2023-12-01T19:44:47,863 Created temporary directory: /tmp/pip-build-tracker-1bjqtld0 2023-12-01T19:44:47,864 Initialized build tracking at /tmp/pip-build-tracker-1bjqtld0 2023-12-01T19:44:47,865 Created build tracker: /tmp/pip-build-tracker-1bjqtld0 2023-12-01T19:44:47,865 Entered build tracker: /tmp/pip-build-tracker-1bjqtld0 2023-12-01T19:44:47,866 Created temporary directory: /tmp/pip-wheel-8o0r75t7 2023-12-01T19:44:47,869 Created temporary directory: /tmp/pip-ephem-wheel-cache-ehac0gal 2023-12-01T19:44:47,893 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-01T19:44:47,897 2 location(s) to search for versions of cwl-utils: 2023-12-01T19:44:47,897 * https://pypi.org/simple/cwl-utils/ 2023-12-01T19:44:47,897 * https://www.piwheels.org/simple/cwl-utils/ 2023-12-01T19:44:47,898 Fetching project page and analyzing links: https://pypi.org/simple/cwl-utils/ 2023-12-01T19:44:47,899 Getting page https://pypi.org/simple/cwl-utils/ 2023-12-01T19:44:47,900 Found index url https://pypi.org/simple/ 2023-12-01T19:44:48,113 Fetched page https://pypi.org/simple/cwl-utils/ as application/vnd.pypi.simple.v1+json 2023-12-01T19:44:48,124 Found link https://files.pythonhosted.org/packages/0b/d6/9e1315cdaf68c85a4d94d1aae2c1cc50af122bca762588e8ae3c297f272b/cwl-utils-0.1.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.1 2023-12-01T19:44:48,125 Found link https://files.pythonhosted.org/packages/64/ca/a591b71c37c2e9aa50766dd98c8b8c32fd51325df81086f5e60201a788c3/cwl-utils-0.2.tar.gz (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6), version: 0.2 2023-12-01T19:44:48,126 Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/93/5c/a7b590dcd52f551d564704cce30a5d6e9f81b6225fb12b3bf51f87c1dada/cwl_utils-0.2-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.6) 2023-12-01T19:44:48,127 Found link 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Skipping link: No binaries permitted for cwl-utils: https://files.pythonhosted.org/packages/e3/cc/c0761ae4dab49d8fd263efaba8f79f66782357693e42500ea5d88213a72d/cwl_utils-0.32-py3-none-any.whl (from https://pypi.org/simple/cwl-utils/) (requires-python:>=3.8) 2023-12-01T19:44:48,173 Fetching project page and analyzing links: https://www.piwheels.org/simple/cwl-utils/ 2023-12-01T19:44:48,174 Getting page https://www.piwheels.org/simple/cwl-utils/ 2023-12-01T19:44:48,176 Found index url https://www.piwheels.org/simple/ 2023-12-01T19:44:48,328 Fetched page https://www.piwheels.org/simple/cwl-utils/ as text/html 2023-12-01T19:44:48,337 Skipping link: No binaries permitted for cwl-utils: https://www.piwheels.org/simple/cwl-utils/cwl_utils-0.31-py3-none-any.whl#sha256=005d250b8e9da23a69ff10fa74772b7c66220f5d7b8db69dd24701b8c1bdbd87 (from https://www.piwheels.org/simple/cwl-utils/) (requires-python:>=3.8) 2023-12-01T19:44:48,338 Skipping link: No binaries permitted for cwl-utils: 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2023-12-01T19:44:48,379 Given no hashes to check 1 links for project 'cwl-utils': discarding no candidates 2023-12-01T19:44:48,399 Collecting cwl-utils==0.32 2023-12-01T19:44:48,401 Created temporary directory: /tmp/pip-unpack-r93hfgm0 2023-12-01T19:44:48,611 Downloading cwl-utils-0.32.tar.gz (303 kB) 2023-12-01T19:44:49,111 Added cwl-utils==0.32 from https://files.pythonhosted.org/packages/45/8d/a0e5f14a39c4689b47a1f40abb9ca8cdd897b8b78d05bf7779de57ee2b90/cwl-utils-0.32.tar.gz to build tracker '/tmp/pip-build-tracker-1bjqtld0' 2023-12-01T19:44:49,113 Running setup.py (path:/tmp/pip-wheel-8o0r75t7/cwl-utils_07ce7922874445528d89943e82e0cfcc/setup.py) egg_info for package cwl-utils 2023-12-01T19:44:49,114 Created temporary directory: /tmp/pip-pip-egg-info-x490v4us 2023-12-01T19:44:49,115 Preparing metadata (setup.py): started 2023-12-01T19:44:49,116 Running command python setup.py egg_info 2023-12-01T19:44:50,206 running egg_info 2023-12-01T19:44:50,207 creating /tmp/pip-pip-egg-info-x490v4us/cwl_utils.egg-info 2023-12-01T19:44:50,233 writing /tmp/pip-pip-egg-info-x490v4us/cwl_utils.egg-info/PKG-INFO 2023-12-01T19:44:50,237 writing dependency_links to /tmp/pip-pip-egg-info-x490v4us/cwl_utils.egg-info/dependency_links.txt 2023-12-01T19:44:50,239 writing entry points to /tmp/pip-pip-egg-info-x490v4us/cwl_utils.egg-info/entry_points.txt 2023-12-01T19:44:50,241 writing requirements to /tmp/pip-pip-egg-info-x490v4us/cwl_utils.egg-info/requires.txt 2023-12-01T19:44:50,242 writing top-level names to /tmp/pip-pip-egg-info-x490v4us/cwl_utils.egg-info/top_level.txt 2023-12-01T19:44:50,244 writing manifest file '/tmp/pip-pip-egg-info-x490v4us/cwl_utils.egg-info/SOURCES.txt' 2023-12-01T19:44:50,334 reading manifest file '/tmp/pip-pip-egg-info-x490v4us/cwl_utils.egg-info/SOURCES.txt' 2023-12-01T19:44:50,336 reading manifest template 'MANIFEST.in' 2023-12-01T19:44:50,337 warning: no files found matching 'LICENSE.txt' 2023-12-01T19:44:50,352 warning: no previously-included files matching '*~' found anywhere in distribution 2023-12-01T19:44:50,352 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-12-01T19:44:50,359 writing manifest file '/tmp/pip-pip-egg-info-x490v4us/cwl_utils.egg-info/SOURCES.txt' 2023-12-01T19:44:50,470 Preparing metadata (setup.py): finished with status 'done' 2023-12-01T19:44:50,475 Source in /tmp/pip-wheel-8o0r75t7/cwl-utils_07ce7922874445528d89943e82e0cfcc has version 0.32, which satisfies requirement cwl-utils==0.32 from https://files.pythonhosted.org/packages/45/8d/a0e5f14a39c4689b47a1f40abb9ca8cdd897b8b78d05bf7779de57ee2b90/cwl-utils-0.32.tar.gz 2023-12-01T19:44:50,476 Removed cwl-utils==0.32 from https://files.pythonhosted.org/packages/45/8d/a0e5f14a39c4689b47a1f40abb9ca8cdd897b8b78d05bf7779de57ee2b90/cwl-utils-0.32.tar.gz from build tracker '/tmp/pip-build-tracker-1bjqtld0' 2023-12-01T19:44:50,483 Created temporary directory: /tmp/pip-unpack-xg6qmk5o 2023-12-01T19:44:50,484 Created temporary directory: /tmp/pip-unpack-biso898d 2023-12-01T19:44:50,500 Building wheels for collected packages: cwl-utils 2023-12-01T19:44:50,504 Created temporary directory: /tmp/pip-wheel-5dtgueec 2023-12-01T19:44:50,505 Building wheel for cwl-utils (setup.py): started 2023-12-01T19:44:50,506 Destination directory: /tmp/pip-wheel-5dtgueec 2023-12-01T19:44:50,507 Running command python setup.py bdist_wheel 2023-12-01T19:44:51,587 running bdist_wheel 2023-12-01T19:44:51,690 running build 2023-12-01T19:44:51,691 running build_py 2023-12-01T19:44:51,720 creating build 2023-12-01T19:44:51,721 creating build/lib 2023-12-01T19:44:51,722 creating build/lib/cwl_utils 2023-12-01T19:44:51,723 copying cwl_utils/pack.py -> build/lib/cwl_utils 2023-12-01T19:44:51,726 copying cwl_utils/cwl_v1_1_expression_refactor.py -> build/lib/cwl_utils 2023-12-01T19:44:51,731 copying cwl_utils/normalizer.py -> build/lib/cwl_utils 2023-12-01T19:44:51,733 copying cwl_utils/file_formats.py -> build/lib/cwl_utils 2023-12-01T19:44:51,735 copying cwl_utils/cwl_v1_2_expression_refactor.py -> build/lib/cwl_utils 2023-12-01T19:44:51,740 copying cwl_utils/__init__.py -> build/lib/cwl_utils 2023-12-01T19:44:51,742 copying cwl_utils/errors.py -> build/lib/cwl_utils 2023-12-01T19:44:51,744 copying cwl_utils/expression_refactor.py -> build/lib/cwl_utils 2023-12-01T19:44:51,746 copying cwl_utils/image_puller.py -> build/lib/cwl_utils 2023-12-01T19:44:51,749 copying cwl_utils/schemadef.py -> build/lib/cwl_utils 2023-12-01T19:44:51,751 copying cwl_utils/expression.py -> build/lib/cwl_utils 2023-12-01T19:44:51,754 copying cwl_utils/utils.py -> build/lib/cwl_utils 2023-12-01T19:44:51,756 copying cwl_utils/cwl_v1_0_expression_refactor.py -> build/lib/cwl_utils 2023-12-01T19:44:51,761 copying cwl_utils/types.py -> build/lib/cwl_utils 2023-12-01T19:44:51,762 copying