2023-12-01T21:51:41,556 Created temporary directory: /tmp/pip-build-tracker-f_05bl23
2023-12-01T21:51:41,557 Initialized build tracking at /tmp/pip-build-tracker-f_05bl23
2023-12-01T21:51:41,558 Created build tracker: /tmp/pip-build-tracker-f_05bl23
2023-12-01T21:51:41,558 Entered build tracker: /tmp/pip-build-tracker-f_05bl23
2023-12-01T21:51:41,559 Created temporary directory: /tmp/pip-wheel-1hl9hmmm
2023-12-01T21:51:41,562 Created temporary directory: /tmp/pip-ephem-wheel-cache-ne6dao9r
2023-12-01T21:51:41,589 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-01T21:51:41,593 2 location(s) to search for versions of sigprofilermatrixgenerator:
2023-12-01T21:51:41,593 * https://pypi.org/simple/sigprofilermatrixgenerator/
2023-12-01T21:51:41,593 * https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2023-12-01T21:51:41,594 Fetching project page and analyzing links: https://pypi.org/simple/sigprofilermatrixgenerator/
2023-12-01T21:51:41,594 Getting page https://pypi.org/simple/sigprofilermatrixgenerator/
2023-12-01T21:51:41,596 Found index url https://pypi.org/simple/
2023-12-01T21:51:41,820 Fetched page https://pypi.org/simple/sigprofilermatrixgenerator/ as application/vnd.pypi.simple.v1+json
2023-12-01T21:51:41,845   Found link https://files.pythonhosted.org/packages/c7/6a/28ddff4162d24d6994148c515057e5bfc71bb0183721f1ca875f6cc3c98a/SigProfilerMatrixGenerator-0.1.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.1
2023-12-01T21:51:41,846   Found link https://files.pythonhosted.org/packages/09/e0/a27c3a87eaa67985ed16425b07c6d0dbb9f2ed0bb370964a5eea8be9dc91/SigProfilerMatrixGenerator-0.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.2
2023-12-01T21:51:41,847   Found link https://files.pythonhosted.org/packages/bd/dd/b943503008f3dcda163b33e9402f52439b23c6b036cb328bcd37d6e7d010/SigProfilerMatrixGenerator-0.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.3
2023-12-01T21:51:41,847   Found link https://files.pythonhosted.org/packages/18/52/e8df4d5c50b73bee8f9ac77f5b30e1706176258c27c9ef81b20f467e3f60/SigProfilerMatrixGenerator-0.1.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.4
2023-12-01T21:51:41,848   Found link https://files.pythonhosted.org/packages/17/7b/f57ee232ba6fd2a0c0d49ce3777af69dea21e0ef979664825fbfd6e15d72/SigProfilerMatrixGenerator-0.1.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.5
2023-12-01T21:51:41,849   Found link https://files.pythonhosted.org/packages/7d/ea/fcb33c23e6653c3c50d6b438eb03cba08321e36d245b0642e4f4f29facd9/SigProfilerMatrixGenerator-0.1.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.6
2023-12-01T21:51:41,850   Found link https://files.pythonhosted.org/packages/f4/a3/770fcf7b2863289ff8d37137be8acc20995c64664d47dcd110dcaa8eedfb/SigProfilerMatrixGenerator-0.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.7
2023-12-01T21:51:41,851   Found link https://files.pythonhosted.org/packages/a9/0c/ae900daf1713185f851a882aafab8dbdf75cdd979fac87ac8b028ea3228e/SigProfilerMatrixGenerator-0.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.8
2023-12-01T21:51:41,851   Found link https://files.pythonhosted.org/packages/f9/58/915584f3317f44676353a359f2a91956fe9a1b4a7347487c0a6fe557b662/SigProfilerMatrixGenerator-0.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.9
2023-12-01T21:51:41,852   Found link https://files.pythonhosted.org/packages/e6/3a/9de0d7a6d81bcd6cf9386555aa3d0c8d9976927c066c9d05ce90fcc35f49/SigProfilerMatrixGenerator-0.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.10
2023-12-01T21:51:41,853   Found link https://files.pythonhosted.org/packages/a1/1f/2e6637742e6d3ef7aa0c36a946495fa8735826daadb50ae1939c6509bcb8/SigProfilerMatrixGenerator-0.1.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.11
2023-12-01T21:51:41,854   Found link https://files.pythonhosted.org/packages/9c/b9/5145722e31781332e84eba772a625e97101c77ac297e3f1c61384cee8f93/SigProfilerMatrixGenerator-0.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.12
2023-12-01T21:51:41,855   Found link https://files.pythonhosted.org/packages/56/03/e9e9b0dd8a36620b30677a94c2966d625c077727ab3c7c5ce657b75ddab1/SigProfilerMatrixGenerator-0.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.13
2023-12-01T21:51:41,855   Found link https://files.pythonhosted.org/packages/34/fc/a637b67b91bbc04cddaed487535962978a25e50face12c79da107a72e643/SigProfilerMatrixGenerator-0.1.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.14
2023-12-01T21:51:41,856   Found link https://files.pythonhosted.org/packages/be/d6/3678d80d2770647ee4ee99d672562fbe83e2ddebe4021ffdbe951410981e/SigProfilerMatrixGenerator-0.1.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.15
2023-12-01T21:51:41,857   Found link https://files.pythonhosted.org/packages/8f/46/07527d1d65dcad2f18876682b403ee40b8712a876894770519091819a94b/SigProfilerMatrixGenerator-0.1.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.16
2023-12-01T21:51:41,857   Found link https://files.pythonhosted.org/packages/0a/6f/fb786541b30b112da6f35604558b88f29adfd37b322e1bb477ead17ee013/SigProfilerMatrixGenerator-0.1.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.17
2023-12-01T21:51:41,858   Found link https://files.pythonhosted.org/packages/4c/be/499843893df4d02c0bdb5792039b9f550b358513fab7e252dc758fe461ab/SigProfilerMatrixGenerator-0.1.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.18
2023-12-01T21:51:41,859   Found link https://files.pythonhosted.org/packages/ce/31/b2b1bcda58e24b3a8c725477a0e1a6f41b0e9285741103f5deeb69bd0d04/SigProfilerMatrixGenerator-0.1.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.19
2023-12-01T21:51:41,859   Found link https://files.pythonhosted.org/packages/e1/21/fd9805121c089baa2223948e25ec2af1e8fdcde7544e433869740f1c0538/SigProfilerMatrixGenerator-0.1.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.20
2023-12-01T21:51:41,860   Found link https://files.pythonhosted.org/packages/9a/50/979cb4ca33ddd93a69ea767d17e17456f37f4466a7ba8f282ee55168c790/SigProfilerMatrixGenerator-0.1.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.21
2023-12-01T21:51:41,861   Found link https://files.pythonhosted.org/packages/e7/4b/f33f7d0898286be90c3db156863fafcde4e5e8f2ca4aef92e7c6f7424980/SigProfilerMatrixGenerator-0.1.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.22
2023-12-01T21:51:41,861   Found link https://files.pythonhosted.org/packages/c0/19/bfb595b2593be0eb945d196e1689714aade50c5ec43e96a351419579e18d/SigProfilerMatrixGenerator-0.1.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.23
2023-12-01T21:51:41,862   Found link https://files.pythonhosted.org/packages/e8/1c/7efb25df28e11476adad1e8cea8a2d8462d183175c7d4be29415fed872f3/SigProfilerMatrixGenerator-0.1.25.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.25
2023-12-01T21:51:41,863   Found link https://files.pythonhosted.org/packages/48/ca/6df1d33d4c0325190b09c0b2ff257cd46a97fe2b7136115a4ff5b1bcbb6d/SigProfilerMatrixGenerator-1.0.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.0
2023-12-01T21:51:41,864   Found link https://files.pythonhosted.org/packages/ae/1f/730357fb22484d14eb0cfe72e81962c2cfedf90cca75d94c6e1f88afb7b5/SigProfilerMatrixGenerator-1.0.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.1
2023-12-01T21:51:41,864   Found link https://files.pythonhosted.org/packages/8a/e3/1fc8743ee3078227377531039541b21553ab56fdc9914089aecaad18b218/SigProfilerMatrixGenerator-1.0.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.2
2023-12-01T21:51:41,865   Found link https://files.pythonhosted.org/packages/b3/89/6c10ccc120647b2b8a3ff3be7e12c8f0a7d3bbb648728a30e50a641fc5a2/SigProfilerMatrixGenerator-1.0.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.4
2023-12-01T21:51:41,866   Found link https://files.pythonhosted.org/packages/16/56/3e1fe788f9089baf807f1181061d68c19b0a3b4aa27cadedf86ffada0d6c/SigProfilerMatrixGenerator-1.0.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.5
2023-12-01T21:51:41,867   Found link https://files.pythonhosted.org/packages/31/23/bc67851b0fa5539bdb1528045700da2410ebbd4f771e493f7b5f17155365/SigProfilerMatrixGenerator-1.0.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.6
2023-12-01T21:51:41,868   Found link https://files.pythonhosted.org/packages/37/5e/7930da2d209c5944aae45447a8729c85958682f91ab8c5d2bca18ffcfab8/SigProfilerMatrixGenerator-1.0.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.7
2023-12-01T21:51:41,868   Found link https://files.pythonhosted.org/packages/12/c2/a1f85e85501667941a77de4751cd124173bb7dd6b37e5603d6818fbfa9ba/SigProfilerMatrixGenerator-1.0.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.8
2023-12-01T21:51:41,869   Found link https://files.pythonhosted.org/packages/68/8c/7923d4db4e08bbb467d66495f821f17ab2bed7e25b005b7fc153e2d08540/SigProfilerMatrixGenerator-1.0.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.9
2023-12-01T21:51:41,870   Found link https://files.pythonhosted.org/packages/57/3b/92569f53b63e6556dd46fcc514202e865878d7cb3b73f9481730d683f41c/SigProfilerMatrixGenerator-1.0.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.10
2023-12-01T21:51:41,870   Found link https://files.pythonhosted.org/packages/f7/4e/0d43742effcd43be3c8d865026b32017fa1407a6148bc0011dc4a8683509/SigProfilerMatrixGenerator-1.0.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.11
2023-12-01T21:51:41,871   Found link https://files.pythonhosted.org/packages/21/2e/5b81999306f02c711b74ce4c88a3725efb6502ce87b031a95e7f432715d2/SigProfilerMatrixGenerator-1.0.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.12
2023-12-01T21:51:41,872   Found link https://files.pythonhosted.org/packages/a6/ca/ec6bb5899fb7f42110102afa2636d04710b917e755b6b80fdef21e80c090/SigProfilerMatrixGenerator-1.0.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.13
2023-12-01T21:51:41,872   Found link https://files.pythonhosted.org/packages/aa/5f/9eb3e025425af0a8b4ab4dbd629158b53bdf092ec3ba73d87f5bb5af643a/SigProfilerMatrixGenerator-1.0.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.14
2023-12-01T21:51:41,873   Found link https://files.pythonhosted.org/packages/31/e8/5aacb489a0ad39cf892cbc7b91be93ee873e009a28c2ca0fda6ff210f1c2/SigProfilerMatrixGenerator-1.0.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.15
2023-12-01T21:51:41,874   Found link https://files.pythonhosted.org/packages/30/5a/62a7b4224b255e639b0177e9ddc719dce52ca0db701382e9c02a3267c1b3/SigProfilerMatrixGenerator-1.0.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.16
2023-12-01T21:51:41,875   Found link https://files.pythonhosted.org/packages/25/df/a04f48053469efffed5a2574bfdfd11f2fd6f6250596aebb9207fe5ddbd1/SigProfilerMatrixGenerator-1.0.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.17
2023-12-01T21:51:41,875   Found link https://files.pythonhosted.org/packages/e4/81/6e8a9f2c9b4454d8b7df1a2f889d9bfa20786f368469a0082859f9a226e9/SigProfilerMatrixGenerator-1.0.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.18
2023-12-01T21:51:41,876   Found link https://files.pythonhosted.org/packages/8c/07/d6e05005a349db7a2c6e33a03926a0dad081882cbd82781095070e5e6dd2/SigProfilerMatrixGenerator-1.0.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.19
2023-12-01T21:51:41,877   Found link https://files.pythonhosted.org/packages/e7/20/e149f3195446422925cf948bcc7e5aa8ccd6a89cd673d72aa481b7187e85/SigProfilerMatrixGenerator-1.0.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.20
2023-12-01T21:51:41,878   Found link https://files.pythonhosted.org/packages/dc/3f/3a10507445e03d04dcb132d4cf450a510f14076bb9b17284744cd9647cc6/SigProfilerMatrixGenerator-1.0.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.21
2023-12-01T21:51:41,879   Found link https://files.pythonhosted.org/packages/96/3f/4486e817c70d7d37084e168c33a8c77159c0cb5c931ab2afea1e771d94ed/SigProfilerMatrixGenerator-1.0.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.22
2023-12-01T21:51:41,879   Found link https://files.pythonhosted.org/packages/70/d6/0fb646f64373ff597bfc61020312d9f7ec781718043e5ab9e73348aaa77b/SigProfilerMatrixGenerator-1.0.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.23
2023-12-01T21:51:41,880   Found link https://files.pythonhosted.org/packages/cd/df/b2510bad2f657d52cfb18cab3de62b0de6fb7e7cab29bf7fb495eb97c731/SigProfilerMatrixGenerator-1.0.24.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.24
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2023-12-01T21:51:41,882   Found link https://files.pythonhosted.org/packages/fe/ea/0c801757b97f261a9e4e1a4853a5b8debfff9570b28658ab842966a50e0f/SigProfilerMatrixGenerator-1.1.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.0
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2023-12-01T21:51:41,884   Found link https://files.pythonhosted.org/packages/f3/66/47c778b0e3eb8e486a92ef9449a94c7ca1ed43ff376c848f943dfde7c596/SigProfilerMatrixGenerator-1.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.2
2023-12-01T21:51:41,884   Found link https://files.pythonhosted.org/packages/d2/b1/9a5769d42d5d513cebb7bce116a823957ee2a49c32e068634c0294cca07c/SigProfilerMatrixGenerator-1.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.3
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2023-12-01T21:51:41,887   Found link https://files.pythonhosted.org/packages/f2/6f/3c38ca097d04587ea2807d6002783f4b5740cadfbb807d23c80b909aff13/SigProfilerMatrixGenerator-1.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.7
2023-12-01T21:51:41,888   Found link https://files.pythonhosted.org/packages/bd/48/84e1963975ceab1231f2913efcc3f7cb8cb48fd162e97c70fc1289c3132c/SigProfilerMatrixGenerator-1.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.8
2023-12-01T21:51:41,889   Found link https://files.pythonhosted.org/packages/23/0d/834403077582d0634f8134dc0356ec1a29901c22fb864cd0c541b1c231ef/SigProfilerMatrixGenerator-1.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.9
2023-12-01T21:51:41,890   Found link https://files.pythonhosted.org/packages/20/d7/3cc96e6bb315ec5dd52b2063a13d279276df7fe44475388c1c48c156c53c/SigProfilerMatrixGenerator-1.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.10
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2023-12-01T21:51:41,892   Found link https://files.pythonhosted.org/packages/3a/1f/2af2e39b20153ff125e5a5eea041411141ee78935f3e6053be62c33df6e2/SigProfilerMatrixGenerator-1.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.12
2023-12-01T21:51:41,892   Found link https://files.pythonhosted.org/packages/31/09/67b586235317fb7f025b3958092e21cd4ac78a3e4868099147e5bbecb10d/SigProfilerMatrixGenerator-1.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.13
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2023-12-01T21:51:42,201   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.1.2-py3-none-any.whl#sha256=753ad1665aa085731c302c3f47faf8d271f09411eed19ac2b72bfdf3b75846ba (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,201   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.1.1-py3-none-any.whl#sha256=27e38260e760a4ccd9ec5a4a14311edb9907c6c0ca7d5d1d78f656429aaacdc1 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
