.nwb' 2023-11-29T14:51:15,864 adding 'tests/test_data/mechanisms/CaDynamics_DC0.mod' 2023-11-29T14:51:15,866 adding 'tests/test_data/mechanisms/Ca_HVA2.mod' 2023-11-29T14:51:15,867 adding 'tests/test_data/mechanisms/Ca_LVAst.mod' 2023-11-29T14:51:15,868 adding 'tests/test_data/mechanisms/Ih.mod' 2023-11-29T14:51:15,870 adding 'tests/test_data/mechanisms/K_Pst.mod' 2023-11-29T14:51:15,871 adding 'tests/test_data/mechanisms/K_Tst.mod' 2023-11-29T14:51:15,872 adding 'tests/test_data/mechanisms/NaTg.mod' 2023-11-29T14:51:15,874 adding 'tests/test_data/mechanisms/Nap_Et2.mod' 2023-11-29T14:51:15,876 adding 'tests/test_data/mechanisms/SK_E2.mod' 2023-11-29T14:51:15,877 adding 'tests/test_data/mechanisms/SKv3_1.mod' 2023-11-29T14:51:15,950 adding 'tests/test_data/morphology/C060114A5.asc' 2023-11-29T14:51:15,956 adding 'tests/test_models/__init__.py' 2023-11-29T14:51:15,957 adding 'tests/test_models/dummycells.py' 2023-11-29T14:51:15,959 adding 'tests/unit_tests/__init__.py' 2023-11-29T14:51:15,962 adding 'tests/unit_tests/test_ecodes.py' 2023-11-29T14:51:15,963 adding 'tests/unit_tests/test_emodel_pipeline.py' 2023-11-29T14:51:15,965 adding 'tests/unit_tests/test_emodelmetadata.py' 2023-11-29T14:51:15,966 adding 'tests/unit_tests/test_evaluator.py' 2023-11-29T14:51:15,968 adding 'tests/unit_tests/test_fitness_calculator_configuration.py' 2023-11-29T14:51:15,969 adding 'tests/unit_tests/test_local_access_point.py' 2023-11-29T14:51:15,971 adding 'tests/unit_tests/test_model.py' 2023-11-29T14:51:15,972 adding 'tests/unit_tests/test_model_parameters_configuration.py' 2023-11-29T14:51:15,974 adding 'tests/unit_tests/test_optimisation.py' 2023-11-29T14:51:15,975 adding 'tests/unit_tests/test_plotting.py' 2023-11-29T14:51:15,976 adding 'tests/unit_tests/test_targets_configuration.py' 2023-11-29T14:51:15,978 adding 'tests/unit_tests/test_tools.py' 2023-11-29T14:51:15,979 adding 'tests/unit_tests/test_validation_functions.py' 2023-11-29T14:51:15,980 adding 'bluepyemodel-0.0.64.dist-info/AUTHORS.txt' 2023-11-29T14:51:15,982 adding 'bluepyemodel-0.0.64.dist-info/COPYING' 2023-11-29T14:51:15,983 adding 'bluepyemodel-0.0.64.dist-info/LICENSE.txt' 2023-11-29T14:51:15,985 adding 'bluepyemodel-0.0.64.dist-info/METADATA' 2023-11-29T14:51:15,986 adding 'bluepyemodel-0.0.64.dist-info/WHEEL' 2023-11-29T14:51:15,987 adding 'bluepyemodel-0.0.64.dist-info/top_level.txt' 2023-11-29T14:51:15,990 adding 'bluepyemodel-0.0.64.dist-info/RECORD' 2023-11-29T14:51:16,131 removing build/bdist.linux-aarch64/wheel 2023-11-29T14:51:16,323 Building wheel for bluepyemodel (setup.py): finished with status 'done' 2023-11-29T14:51:16,428 Created wheel for bluepyemodel: filename=bluepyemodel-0.0.64-py3-none-any.whl size=12440524 sha256=f64b377defedba6b6c8cfb8960dd0a90d563c38177c5f92e1b8297d2b2a2e14d 2023-11-29T14:51:16,429 Stored in directory: /tmp/pip-ephem-wheel-cache-3lvu8wc5/wheels/4c/c5/6a/282441872f8ab3c771291b3b78b543fa3d72acd171cbf415de 2023-11-29T14:51:16,453 Successfully built bluepyemodel 2023-11-29T14:51:16,786 Removed build tracker: '/tmp/pip-build-tracker-hnc9w8tb'