cwl_utils/__meta__.py -> build/lib/cwl_utils 2023-12-01T19:44:51,764 copying cwl_utils/sandboxjs.py -> build/lib/cwl_utils 2023-12-01T19:44:51,767 copying cwl_utils/singularity.py -> build/lib/cwl_utils 2023-12-01T19:44:51,769 copying cwl_utils/docker_extract.py -> build/lib/cwl_utils 2023-12-01T19:44:51,771 copying cwl_utils/loghandler.py -> build/lib/cwl_utils 2023-12-01T19:44:51,773 copying cwl_utils/graph_split.py -> build/lib/cwl_utils 2023-12-01T19:44:51,775 copying cwl_utils/cite_extract.py -> build/lib/cwl_utils 2023-12-01T19:44:51,778 creating build/lib/cwl_utils/parser 2023-12-01T19:44:51,779 copying cwl_utils/parser/cwl_v1_1_utils.py -> build/lib/cwl_utils/parser 2023-12-01T19:44:51,782 copying cwl_utils/parser/__init__.py -> build/lib/cwl_utils/parser 2023-12-01T19:44:51,784 copying cwl_utils/parser/utils.py -> build/lib/cwl_utils/parser 2023-12-01T19:44:51,787 copying cwl_utils/parser/cwl_v1_0.py -> build/lib/cwl_utils/parser 2023-12-01T19:44:51,805 copying cwl_utils/parser/cwl_v1_2.py -> build/lib/cwl_utils/parser 2023-12-01T19:44:51,828 copying cwl_utils/parser/cwl_v1_2_utils.py -> build/lib/cwl_utils/parser 2023-12-01T19:44:51,831 copying cwl_utils/parser/cwl_v1_0_utils.py -> build/lib/cwl_utils/parser 2023-12-01T19:44:51,833 copying cwl_utils/parser/latest.py -> build/lib/cwl_utils/parser 2023-12-01T19:44:51,835 copying cwl_utils/parser/cwl_v1_1.py -> build/lib/cwl_utils/parser 2023-12-01T19:44:51,856 creating build/lib/cwl_utils/tests 2023-12-01T19:44:51,857 copying tests/test_graph_split.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,859 copying tests/test_js_sandbox.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,861 copying tests/test_format.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,863 copying tests/test_utils.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,865 copying tests/__init__.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,866 copying tests/test_parser.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,869 copying tests/util.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,870 copying tests/test_packing.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,872 copying tests/test_subscope.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,874 copying tests/test_docker_extract.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,876 copying tests/test_cite_extract.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,878 copying tests/test_examples.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,879 copying tests/test_meta.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,881 copying tests/test_parser_utils.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,884 copying tests/load_cwl_by_path.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,886 copying tests/test_etools_to_clt.py -> build/lib/cwl_utils/tests 2023-12-01T19:44:51,889 running egg_info 2023-12-01T19:44:51,949 writing cwl_utils.egg-info/PKG-INFO 2023-12-01T19:44:51,953 writing dependency_links to cwl_utils.egg-info/dependency_links.txt 2023-12-01T19:44:51,971 writing entry points to cwl_utils.egg-info/entry_points.txt 2023-12-01T19:44:51,973 writing requirements to cwl_utils.egg-info/requires.txt 2023-12-01T19:44:51,974 writing top-level names to cwl_utils.egg-info/top_level.txt 2023-12-01T19:44:52,008 reading manifest file 'cwl_utils.egg-info/SOURCES.txt' 2023-12-01T19:44:52,014 reading manifest template 'MANIFEST.in' 2023-12-01T19:44:52,015 warning: no files found matching 'LICENSE.txt' 2023-12-01T19:44:52,029 warning: no previously-included files matching '*~' found anywhere in distribution 2023-12-01T19:44:52,030 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-12-01T19:44:52,039 writing manifest file 'cwl_utils.egg-info/SOURCES.txt' 2023-12-01T19:44:52,043 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'cwl_utils.testdata.checker_wf' is absent from the `packages` configuration. 2023-12-01T19:44:52,044 !! 2023-12-01T19:44:52,045 ******************************************************************************** 2023-12-01T19:44:52,046 ############################ 2023-12-01T19:44:52,047 # Package would be ignored # 2023-12-01T19:44:52,047 ############################ 2023-12-01T19:44:52,048 Python recognizes 'cwl_utils.testdata.checker_wf' as an importable package[^1], 2023-12-01T19:44:52,048 but it is absent from setuptools' `packages` configuration. 2023-12-01T19:44:52,050 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-01T19:44:52,050 package, please make sure that 'cwl_utils.testdata.checker_wf' is explicitly added 2023-12-01T19:44:52,051 to the `packages` configuration field. 2023-12-01T19:44:52,052 Alternatively, you can also rely on setuptools' discovery methods 2023-12-01T19:44:52,052 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-01T19:44:52,053 instead of `find_packages(...)`/`find:`). 2023-12-01T19:44:52,054 You can read more about "package discovery" on setuptools documentation page: 2023-12-01T19:44:52,055 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-01T19:44:52,056 If you don't want 'cwl_utils.testdata.checker_wf' to be distributed and are 2023-12-01T19:44:52,057 already explicitly excluding 'cwl_utils.testdata.checker_wf' via 2023-12-01T19:44:52,058 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-01T19:44:52,058 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-01T19:44:52,059 combination with a more fine grained `package-data` configuration. 2023-12-01T19:44:52,060 You can read more about "package data files" on setuptools documentation page: 2023-12-01T19:44:52,061 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-01T19:44:52,062 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-01T19:44:52,062 even if it does not contain any `.py` files. 2023-12-01T19:44:52,063 On the other hand, currently there is no concept of package data 2023-12-01T19:44:52,063 directory, all directories are treated like packages. 2023-12-01T19:44:52,064 ******************************************************************************** 2023-12-01T19:44:52,065 !! 2023-12-01T19:44:52,065 check.warn(importable) 2023-12-01T19:44:52,066 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'cwl_utils.testdata.types' is absent from the `packages` configuration. 2023-12-01T19:44:52,067 !! 2023-12-01T19:44:52,068 ******************************************************************************** 2023-12-01T19:44:52,069 ############################ 2023-12-01T19:44:52,069 # Package would be ignored # 2023-12-01T19:44:52,070 ############################ 2023-12-01T19:44:52,070 Python recognizes 'cwl_utils.testdata.types' as an importable package[^1], 2023-12-01T19:44:52,071 but it is absent from setuptools' `packages` configuration. 2023-12-01T19:44:52,072 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-01T19:44:52,072 package, please make sure that 'cwl_utils.testdata.types' is explicitly added 2023-12-01T19:44:52,073 to the `packages` configuration field. 2023-12-01T19:44:52,074 Alternatively, you can also rely on setuptools' discovery methods 2023-12-01T19:44:52,074 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-01T19:44:52,075 instead of `find_packages(...)`/`find:`). 2023-12-01T19:44:52,076 You can read more about "package discovery" on setuptools documentation page: 2023-12-01T19:44:52,077 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-01T19:44:52,078 If you don't want 'cwl_utils.testdata.types' to be distributed and are 2023-12-01T19:44:52,079 already explicitly excluding 'cwl_utils.testdata.types' via 2023-12-01T19:44:52,079 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-01T19:44:52,080 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-01T19:44:52,080 combination with a more fine grained `package-data` configuration. 