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2023-12-01T21:51:42,203   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.25-py3-none-any.whl#sha256=88b121438a8f70d63c61c47f2f91e02545357f484e00a1cba40f2cd6ea38a8bc (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,204   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.24-py3-none-any.whl#sha256=3000665e0c0720b3a7b2c0309eafa7f4556b3e062299e8bdbfe7341668b6d70e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,205   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.23-py3-none-any.whl#sha256=346f0ed6e30ddd7f3a43cac30fbe5bbfa60745892f7d1596cb7c07b194eb8e92 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,205   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.22-py3-none-any.whl#sha256=f65b4f92ee8ce2d91a348bbc2d1f293937e478375ceece1357be12a8e59e438e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,206   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.21-py3-none-any.whl#sha256=ca194f9ce8f5287c209c5fd4a172613a722bd580ae65fb109e537fb7317dbfe2 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,206   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.20-py3-none-any.whl#sha256=e45cdce942846442ef835178806bdc652c93eb07e13a010733c00457017bef07 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,207   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.19-py3-none-any.whl#sha256=32865c87cd5fa391e665568c5754f522e05f643cdd5228954a5287f26c9c0b15 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,207   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.18-py3-none-any.whl#sha256=dbe39ab73329e1c99c83d6b06ca09a37afffce26afafbb7a2e4f6b80aaa3e12a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,208   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.17-py3-none-any.whl#sha256=f00663c13dfb4cdfbfaa66d540530d1d72faa74fa8ce9cd3b393177cce259076 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,209   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.16-py3-none-any.whl#sha256=100c192b85a4e452febaa92098ec7bef89ce1a3dd07ac6d2a4c134b7abaa199e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,209   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.15-py3-none-any.whl#sha256=f52a1e1dff6e282bc5a49b52613972622ac649ca0f2800d4fb4f3ca3b17c9b43 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,210   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.14-py3-none-any.whl#sha256=f93bfaf027250a40f5a13dc4b8e16a997ae6788742493fb3594af6e47f991151 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,211   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.13-py3-none-any.whl#sha256=d3633ceb49c32520f1104c9d948af99649eeb295cfc296334b46236ed61a1c83 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,212   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.12-py3-none-any.whl#sha256=de60346baba774d0687b53278c151d8506a9c77db5f83e20eee115803e1f937e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,212   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.11-py3-none-any.whl#sha256=dd800d847b46dc7f093b2cb80ab94344efa485a6efbb1499e38646108224609d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,213   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.10-py3-none-any.whl#sha256=a3374a0ea0f6391e76c2e4a58b19119849e36144e19cbc002ec70909498af992 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,213   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.9-py3-none-any.whl#sha256=6c7633fe9f5a8417bb5091afedd4a769a30b0ab8c614bf4e43e5659197be7f71 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,214   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.8-py3-none-any.whl#sha256=34619b2d119f6b4160f4e496b32a32c2d8f5f716775b86e4c7e9a2e16fdd2704 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,215   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.7-py3-none-any.whl#sha256=9575c5efe37c7891307d98179dec459f848ab2cde8e446cea8077fcea0f18d28 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,215   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.6-py3-none-any.whl#sha256=aa2a6619dd8816d9fe3ab3421d36caea6a1d865c07b08d0eae9a54eecdc010ef (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,216   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.5-py3-none-any.whl#sha256=d53df484d93081841405692aedb1277008c99e6a0af033b5896388d83a2bdc99 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,217   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.4-py3-none-any.whl#sha256=49b4a6b02e75d81349a7c8cf0d2d544f5af30683f0a7d0de47951e17949f75c1 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,217   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.2-py3-none-any.whl#sha256=4a7bbdd72953c5b88432e51350eca29bf6aa02ba42ddfd25bce39aeb009e72ae (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,218   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.1-py3-none-any.whl#sha256=f3241561fcec6a5c0de8bfbff9666644aa97858abd6918f630b02cd0dc693be0 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,219   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.0-py3-none-any.whl#sha256=2baf8d7d7a986468236e54641751b8723ffb12c56ea21e1287a57ffded55eff2 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,220   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.25-py3-none-any.whl#sha256=aee497b7fad4bd30bfa688d613151b9673c70e2cf4b2904e9ba683b17712c980 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,220   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.23-py3-none-any.whl#sha256=dfa173d162a53137e68829a92518c083c9487cbe835d94364dec2ae7348e59c8 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,221   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.22-py3-none-any.whl#sha256=33b7f2f608e3bec7f43b5d3e971d8eab51c19febef85689b827ee22e0acfe80e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,221   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.21-py3-none-any.whl#sha256=9499c45cc55c74f2611b656cb8c826618e6c5dbf866d411f490f04d0f9426ad6 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,222   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.20-py3-none-any.whl#sha256=66a22a8ae93c7fb4e9baad202887e052740893fe0a61880b9f1ec95a09d1c0a0 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,222   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.19-py3-none-any.whl#sha256=365cdf3ead6ecb7d2cf9490b1fed6d629726f24d561d7630b30941cb1a29f348 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,223   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.18-py3-none-any.whl#sha256=449947ad34781b25cae1349dcd4b6d4549946ba009835356645bf7595b5c111a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,224   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.17-py3-none-any.whl#sha256=ae0861d72d43dec0054d6516d9076cb80508514b36f46150767ab5341333d148 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,225   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.16-py3-none-any.whl#sha256=1001d7d6c2fa91680ec31c47ce6a079da2a667accc48484e0a7da3d77aac8740 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,225   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.15-py3-none-any.whl#sha256=288504536508f749d994d31930658f022b5401332bc810ded63b3cd0a49cef3e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,226   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.14-py3-none-any.whl#sha256=35fcddd4e462deee7959573e5e45dfa75d3f2b4ffce81939750a96eedac0b49d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,227   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.13-py3-none-any.whl#sha256=fbb27c504c29ed32596c118b00da8aa59f67854e86799b0b330f8a9f2470037a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,228   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.12-py3-none-any.whl#sha256=24992b19ac04769baed3433c1b795f09597f608117d9e33c67bf40e474e99e84 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,228   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.11-py3-none-any.whl#sha256=c3b1761ab13a6dfb85050409e587eff691595bbf3b22248d8e45024792d0873d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,229   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.10-py3-none-any.whl#sha256=ee4542b0f7f955e9ed1a2377647dcdfe279cb2f4abb1c9f82f65331a696466e6 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,229   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.9-py3-none-any.whl#sha256=15e07c22774c555e633b3c7365931ec869749f9e93699b316ad8b88b90e98661 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,230   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.8-py3-none-any.whl#sha256=f8f015f2654820e23e139b06dad20b2b070c591cf3804c89728031fd465a1761 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,230   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.7-py3-none-any.whl#sha256=2b7197f9e7546455ecec51a3668c35746722be54000330897cdb3bab16b2846c (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,231   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.6-py3-none-any.whl#sha256=9bb77768a94a36b84528c72712dcbab7060347122efa53e72efa67f7db5a4c1d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,232   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.5-py3-none-any.whl#sha256=3bf26507e0f667a2958c8b58caa1307bf15b8dc11912252798fc227e99e98a0b (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,232   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.4-py3-none-any.whl#sha256=68f6f2f696d2ada3a780a59862675d42663d7c9e2e10563337ec01ab3e357dff (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,233   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.3-py3-none-any.whl#sha256=2c8f7184b84f55dd295a9ccbe96ba73b3f8746271bfd3844e25b8204b8df2044 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,234   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.2-py3-none-any.whl#sha256=a77ce882dc149901406d631720a444648a7acde033b8599373cd1cf50ea132b5 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,235   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.1-py3-none-any.whl#sha256=e2a5663dc832700fdb64b22350ca8b0d792920cd1a1ec3cbec1f670ebd911a30 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2023-12-01T21:51:42,235 Skipping link: not a file: https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2023-12-01T21:51:42,236 Skipping link: not a file: https://pypi.org/simple/sigprofilermatrixgenerator/
2023-12-01T21:51:42,268 Given no hashes to check 1 links for project 'sigprofilermatrixgenerator': discarding no candidates
2023-12-01T21:51:42,288 Collecting sigprofilermatrixgenerator==1.2.20
2023-12-01T21:51:42,291   Created temporary directory: /tmp/pip-unpack-lfb2kimb
2023-12-01T21:51:42,516   Downloading SigProfilerMatrixGenerator-1.2.20.tar.gz (39.2 MB)
2023-12-01T21:51:56,102   Added sigprofilermatrixgenerator==1.2.20 from https://files.pythonhosted.org/packages/0a/fb/ca080b8c78c970bde3282e068402fa427bad7ccac21e9d5a75809b82478a/SigProfilerMatrixGenerator-1.2.20.tar.gz to build tracker '/tmp/pip-build-tracker-f_05bl23'
2023-12-01T21:51:56,104   Running setup.py (path:/tmp/pip-wheel-1hl9hmmm/sigprofilermatrixgenerator_b7c718b5e7ae473381d35f9be92793a9/setup.py) egg_info for package sigprofilermatrixgenerator
2023-12-01T21:51:56,105   Created temporary directory: /tmp/pip-pip-egg-info-y37nx9bp
2023-12-01T21:51:56,106   Preparing metadata (setup.py): started
2023-12-01T21:51:56,108   Running command python setup.py egg_info
2023-12-01T21:51:57,192   running egg_info
2023-12-01T21:51:57,194   creating /tmp/pip-pip-egg-info-y37nx9bp/SigProfilerMatrixGenerator.egg-info
2023-12-01T21:51:57,221   writing /tmp/pip-pip-egg-info-y37nx9bp/SigProfilerMatrixGenerator.egg-info/PKG-INFO
2023-12-01T21:51:57,228   writing dependency_links to /tmp/pip-pip-egg-info-y37nx9bp/SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2023-12-01T21:51:57,230   writing entry points to /tmp/pip-pip-egg-info-y37nx9bp/SigProfilerMatrixGenerator.egg-info/entry_points.txt
2023-12-01T21:51:57,232   writing requirements to /tmp/pip-pip-egg-info-y37nx9bp/SigProfilerMatrixGenerator.egg-info/requires.txt
2023-12-01T21:51:57,234   writing top-level names to /tmp/pip-pip-egg-info-y37nx9bp/SigProfilerMatrixGenerator.egg-info/top_level.txt
2023-12-01T21:51:57,236   writing manifest file '/tmp/pip-pip-egg-info-y37nx9bp/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2023-12-01T21:51:57,321   reading manifest file '/tmp/pip-pip-egg-info-y37nx9bp/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2023-12-01T21:51:57,323   reading manifest template 'MANIFEST.in'
2023-12-01T21:51:57,375   warning: no files found matching 'SigProfilerMatrixGenerator/references/vcf_files/*_bench/input/*.vcf'
2023-12-01T21:51:57,665   adding license file 'LICENSE'
2023-12-01T21:51:57,693   writing manifest file '/tmp/pip-pip-egg-info-y37nx9bp/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2023-12-01T21:51:57,805   Preparing metadata (setup.py): finished with status 'done'
2023-12-01T21:51:57,810   Source in /tmp/pip-wheel-1hl9hmmm/sigprofilermatrixgenerator_b7c718b5e7ae473381d35f9be92793a9 has version 1.2.20, which satisfies requirement sigprofilermatrixgenerator==1.2.20 from https://files.pythonhosted.org/packages/0a/fb/ca080b8c78c970bde3282e068402fa427bad7ccac21e9d5a75809b82478a/SigProfilerMatrixGenerator-1.2.20.tar.gz
2023-12-01T21:51:57,811   Removed sigprofilermatrixgenerator==1.2.20 from https://files.pythonhosted.org/packages/0a/fb/ca080b8c78c970bde3282e068402fa427bad7ccac21e9d5a75809b82478a/SigProfilerMatrixGenerator-1.2.20.tar.gz from build tracker '/tmp/pip-build-tracker-f_05bl23'
2023-12-01T21:51:57,818 Created temporary directory: /tmp/pip-unpack-wd8tbcy8
2023-12-01T21:51:57,819 Created temporary directory: /tmp/pip-unpack-__k00meq
2023-12-01T21:51:57,833 Building wheels for collected packages: sigprofilermatrixgenerator
2023-12-01T21:51:57,838   Created temporary directory: /tmp/pip-wheel-xvlnf88x
2023-12-01T21:51:57,839   Building wheel for sigprofilermatrixgenerator (setup.py): started
2023-12-01T21:51:57,840   Destination directory: /tmp/pip-wheel-xvlnf88x
2023-12-01T21:51:57,840   Running command python setup.py bdist_wheel
2023-12-01T21:51:58,895   running bdist_wheel
2023-12-01T21:51:58,997   running build
2023-12-01T21:51:58,998   running build_py
2023-12-01T21:51:59,027   creating build
2023-12-01T21:51:59,027   creating build/lib
2023-12-01T21:51:59,028   creating build/lib/SigProfilerMatrixGenerator
2023-12-01T21:51:59,030   copying SigProfilerMatrixGenerator/test_helpers.py -> build/lib/SigProfilerMatrixGenerator
2023-12-01T21:51:59,032   copying SigProfilerMatrixGenerator/__init__.py -> build/lib/SigProfilerMatrixGenerator
2023-12-01T21:51:59,034   copying SigProfilerMatrixGenerator/version.py -> build/lib/SigProfilerMatrixGenerator
2023-12-01T21:51:59,036   copying SigProfilerMatrixGenerator/install.py -> build/lib/SigProfilerMatrixGenerator
2023-12-01T21:51:59,039   running egg_info
2023-12-01T21:51:59,099   writing SigProfilerMatrixGenerator.egg-info/PKG-INFO
2023-12-01T21:51:59,104   writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2023-12-01T21:51:59,105   writing entry points to SigProfilerMatrixGenerator.egg-info/entry_points.txt
2023-12-01T21:51:59,107   writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt
2023-12-01T21:51:59,109   writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt
2023-12-01T21:51:59,138   reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2023-12-01T21:51:59,160   reading manifest template 'MANIFEST.in'
2023-12-01T21:51:59,209   warning: no files found matching 'SigProfilerMatrixGenerator/references/vcf_files/*_bench/input/*.vcf'
2023-12-01T21:51:59,487   adding license file 'LICENSE'
2023-12-01T21:51:59,528   writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2023-12-01T21:51:59,533   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.controllers' is absent from the `packages` configuration.
2023-12-01T21:51:59,534   !!

2023-12-01T21:51:59,535           ********************************************************************************
2023-12-01T21:51:59,535           ############################
2023-12-01T21:51:59,536           # Package would be ignored #
2023-12-01T21:51:59,537           ############################
2023-12-01T21:51:59,537           Python recognizes 'SigProfilerMatrixGenerator.controllers' as an importable package[^1],
2023-12-01T21:51:59,538           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,539           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,540           package, please make sure that 'SigProfilerMatrixGenerator.controllers' is explicitly added
2023-12-01T21:51:59,540           to the `packages` configuration field.

2023-12-01T21:51:59,542           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,542           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,543           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,544           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,546           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,547           If you don't want 'SigProfilerMatrixGenerator.controllers' to be distributed and are
2023-12-01T21:51:59,548           already explicitly excluding 'SigProfilerMatrixGenerator.controllers' via
2023-12-01T21:51:59,549           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,549           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,550           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,551           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,552           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,553           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,553                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,554                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,554                 directory, all directories are treated like packages.
2023-12-01T21:51:59,555           ********************************************************************************

2023-12-01T21:51:59,557   !!
2023-12-01T21:51:59,558     check.warn(importable)
2023-12-01T21:51:59,558   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV' is absent from the `packages` configuration.
2023-12-01T21:51:59,559   !!

2023-12-01T21:51:59,560           ********************************************************************************
2023-12-01T21:51:59,560           ############################
2023-12-01T21:51:59,561           # Package would be ignored #
2023-12-01T21:51:59,561           ############################
2023-12-01T21:51:59,562           Python recognizes 'SigProfilerMatrixGenerator.references.CNV' as an importable package[^1],
2023-12-01T21:51:59,562           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,564           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,564           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV' is explicitly added
2023-12-01T21:51:59,565           to the `packages` configuration field.

2023-12-01T21:51:59,566           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,567           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,568           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,569           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,571           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,572           If you don't want 'SigProfilerMatrixGenerator.references.CNV' to be distributed and are
2023-12-01T21:51:59,573           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV' via
2023-12-01T21:51:59,573           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,574           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,574           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,576           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,577           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,578           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,579                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,580                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,580                 directory, all directories are treated like packages.
2023-12-01T21:51:59,581           ********************************************************************************

2023-12-01T21:51:59,583   !!
2023-12-01T21:51:59,583     check.warn(importable)
2023-12-01T21:51:59,583   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_input' is absent from the `packages` configuration.
2023-12-01T21:51:59,584   !!

2023-12-01T21:51:59,585           ********************************************************************************
2023-12-01T21:51:59,585           ############################
2023-12-01T21:51:59,585           # Package would be ignored #
2023-12-01T21:51:59,586           ############################
2023-12-01T21:51:59,586           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_input' as an importable package[^1],
2023-12-01T21:51:59,586           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,587           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,588           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_input' is explicitly added
2023-12-01T21:51:59,588           to the `packages` configuration field.

2023-12-01T21:51:59,589           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,589           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,589           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,590           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,591           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,592           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_input' to be distributed and are
2023-12-01T21:51:59,592           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_input' via
2023-12-01T21:51:59,593           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,593           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,594           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,595           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,596           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,597           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,598                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,599                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,599                 directory, all directories are treated like packages.
2023-12-01T21:51:59,600           ********************************************************************************

2023-12-01T21:51:59,601   !!
2023-12-01T21:51:59,601     check.warn(importable)
2023-12-01T21:51:59,602   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_output' is absent from the `packages` configuration.
2023-12-01T21:51:59,602   !!

2023-12-01T21:51:59,603           ********************************************************************************
2023-12-01T21:51:59,604           ############################
2023-12-01T21:51:59,604           # Package would be ignored #
2023-12-01T21:51:59,605           ############################
2023-12-01T21:51:59,605           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_output' as an importable package[^1],
2023-12-01T21:51:59,606           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,607           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,608           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_output' is explicitly added
2023-12-01T21:51:59,608           to the `packages` configuration field.

2023-12-01T21:51:59,610           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,610           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,610           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,611           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,612           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,613           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_output' to be distributed and are
2023-12-01T21:51:59,613           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_output' via
2023-12-01T21:51:59,613           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,614           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,614           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,615           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,616           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,617           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,617                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,618                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,618                 directory, all directories are treated like packages.
2023-12-01T21:51:59,619           ********************************************************************************

2023-12-01T21:51:59,620   !!
2023-12-01T21:51:59,621     check.warn(importable)
2023-12-01T21:51:59,621   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input' is absent from the `packages` configuration.
2023-12-01T21:51:59,622   !!

2023-12-01T21:51:59,623           ********************************************************************************
2023-12-01T21:51:59,624           ############################
2023-12-01T21:51:59,624           # Package would be ignored #
2023-12-01T21:51:59,625           ############################
2023-12-01T21:51:59,625           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input' as an importable package[^1],
2023-12-01T21:51:59,626           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,627           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,627           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input' is explicitly added
2023-12-01T21:51:59,628           to the `packages` configuration field.

2023-12-01T21:51:59,629           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,629           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,630           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,631           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,632           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,633           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input' to be distributed and are
2023-12-01T21:51:59,634           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input' via
2023-12-01T21:51:59,634           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,639           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,640           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,642           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,642           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,644           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,644                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,645                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,645                 directory, all directories are treated like packages.
2023-12-01T21:51:59,646           ********************************************************************************

2023-12-01T21:51:59,646   !!
2023-12-01T21:51:59,647     check.warn(importable)
2023-12-01T21:51:59,647   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is absent from the `packages` configuration.
2023-12-01T21:51:59,648   !!

2023-12-01T21:51:59,648           ********************************************************************************
2023-12-01T21:51:59,649           ############################
2023-12-01T21:51:59,649           # Package would be ignored #
2023-12-01T21:51:59,650           ############################
2023-12-01T21:51:59,650           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' as an importable package[^1],
2023-12-01T21:51:59,651           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,652           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,652           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is explicitly added
2023-12-01T21:51:59,653           to the `packages` configuration field.

2023-12-01T21:51:59,654           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,655           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,655           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,656           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,658           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,659           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' to be distributed and are
2023-12-01T21:51:59,659           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' via
2023-12-01T21:51:59,660           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,660           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,661           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,662           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,663           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,664           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,665                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,666                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,666                 directory, all directories are treated like packages.
2023-12-01T21:51:59,667           ********************************************************************************

2023-12-01T21:51:59,668   !!
2023-12-01T21:51:59,668     check.warn(importable)
2023-12-01T21:51:59,669   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_output' is absent from the `packages` configuration.
2023-12-01T21:51:59,670   !!

2023-12-01T21:51:59,671           ********************************************************************************
2023-12-01T21:51:59,671           ############################
2023-12-01T21:51:59,672           # Package would be ignored #
2023-12-01T21:51:59,672           ############################
2023-12-01T21:51:59,673           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_output' as an importable package[^1],
2023-12-01T21:51:59,673           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,674           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,674           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_output' is explicitly added
2023-12-01T21:51:59,675           to the `packages` configuration field.

2023-12-01T21:51:59,675           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,676           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,676           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,677           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,678           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,679           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_output' to be distributed and are
2023-12-01T21:51:59,679           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_output' via
2023-12-01T21:51:59,680           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,680           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,681           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,682           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,683           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,684           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,684                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,685                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,685                 directory, all directories are treated like packages.
2023-12-01T21:51:59,686           ********************************************************************************

2023-12-01T21:51:59,687   !!
2023-12-01T21:51:59,687     check.warn(importable)
2023-12-01T21:51:59,688   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is absent from the `packages` configuration.
2023-12-01T21:51:59,688   !!

2023-12-01T21:51:59,689           ********************************************************************************
2023-12-01T21:51:59,690           ############################
2023-12-01T21:51:59,690           # Package would be ignored #
2023-12-01T21:51:59,691           ############################
2023-12-01T21:51:59,691           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' as an importable package[^1],
2023-12-01T21:51:59,692           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,693           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,693           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is explicitly added
2023-12-01T21:51:59,694           to the `packages` configuration field.

2023-12-01T21:51:59,695           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,696           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,696           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,697           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,697           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,698           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' to be distributed and are
2023-12-01T21:51:59,699           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' via
2023-12-01T21:51:59,699           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,699           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,700           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,701           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,701           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,703           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,703                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,703                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,704                 directory, all directories are treated like packages.
2023-12-01T21:51:59,704           ********************************************************************************

2023-12-01T21:51:59,705   !!
2023-12-01T21:51:59,706     check.warn(importable)
2023-12-01T21:51:59,706   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome' is absent from the `packages` configuration.
2023-12-01T21:51:59,707   !!

2023-12-01T21:51:59,708           ********************************************************************************
2023-12-01T21:51:59,709           ############################
2023-12-01T21:51:59,709           # Package would be ignored #
2023-12-01T21:51:59,710           ############################
2023-12-01T21:51:59,710           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome' as an importable package[^1],
2023-12-01T21:51:59,711           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,712           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,713           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome' is explicitly added
2023-12-01T21:51:59,714           to the `packages` configuration field.

2023-12-01T21:51:59,715           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,715           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,716           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,717           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,718           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,719           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome' to be distributed and are
2023-12-01T21:51:59,720           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome' via
2023-12-01T21:51:59,721           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,721           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,722           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,723           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,724           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,725           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,726                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,726                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,726                 directory, all directories are treated like packages.
2023-12-01T21:51:59,727           ********************************************************************************

2023-12-01T21:51:59,728   !!
2023-12-01T21:51:59,728     check.warn(importable)
2023-12-01T21:51:59,729   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is absent from the `packages` configuration.
2023-12-01T21:51:59,729   !!

2023-12-01T21:51:59,730           ********************************************************************************
2023-12-01T21:51:59,730           ############################
2023-12-01T21:51:59,731           # Package would be ignored #
2023-12-01T21:51:59,731           ############################
2023-12-01T21:51:59,732           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' as an importable package[^1],
2023-12-01T21:51:59,732           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,733           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,733           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is explicitly added
2023-12-01T21:51:59,734           to the `packages` configuration field.

2023-12-01T21:51:59,735           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,735           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,736           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,736           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,737           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,738           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' to be distributed and are
2023-12-01T21:51:59,739           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' via
2023-12-01T21:51:59,739           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,740           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,741           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,742           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,743           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,744           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,745                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,745                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,746                 directory, all directories are treated like packages.
2023-12-01T21:51:59,746           ********************************************************************************

2023-12-01T21:51:59,748   !!
2023-12-01T21:51:59,748     check.warn(importable)
2023-12-01T21:51:59,749   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is absent from the `packages` configuration.
2023-12-01T21:51:59,749   !!

2023-12-01T21:51:59,751           ********************************************************************************
2023-12-01T21:51:59,751           ############################
2023-12-01T21:51:59,752           # Package would be ignored #
2023-12-01T21:51:59,752           ############################
2023-12-01T21:51:59,752           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' as an importable package[^1],
2023-12-01T21:51:59,753           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,753           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,754           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is explicitly added
2023-12-01T21:51:59,754           to the `packages` configuration field.

2023-12-01T21:51:59,755           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,756           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,756           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,757           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,758           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,759           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' to be distributed and are
2023-12-01T21:51:59,759           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' via
2023-12-01T21:51:59,760           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,760           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,761           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,762           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,763           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,765           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,766                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,766                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,767                 directory, all directories are treated like packages.
2023-12-01T21:51:59,767           ********************************************************************************

2023-12-01T21:51:59,769   !!
2023-12-01T21:51:59,769     check.warn(importable)
2023-12-01T21:51:59,770   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is absent from the `packages` configuration.
2023-12-01T21:51:59,771   !!

2023-12-01T21:51:59,772           ********************************************************************************
2023-12-01T21:51:59,772           ############################
2023-12-01T21:51:59,773           # Package would be ignored #
2023-12-01T21:51:59,773           ############################
2023-12-01T21:51:59,774           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' as an importable package[^1],
2023-12-01T21:51:59,774           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,775           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,776           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is explicitly added
2023-12-01T21:51:59,777           to the `packages` configuration field.

2023-12-01T21:51:59,778           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,778           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,779           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,780           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,781           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,782           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' to be distributed and are
2023-12-01T21:51:59,782           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' via
2023-12-01T21:51:59,782           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,783           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,783           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,784           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,785           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,786           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,786                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,787                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,787                 directory, all directories are treated like packages.
2023-12-01T21:51:59,788           ********************************************************************************

2023-12-01T21:51:59,789   !!
2023-12-01T21:51:59,789     check.warn(importable)
2023-12-01T21:51:59,790   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is absent from the `packages` configuration.
2023-12-01T21:51:59,790   !!

2023-12-01T21:51:59,792           ********************************************************************************
2023-12-01T21:51:59,792           ############################
2023-12-01T21:51:59,793           # Package would be ignored #
2023-12-01T21:51:59,794           ############################
2023-12-01T21:51:59,794           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' as an importable package[^1],
2023-12-01T21:51:59,795           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,796           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,797           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is explicitly added
2023-12-01T21:51:59,798           to the `packages` configuration field.

2023-12-01T21:51:59,799           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,799           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,800           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,801           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,802           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,803           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' to be distributed and are
2023-12-01T21:51:59,804           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' via
2023-12-01T21:51:59,804           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,805           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,805           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,807           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,808           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,809           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,810                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,810                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,811                 directory, all directories are treated like packages.
2023-12-01T21:51:59,811           ********************************************************************************

2023-12-01T21:51:59,812   !!
2023-12-01T21:51:59,812     check.warn(importable)
2023-12-01T21:51:59,813   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is absent from the `packages` configuration.
2023-12-01T21:51:59,813   !!

2023-12-01T21:51:59,814           ********************************************************************************
2023-12-01T21:51:59,814           ############################
2023-12-01T21:51:59,815           # Package would be ignored #
2023-12-01T21:51:59,815           ############################
2023-12-01T21:51:59,816           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' as an importable package[^1],
2023-12-01T21:51:59,816           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,817           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,817           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is explicitly added
2023-12-01T21:51:59,818           to the `packages` configuration field.

2023-12-01T21:51:59,819           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,819           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,820           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,821           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,822           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,823           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' to be distributed and are
2023-12-01T21:51:59,824           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' via
2023-12-01T21:51:59,825           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,825           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,826           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,827           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,828           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,829           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,830                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,830                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,831                 directory, all directories are treated like packages.
2023-12-01T21:51:59,831           ********************************************************************************

2023-12-01T21:51:59,833   !!
2023-12-01T21:51:59,833     check.warn(importable)
2023-12-01T21:51:59,834   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is absent from the `packages` configuration.
2023-12-01T21:51:59,834   !!

2023-12-01T21:51:59,836           ********************************************************************************
2023-12-01T21:51:59,836           ############################
2023-12-01T21:51:59,837           # Package would be ignored #
2023-12-01T21:51:59,837           ############################
2023-12-01T21:51:59,838           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' as an importable package[^1],
2023-12-01T21:51:59,838           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,839           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,840           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is explicitly added
2023-12-01T21:51:59,840           to the `packages` configuration field.