2023-12-01T19:44:52,081 You can read more about "package data files" on setuptools documentation page: 2023-12-01T19:44:52,082 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-01T19:44:52,084 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-01T19:44:52,084 even if it does not contain any `.py` files. 2023-12-01T19:44:52,085 On the other hand, currently there is no concept of package data 2023-12-01T19:44:52,085 directory, all directories are treated like packages. 2023-12-01T19:44:52,086 ******************************************************************************** 2023-12-01T19:44:52,087 !! 2023-12-01T19:44:52,088 check.warn(importable) 2023-12-01T19:44:52,089 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'cwl_utils.testdata.workflows' is absent from the `packages` configuration. 2023-12-01T19:44:52,089 !! 2023-12-01T19:44:52,090 ******************************************************************************** 2023-12-01T19:44:52,091 ############################ 2023-12-01T19:44:52,091 # Package would be ignored # 2023-12-01T19:44:52,091 ############################ 2023-12-01T19:44:52,092 Python recognizes 'cwl_utils.testdata.workflows' as an importable package[^1], 2023-12-01T19:44:52,092 but it is absent from setuptools' `packages` configuration. 2023-12-01T19:44:52,093 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-01T19:44:52,094 package, please make sure that 'cwl_utils.testdata.workflows' is explicitly added 2023-12-01T19:44:52,094 to the `packages` configuration field. 2023-12-01T19:44:52,095 Alternatively, you can also rely on setuptools' discovery methods 2023-12-01T19:44:52,096 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-01T19:44:52,096 instead of `find_packages(...)`/`find:`). 2023-12-01T19:44:52,097 You can read more about "package discovery" on setuptools documentation page: 2023-12-01T19:44:52,098 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-01T19:44:52,099 If you don't want 'cwl_utils.testdata.workflows' to be distributed and are 2023-12-01T19:44:52,100 already explicitly excluding 'cwl_utils.testdata.workflows' via 2023-12-01T19:44:52,101 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-01T19:44:52,101 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-01T19:44:52,102 combination with a more fine grained `package-data` configuration. 2023-12-01T19:44:52,103 You can read more about "package data files" on setuptools documentation page: 2023-12-01T19:44:52,104 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-01T19:44:52,105 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-01T19:44:52,106 even if it does not contain any `.py` files. 2023-12-01T19:44:52,106 On the other hand, currently there is no concept of package data 2023-12-01T19:44:52,107 directory, all directories are treated like packages. 2023-12-01T19:44:52,108 ******************************************************************************** 2023-12-01T19:44:52,109 !! 2023-12-01T19:44:52,109 check.warn(importable) 2023-12-01T19:44:52,110 copying cwl_utils/cwlNodeEngine.js -> build/lib/cwl_utils 2023-12-01T19:44:52,110 copying cwl_utils/cwlNodeEngineJSConsole.js -> build/lib/cwl_utils 2023-12-01T19:44:52,111 copying cwl_utils/cwlNodeEngineWithContext.js -> build/lib/cwl_utils 2023-12-01T19:44:52,111 copying cwl_utils/py.typed -> build/lib/cwl_utils 2023-12-01T19:44:52,112 creating build/lib/cwl_utils/testdata 2023-12-01T19:44:52,113 copying testdata/EDAM_subset.owl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,113 copying testdata/cond-single-source-wf-003.1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,114 copying testdata/cond-single-source-wf-004.1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,114 copying testdata/cond-single-source-wf-005.1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,115 copying testdata/cond-wf-003.1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,115 copying testdata/cond-wf-004.1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,116 copying testdata/cond-wf-005.1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,116 copying testdata/count-lines6-single-source-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,117 copying testdata/count-lines6-single-source-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,118 copying testdata/count-lines6-single-source-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,118 copying testdata/count-lines6-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,119 copying testdata/count-lines6-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,119 copying testdata/count-lines6-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,120 copying testdata/count-lines7-single-source-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,120 copying testdata/count-lines7-single-source-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,120 copying testdata/count-lines7-single-source-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,121 copying testdata/count-lines7-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,121 copying testdata/count-lines7-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,122 copying testdata/count-lines7-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,122 copying testdata/debian_image_id.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,123 copying testdata/dir4-job.yml -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,123 copying testdata/dockstore-tool-md5sum.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,124 copying testdata/dockstore-tool-md5sum_v11.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,126 copying testdata/dockstore-tool-md5sum_v12.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,128 copying testdata/echo-tool-packed.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,130 copying testdata/echo_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,132 copying testdata/echo_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,134 copying testdata/echo_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,137 copying testdata/env-job3.yaml -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,139 copying testdata/foo-array.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,141 copying testdata/foo.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,143 copying testdata/formattest-job.json -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,145 copying testdata/formattest2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,147 copying testdata/formattest2_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,149 copying testdata/formattest2_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,152 copying testdata/gx_edam.ttl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,154 copying testdata/js-expr-req-wf.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,156 copying testdata/lib.js -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,158 copying testdata/md5sum.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,160 copying testdata/md5sum.input -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,162 copying testdata/md5sum.json -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,164 copying testdata/md5sum_v11.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,166 copying testdata/md5sum_v12.