2023-12-01T21:51:59,841           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,841           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,842           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,842           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,843           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,844           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' to be distributed and are
2023-12-01T21:51:59,844           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' via
2023-12-01T21:51:59,845           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,845           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,846           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,847           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,848           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,849           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,850                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,851                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,851                 directory, all directories are treated like packages.
2023-12-01T21:51:59,852           ********************************************************************************

2023-12-01T21:51:59,853   !!
2023-12-01T21:51:59,854     check.warn(importable)
2023-12-01T21:51:59,854   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is absent from the `packages` configuration.
2023-12-01T21:51:59,855   !!

2023-12-01T21:51:59,856           ********************************************************************************
2023-12-01T21:51:59,857           ############################
2023-12-01T21:51:59,857           # Package would be ignored #
2023-12-01T21:51:59,858           ############################
2023-12-01T21:51:59,858           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' as an importable package[^1],
2023-12-01T21:51:59,859           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,860           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,861           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is explicitly added
2023-12-01T21:51:59,861           to the `packages` configuration field.

2023-12-01T21:51:59,863           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,863           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,864           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,865           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,866           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,867           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' to be distributed and are
2023-12-01T21:51:59,867           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' via
2023-12-01T21:51:59,868           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,868           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,869           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,870           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,871           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,872           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,873                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,873                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,874                 directory, all directories are treated like packages.
2023-12-01T21:51:59,875           ********************************************************************************

2023-12-01T21:51:59,876   !!
2023-12-01T21:51:59,876     check.warn(importable)
2023-12-01T21:51:59,877   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is absent from the `packages` configuration.
2023-12-01T21:51:59,877   !!

2023-12-01T21:51:59,878           ********************************************************************************
2023-12-01T21:51:59,879           ############################
2023-12-01T21:51:59,879           # Package would be ignored #
2023-12-01T21:51:59,880           ############################
2023-12-01T21:51:59,880           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' as an importable package[^1],
2023-12-01T21:51:59,881           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,882           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,882           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is explicitly added
2023-12-01T21:51:59,883           to the `packages` configuration field.

2023-12-01T21:51:59,884           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,885           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,885           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,886           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,887           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,888           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' to be distributed and are
2023-12-01T21:51:59,889           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' via
2023-12-01T21:51:59,889           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,890           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,891           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,892           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,893           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,895           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,895                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,896                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,896                 directory, all directories are treated like packages.
2023-12-01T21:51:59,897           ********************************************************************************

2023-12-01T21:51:59,897   !!
2023-12-01T21:51:59,898     check.warn(importable)
2023-12-01T21:51:59,898   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is absent from the `packages` configuration.
2023-12-01T21:51:59,899   !!

2023-12-01T21:51:59,900           ********************************************************************************
2023-12-01T21:51:59,900           ############################
2023-12-01T21:51:59,901           # Package would be ignored #
2023-12-01T21:51:59,901           ############################
2023-12-01T21:51:59,901           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' as an importable package[^1],
2023-12-01T21:51:59,902           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,903           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,903           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is explicitly added
2023-12-01T21:51:59,904           to the `packages` configuration field.

2023-12-01T21:51:59,905           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,905           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,906           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,907           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,908           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,909           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' to be distributed and are
2023-12-01T21:51:59,909           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' via
2023-12-01T21:51:59,910           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,910           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,911           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,912           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,913           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,914           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,915                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,915                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,916                 directory, all directories are treated like packages.
2023-12-01T21:51:59,917           ********************************************************************************

2023-12-01T21:51:59,918   !!
2023-12-01T21:51:59,918     check.warn(importable)
2023-12-01T21:51:59,919   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is absent from the `packages` configuration.
2023-12-01T21:51:59,919   !!

2023-12-01T21:51:59,921           ********************************************************************************
2023-12-01T21:51:59,921           ############################
2023-12-01T21:51:59,922           # Package would be ignored #
2023-12-01T21:51:59,923           ############################
2023-12-01T21:51:59,923           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' as an importable package[^1],
2023-12-01T21:51:59,924           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,925           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,925           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is explicitly added
2023-12-01T21:51:59,925           to the `packages` configuration field.

2023-12-01T21:51:59,926           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,927           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,927           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,928           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,929           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,929           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' to be distributed and are
2023-12-01T21:51:59,930           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' via
2023-12-01T21:51:59,930           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,931           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,931           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,932           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,933           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,934           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,935                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,935                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,936                 directory, all directories are treated like packages.
2023-12-01T21:51:59,936           ********************************************************************************

2023-12-01T21:51:59,938   !!
2023-12-01T21:51:59,938     check.warn(importable)
2023-12-01T21:51:59,939   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is absent from the `packages` configuration.
2023-12-01T21:51:59,939   !!

2023-12-01T21:51:59,940           ********************************************************************************
2023-12-01T21:51:59,941           ############################
2023-12-01T21:51:59,942           # Package would be ignored #
2023-12-01T21:51:59,942           ############################
2023-12-01T21:51:59,943           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' as an importable package[^1],
2023-12-01T21:51:59,943           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,945           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,945           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is explicitly added
2023-12-01T21:51:59,946           to the `packages` configuration field.

2023-12-01T21:51:59,947           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,948           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,949           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,950           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,952           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,952           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' to be distributed and are
2023-12-01T21:51:59,953           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' via
2023-12-01T21:51:59,953           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,954           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,954           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,955           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,956           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,957           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,957                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,958                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,958                 directory, all directories are treated like packages.
2023-12-01T21:51:59,959           ********************************************************************************

2023-12-01T21:51:59,960   !!
2023-12-01T21:51:59,960     check.warn(importable)
2023-12-01T21:51:59,960   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is absent from the `packages` configuration.
2023-12-01T21:51:59,961   !!

2023-12-01T21:51:59,962           ********************************************************************************
2023-12-01T21:51:59,962           ############################
2023-12-01T21:51:59,963           # Package would be ignored #
2023-12-01T21:51:59,963           ############################
2023-12-01T21:51:59,964           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' as an importable package[^1],
2023-12-01T21:51:59,964           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,965           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,966           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is explicitly added
2023-12-01T21:51:59,966           to the `packages` configuration field.

2023-12-01T21:51:59,967           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,968           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,968           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,969           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,970           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,971           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' to be distributed and are
2023-12-01T21:51:59,972           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' via
2023-12-01T21:51:59,972           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,973           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,973           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,975           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,976           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,978           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,978                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,979                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,980                 directory, all directories are treated like packages.
2023-12-01T21:51:59,980           ********************************************************************************

2023-12-01T21:51:59,981   !!
2023-12-01T21:51:59,981     check.warn(importable)
2023-12-01T21:51:59,981   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is absent from the `packages` configuration.
2023-12-01T21:51:59,982   !!

2023-12-01T21:51:59,983           ********************************************************************************
2023-12-01T21:51:59,983           ############################
2023-12-01T21:51:59,984           # Package would be ignored #
2023-12-01T21:51:59,984           ############################
2023-12-01T21:51:59,984           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' as an importable package[^1],
2023-12-01T21:51:59,985           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:51:59,986           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:51:59,986           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is explicitly added
2023-12-01T21:51:59,986           to the `packages` configuration field.

2023-12-01T21:51:59,987           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:51:59,988           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:51:59,988           instead of `find_packages(...)`/`find:`).

2023-12-01T21:51:59,989           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:51:59,990           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:51:59,991           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' to be distributed and are
2023-12-01T21:51:59,991           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' via
2023-12-01T21:51:59,992           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:51:59,993           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:51:59,993           combination with a more fine grained `package-data` configuration.

2023-12-01T21:51:59,994           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:51:59,995           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:51:59,997           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:51:59,997                 even if it does not contain any `.py` files.
2023-12-01T21:51:59,998                 On the other hand, currently there is no concept of package data
2023-12-01T21:51:59,998                 directory, all directories are treated like packages.
2023-12-01T21:51:59,999           ********************************************************************************

2023-12-01T21:52:00,000   !!
2023-12-01T21:52:00,001     check.warn(importable)
2023-12-01T21:52:00,001   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is absent from the `packages` configuration.
2023-12-01T21:52:00,002   !!

2023-12-01T21:52:00,003           ********************************************************************************
2023-12-01T21:52:00,003           ############################
2023-12-01T21:52:00,004           # Package would be ignored #
2023-12-01T21:52:00,005           ############################
2023-12-01T21:52:00,005           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' as an importable package[^1],
2023-12-01T21:52:00,006           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,007           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,007           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is explicitly added
2023-12-01T21:52:00,008           to the `packages` configuration field.

2023-12-01T21:52:00,009           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,009           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,009           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,010           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,011           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,012           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' to be distributed and are
2023-12-01T21:52:00,012           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' via
2023-12-01T21:52:00,013           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,013           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,014           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,015           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,016           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,018           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,019                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,019                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,020                 directory, all directories are treated like packages.
2023-12-01T21:52:00,021           ********************************************************************************

2023-12-01T21:52:00,022   !!
2023-12-01T21:52:00,023     check.warn(importable)
2023-12-01T21:52:00,023   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is absent from the `packages` configuration.
2023-12-01T21:52:00,024   !!

2023-12-01T21:52:00,025           ********************************************************************************
2023-12-01T21:52:00,025           ############################
2023-12-01T21:52:00,026           # Package would be ignored #
2023-12-01T21:52:00,026           ############################
2023-12-01T21:52:00,027           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' as an importable package[^1],
2023-12-01T21:52:00,027           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,028           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,029           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is explicitly added
2023-12-01T21:52:00,029           to the `packages` configuration field.

2023-12-01T21:52:00,030           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,031           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,031           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,033           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,034           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,035           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' to be distributed and are
2023-12-01T21:52:00,035           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' via
2023-12-01T21:52:00,035           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,036           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,036           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,037           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,038           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,039           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,039                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,040                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,040                 directory, all directories are treated like packages.
2023-12-01T21:52:00,041           ********************************************************************************

2023-12-01T21:52:00,042   !!
2023-12-01T21:52:00,042     check.warn(importable)
2023-12-01T21:52:00,042   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is absent from the `packages` configuration.
2023-12-01T21:52:00,043   !!

2023-12-01T21:52:00,044           ********************************************************************************
2023-12-01T21:52:00,044           ############################
2023-12-01T21:52:00,045           # Package would be ignored #
2023-12-01T21:52:00,045           ############################
2023-12-01T21:52:00,046           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' as an importable package[^1],
2023-12-01T21:52:00,046           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,047           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,048           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is explicitly added
2023-12-01T21:52:00,048           to the `packages` configuration field.

2023-12-01T21:52:00,049           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,050           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,050           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,051           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,052           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,054           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' to be distributed and are
2023-12-01T21:52:00,054           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' via
2023-12-01T21:52:00,055           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,055           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,056           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,057           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,058           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,060           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,061                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,062                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,062                 directory, all directories are treated like packages.
2023-12-01T21:52:00,062           ********************************************************************************

2023-12-01T21:52:00,063   !!
2023-12-01T21:52:00,064     check.warn(importable)
2023-12-01T21:52:00,064   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is absent from the `packages` configuration.
2023-12-01T21:52:00,065   !!

2023-12-01T21:52:00,065           ********************************************************************************
2023-12-01T21:52:00,066           ############################
2023-12-01T21:52:00,066           # Package would be ignored #
2023-12-01T21:52:00,067           ############################
2023-12-01T21:52:00,067           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' as an importable package[^1],
2023-12-01T21:52:00,068           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,069           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,069           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is explicitly added
2023-12-01T21:52:00,069           to the `packages` configuration field.

2023-12-01T21:52:00,070           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,071           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,071           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,072           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,073           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,074           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' to be distributed and are
2023-12-01T21:52:00,075           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' via
2023-12-01T21:52:00,076           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,076           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,077           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,078           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,079           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,081           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,081                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,082                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,082                 directory, all directories are treated like packages.
2023-12-01T21:52:00,083           ********************************************************************************

2023-12-01T21:52:00,084   !!
2023-12-01T21:52:00,084     check.warn(importable)
2023-12-01T21:52:00,085   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is absent from the `packages` configuration.
2023-12-01T21:52:00,086   !!

2023-12-01T21:52:00,087           ********************************************************************************
2023-12-01T21:52:00,087           ############################
2023-12-01T21:52:00,088           # Package would be ignored #
2023-12-01T21:52:00,089           ############################
2023-12-01T21:52:00,089           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' as an importable package[^1],
2023-12-01T21:52:00,090           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,091           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,091           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is explicitly added
2023-12-01T21:52:00,092           to the `packages` configuration field.

2023-12-01T21:52:00,093           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,093           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,094           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,095           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,096           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,097           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' to be distributed and are
2023-12-01T21:52:00,097           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' via
2023-12-01T21:52:00,098           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,098           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,099           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,099           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,100           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,102           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,102                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,103                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,104                 directory, all directories are treated like packages.
2023-12-01T21:52:00,104           ********************************************************************************

2023-12-01T21:52:00,106   !!
2023-12-01T21:52:00,106     check.warn(importable)
2023-12-01T21:52:00,106   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is absent from the `packages` configuration.
2023-12-01T21:52:00,107   !!

2023-12-01T21:52:00,108           ********************************************************************************
2023-12-01T21:52:00,109           ############################
2023-12-01T21:52:00,109           # Package would be ignored #
2023-12-01T21:52:00,110           ############################
2023-12-01T21:52:00,110           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' as an importable package[^1],
2023-12-01T21:52:00,111           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,112           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,113           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is explicitly added
2023-12-01T21:52:00,113           to the `packages` configuration field.

2023-12-01T21:52:00,114           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,115           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,116           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,117           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,118           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,119           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' to be distributed and are
2023-12-01T21:52:00,120           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' via
2023-12-01T21:52:00,120           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,121           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,121           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,122           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,123           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,125           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,125                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,125                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,126                 directory, all directories are treated like packages.
2023-12-01T21:52:00,126           ********************************************************************************

2023-12-01T21:52:00,127   !!
2023-12-01T21:52:00,128     check.warn(importable)
2023-12-01T21:52:00,128   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is absent from the `packages` configuration.
2023-12-01T21:52:00,129   !!

2023-12-01T21:52:00,130           ********************************************************************************
2023-12-01T21:52:00,130           ############################
2023-12-01T21:52:00,131           # Package would be ignored #
2023-12-01T21:52:00,131           ############################
2023-12-01T21:52:00,132           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' as an importable package[^1],
2023-12-01T21:52:00,132           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,133           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,134           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is explicitly added
2023-12-01T21:52:00,134           to the `packages` configuration field.

2023-12-01T21:52:00,136           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,136           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,137           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,138           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,139           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,140           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' to be distributed and are
2023-12-01T21:52:00,141           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' via
2023-12-01T21:52:00,142           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,142           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,143           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,144           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,145           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,147           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,148                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,148                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,149                 directory, all directories are treated like packages.
2023-12-01T21:52:00,150           ********************************************************************************

2023-12-01T21:52:00,150   !!
2023-12-01T21:52:00,151     check.warn(importable)
2023-12-01T21:52:00,152   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is absent from the `packages` configuration.
2023-12-01T21:52:00,152   !!