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,168 copying testdata/nested-array-job.yml -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,170 copying testdata/record-output-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,172 copying testdata/record-output-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,174 copying testdata/record-output-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,177 copying testdata/record-output_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,179 copying testdata/record-output_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,182 copying testdata/record-output_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,184 copying testdata/revsort-run-1-packed.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,187 copying testdata/scatter-wf1_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,189 copying testdata/scatter-wf1_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,191 copying testdata/scatter-wf1_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,193 copying testdata/scatter-wf2_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,195 copying testdata/scatter-wf2_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,197 copying testdata/scatter-wf2_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,200 copying testdata/scatter-wf3_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,202 copying testdata/scatter-wf3_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,204 copying testdata/scatter-wf3_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,206 copying testdata/seqtk_seq.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,208 copying testdata/stdout-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,210 copying testdata/stdout-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,212 copying testdata/stdout-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,214 copying testdata/step-valuefrom2-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,217 copying testdata/step-valuefrom2-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,219 copying testdata/step-valuefrom2-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,221 copying testdata/step-valuefrom3-wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,223 copying testdata/step-valuefrom3-wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,225 copying testdata/step-valuefrom3-wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,227 copying testdata/step_valuefrom5_wf_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,230 copying testdata/step_valuefrom5_wf_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,232 copying testdata/step_valuefrom5_wf_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,234 copying testdata/step_valuefrom5_wf_with_id_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,236 copying testdata/step_valuefrom5_wf_with_id_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,238 copying testdata/step_valuefrom5_wf_with_id_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,240 copying testdata/wc3-tool_v1_0.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,242 copying testdata/wc3-tool_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,244 copying testdata/wc3-tool_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,246 copying testdata/wf2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,249 copying testdata/workflow_input_format_expr.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,251 copying testdata/workflow_input_format_expr_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,253 copying testdata/workflow_input_format_expr_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,255 copying testdata/workflow_input_sf_expr.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,258 copying testdata/workflow_input_sf_expr_array.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,260 copying testdata/workflow_input_sf_expr_array_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,263 copying testdata/workflow_input_sf_expr_array_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,265 copying testdata/workflow_input_sf_expr_v1_1.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,267 copying testdata/workflow_input_sf_expr_v1_2.cwl -> build/lib/cwl_utils/testdata 2023-12-01T19:44:52,270 creating build/lib/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,271 copying testdata/checker_wf/broken-wf.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,274 copying testdata/checker_wf/broken-wf2.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,276 copying testdata/checker_wf/broken-wf3.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,278 copying testdata/checker_wf/cat.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,280 copying testdata/checker_wf/echo.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,282 copying testdata/checker_wf/functional-wf.cwl -> build/lib/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,285 creating build/lib/cwl_utils/testdata/remote-cwl 2023-12-01T19:44:52,285 copying testdata/remote-cwl/tool1.cwl -> build/lib/cwl_utils/testdata/remote-cwl 2023-12-01T19:44:52,288 copying testdata/remote-cwl/tool2.cwl -> build/lib/cwl_utils/testdata/remote-cwl 2023-12-01T19:44:52,290 copying testdata/remote-cwl/wf1.cwl -> build/lib/cwl_utils/testdata/remote-cwl 2023-12-01T19:44:52,292 creating build/lib/cwl_utils/testdata/types 2023-12-01T19:44:52,293 copying testdata/types/array.yml -> build/lib/cwl_utils/testdata/types 2023-12-01T19:44:52,295 copying testdata/types/recursive.yml -> build/lib/cwl_utils/testdata/types 2023-12-01T19:44:52,297 copying testdata/types/singletype.yml -> build/lib/cwl_utils/testdata/types 2023-12-01T19:44:52,300 copying testdata/types/singletype2.yml -> build/lib/cwl_utils/testdata/types 2023-12-01T19:44:52,302 copying testdata/types/testtypes.yml -> build/lib/cwl_utils/testdata/types 2023-12-01T19:44:52,304 creating build/lib/cwl_utils/testdata/workflows 2023-12-01T19:44:52,305 copying testdata/workflows/count-lines16-wf.cwl -> build/lib/cwl_utils/testdata/workflows 2023-12-01T19:44:52,308 copying testdata/workflows/import-in-type.cwl -> build/lib/cwl_utils/testdata/workflows 2023-12-01T19:44:52,310 copying testdata/workflows/parseInt-tool.cwl -> build/lib/cwl_utils/testdata/workflows 2023-12-01T19:44:52,313 copying testdata/workflows/scatter-wf4.cwl -> build/lib/cwl_utils/testdata/workflows 2023-12-01T19:44:52,315 copying testdata/workflows/type-import.yaml -> build/lib/cwl_utils/testdata/workflows 2023-12-01T19:44:52,318 copying testdata/workflows/wc-tool.cwl -> build/lib/cwl_utils/testdata/workflows 2023-12-01T19:44:52,320 copying testdata/workflows/wf5.cwl -> build/lib/cwl_utils/testdata/workflows 2023-12-01T19:44:52,352 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-12-01T19:44:52,352 !! 2023-12-01T19:44:52,354 ******************************************************************************** 2023-12-01T19:44:52,354 Please avoid running ``setup.py`` directly. 2023-12-01T19:44:52,355 Instead, use pypa/build, pypa/installer or other 2023-12-01T19:44:52,356 standards-based tools. 2023-12-01T19:44:52,358 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-12-01T19:44:52,359 ******************************************************************************** 2023-12-01T19:44:52,360 !! 2023-12-01T19:44:52,361 self.initialize_options() 2023-12-01T19:44:52,379 installing to build/bdist.linux-aarch64/wheel 2023-12-01T19:44:52,380 running install 2023-12-01T19:44:52,404 running install_lib 2023-12-01T19:44:52,431 creating build/bdist.linux-aarch64 2023-12-01T19:44:52,432 creating build/bdist.linux-aarch64/wheel 2023-12-01T19:44:52,433 creating build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,434 copying build/lib/cwl_utils/pack.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,437 copying build/lib/cwl_utils/py.typed -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,439 copying build/lib/cwl_utils/cwlNodeEngineWithContext.js -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,442 copying build/lib/cwl_utils/cwl_v1_1_expression_refactor.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,446 copying build/lib/cwl_utils/normalizer.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,449 copying build/lib/cwl_utils/file_formats.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,451 copying build/lib/cwl_utils/cwl_v1_2_expression_refactor.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,456 creating build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,457 copying build/lib/cwl_utils/tests/test_graph_split.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,459 copying build/lib/cwl_utils/tests/test_js_sandbox.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,462 copying build/lib/cwl_utils/tests/test_format.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,464 copying build/lib/cwl_utils/tests/test_utils.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,466 copying build/lib/cwl_utils/tests/__init__.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,467 copying build/lib/cwl_utils/tests/test_parser.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,470 copying build/lib/cwl_utils/tests/util.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,471 copying build/lib/cwl_utils/tests/test_packing.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,473 copying build/lib/cwl_utils/tests/test_subscope.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,475 copying build/lib/cwl_utils/tests/test_docker_extract.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,477 copying build/lib/cwl_utils/tests/test_cite_extract.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,479 copying build/lib/cwl_utils/tests/test_examples.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,481 copying build/lib/cwl_utils/tests/test_meta.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,483 copying build/lib/cwl_utils/tests/test_parser_utils.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,486 copying build/lib/cwl_utils/tests/load_cwl_by_path.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,488 copying build/lib/cwl_utils/tests/test_etools_to_clt.py -> build/bdist.linux-aarch64/wheel/cwl_utils/tests 2023-12-01T19:44:52,491 copying build/lib/cwl_utils/__init__.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,493 copying build/lib/cwl_utils/errors.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,496 creating build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,497 copying build/lib/cwl_utils/testdata/count-lines7-single-source-wf_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,499 copying build/lib/cwl_utils/testdata/dir4-job.yml -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,502 copying build/lib/cwl_utils/testdata/revsort-run-1-packed.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,504 copying build/lib/cwl_utils/testdata/lib.js -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,506 copying build/lib/cwl_utils/testdata/cond-wf-005.1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,508 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,510 copying build/lib/cwl_utils/testdata/count-lines7-single-source-wf_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,512 copying build/lib/cwl_utils/testdata/foo.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,514 copying build/lib/cwl_utils/testdata/scatter-wf3_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,516 copying build/lib/cwl_utils/testdata/scatter-wf1_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,518 copying build/lib/cwl_utils/testdata/record-output-wf_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,520 copying build/lib/cwl_utils/testdata/count-lines7-wf_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,522 copying build/lib/cwl_utils/testdata/js-expr-req-wf.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,524 copying build/lib/cwl_utils/testdata/dockstore-tool-md5sum_v11.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,527 creating build/bdist.linux-aarch64/wheel/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,527 copying build/lib/cwl_utils/testdata/checker_wf/cat.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,530 copying build/lib/cwl_utils/testdata/checker_wf/broken-wf2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,531 copying build/lib/cwl_utils/testdata/checker_wf/broken-wf.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,533 copying build/lib/cwl_utils/testdata/checker_wf/echo.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,535 copying build/lib/cwl_utils/testdata/checker_wf/functional-wf.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,537 copying build/lib/cwl_utils/testdata/checker_wf/broken-wf3.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/checker_wf 2023-12-01T19:44:52,539 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,541 copying build/lib/cwl_utils/testdata/wc3-tool_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,543 copying build/lib/cwl_utils/testdata/debian_image_id.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,545 copying build/lib/cwl_utils/testdata/count-lines7-single-source-wf_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,547 copying build/lib/cwl_utils/testdata/formattest-job.json -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,549 copying build/lib/cwl_utils/testdata/md5sum_v11.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,551 copying build/lib/cwl_utils/testdata/count-lines7-wf_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,553 copying build/lib/cwl_utils/testdata/cond-wf-004.1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,555 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_array_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,557 copying build/lib/cwl_utils/testdata/record-output_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,559 copying build/lib/cwl_utils/testdata/wc3-tool_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,561 copying build/lib/cwl_utils/testdata/stdout-wf_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,563 copying build/lib/cwl_utils/testdata/record-output_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,565 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_array.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,567 copying build/lib/cwl_utils/testdata/echo_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,569 copying build/lib/cwl_utils/testdata/wf2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,571 copying build/lib/cwl_utils/testdata/cond-single-source-wf-003.1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,573 copying build/lib/cwl_utils/testdata/count-lines7-wf_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,575 copying build/lib/cwl_utils/testdata/count-lines6-wf_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,577 copying build/lib/cwl_utils/testdata/seqtk_seq.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,579 copying build/lib/cwl_utils/testdata/record-output_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,581 copying build/lib/cwl_utils/testdata/step-valuefrom2-wf_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,582 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,584 copying build/lib/cwl_utils/testdata/stdout-wf_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,586 copying build/lib/cwl_utils/testdata/count-lines6-single-source-wf_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,588 copying build/lib/cwl_utils/testdata/cond-single-source-wf-004.1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,590 copying build/lib/cwl_utils/testdata/cond-wf-003.1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,592 copying build/lib/cwl_utils/testdata/md5sum.