2023-12-01T21:52:00,153           ********************************************************************************
2023-12-01T21:52:00,153           ############################
2023-12-01T21:52:00,154           # Package would be ignored #
2023-12-01T21:52:00,155           ############################
2023-12-01T21:52:00,155           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' as an importable package[^1],
2023-12-01T21:52:00,156           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,157           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,160           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is explicitly added
2023-12-01T21:52:00,163           to the `packages` configuration field.

2023-12-01T21:52:00,172           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,172           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,173           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,174           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,175           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,177           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' to be distributed and are
2023-12-01T21:52:00,177           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' via
2023-12-01T21:52:00,178           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,179           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,179           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,181           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,182           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,184           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,185                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,185                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,186                 directory, all directories are treated like packages.
2023-12-01T21:52:00,187           ********************************************************************************

2023-12-01T21:52:00,188   !!
2023-12-01T21:52:00,189     check.warn(importable)
2023-12-01T21:52:00,189   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is absent from the `packages` configuration.
2023-12-01T21:52:00,190   !!

2023-12-01T21:52:00,191           ********************************************************************************
2023-12-01T21:52:00,192           ############################
2023-12-01T21:52:00,192           # Package would be ignored #
2023-12-01T21:52:00,193           ############################
2023-12-01T21:52:00,194           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' as an importable package[^1],
2023-12-01T21:52:00,194           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,195           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,196           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is explicitly added
2023-12-01T21:52:00,196           to the `packages` configuration field.

2023-12-01T21:52:00,197           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,198           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,198           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,199           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,200           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,202           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' to be distributed and are
2023-12-01T21:52:00,202           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' via
2023-12-01T21:52:00,202           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,203           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,203           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,204           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,206           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,207           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,208                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,208                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,209                 directory, all directories are treated like packages.
2023-12-01T21:52:00,209           ********************************************************************************

2023-12-01T21:52:00,210   !!
2023-12-01T21:52:00,211     check.warn(importable)
2023-12-01T21:52:00,211   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is absent from the `packages` configuration.
2023-12-01T21:52:00,212   !!

2023-12-01T21:52:00,213           ********************************************************************************
2023-12-01T21:52:00,213           ############################
2023-12-01T21:52:00,214           # Package would be ignored #
2023-12-01T21:52:00,215           ############################
2023-12-01T21:52:00,215           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' as an importable package[^1],
2023-12-01T21:52:00,216           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,217           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,217           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is explicitly added
2023-12-01T21:52:00,218           to the `packages` configuration field.

2023-12-01T21:52:00,219           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,220           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,220           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,221           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,222           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,224           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' to be distributed and are
2023-12-01T21:52:00,224           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' via
2023-12-01T21:52:00,225           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,225           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,226           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,227           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,228           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,229           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,230                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,230                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,231                 directory, all directories are treated like packages.
2023-12-01T21:52:00,231           ********************************************************************************

2023-12-01T21:52:00,233   !!
2023-12-01T21:52:00,233     check.warn(importable)
2023-12-01T21:52:00,234   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is absent from the `packages` configuration.
2023-12-01T21:52:00,234   !!

2023-12-01T21:52:00,235           ********************************************************************************
2023-12-01T21:52:00,236           ############################
2023-12-01T21:52:00,236           # Package would be ignored #
2023-12-01T21:52:00,237           ############################
2023-12-01T21:52:00,237           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' as an importable package[^1],
2023-12-01T21:52:00,238           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,239           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,240           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is explicitly added
2023-12-01T21:52:00,240           to the `packages` configuration field.

2023-12-01T21:52:00,241           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,242           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,243           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,244           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,245           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,247           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' to be distributed and are
2023-12-01T21:52:00,247           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' via
2023-12-01T21:52:00,248           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,248           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,249           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,250           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,251           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,253           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,253                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,254                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,255                 directory, all directories are treated like packages.
2023-12-01T21:52:00,255           ********************************************************************************

2023-12-01T21:52:00,256   !!
2023-12-01T21:52:00,257     check.warn(importable)
2023-12-01T21:52:00,257   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is absent from the `packages` configuration.
2023-12-01T21:52:00,258   !!

2023-12-01T21:52:00,258           ********************************************************************************
2023-12-01T21:52:00,259           ############################
2023-12-01T21:52:00,259           # Package would be ignored #
2023-12-01T21:52:00,260           ############################
2023-12-01T21:52:00,260           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' as an importable package[^1],
2023-12-01T21:52:00,261           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,262           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,262           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is explicitly added
2023-12-01T21:52:00,263           to the `packages` configuration field.

2023-12-01T21:52:00,264           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,264           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,265           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,266           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,267           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,268           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' to be distributed and are
2023-12-01T21:52:00,269           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' via
2023-12-01T21:52:00,269           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,270           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,271           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,272           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,273           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,275           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,275                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,276                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,276                 directory, all directories are treated like packages.
2023-12-01T21:52:00,277           ********************************************************************************

2023-12-01T21:52:00,278   !!
2023-12-01T21:52:00,279     check.warn(importable)
2023-12-01T21:52:00,280   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is absent from the `packages` configuration.
2023-12-01T21:52:00,280   !!

2023-12-01T21:52:00,281           ********************************************************************************
2023-12-01T21:52:00,282           ############################
2023-12-01T21:52:00,282           # Package would be ignored #
2023-12-01T21:52:00,283           ############################
2023-12-01T21:52:00,284           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' as an importable package[^1],
2023-12-01T21:52:00,284           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,286           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,286           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is explicitly added
2023-12-01T21:52:00,287           to the `packages` configuration field.

2023-12-01T21:52:00,288           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,288           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,289           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,290           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,291           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,292           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' to be distributed and are
2023-12-01T21:52:00,293           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' via
2023-12-01T21:52:00,293           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,294           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,294           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,295           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,296           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,299           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,299                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,300                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,300                 directory, all directories are treated like packages.
2023-12-01T21:52:00,301           ********************************************************************************

2023-12-01T21:52:00,303   !!
2023-12-01T21:52:00,303     check.warn(importable)
2023-12-01T21:52:00,304   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is absent from the `packages` configuration.
2023-12-01T21:52:00,304   !!

2023-12-01T21:52:00,306           ********************************************************************************
2023-12-01T21:52:00,306           ############################
2023-12-01T21:52:00,307           # Package would be ignored #
2023-12-01T21:52:00,308           ############################
2023-12-01T21:52:00,308           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' as an importable package[^1],
2023-12-01T21:52:00,309           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,310           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,310           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is explicitly added
2023-12-01T21:52:00,311           to the `packages` configuration field.

2023-12-01T21:52:00,312           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,313           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,313           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,314           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,316           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,317           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' to be distributed and are
2023-12-01T21:52:00,318           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' via
2023-12-01T21:52:00,318           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,319           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,319           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,320           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,321           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,323           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,323                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,324                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,324                 directory, all directories are treated like packages.
2023-12-01T21:52:00,325           ********************************************************************************

2023-12-01T21:52:00,326   !!
2023-12-01T21:52:00,327     check.warn(importable)
2023-12-01T21:52:00,327   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is absent from the `packages` configuration.
2023-12-01T21:52:00,328   !!

2023-12-01T21:52:00,329           ********************************************************************************
2023-12-01T21:52:00,329           ############################
2023-12-01T21:52:00,330           # Package would be ignored #
2023-12-01T21:52:00,330           ############################
2023-12-01T21:52:00,331           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' as an importable package[^1],
2023-12-01T21:52:00,331           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,333           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,333           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is explicitly added
2023-12-01T21:52:00,334           to the `packages` configuration field.

2023-12-01T21:52:00,335           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,336           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,336           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,337           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,339           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,340           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' to be distributed and are
2023-12-01T21:52:00,341           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' via
2023-12-01T21:52:00,341           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,342           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,343           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,344           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,345           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,347           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,348                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,348                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,349                 directory, all directories are treated like packages.
2023-12-01T21:52:00,350           ********************************************************************************

2023-12-01T21:52:00,351   !!
2023-12-01T21:52:00,351     check.warn(importable)
2023-12-01T21:52:00,352   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is absent from the `packages` configuration.
2023-12-01T21:52:00,352   !!

2023-12-01T21:52:00,353           ********************************************************************************
2023-12-01T21:52:00,353           ############################
2023-12-01T21:52:00,354           # Package would be ignored #
2023-12-01T21:52:00,354           ############################
2023-12-01T21:52:00,355           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' as an importable package[^1],
2023-12-01T21:52:00,356           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,356           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,357           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is explicitly added
2023-12-01T21:52:00,357           to the `packages` configuration field.

2023-12-01T21:52:00,358           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,359           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,359           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,360           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,361           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,362           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' to be distributed and are
2023-12-01T21:52:00,363           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' via
2023-12-01T21:52:00,364           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,364           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,365           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,366           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,367           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,369           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,370                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,370                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,371                 directory, all directories are treated like packages.
2023-12-01T21:52:00,371           ********************************************************************************

2023-12-01T21:52:00,373   !!
2023-12-01T21:52:00,373     check.warn(importable)
2023-12-01T21:52:00,374   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is absent from the `packages` configuration.
2023-12-01T21:52:00,375   !!

2023-12-01T21:52:00,376           ********************************************************************************
2023-12-01T21:52:00,376           ############################
2023-12-01T21:52:00,377           # Package would be ignored #
2023-12-01T21:52:00,378           ############################
2023-12-01T21:52:00,378           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' as an importable package[^1],
2023-12-01T21:52:00,379           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,380           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,381           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is explicitly added
2023-12-01T21:52:00,381           to the `packages` configuration field.

2023-12-01T21:52:00,382           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,383           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,383           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,384           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,385           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,386           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' to be distributed and are
2023-12-01T21:52:00,387           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' via
2023-12-01T21:52:00,387           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,388           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,388           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,390           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,391           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,392           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,393                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,393                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,394                 directory, all directories are treated like packages.
2023-12-01T21:52:00,394           ********************************************************************************

2023-12-01T21:52:00,396   !!
2023-12-01T21:52:00,396     check.warn(importable)
2023-12-01T21:52:00,397   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is absent from the `packages` configuration.
2023-12-01T21:52:00,397   !!

2023-12-01T21:52:00,399           ********************************************************************************
2023-12-01T21:52:00,399           ############################
2023-12-01T21:52:00,400           # Package would be ignored #
2023-12-01T21:52:00,401           ############################
2023-12-01T21:52:00,402           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' as an importable package[^1],
2023-12-01T21:52:00,402           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,403           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,405           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is explicitly added
2023-12-01T21:52:00,405           to the `packages` configuration field.

2023-12-01T21:52:00,407           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,407           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,408           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,409           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,411           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,412           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' to be distributed and are
2023-12-01T21:52:00,413           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' via
2023-12-01T21:52:00,413           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,414           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,414           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,416           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,417           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,418           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,419                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,419                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,420                 directory, all directories are treated like packages.
2023-12-01T21:52:00,420           ********************************************************************************

2023-12-01T21:52:00,422   !!
2023-12-01T21:52:00,423     check.warn(importable)
2023-12-01T21:52:00,423   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' is absent from the `packages` configuration.
2023-12-01T21:52:00,424   !!

2023-12-01T21:52:00,425           ********************************************************************************
2023-12-01T21:52:00,426           ############################
2023-12-01T21:52:00,426           # Package would be ignored #
2023-12-01T21:52:00,427           ############################
2023-12-01T21:52:00,428           Python recognizes 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' as an importable package[^1],
2023-12-01T21:52:00,428           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,429           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,430           package, please make sure that 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' is explicitly added
2023-12-01T21:52:00,430           to the `packages` configuration field.

2023-12-01T21:52:00,431           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,432           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,433           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,434           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,435           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,437           If you don't want 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' to be distributed and are
2023-12-01T21:52:00,437           already explicitly excluding 'SigProfilerMatrixGenerator.references.vcf_files.BRCA_example.SNV' via
2023-12-01T21:52:00,438           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,438           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,439           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,440           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,442           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,444           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,445                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,445                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,446                 directory, all directories are treated like packages.
2023-12-01T21:52:00,447           ********************************************************************************

2023-12-01T21:52:00,448   !!
2023-12-01T21:52:00,449     check.warn(importable)
2023-12-01T21:52:00,449   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.scripts' is absent from the `packages` configuration.
2023-12-01T21:52:00,450   !!

2023-12-01T21:52:00,451           ********************************************************************************
2023-12-01T21:52:00,451           ############################
2023-12-01T21:52:00,452           # Package would be ignored #
2023-12-01T21:52:00,452           ############################
2023-12-01T21:52:00,453           Python recognizes 'SigProfilerMatrixGenerator.scripts' as an importable package[^1],
2023-12-01T21:52:00,453           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,454           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,455           package, please make sure that 'SigProfilerMatrixGenerator.scripts' is explicitly added
2023-12-01T21:52:00,455           to the `packages` configuration field.

2023-12-01T21:52:00,456           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,457           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,457           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,459           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,460           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,461           If you don't want 'SigProfilerMatrixGenerator.scripts' to be distributed and are
2023-12-01T21:52:00,461           already explicitly excluding 'SigProfilerMatrixGenerator.scripts' via
2023-12-01T21:52:00,462           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,462           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,463           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,464           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,465           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,467           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,468                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,468                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,469                 directory, all directories are treated like packages.
2023-12-01T21:52:00,469           ********************************************************************************

2023-12-01T21:52:00,471   !!
2023-12-01T21:52:00,471     check.warn(importable)
2023-12-01T21:52:00,472   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.scripts.Benchmark' is absent from the `packages` configuration.
2023-12-01T21:52:00,473   !!

2023-12-01T21:52:00,474           ********************************************************************************
2023-12-01T21:52:00,475           ############################
2023-12-01T21:52:00,475           # Package would be ignored #
2023-12-01T21:52:00,476           ############################
2023-12-01T21:52:00,478           Python recognizes 'SigProfilerMatrixGenerator.scripts.Benchmark' as an importable package[^1],
2023-12-01T21:52:00,479           but it is absent from setuptools' `packages` configuration.

2023-12-01T21:52:00,480           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-01T21:52:00,481           package, please make sure that 'SigProfilerMatrixGenerator.scripts.Benchmark' is explicitly added
2023-12-01T21:52:00,481           to the `packages` configuration field.

2023-12-01T21:52:00,483           Alternatively, you can also rely on setuptools' discovery methods
2023-12-01T21:52:00,483           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-01T21:52:00,484           instead of `find_packages(...)`/`find:`).

2023-12-01T21:52:00,485           You can read more about "package discovery" on setuptools documentation page:

2023-12-01T21:52:00,486           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-01T21:52:00,487           If you don't want 'SigProfilerMatrixGenerator.scripts.Benchmark' to be distributed and are
2023-12-01T21:52:00,487           already explicitly excluding 'SigProfilerMatrixGenerator.scripts.Benchmark' via
2023-12-01T21:52:00,488           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-01T21:52:00,488           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-01T21:52:00,489           combination with a more fine grained `package-data` configuration.