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,594 creating build/bdist.linux-aarch64/wheel/cwl_utils/testdata/workflows 2023-12-01T19:44:52,595 copying build/lib/cwl_utils/testdata/workflows/type-import.yaml -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/workflows 2023-12-01T19:44:52,598 copying build/lib/cwl_utils/testdata/workflows/count-lines16-wf.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/workflows 2023-12-01T19:44:52,600 copying build/lib/cwl_utils/testdata/workflows/wf5.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/workflows 2023-12-01T19:44:52,601 copying build/lib/cwl_utils/testdata/workflows/import-in-type.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/workflows 2023-12-01T19:44:52,603 copying build/lib/cwl_utils/testdata/workflows/scatter-wf4.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/workflows 2023-12-01T19:44:52,605 copying build/lib/cwl_utils/testdata/workflows/parseInt-tool.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/workflows 2023-12-01T19:44:52,607 copying build/lib/cwl_utils/testdata/workflows/wc-tool.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/workflows 2023-12-01T19:44:52,610 creating build/bdist.linux-aarch64/wheel/cwl_utils/testdata/types 2023-12-01T19:44:52,611 copying build/lib/cwl_utils/testdata/types/singletype2.yml -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/types 2023-12-01T19:44:52,613 copying build/lib/cwl_utils/testdata/types/singletype.yml -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/types 2023-12-01T19:44:52,615 copying build/lib/cwl_utils/testdata/types/recursive.yml -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/types 2023-12-01T19:44:52,617 copying build/lib/cwl_utils/testdata/types/testtypes.yml -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/types 2023-12-01T19:44:52,619 copying build/lib/cwl_utils/testdata/types/array.yml -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/types 2023-12-01T19:44:52,621 copying build/lib/cwl_utils/testdata/record-output-wf_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,623 copying build/lib/cwl_utils/testdata/echo_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,625 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,627 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,629 copying build/lib/cwl_utils/testdata/step-valuefrom2-wf_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,631 copying build/lib/cwl_utils/testdata/record-output-wf_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,633 copying build/lib/cwl_utils/testdata/foo-array.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,635 copying build/lib/cwl_utils/testdata/scatter-wf1_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,637 copying build/lib/cwl_utils/testdata/md5sum_v12.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,638 copying build/lib/cwl_utils/testdata/EDAM_subset.owl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,642 copying build/lib/cwl_utils/testdata/dockstore-tool-md5sum.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,644 copying build/lib/cwl_utils/testdata/env-job3.yaml -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,646 copying build/lib/cwl_utils/testdata/stdout-wf_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,647 copying build/lib/cwl_utils/testdata/echo-tool-packed.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,649 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,651 copying build/lib/cwl_utils/testdata/step-valuefrom3-wf_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,653 copying build/lib/cwl_utils/testdata/nested-array-job.yml -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,655 copying build/lib/cwl_utils/testdata/scatter-wf2_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,657 copying build/lib/cwl_utils/testdata/echo_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,659 creating build/bdist.linux-aarch64/wheel/cwl_utils/testdata/remote-cwl 2023-12-01T19:44:52,660 copying build/lib/cwl_utils/testdata/remote-cwl/tool2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/remote-cwl 2023-12-01T19:44:52,662 copying build/lib/cwl_utils/testdata/remote-cwl/wf1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/remote-cwl 2023-12-01T19:44:52,664 copying build/lib/cwl_utils/testdata/remote-cwl/tool1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata/remote-cwl 2023-12-01T19:44:52,666 copying build/lib/cwl_utils/testdata/formattest2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,668 copying build/lib/cwl_utils/testdata/scatter-wf2_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,670 copying build/lib/cwl_utils/testdata/count-lines6-single-source-wf_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,672 copying build/lib/cwl_utils/testdata/workflow_input_format_expr_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,674 copying build/lib/cwl_utils/testdata/step-valuefrom3-wf_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,676 copying build/lib/cwl_utils/testdata/cond-single-source-wf-005.1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,678 copying build/lib/cwl_utils/testdata/gx_edam.ttl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,681 copying build/lib/cwl_utils/testdata/dockstore-tool-md5sum_v12.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,683 copying build/lib/cwl_utils/testdata/scatter-wf1_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,685 copying build/lib/cwl_utils/testdata/count-lines6-single-source-wf_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,688 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,690 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,693 copying build/lib/cwl_utils/testdata/md5sum.input -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,695 copying build/lib/cwl_utils/testdata/step-valuefrom2-wf_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,698 copying build/lib/cwl_utils/testdata/workflow_input_format_expr.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,700 copying build/lib/cwl_utils/testdata/formattest2_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,703 copying build/lib/cwl_utils/testdata/md5sum.json -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,705 copying build/lib/cwl_utils/testdata/workflow_input_format_expr_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,707 copying build/lib/cwl_utils/testdata/workflow_input_sf_expr_array_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,710 copying build/lib/cwl_utils/testdata/scatter-wf3_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,712 copying build/lib/cwl_utils/testdata/count-lines6-wf_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,714 copying build/lib/cwl_utils/testdata/step-valuefrom3-wf_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,717 copying build/lib/cwl_utils/testdata/scatter-wf2_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,719 copying build/lib/cwl_utils/testdata/scatter-wf3_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,722 copying build/lib/cwl_utils/testdata/formattest2_v1_0.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,724 copying build/lib/cwl_utils/testdata/wc3-tool_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,726 copying build/lib/cwl_utils/testdata/count-lines6-wf_v1_1.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,729 copying build/lib/cwl_utils/testdata/step_valuefrom5_wf_v1_2.cwl -> build/bdist.linux-aarch64/wheel/cwl_utils/testdata 2023-12-01T19:44:52,731 copying build/lib/cwl_utils/expression_refactor.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,734 copying build/lib/cwl_utils/image_puller.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,737 copying build/lib/cwl_utils/schemadef.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,739 copying build/lib/cwl_utils/expression.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,742 copying build/lib/cwl_utils/utils.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,745 copying build/lib/cwl_utils/cwl_v1_0_expression_refactor.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,749 copying build/lib/cwl_utils/types.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,751 copying build/lib/cwl_utils/__meta__.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,754 copying build/lib/cwl_utils/cwlNodeEngine.js -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,756 copying build/lib/cwl_utils/sandboxjs.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,759 copying build/lib/cwl_utils/singularity.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,762 copying build/lib/cwl_utils/docker_extract.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,765 copying build/lib/cwl_utils/loghandler.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,767 creating build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,769 copying build/lib/cwl_utils/parser/cwl_v1_1_utils.py -> build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,772 copying build/lib/cwl_utils/parser/__init__.py -> build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,775 copying build/lib/cwl_utils/parser/utils.py -> build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,778 copying build/lib/cwl_utils/parser/cwl_v1_0.py -> build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,802 copying build/lib/cwl_utils/parser/cwl_v1_2.py -> build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,822 copying build/lib/cwl_utils/parser/cwl_v1_2_utils.py -> build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,825 copying build/lib/cwl_utils/parser/cwl_v1_0_utils.py -> build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,829 copying build/lib/cwl_utils/parser/latest.py -> build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,831 copying build/lib/cwl_utils/parser/cwl_v1_1.py -> build/bdist.linux-aarch64/wheel/cwl_utils/parser 2023-12-01T19:44:52,854 copying build/lib/cwl_utils/graph_split.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,856 copying build/lib/cwl_utils/cite_extract.py -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,858 copying build/lib/cwl_utils/cwlNodeEngineJSConsole.js -> build/bdist.linux-aarch64/wheel/cwl_utils 2023-12-01T19:44:52,860 running install_egg_info 2023-12-01T19:44:52,891 Copying cwl_utils.egg-info to build/bdist.linux-aarch64/wheel/cwl_utils-0.32-py3.11.egg-info 2023-12-01T19:44:52,905 running install_scripts 2023-12-01T19:44:52,922 creating build/bdist.linux-aarch64/wheel/cwl_utils-0.32.dist-info/WHEEL 2023-12-01T19:44:52,925 creating '/tmp/pip-wheel-5dtgueec/cwl_utils-0.32-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it 2023-12-01T19:44:52,928 adding 'cwl_utils/__init__.py' 2023-12-01T19:44:52,929 adding 'cwl_utils/__meta__.py' 2023-12-01T19:44:52,931 adding 'cwl_utils/cite_extract.py' 2023-12-01T19:44:52,932 adding 'cwl_utils/cwlNodeEngine.js' 2023-12-01T19:44:52,934 adding 'cwl_utils/cwlNodeEngineJSConsole.js' 2023-12-01T19:44:52,935 adding 'cwl_utils/cwlNodeEngineWithContext.js' 2023-12-01T19:44:52,943 adding 'cwl_utils/cwl_v1_0_expression_refactor.py' 2023-12-01T19:44:52,952 adding 'cwl_utils/cwl_v1_1_expression_refactor.py' 2023-12-01T19:44:52,961 adding 'cwl_utils/cwl_v1_2_expression_refactor.py' 2023-12-01T19:44:52,963 adding 'cwl_utils/docker_extract.py' 2023-12-01T19:44:52,965 adding 'cwl_utils/errors.py' 2023-12-01T19:44:52,967 adding 'cwl_utils/expression.py' 2023-12-01T19:44:52,969 adding 'cwl_utils/expression_refactor.py' 2023-12-01T19:44:52,970 adding 'cwl_utils/file_formats.py' 2023-12-01T19:44:52,972 adding 'cwl_utils/graph_split.py' 2023-12-01T19:44:52,974 adding 'cwl_utils/image_puller.py' 2023-12-01T19:44:52,975 adding 'cwl_utils/loghandler.py' 2023-12-01T19:44:52,976 adding 'cwl_utils/normalizer.py' 2023-12-01T19:44:52,978 adding 'cwl_utils/pack.py' 2023-12-01T19:44:52,979 adding 'cwl_utils/py.typed' 2023-12-01T19:44:52,983 adding 'cwl_utils/sandboxjs.py' 2023-12-01T19:44:52,985 adding 'cwl_utils/schemadef.py' 2023-12-01T19:44:52,986 adding 'cwl_utils/singularity.py' 2023-12-01T19:44:52,988 adding 'cwl_utils/types.py' 2023-12-01T19:44:52,990 adding 'cwl_utils/utils.py' 2023-12-01T19:44:52,993 adding 'cwl_utils/parser/__init__.py' 2023-12-01T19:44:53,031 adding 'cwl_utils/parser/cwl_v1_0.py' 2023-12-01T19:44:53,039 adding 'cwl_utils/parser/cwl_v1_0_utils.py' 2023-12-01T19:44:53,082 adding 'cwl_utils/parser/cwl_v1_1.py' 2023-12-01T19:44:53,091 adding 'cwl_utils/parser/cwl_v1_1_utils.py' 2023-12-01T19:44:53,138 adding 'cwl_utils/parser/cwl_v1_2.py' 2023-12-01T19:44:53,147 adding 'cwl_utils/parser/cwl_v1_2_utils.py' 2023-12-01T19:44:53,149 adding 'cwl_utils/parser/latest.py' 2023-12-01T19:44:53,151 adding 'cwl_utils/parser/utils.py' 2023-12-01T19:44:53,157 adding 'cwl_utils/testdata/EDAM_subset.owl' 2023-12-01T19:44:53,159 adding 'cwl_utils/testdata/cond-single-source-wf-003.1.cwl' 2023-12-01T19:44:53,160 adding 'cwl_utils/testdata/cond-single-source-wf-004.1.cwl' 2023-12-01T19:44:53,161 adding 'cwl_utils/testdata/cond-single-source-wf-005.1.cwl' 2023-12-01T19:44:53,163 adding 'cwl_utils/testdata/cond-wf-003.1.cwl' 2023-12-01T19:44:53,164 adding 'cwl_utils/testdata/cond-wf-004.1.cwl' 2023-12-01T19:44:53,165 adding 'cwl_utils/testdata/cond-wf-005.1.cwl' 2023-12-01T19:44:53,166 adding 'cwl_utils/testdata/count-lines6-single-source-wf_v1_0.cwl' 2023-12-01T19:44:53,168 adding 'cwl_utils/testdata/count-lines6-single-source-wf_v1_1.cwl' 2023-12-01T19:44:53,169 adding 'cwl_utils/testdata/count-lines6-single-source-wf_v1_2.cwl' 2023-12-01T19:44:53,170 adding 'cwl_utils/testdata/count-lines6-wf_v1_0.cwl' 2023-12-01T19:44:53,171 adding 'cwl_utils/testdata/count-lines6-wf_v1_1.cwl' 2023-12-01T19:44:53,172 adding 'cwl_utils/testdata/count-lines6-wf_v1_2.cwl' 2023-12-01T19:44:53,174 adding 'cwl_utils/testdata/count-lines7-single-source-wf_v1_0.cwl' 2023-12-01T19:44:53,175 adding 'cwl_utils/testdata/count-lines7-single-source-wf_v1_1.cwl' 2023-12-01T19:44:53,176 adding 'cwl_utils/testdata/count-lines7-single-source-wf_v1_2.cwl' 2023-12-01T19:44:53,177 adding 'cwl_utils/testdata/count-lines7-wf_v1_0.cwl' 2023-12-01T19:44:53,179 adding 'cwl_utils/testdata/count-lines7-wf_v1_1.cwl' 2023-12-01T19:44:53,180 adding 'cwl_utils/testdata/count-lines7-wf_v1_2.cwl' 2023-12-01T19:44:53,181 adding 'cwl_utils/testdata/debian_image_id.cwl' 2023-12-01T19:44:53,182 adding 'cwl_utils/testdata/dir4-job.yml' 2023-12-01T19:44:53,184 adding 'cwl_utils/testdata/dockstore-tool-md5sum.cwl' 2023-12-01T19:44:53,185 adding 'cwl_utils/testdata/dockstore-tool-md5sum_v11.cwl' 2023-12-01T19:44:53,186 adding 'cwl_utils/testdata/dockstore-tool-md5sum_v12.cwl' 2023-12-01T19:44:53,188 adding 'cwl_utils/testdata/echo-tool-packed.cwl' 2023-12-01T19:44:53,189 adding 'cwl_utils/testdata/echo_v1_0.cwl' 2023-12-01T19:44:53,190 adding 'cwl_utils/testdata/echo_v1_1.cwl' 2023-12-01T19:44:53,192 adding 'cwl_utils/testdata/echo_v1_2.cwl' 2023-12-01T19:44:53,193 adding 'cwl_utils/testdata/env-job3.yaml' 2023-12-01T19:44:53,194 adding 'cwl_utils/testdata/foo-array.cwl' 2023-12-01T19:44:53,196 adding 'cwl_utils/testdata/foo.cwl' 2023-12-01T19:44:53,197 adding 'cwl_utils/testdata/formattest-job.json' 2023-12-01T19:44:53,198 adding 'cwl_utils/testdata/formattest2.cwl' 2023-12-01T19:44:53,200 adding 'cwl_utils/testdata/formattest2_v1_0.cwl' 2023-12-01T19:44:53,201 adding 'cwl_utils/testdata/formattest2_v1_1.cwl' 