2023-12-01T21:52:00,490           You can read more about "package data files" on setuptools documentation page:

2023-12-01T21:52:00,491           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-01T21:52:00,493           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-01T21:52:00,493                 even if it does not contain any `.py` files.
2023-12-01T21:52:00,494                 On the other hand, currently there is no concept of package data
2023-12-01T21:52:00,494                 directory, all directories are treated like packages.
2023-12-01T21:52:00,495           ********************************************************************************

2023-12-01T21:52:00,496   !!
2023-12-01T21:52:00,497     check.warn(importable)
2023-12-01T21:52:00,497   creating build/lib/SigProfilerMatrixGenerator/controllers
2023-12-01T21:52:00,498   copying SigProfilerMatrixGenerator/controllers/__init__.py -> build/lib/SigProfilerMatrixGenerator/controllers
2023-12-01T21:52:00,498   copying SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/lib/SigProfilerMatrixGenerator/controllers
2023-12-01T21:52:00,499   creating build/lib/SigProfilerMatrixGenerator/references
2023-12-01T21:52:00,500   creating build/lib/SigProfilerMatrixGenerator/references/CNV
2023-12-01T21:52:00,500   copying SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV
2023-12-01T21:52:00,501   copying SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/lib/SigProfilerMatrixGenerator/references/CNV
2023-12-01T21:52:00,501   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2023-12-01T21:52:00,502   copying SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2023-12-01T21:52:00,502   copying SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2023-12-01T21:52:00,503   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2023-12-01T21:52:00,504   copying SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2023-12-01T21:52:00,504   creating build/lib/SigProfilerMatrixGenerator/references/SV
2023-12-01T21:52:00,505   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input
2023-12-01T21:52:00,506   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,506   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,507   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,507   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,508   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,509   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,509   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,510   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,510   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,511   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,512   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,512   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,513   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,513   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,514   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,514   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,515   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,516   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,516   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,517   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,517   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,518   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,519   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,519   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,520   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,520   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,521   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,521   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,522   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,523   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,523   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,524   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,525   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,526   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,527   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,529   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,532   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,533   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,535   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,536   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,536   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,537   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,537   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,538   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,538   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,539   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,539   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,540   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,540   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,541   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,541   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:00,542   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,542   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,543   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,543   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,544   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,544   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,545   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,546   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,546   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,547   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,548   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,549   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,549   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,550   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,550   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,550   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,551   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,552   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,552   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,553   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,553   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,554   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,555   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,555   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,556   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,556   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,557   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,557   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,558   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,559   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,559   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,559   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,560   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,560   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,561   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,561   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,562   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,562   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,563   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,563   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,564   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,564   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,565   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,565   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,566   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,567   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,567   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,568   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,568   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,569   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,569   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:00,570   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_output
2023-12-01T21:52:00,571   copying SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.annotated.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_output
2023-12-01T21:52:00,571   copying SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.matrix.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_output
2023-12-01T21:52:00,571   copying SigProfilerMatrixGenerator/references/SV/example_output/560-Breast_RS32_counts_aggregated.pdf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_output
2023-12-01T21:52:00,572   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes
2023-12-01T21:52:00,572   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,573   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,573   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,574   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,574   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,575   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,577   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,579   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,580   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,581   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,588   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,590   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,593   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,596   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,598   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,601   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,604   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,606   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,610   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,613   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,615   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,617   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,620   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,623   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,625   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,636   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,643   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,645   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,648   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,650   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,653   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,658   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,660   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,662   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,667   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,670   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,673   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,675   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,678   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,681   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,683   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,691   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,696   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,699   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,701   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,704   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,706   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,709   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,711   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,713   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,718   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,723   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,725   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,727   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,731   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,734   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,736   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,744   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,750   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,752   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,755   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,757   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,760   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,762   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,764   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,766   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,771   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,775   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,777   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,780   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,783   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,786   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,788   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,795   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,801   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,803   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,806   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,808   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,812   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,814   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,817   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,819   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,821   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,827   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,829   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,832   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,834   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,840   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,845   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,852   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,859   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,862   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,864   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,867   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,870   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,873   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,877   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,882   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,886   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,899   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,913   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,936   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,959   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,961   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,964   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,966   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,968   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,971   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,974   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,976   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,979   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,982   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,985   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,987   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,990   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,992   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,994   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,997   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:00,999   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,002   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,008   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,015   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,022   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,029   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,032   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,034   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,037   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,039   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,042   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,046   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,050   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,054   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,066   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,080   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,102   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,121   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,123   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,126   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,128   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,130   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,133   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,136   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,139   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,142   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,145   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,148   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,150   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,153   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,155   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,158   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,160   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,163   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,167   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,172   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,179   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,185   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,188   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,190   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,192   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,195   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,198   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,202   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,206   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,209   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,221   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,233   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,251   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,272   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,275   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,277   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,279   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,282   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,285   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,288   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,292   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,295   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,298   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,301   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,304   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,307   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,309   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,313   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,316   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,321   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,328   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,336   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,343   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,346   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,348   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,350   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,353   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,356   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,359   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,363   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,366   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,377   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,387   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,405   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,425   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,427   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,429   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,432   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,434   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,437   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,440   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,443   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,446   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,449   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,452   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,455   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,457   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,460   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,462   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,465   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,467   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,472   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,477   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,482   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,487   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,490   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,492   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,494   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,497   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,500   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,504   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,508   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,511   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,523   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,535   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,546   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,559   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,561   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,564   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,566   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,568   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,571   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,574   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,577   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,581   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,585   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,590   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,594   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,597   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,600   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,614   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,616   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,619   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,622   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:01,624   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2023-12-01T21:52:01,625   copying SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2023-12-01T21:52:01,627   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2023-12-01T21:52:01,628   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2023-12-01T21:52:01,980   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2023-12-01T21:52:01,981   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2023-12-01T21:52:02,056   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2023-12-01T21:52:02,057   copying SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2023-12-01T21:52:02,274   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2023-12-01T21:52:02,275   copying SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2023-12-01T21:52:02,350   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2023-12-01T21:52:02,352   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2023-12-01T21:52:02,354   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2023-12-01T21:52:02,357   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2023-12-01T21:52:02,360   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2023-12-01T21:52:02,361   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2023-12-01T21:52:02,441   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2023-12-01T21:52:02,441   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2023-12-01T21:52:02,527   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2023-12-01T21:52:02,528   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2023-12-01T21:52:02,613   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2023-12-01T21:52:02,614   copying SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2023-12-01T21:52:02,992   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2023-12-01T21:52:02,994   copying SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2023-12-01T21:52:03,001   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2023-12-01T21:52:03,002   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2023-12-01T21:52:03,004   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,005   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,012   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,021   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,031   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,035   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,042   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,048   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,057   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,067   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,072   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,082   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,094   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,099   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,103   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,109   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,119   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,150   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,157   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,164   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,172   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,183   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,190   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,196   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,199   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,206   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:03,209   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,210   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,216   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,228   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,238   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,242   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,249   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,255   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,264   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,274   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,278   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,290   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,302   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,308   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,312   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,318   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,329   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,338   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,345   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,352   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,359   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,367   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,374   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,381   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,383   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,390   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:03,393   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:03,394   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:03,403   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:03,413   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:03,424   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:03,434   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:03,436   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:03,451   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:03,460   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,461   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,465   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,469   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,472   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,476   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,480   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,484   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,487   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,492   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,496   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,499   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,504   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,509   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,512   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,516   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,519   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,523   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,527   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,531   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,535   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,539   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,543   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,548   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,551   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,555   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,559   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,562   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,566   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,569   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,573   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,576   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,580   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,584   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,588   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,593   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,597   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,601   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,605   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,610   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:03,614   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2023-12-01T21:52:03,616   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2023-12-01T21:52:03,619   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,621   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,629   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,643   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,648   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,654   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,660   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,665   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,670   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,677   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,682   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,687   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,695   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,705   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,712   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,721   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,730   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,739   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,750   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,757   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,768   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,771   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,778   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:03,781   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,783   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,790   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,803   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,811   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,819   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,827   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,833   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,838   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,846   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,851   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,856   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,864   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,874   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,881   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,888   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,897   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,905   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,916   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,924   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,933   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,940   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:03,943   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:03,944   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:03,952   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:03,965   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:03,970   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:03,978   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:03,984   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:03,992   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,000   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,008   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,013   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,020   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,029   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,044   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,053   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,064   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,074   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,083   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,096   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,104   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,116   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,118   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,126   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:04,128   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,129   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,135   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,139   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,144   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,148   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,153   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,159   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,163   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,168   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,172   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,176   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,185   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,190   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,197   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,204   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,209   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,215   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,220   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,225   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,231   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,236   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,239   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,243   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:04,245   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,247   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,250   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,253   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,257   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,260   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,263   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,265   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,272   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,276   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,279   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,283   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,287   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,291   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,295   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,298   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,301   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,306   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:04,310   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2023-12-01T21:52:04,311   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2023-12-01T21:52:04,313   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,314   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,318   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,322   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,326   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,329   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,332   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,336   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,340   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,343   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,347   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,351   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,356   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,359   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,362   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,365   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,369   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,373   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,376   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,380   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,383   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,387   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,390   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,394   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,398   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:04,401   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,403   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,406   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,411   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,415   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,419   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,422   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,426   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,429   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,434   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,437   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,441   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,445   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,448   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,451   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,454   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,458   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,462   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,466   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,469   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,473   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,476   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,479   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,483   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,486   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:04,489   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:04,490   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:04,495   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:04,501   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:04,507   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:04,512   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:04,514   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:04,521   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:04,526   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,528   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,532   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,536   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,540   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,543   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,547   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,551   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,555   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,558   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,562   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,565   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,570   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,573   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,577   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,580   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,583   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,587   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,590   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,594   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,597   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,601   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,604   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,607   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,611   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,614   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,618   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,621   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,624   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,627   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,631   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,634   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,637   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,640   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,644   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,648   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,651   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,655   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,658   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,662   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:04,665   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,667   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,670   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,676   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,679   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,683   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,687   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,690   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,693   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,698   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,702   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,705   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,709   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,713   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,716   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,720   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,724   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,728   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,732   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,736   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,740   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,744   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:04,746   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,748   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,751   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,756   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,759   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,762   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,766   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,770   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,773   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,777   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,780   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,783   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,787   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,793   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,796   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,800   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,804   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,809   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,813   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,817   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,821   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,825   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:04,828   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,829   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,833   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,838   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,842   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,845   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,849   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,852   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,856   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,859   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,863   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,866   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,870   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,876   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,879   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,883   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,888   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,892   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,896   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,900   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,904   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,907   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:04,909   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,911   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,915   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,918   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,922   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,925   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,928   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,932   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,936   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,939   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,942   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,945   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,951   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,954   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,958   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,962   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,966   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,970   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,974   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,978   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,982   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,985   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,988   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,992   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:04,994   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:04,995   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:04,999   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,002   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,006   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,009   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,012   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,015   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,018   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,021   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,025   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,028   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,031   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,035   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,038   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,042   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,045   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:05,048   creating build/lib/SigProfilerMatrixGenerator/references/vcf_files
2023-12-01T21:52:05,049   creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example
2023-12-01T21:52:05,049   creating build/lib/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV
2023-12-01T21:52:05,051   copying SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV/BRCA_example_subs_simple.txt -> build/lib/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV
2023-12-01T21:52:05,083   creating build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,085   copying SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,088   copying SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,094   copying SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,098   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,102   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,104   copying SigProfilerMatrixGenerator/scripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,107   copying SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,111   copying SigProfilerMatrixGenerator/scripts/ref_install.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,113   copying SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,116   copying SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,119   copying SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,123   copying SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/lib/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:05,126   creating build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,127   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,131   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,133   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,138   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,140   copying SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,142   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,146   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,149   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,153   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:05,184   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-12-01T21:52:05,184   !!

2023-12-01T21:52:05,185           ********************************************************************************
2023-12-01T21:52:05,186           Please avoid running ``setup.py`` directly.
2023-12-01T21:52:05,187           Instead, use pypa/build, pypa/installer or other
2023-12-01T21:52:05,187           standards-based tools.

2023-12-01T21:52:05,189           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-12-01T21:52:05,189           ********************************************************************************