2023-12-01T19:44:53,202 adding 'cwl_utils/testdata/gx_edam.ttl' 2023-12-01T19:44:53,204 adding 'cwl_utils/testdata/js-expr-req-wf.cwl' 2023-12-01T19:44:53,205 adding 'cwl_utils/testdata/lib.js' 2023-12-01T19:44:53,206 adding 'cwl_utils/testdata/md5sum.cwl' 2023-12-01T19:44:53,207 adding 'cwl_utils/testdata/md5sum.input' 2023-12-01T19:44:53,209 adding 'cwl_utils/testdata/md5sum.json' 2023-12-01T19:44:53,210 adding 'cwl_utils/testdata/md5sum_v11.cwl' 2023-12-01T19:44:53,211 adding 'cwl_utils/testdata/md5sum_v12.cwl' 2023-12-01T19:44:53,212 adding 'cwl_utils/testdata/nested-array-job.yml' 2023-12-01T19:44:53,214 adding 'cwl_utils/testdata/record-output-wf_v1_0.cwl' 2023-12-01T19:44:53,215 adding 'cwl_utils/testdata/record-output-wf_v1_1.cwl' 2023-12-01T19:44:53,216 adding 'cwl_utils/testdata/record-output-wf_v1_2.cwl' 2023-12-01T19:44:53,217 adding 'cwl_utils/testdata/record-output_v1_0.cwl' 2023-12-01T19:44:53,219 adding 'cwl_utils/testdata/record-output_v1_1.cwl' 2023-12-01T19:44:53,220 adding 'cwl_utils/testdata/record-output_v1_2.cwl' 2023-12-01T19:44:53,222 adding 'cwl_utils/testdata/revsort-run-1-packed.cwl' 2023-12-01T19:44:53,223 adding 'cwl_utils/testdata/scatter-wf1_v1_0.cwl' 2023-12-01T19:44:53,224 adding 'cwl_utils/testdata/scatter-wf1_v1_1.cwl' 2023-12-01T19:44:53,225 adding 'cwl_utils/testdata/scatter-wf1_v1_2.cwl' 2023-12-01T19:44:53,227 adding 'cwl_utils/testdata/scatter-wf2_v1_0.cwl' 2023-12-01T19:44:53,228 adding 'cwl_utils/testdata/scatter-wf2_v1_1.cwl' 2023-12-01T19:44:53,230 adding 'cwl_utils/testdata/scatter-wf2_v1_2.cwl' 2023-12-01T19:44:53,231 adding 'cwl_utils/testdata/scatter-wf3_v1_0.cwl' 2023-12-01T19:44:53,232 adding 'cwl_utils/testdata/scatter-wf3_v1_1.cwl' 2023-12-01T19:44:53,233 adding 'cwl_utils/testdata/scatter-wf3_v1_2.cwl' 2023-12-01T19:44:53,235 adding 'cwl_utils/testdata/seqtk_seq.cwl' 2023-12-01T19:44:53,236 adding 'cwl_utils/testdata/stdout-wf_v1_0.cwl' 2023-12-01T19:44:53,237 adding 'cwl_utils/testdata/stdout-wf_v1_1.cwl' 2023-12-01T19:44:53,238 adding 'cwl_utils/testdata/stdout-wf_v1_2.cwl' 2023-12-01T19:44:53,239 adding 'cwl_utils/testdata/step-valuefrom2-wf_v1_0.cwl' 2023-12-01T19:44:53,241 adding 'cwl_utils/testdata/step-valuefrom2-wf_v1_1.cwl' 2023-12-01T19:44:53,242 adding 'cwl_utils/testdata/step-valuefrom2-wf_v1_2.cwl' 2023-12-01T19:44:53,243 adding 'cwl_utils/testdata/step-valuefrom3-wf_v1_0.cwl' 2023-12-01T19:44:53,245 adding 'cwl_utils/testdata/step-valuefrom3-wf_v1_1.cwl' 2023-12-01T19:44:53,246 adding 'cwl_utils/testdata/step-valuefrom3-wf_v1_2.cwl' 2023-12-01T19:44:53,247 adding 'cwl_utils/testdata/step_valuefrom5_wf_v1_0.cwl' 2023-12-01T19:44:53,249 adding 'cwl_utils/testdata/step_valuefrom5_wf_v1_1.cwl' 2023-12-01T19:44:53,250 adding 'cwl_utils/testdata/step_valuefrom5_wf_v1_2.cwl' 2023-12-01T19:44:53,252 adding 'cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_0.cwl' 2023-12-01T19:44:53,253 adding 'cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_1.cwl' 2023-12-01T19:44:53,254 adding 'cwl_utils/testdata/step_valuefrom5_wf_with_id_v1_2.cwl' 2023-12-01T19:44:53,255 adding 'cwl_utils/testdata/wc3-tool_v1_0.cwl' 2023-12-01T19:44:53,257 adding 'cwl_utils/testdata/wc3-tool_v1_1.cwl' 2023-12-01T19:44:53,258 adding 'cwl_utils/testdata/wc3-tool_v1_2.cwl' 2023-12-01T19:44:53,259 adding 'cwl_utils/testdata/wf2.cwl' 2023-12-01T19:44:53,260 adding 'cwl_utils/testdata/workflow_input_format_expr.cwl' 2023-12-01T19:44:53,262 adding 'cwl_utils/testdata/workflow_input_format_expr_v1_1.cwl' 2023-12-01T19:44:53,263 adding 'cwl_utils/testdata/workflow_input_format_expr_v1_2.cwl' 2023-12-01T19:44:53,264 adding 'cwl_utils/testdata/workflow_input_sf_expr.cwl' 2023-12-01T19:44:53,266 adding 'cwl_utils/testdata/workflow_input_sf_expr_array.cwl' 2023-12-01T19:44:53,267 adding 'cwl_utils/testdata/workflow_input_sf_expr_array_v1_1.cwl' 2023-12-01T19:44:53,268 adding 'cwl_utils/testdata/workflow_input_sf_expr_array_v1_2.cwl' 2023-12-01T19:44:53,269 adding 'cwl_utils/testdata/workflow_input_sf_expr_v1_1.cwl' 2023-12-01T19:44:53,271 adding 'cwl_utils/testdata/workflow_input_sf_expr_v1_2.cwl' 2023-12-01T19:44:53,273 adding 'cwl_utils/testdata/checker_wf/broken-wf.cwl' 2023-12-01T19:44:53,274 adding 'cwl_utils/testdata/checker_wf/broken-wf2.cwl' 2023-12-01T19:44:53,276 adding 'cwl_utils/testdata/checker_wf/broken-wf3.cwl' 2023-12-01T19:44:53,277 adding 'cwl_utils/testdata/checker_wf/cat.cwl' 2023-12-01T19:44:53,278 adding 'cwl_utils/testdata/checker_wf/echo.cwl' 2023-12-01T19:44:53,280 adding 'cwl_utils/testdata/checker_wf/functional-wf.cwl' 2023-12-01T19:44:53,282 adding 'cwl_utils/testdata/remote-cwl/tool1.cwl' 2023-12-01T19:44:53,283 adding 'cwl_utils/testdata/remote-cwl/tool2.cwl' 2023-12-01T19:44:53,284 adding 'cwl_utils/testdata/remote-cwl/wf1.cwl' 2023-12-01T19:44:53,286 adding 'cwl_utils/testdata/types/array.yml' 2023-12-01T19:44:53,288 adding 'cwl_utils/testdata/types/recursive.yml' 2023-12-01T19:44:53,289 adding 'cwl_utils/testdata/types/singletype.yml' 2023-12-01T19:44:53,290 adding 'cwl_utils/testdata/types/singletype2.yml' 2023-12-01T19:44:53,291 adding 'cwl_utils/testdata/types/testtypes.yml' 2023-12-01T19:44:53,293 adding 'cwl_utils/testdata/workflows/count-lines16-wf.cwl' 2023-12-01T19:44:53,295 adding 'cwl_utils/testdata/workflows/import-in-type.cwl' 2023-12-01T19:44:53,296 adding 'cwl_utils/testdata/workflows/parseInt-tool.cwl' 2023-12-01T19:44:53,297 adding 'cwl_utils/testdata/workflows/scatter-wf4.cwl' 2023-12-01T19:44:53,299 adding 'cwl_utils/testdata/workflows/type-import.yaml' 2023-12-01T19:44:53,300 adding 'cwl_utils/testdata/workflows/wc-tool.cwl' 2023-12-01T19:44:53,301 adding 'cwl_utils/testdata/workflows/wf5.cwl' 2023-12-01T19:44:53,303 adding 'cwl_utils/tests/__init__.py' 2023-12-01T19:44:53,304 adding 'cwl_utils/tests/load_cwl_by_path.py' 2023-12-01T19:44:53,306 adding 'cwl_utils/tests/test_cite_extract.py' 2023-12-01T19:44:53,307 adding 'cwl_utils/tests/test_docker_extract.py' 2023-12-01T19:44:53,308 adding 'cwl_utils/tests/test_etools_to_clt.py' 2023-12-01T19:44:53,310 adding 'cwl_utils/tests/test_examples.py' 2023-12-01T19:44:53,311 adding 'cwl_utils/tests/test_format.py' 2023-12-01T19:44:53,313 adding 'cwl_utils/tests/test_graph_split.py' 2023-12-01T19:44:53,314 adding 'cwl_utils/tests/test_js_sandbox.py' 2023-12-01T19:44:53,315 adding 'cwl_utils/tests/test_meta.py' 2023-12-01T19:44:53,317 adding 'cwl_utils/tests/test_packing.py' 2023-12-01T19:44:53,318 adding 'cwl_utils/tests/test_parser.py' 2023-12-01T19:44:53,321 adding 'cwl_utils/tests/test_parser_utils.py' 2023-12-01T19:44:53,323 adding 'cwl_utils/tests/test_subscope.py' 2023-12-01T19:44:53,324 adding 'cwl_utils/tests/test_utils.py' 2023-12-01T19:44:53,326 adding 'cwl_utils/tests/util.py' 2023-12-01T19:44:53,328 adding 'cwl_utils-0.32.dist-info/METADATA' 2023-12-01T19:44:53,329 adding 'cwl_utils-0.32.dist-info/WHEEL' 2023-12-01T19:44:53,330 adding 'cwl_utils-0.32.dist-info/entry_points.txt' 2023-12-01T19:44:53,331 adding 'cwl_utils-0.32.dist-info/top_level.txt' 2023-12-01T19:44:53,334 adding 'cwl_utils-0.32.dist-info/RECORD' 2023-12-01T19:44:53,342 removing build/bdist.linux-aarch64/wheel 2023-12-01T19:44:53,497 Building wheel for cwl-utils (setup.py): finished with status 'done' 2023-12-01T19:44:53,503 Created wheel for cwl-utils: filename=cwl_utils-0.32-py3-none-any.whl size=356527 sha256=bc59a9b738ef81bdddd7dc1adaa8b7bae05788e862b335ada742bad632f05553 2023-12-01T19:44:53,505 Stored in directory: /tmp/pip-ephem-wheel-cache-ehac0gal/wheels/fc/29/ff/5cd9d37a2b0cda2f7024e997e8ec000d7255a388cf504f7d97 2023-12-01T19:44:53,523 Successfully built cwl-utils 2023-12-01T19:44:53,537 Removed build tracker: '/tmp/pip-build-tracker-1bjqtld0'