2023-12-01T21:52:05,190   !!
2023-12-01T21:52:05,191     self.initialize_options()
2023-12-01T21:52:05,210   installing to build/bdist.linux-aarch64/wheel
2023-12-01T21:52:05,211   running install
2023-12-01T21:52:05,234   running install_lib
2023-12-01T21:52:05,260   creating build/bdist.linux-aarch64
2023-12-01T21:52:05,261   creating build/bdist.linux-aarch64/wheel
2023-12-01T21:52:05,262   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator
2023-12-01T21:52:05,264   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/controllers
2023-12-01T21:52:05,265   copying build/lib/SigProfilerMatrixGenerator/controllers/__init__.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/controllers
2023-12-01T21:52:05,267   copying build/lib/SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/controllers
2023-12-01T21:52:05,269   copying build/lib/SigProfilerMatrixGenerator/test_helpers.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator
2023-12-01T21:52:05,272   copying build/lib/SigProfilerMatrixGenerator/__init__.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator
2023-12-01T21:52:05,273   copying build/lib/SigProfilerMatrixGenerator/version.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator
2023-12-01T21:52:05,276   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references
2023-12-01T21:52:05,277   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes
2023-12-01T21:52:05,279   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome
2023-12-01T21:52:05,280   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2023-12-01T21:52:05,281   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2023-12-01T21:52:05,561   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2023-12-01T21:52:05,562   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2023-12-01T21:52:05,771   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2023-12-01T21:52:05,772   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2023-12-01T21:52:06,135   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome
2023-12-01T21:52:06,137   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2023-12-01T21:52:06,139   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2023-12-01T21:52:06,220   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2023-12-01T21:52:06,221   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2023-12-01T21:52:06,228   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2023-12-01T21:52:06,229   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2023-12-01T21:52:06,308   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2023-12-01T21:52:06,310   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2023-12-01T21:52:06,386   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2023-12-01T21:52:06,387   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2023-12-01T21:52:06,389   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2023-12-01T21:52:06,392   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2023-12-01T21:52:06,395   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2023-12-01T21:52:06,396   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2023-12-01T21:52:06,474   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2023-12-01T21:52:06,475   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2023-12-01T21:52:06,556   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2023-12-01T21:52:06,558   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,559   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,562   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,565   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,568   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,571   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,574   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,577   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,580   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,584   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,587   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,591   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,594   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,597   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,601   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,604   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,607   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,611   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,614   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,617   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,620   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,623   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,626   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,629   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,633   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2023-12-01T21:52:06,635   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:06,637   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:06,642   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:06,648   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:06,653   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:06,659   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:06,664   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:06,669   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2023-12-01T21:52:06,672   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,674   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,677   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,683   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,688   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,692   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,695   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,699   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,706   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,710   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,714   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,718   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,723   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,726   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,730   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,733   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,736   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,740   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,744   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,748   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,752   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,755   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,759   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,762   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2023-12-01T21:52:06,764   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2023-12-01T21:52:06,767   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,769   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,772   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,775   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,778   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,782   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,785   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,789   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,792   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,796   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,800   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,804   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,808   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,812   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,816   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,819   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,822   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,826   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,829   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,832   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,835   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,839   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,841   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,844   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,849   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2023-12-01T21:52:06,852   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,854   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,858   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,862   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,866   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,869   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,873   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,876   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,879   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,882   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,886   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,889   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,892   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,895   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,899   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,902   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,906   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2023-12-01T21:52:06,910   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,911   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,916   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,920   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,925   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,929   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,933   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,937   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,941   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,946   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,950   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,954   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,957   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,960   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,964   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,968   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,971   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,974   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,978   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,981   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,985   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,988   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2023-12-01T21:52:06,992   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:06,993   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:06,996   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,000   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,003   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,006   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,010   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,013   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,016   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,019   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,023   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,026   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,029   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,033   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,036   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,040   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,043   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,046   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,050   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,053   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,056   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,059   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,063   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,066   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,069   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,073   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,076   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,079   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,083   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,086   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,089   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,092   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,096   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,099   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,102   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,106   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,109   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,112   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,116   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,118   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2023-12-01T21:52:07,122   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,123   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,127   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,130   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,134   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,138   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,142   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,146   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,149   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,154   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,158   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,162   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,166   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,169   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,173   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,177   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,180   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,184   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,188   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,191   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,194   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,197   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2023-12-01T21:52:07,201   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,202   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,205   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,208   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,211   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,214   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,217   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,221   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,224   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,227   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,231   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,234   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,238   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,241   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,245   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,248   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,251   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,255   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,258   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,262   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,265   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,268   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2023-12-01T21:52:07,276   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,277   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,281   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,283   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,285   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,288   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,291   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,294   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,297   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,303   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,306   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,311   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,314   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,317   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,320   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,322   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,327   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,331   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,333   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,336   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,338   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,340   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,343   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,345   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,347   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,351   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,354   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,359   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,373   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,376   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,379   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,382   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,384   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,409   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,412   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,414   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,422   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,426   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,428   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,432   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,435   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,441   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,443   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,445   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,465   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,467   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,469   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,471   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,474   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,477   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,484   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,486   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,491   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,494   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,496   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,499   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,502   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,505   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,507   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,510   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,530   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,532   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,534   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,537   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,540   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,542   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,566   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,570   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,572   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,574   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,577   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,580   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,582   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,584   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,586   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,594   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,596   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,598   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,604   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,606   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,609   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,611   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,614   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,618   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,620   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,623   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,625   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,627   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,633   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,638   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,645   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,648   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,650   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,653   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,655   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,659   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,661   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,668   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,670   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,673   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,677   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,679   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,682   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,684   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,687   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,689   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,692   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,694   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,696   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,699   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,712   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,714   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,732   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,734   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,747   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,750   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,752   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,762   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,768   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,771   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,774   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,776   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,779   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,783   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,785   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,787   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,790   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,793   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,794   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,798   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,801   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,803   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,806   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,813   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,816   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,828   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,831   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,834   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,841   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,843   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,845   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,856   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,871   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,874   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,876   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,879   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,881   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,883   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,886   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,893   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,895   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,897   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,900   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,902   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,909   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,910   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,912   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,919   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,921   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,933   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,936   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,948   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,960   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,977   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,984   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,988   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:07,990   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,015   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,018   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,020   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,022   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,025   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,028   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,030   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,033   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,037   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,039   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,054   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,056   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,058   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,061   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,063   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,066   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,077   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,080   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,082   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,085   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,088   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,090   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,092   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,100   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,103   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,105   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,112   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,114   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,121   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,124   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,127   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,140   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,143   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,146   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,165   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,167   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,170   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,172   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,174   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,176   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,178   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,182   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,187   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,189   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,192   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,194   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,199   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,202   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,204   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,207   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,212   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,215   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,218   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,221   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,224   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,226   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,228   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,230   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,233   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,236   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,238   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,242   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,255   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,258   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,263   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,265   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,269   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,272   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,274   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,276   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,278   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,287   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,289   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,291   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,294   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,296   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,298   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,302   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,306   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,308   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2023-12-01T21:52:08,312   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2023-12-01T21:52:08,314   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,315   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,317   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,325   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,333   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,337   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,347   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,358   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,362   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,368   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,380   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,387   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,394   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,400   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,406   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,417   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,424   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,431   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,433   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,438   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,446   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,452   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,457   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,466   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,471   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,483   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2023-12-01T21:52:08,490   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:08,491   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:08,493   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:08,501   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:08,510   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:08,519   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:08,527   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:08,539   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2023-12-01T21:52:08,552   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,554   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,556   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,560   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,566   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,570   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,575   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,578   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,583   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,586   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,592   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,596   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,600   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,606   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,610   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,614   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,619   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,621   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,625   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,629   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,634   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,637   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,641   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,650   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2023-12-01T21:52:08,653   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2023-12-01T21:52:08,656   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,657   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,659   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,668   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,677   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,681   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,692   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,702   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,707   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,714   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,724   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,732   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,740   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,745   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,751   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,767   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,779   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,787   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,790   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,794   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,802   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,809   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,813   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,823   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,829   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,840   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2023-12-01T21:52:08,848   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,849   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,851   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,854   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,857   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,860   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,863   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,867   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,870   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,872   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,875   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,878   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,881   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,884   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,887   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,890   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,893   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,896   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2023-12-01T21:52:08,900   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,901   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,903   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,908   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,914   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,920   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,929   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,934   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,940   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,946   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,953   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,961   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,968   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,978   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,989   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,996   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:08,999   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:09,004   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:09,011   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:09,018   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:09,023   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:09,031   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:09,038   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2023-12-01T21:52:09,045   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,046   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,049   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,052   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,055   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,058   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,061   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,064   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,067   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,071   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,074   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,077   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,080   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,083   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,086   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,090   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,093   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,096   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,100   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,105   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,108   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,113   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,117   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,121   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,125   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,128   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,132   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,135   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,140   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,143   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,148   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,153   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,156   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,161   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,164   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,168   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,171   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,174   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,180   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,186   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2023-12-01T21:52:09,192   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2023-12-01T21:52:09,193   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2023-12-01T21:52:09,196   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,197   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,203   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,211   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,219   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,228   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,233   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,239   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,245   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,253   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,260   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,266   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,277   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,291   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,298   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,301   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,306   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,313   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,318   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,323   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,337   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2023-12-01T21:52:09,344   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,345   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,348   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,354   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,362   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,369   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,384   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,389   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,396   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,404   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,413   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,424   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,430   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,443   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,455   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,462   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,464   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,469   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,477   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,485   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,491   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,499   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,508   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2023-12-01T21:52:09,514   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/vcf_files
2023-12-01T21:52:09,516   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example
2023-12-01T21:52:09,518   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV
2023-12-01T21:52:09,519   copying build/lib/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV/BRCA_example_subs_simple.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV
2023-12-01T21:52:09,553   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV
2023-12-01T21:52:09,554   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_output
2023-12-01T21:52:09,556   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.annotated.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_output
2023-12-01T21:52:09,569   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.matrix.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_output
2023-12-01T21:52:09,571   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_output/560-Breast_RS32_counts_aggregated.pdf -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_output
2023-12-01T21:52:09,575   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input
2023-12-01T21:52:09,577   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,578   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,581   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,583   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,585   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,588   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,591   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,594   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,596   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,599   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,601   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,604   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,606   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,609   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,612   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,614   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,617   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,620   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,623   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,625   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,627   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,630   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,632   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,634   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,636   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,639   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,641   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,643   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,645   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,647   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,649   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,651   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,656   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,658   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,661   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,664   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,667   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,670   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,673   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,675   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,678   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,681   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,684   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,686   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,688   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,690   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,692   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,694   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,697   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,699   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,702   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2023-12-01T21:52:09,706   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,707   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,709   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,712   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,715   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,717   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,719   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,722   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,725   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,727   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,730   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,732   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,735   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,737   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,740   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,743   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,746   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,749   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,752   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,754   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,757   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,759   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,761   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,764   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,767   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,769   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,772   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,774   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,776   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,779   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,781   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,784   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,786   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,789   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,792   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,794   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,798   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,801   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,803   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,805   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,808   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,811   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,813   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,815   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,817   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,819   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,822   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,825   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,827   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,830   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,833   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2023-12-01T21:52:09,835   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/CNV
2023-12-01T21:52:09,836   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/CNV
2023-12-01T21:52:09,839   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/CNV/example_output
2023-12-01T21:52:09,840   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/CNV/example_output
2023-12-01T21:52:09,843   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/CNV
2023-12-01T21:52:09,845   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2023-12-01T21:52:09,846   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2023-12-01T21:52:09,855   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2023-12-01T21:52:09,874   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,875   copying build/lib/SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,881   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,882   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,887   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,889   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,891   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,894   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,897   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,899   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,903   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,905   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2023-12-01T21:52:09,909   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,913   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,915   copying build/lib/SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,918   copying build/lib/SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,922   copying build/lib/SigProfilerMatrixGenerator/scripts/__init__.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,924   copying build/lib/SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,926   copying build/lib/SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,929   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,931   copying build/lib/SigProfilerMatrixGenerator/scripts/ref_install.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,933   copying build/lib/SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,936   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator/scripts
2023-12-01T21:52:09,938   copying build/lib/SigProfilerMatrixGenerator/install.py -> build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator
2023-12-01T21:52:09,941   running install_egg_info
2023-12-01T21:52:09,973   Copying SigProfilerMatrixGenerator.egg-info to build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator-1.2.20-py3.11.egg-info
2023-12-01T21:52:09,991   running install_scripts
2023-12-01T21:52:10,012   creating build/bdist.linux-aarch64/wheel/SigProfilerMatrixGenerator-1.2.20.dist-info/WHEEL
2023-12-01T21:52:10,014   creating '/tmp/pip-wheel-xvlnf88x/SigProfilerMatrixGenerator-1.2.20-py3-none-any.whl' and adding 'build/bdist.linux-aarch64/wheel' to it
2023-12-01T21:52:10,017   adding 'SigProfilerMatrixGenerator/__init__.py'
2023-12-01T21:52:10,022   adding 'SigProfilerMatrixGenerator/install.py'
2023-12-01T21:52:10,024   adding 'SigProfilerMatrixGenerator/test_helpers.py'
2023-12-01T21:52:10,025   adding 'SigProfilerMatrixGenerator/version.py'
2023-12-01T21:52:10,027   adding 'SigProfilerMatrixGenerator/controllers/__init__.py'
2023-12-01T21:52:10,029   adding 'SigProfilerMatrixGenerator/controllers/cli_controller.py'
2023-12-01T21:52:10,031   adding 'SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv'
2023-12-01T21:52:10,033   adding 'SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt'
2023-12-01T21:52:10,163   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv'
2023-12-01T21:52:10,233   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv'
2023-12-01T21:52:10,239   adding 'SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv'
2023-12-01T21:52:10,246   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,248   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,249   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,251   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,253   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,254   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,255   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,258   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,260   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,264   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,265   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,268   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,271   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,273   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,275   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,276   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,277   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,279   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,280   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,282   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,284   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,286   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,288   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,290   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,292   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,293   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,299   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,301   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,304   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,306   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,308   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,309   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,313   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,314   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,316   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,321   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,323   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,326   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,330   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,332   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,337   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,339   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,343   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,345   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,347   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,348   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,350   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,351   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,353   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,354   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv'
2023-12-01T21:52:10,358   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv'
2023-12-01T21:52:10,360   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv'
2023-12-01T21:52:10,362   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv'
2023-12-01T21:52:10,363   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv'
2023-12-01T21:52:10,365   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv'
2023-12-01T21:52:10,366   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv'
2023-12-01T21:52:10,367   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv'
2023-12-01T21:52:10,369   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv'
2023-12-01T21:52:10,370   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv'
2023-12-01T21:52:10,372   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv'
2023-12-01T21:52:10,373   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv'
2023-12-01T21:52:10,376   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv'
2023-12-01T21:52:10,379   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv'
2023-12-01T21:52:10,380   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv'
2023-12-01T21:52:10,383   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv'
2023-12-01T21:52:10,386   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv'
2023-12-01T21:52:10,388   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv'
2023-12-01T21:52:10,391   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv'
2023-12-01T21:52:10,392   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv'
2023-12-01T21:52:10,395   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv'
2023-12-01T21:52:10,397   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv'
2023-12-01T21:52:10,398   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv'
2023-12-01T21:52:10,400   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv'
2023-12-01T21:52:10,402   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv'
2023-12-01T21:52:10,404   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv'
2023-12-01T21:52:10,407   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv'
2023-12-01T21:52:10,412   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv'
2023-12-01T21:52:10,415   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv'
2023-12-01T21:52:10,417   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv'
2023-12-01T21:52:10,418   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv'
2023-12-01T21:52:10,420   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv'
2023-12-01T21:52:10,421   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv'
2023-12-01T21:52:10,423   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv'
2023-12-01T21:52:10,424   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv'
2023-12-01T21:52:10,427   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv'
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2023-12-01T21:52:10,440   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv'
2023-12-01T21:52:10,442   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv'
2023-12-01T21:52:10,443   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv'
2023-12-01T21:52:10,445   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv'
2023-12-01T21:52:10,448   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv'
2023-12-01T21:52:10,449   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv'
2023-12-01T21:52:10,451   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv'
2023-12-01T21:52:10,452   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv'
2023-12-01T21:52:10,454   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv'
2023-12-01T21:52:10,455   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv'
2023-12-01T21:52:10,458   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv'
2023-12-01T21:52:10,460   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv'
2023-12-01T21:52:10,461   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv'
2023-12-01T21:52:10,565   adding 'SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.annotated.tsv'
2023-12-01T21:52:10,571   adding 'SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.matrix.tsv'
2023-12-01T21:52:10,573   adding 'SigProfilerMatrixGenerator/references/SV/example_output/560-Breast_RS32_counts_aggregated.pdf'
2023-12-01T21:52:10,605   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv'
2023-12-01T21:52:10,629   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv'
2023-12-01T21:52:10,630   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv'
2023-12-01T21:52:10,632   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv'
2023-12-01T21:52:10,636   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv'
2023-12-01T21:52:10,640   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv'
2023-12-01T21:52:10,641   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv'
2023-12-01T21:52:10,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv'
2023-12-01T21:52:10,849   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv'
2023-12-01T21:52:10,851   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv'
2023-12-01T21:52:10,853   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv'
2023-12-01T21:52:10,855   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv'
2023-12-01T21:52:10,856   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv'
2023-12-01T21:52:10,858   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv'
2023-12-01T21:52:10,860   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv'
2023-12-01T21:52:10,861   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv'
2023-12-01T21:52:10,887   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv'
2023-12-01T21:52:10,909   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv'
2023-12-01T21:52:10,911   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv'
2023-12-01T21:52:10,912   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv'
2023-12-01T21:52:10,917   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv'
2023-12-01T21:52:10,921   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv'
2023-12-01T21:52:10,922   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv'
2023-12-01T21:52:11,027   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv'
2023-12-01T21:52:11,132   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv'
2023-12-01T21:52:11,135   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv'
2023-12-01T21:52:11,136   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv'
2023-12-01T21:52:11,138   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv'
2023-12-01T21:52:11,139   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv'
2023-12-01T21:52:11,141   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv'
2023-12-01T21:52:11,142   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv'
2023-12-01T21:52:11,144   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv'
2023-12-01T21:52:11,167   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv'
2023-12-01T21:52:11,186   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv'
2023-12-01T21:52:11,187   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv'
2023-12-01T21:52:11,189   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv'
2023-12-01T21:52:11,192   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv'
2023-12-01T21:52:11,196   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv'
2023-12-01T21:52:11,197   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv'
2023-12-01T21:52:11,287   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv'
2023-12-01T21:52:11,374   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv'
2023-12-01T21:52:11,377   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv'
2023-12-01T21:52:11,379   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv'
2023-12-01T21:52:11,381   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv'
2023-12-01T21:52:11,382   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv'
2023-12-01T21:52:11,384   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv'
2023-12-01T21:52:11,386   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv'
2023-12-01T21:52:11,387   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv'
2023-12-01T21:52:11,412   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv'
2023-12-01T21:52:11,430   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv'
2023-12-01T21:52:11,432   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv'
2023-12-01T21:52:11,433   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv'
2023-12-01T21:52:11,437   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv'
2023-12-01T21:52:11,440   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv'
2023-12-01T21:52:11,442   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv'
2023-12-01T21:52:11,532   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv'
2023-12-01T21:52:11,621   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv'
2023-12-01T21:52:11,623   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv'
2023-12-01T21:52:11,625   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv'
2023-12-01T21:52:11,627   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv'
2023-12-01T21:52:11,629   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv'
2023-12-01T21:52:11,630   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv'
2023-12-01T21:52:11,632   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv'
2023-12-01T21:52:11,633   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv'
2023-12-01T21:52:11,657   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv'
2023-12-01T21:52:11,677   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv'
2023-12-01T21:52:11,679   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv'
2023-12-01T21:52:11,680   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv'
2023-12-01T21:52:11,684   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv'
2023-12-01T21:52:11,687   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv'
2023-12-01T21:52:11,689   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv'
2023-12-01T21:52:11,784   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv'
2023-12-01T21:52:11,878   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv'
2023-12-01T21:52:11,881   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv'
2023-12-01T21:52:11,883   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv'
2023-12-01T21:52:11,884   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv'
2023-12-01T21:52:11,897   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv'
2023-12-01T21:52:11,899   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv'
2023-12-01T21:52:11,901   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv'
2023-12-01T21:52:11,903   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv'
2023-12-01T21:52:11,905   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv'
2023-12-01T21:52:11,967   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv'
2023-12-01T21:52:11,969   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv'
2023-12-01T21:52:11,970   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv'
2023-12-01T21:52:11,972   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv'
2023-12-01T21:52:12,007   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv'
2023-12-01T21:52:12,044   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv'
2023-12-01T21:52:12,110   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv'
2023-12-01T21:52:12,178   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv'
2023-12-01T21:52:12,181   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv'
2023-12-01T21:52:12,183   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv'
2023-12-01T21:52:12,185   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv'
2023-12-01T21:52:12,186   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv'
2023-12-01T21:52:12,194   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv'
2023-12-01T21:52:12,203   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv'
2023-12-01T21:52:12,218   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv'
2023-12-01T21:52:12,234   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv'
2023-12-01T21:52:12,380   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv'
2023-12-01T21:52:12,525   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv'
2023-12-01T21:52:12,796   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv'
2023-12-01T21:52:13,048   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv'
2023-12-01T21:52:13,056   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv'
2023-12-01T21:52:13,057   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv'
2023-12-01T21:52:13,059   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv'
2023-12-01T21:52:13,060   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv'
2023-12-01T21:52:13,063   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv'
2023-12-01T21:52:13,065   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv'
2023-12-01T21:52:13,068   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv'
2023-12-01T21:52:13,072   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv'
2023-12-01T21:52:13,074   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv'
2023-12-01T21:52:13,077   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv'
2023-12-01T21:52:13,080   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv'
2023-12-01T21:52:13,082   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv'
2023-12-01T21:52:13,085   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv'
2023-12-01T21:52:13,086   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv'
2023-12-01T21:52:13,088   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv'
2023-12-01T21:52:13,089   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv'
2023-12-01T21:52:13,091   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv'
2023-12-01T21:52:13,127   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv'
2023-12-01T21:52:13,194   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv'
2023-12-01T21:52:13,260   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv'
2023-12-01T21:52:13,325   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv'
2023-12-01T21:52:13,328   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv'
2023-12-01T21:52:13,330   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv'
2023-12-01T21:52:13,332   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv'
2023-12-01T21:52:13,333   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv'
2023-12-01T21:52:13,341   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv'
2023-12-01T21:52:13,357   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv'
2023-12-01T21:52:13,372   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv'
2023-12-01T21:52:13,381   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv'
2023-12-01T21:52:13,527   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv'
2023-12-01T21:52:13,673   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv'
2023-12-01T21:52:13,941   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv'
2023-12-01T21:52:14,195   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv'
2023-12-01T21:52:14,204   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv'
2023-12-01T21:52:14,205   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv'
2023-12-01T21:52:14,207   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv'
2023-12-01T21:52:14,208   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv'
2023-12-01T21:52:14,211   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv'
2023-12-01T21:52:14,214   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv'
2023-12-01T21:52:14,218   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv'
2023-12-01T21:52:14,221   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv'
2023-12-01T21:52:14,224   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv'
2023-12-01T21:52:14,226   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv'
2023-12-01T21:52:14,229   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv'
2023-12-01T21:52:14,232   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv'
2023-12-01T21:52:14,234   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv'
2023-12-01T21:52:14,236   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv'
2023-12-01T21:52:14,237   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv'
2023-12-01T21:52:14,239   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv'
2023-12-01T21:52:14,269   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv'
2023-12-01T21:52:14,301   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv'
2023-12-01T21:52:14,357   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv'
2023-12-01T21:52:14,414   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv'
2023-12-01T21:52:14,417   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv'
2023-12-01T21:52:14,419   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv'
2023-12-01T21:52:14,421   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv'
2023-12-01T21:52:14,422   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv'
2023-12-01T21:52:14,429   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv'
2023-12-01T21:52:14,437   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv'
2023-12-01T21:52:14,450   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv'
2023-12-01T21:52:14,457   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv'
2023-12-01T21:52:14,584   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv'
2023-12-01T21:52:14,712   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv'
2023-12-01T21:52:14,945   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv'
2023-12-01T21:52:15,166   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv'
2023-12-01T21:52:15,173   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv'
2023-12-01T21:52:15,175   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv'
2023-12-01T21:52:15,176   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv'
2023-12-01T21:52:15,178   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv'
2023-12-01T21:52:15,181   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv'
2023-12-01T21:52:15,184   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv'
2023-12-01T21:52:15,187   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv'
2023-12-01T21:52:15,189   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv'
2023-12-01T21:52:15,192   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv'
2023-12-01T21:52:15,194   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv'
2023-12-01T21:52:15,197   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv'
2023-12-01T21:52:15,199   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv'
2023-12-01T21:52:15,200   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv'
2023-12-01T21:52:15,202   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv'
2023-12-01T21:52:15,204   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv'
2023-12-01T21:52:15,235   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv'
2023-12-01T21:52:15,266   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv'
2023-12-01T21:52:15,323   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv'
2023-12-01T21:52:15,380   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv'
2023-12-01T21:52:15,384   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv'
2023-12-01T21:52:15,385   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv'
2023-12-01T21:52:15,387   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv'
2023-12-01T21:52:15,389   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv'
2023-12-01T21:52:15,396   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv'
2023-12-01T21:52:15,403   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv'
2023-12-01T21:52:15,416   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv'
2023-12-01T21:52:15,423   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv'
2023-12-01T21:52:15,550   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv'
2023-12-01T21:52:15,678   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv'
2023-12-01T21:52:15,910   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv'
2023-12-01T21:52:16,132   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv'
2023-12-01T21:52:16,140   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv'
2023-12-01T21:52:16,141   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv'
2023-12-01T21:52:16,143   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv'
2023-12-01T21:52:16,144   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv'
2023-12-01T21:52:16,146   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv'
2023-12-01T21:52:16,149   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv'
2023-12-01T21:52:16,152   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv'
2023-12-01T21:52:16,155   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv'
2023-12-01T21:52:16,157   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv'
2023-12-01T21:52:16,160   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv'
2023-12-01T21:52:16,162   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv'
2023-12-01T21:52:16,165   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv'
2023-12-01T21:52:16,166   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv'
2023-12-01T21:52:16,168   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv'
2023-12-01T21:52:16,170   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv'
2023-12-01T21:52:16,172   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv'
2023-12-01T21:52:16,203   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv'
2023-12-01T21:52:16,237   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv'
2023-12-01T21:52:16,271   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv'
2023-12-01T21:52:16,306   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv'
2023-12-01T21:52:16,308   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv'
2023-12-01T21:52:16,310   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv'
2023-12-01T21:52:16,312   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv'
2023-12-01T21:52:16,313   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv'
2023-12-01T21:52:16,321   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv'
2023-12-01T21:52:16,328   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv'
2023-12-01T21:52:16,336   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv'
2023-12-01T21:52:16,344   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv'
2023-12-01T21:52:16,473   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv'
2023-12-01T21:52:16,612   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv'
2023-12-01T21:52:16,751   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv'
2023-12-01T21:52:16,894   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv'
2023-12-01T21:52:16,899   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv'
2023-12-01T21:52:16,901   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv'
2023-12-01T21:52:16,902   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv'
2023-12-01T21:52:16,904   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv'
2023-12-01T21:52:16,906   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv'
2023-12-01T21:52:16,908   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv'
2023-12-01T21:52:16,911   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv'
2023-12-01T21:52:16,914   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv'
2023-12-01T21:52:16,922   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt'
2023-12-01T21:52:16,967   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv'
2023-12-01T21:52:16,975   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv'
2023-12-01T21:52:16,977   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv'
2023-12-01T21:52:16,987   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv'
2023-12-01T21:52:17,154   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv'
2023-12-01T21:52:17,160   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv'
2023-12-01T21:52:17,163   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv'
2023-12-01T21:52:17,166   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv'
2023-12-01T21:52:17,167   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv'
2023-12-01T21:52:17,169   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py'
2023-12-01T21:52:19,904   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list'
2023-12-01T21:52:20,964   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list'
2023-12-01T21:52:22,237   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list'
2023-12-01T21:52:23,133   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list'
2023-12-01T21:52:23,163   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list'
2023-12-01T21:52:23,164   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt'
2023-12-01T21:52:23,167   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv'
2023-12-01T21:52:24,043   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list'
2023-12-01T21:52:24,947   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list'
2023-12-01T21:52:25,848   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list'
2023-12-01T21:52:28,154   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list'
2023-12-01T21:52:28,354   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list'
2023-12-01T21:52:28,357   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py'
2023-12-01T21:52:28,379   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt'
2023-12-01T21:52:28,422   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt'
2023-12-01T21:52:28,464   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt'
2023-12-01T21:52:28,475   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt'
2023-12-01T21:52:28,499   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt'
2023-12-01T21:52:28,521   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt'
2023-12-01T21:52:28,552   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt'
2023-12-01T21:52:28,595   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt'
2023-12-01T21:52:28,609   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt'
2023-12-01T21:52:28,660   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt'
2023-12-01T21:52:28,722   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt'
2023-12-01T21:52:28,740   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt'
2023-12-01T21:52:28,747   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt'
2023-12-01T21:52:28,762   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt'
2023-12-01T21:52:28,807   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt'
2023-12-01T21:52:28,848   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt'
2023-12-01T21:52:28,875   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt'
2023-12-01T21:52:28,904   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt'
2023-12-01T21:52:28,935   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt'
2023-12-01T21:52:28,966   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt'
2023-12-01T21:52:28,991   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt'
2023-12-01T21:52:29,014   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt'
2023-12-01T21:52:29,016   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt'
2023-12-01T21:52:29,038   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt'
2023-12-01T21:52:29,042   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt'
2023-12-01T21:52:29,064   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt'
2023-12-01T21:52:29,109   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt'
2023-12-01T21:52:29,150   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt'
2023-12-01T21:52:29,162   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt'
2023-12-01T21:52:29,186   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt'
2023-12-01T21:52:29,208   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt'
2023-12-01T21:52:29,240   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt'
2023-12-01T21:52:29,282   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt'
2023-12-01T21:52:29,296   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt'
2023-12-01T21:52:29,347   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt'
2023-12-01T21:52:29,409   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt'
2023-12-01T21:52:29,428   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt'
2023-12-01T21:52:29,435   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt'
2023-12-01T21:52:29,450   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt'
2023-12-01T21:52:29,495   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt'
2023-12-01T21:52:29,538   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt'
2023-12-01T21:52:29,566   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt'
2023-12-01T21:52:29,596   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt'
2023-12-01T21:52:29,629   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt'
2023-12-01T21:52:29,660   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt'
2023-12-01T21:52:29,686   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt'
2023-12-01T21:52:29,710   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt'
2023-12-01T21:52:29,712   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt'
2023-12-01T21:52:29,735   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt'
2023-12-01T21:52:29,739   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt'
2023-12-01T21:52:29,773   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt'
2023-12-01T21:52:29,816   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt'
2023-12-01T21:52:29,862   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt'
2023-12-01T21:52:29,902   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt'
2023-12-01T21:52:29,905   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt'
2023-12-01T21:52:29,963   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt'
2023-12-01T21:52:30,001   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt'
2023-12-01T21:52:30,011   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt'
2023-12-01T21:52:30,017   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt'
2023-12-01T21:52:30,023   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt'
2023-12-01T21:52:30,028   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt'
2023-12-01T21:52:30,032   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt'
2023-12-01T21:52:30,037   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt'
2023-12-01T21:52:30,043   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt'
2023-12-01T21:52:30,049   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt'
2023-12-01T21:52:30,057   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt'
2023-12-01T21:52:30,060   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt'
2023-12-01T21:52:30,074   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt'
2023-12-01T21:52:30,085   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt'
2023-12-01T21:52:30,090   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt'
2023-12-01T21:52:30,093   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt'
2023-12-01T21:52:30,097   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt'
2023-12-01T21:52:30,103   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt'
2023-12-01T21:52:30,108   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt'
2023-12-01T21:52:30,114   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt'
2023-12-01T21:52:30,120   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt'
2023-12-01T21:52:30,124   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt'
2023-12-01T21:52:30,127   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt'
2023-12-01T21:52:30,135   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt'
2023-12-01T21:52:30,140   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt'
2023-12-01T21:52:30,143   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt'
2023-12-01T21:52:30,146   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt'
2023-12-01T21:52:30,149   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt'
2023-12-01T21:52:30,152   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt'
2023-12-01T21:52:30,155   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt'
2023-12-01T21:52:30,158   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt'
2023-12-01T21:52:30,161   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt'
2023-12-01T21:52:30,164   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt'
2023-12-01T21:52:30,170   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt'
2023-12-01T21:52:30,176   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt'
2023-12-01T21:52:30,187   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt'
2023-12-01T21:52:30,197   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt'
2023-12-01T21:52:30,205   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt'
2023-12-01T21:52:30,212   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt'
2023-12-01T21:52:30,224   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt'
2023-12-01T21:52:30,233   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt'
2023-12-01T21:52:30,236   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt'
2023-12-01T21:52:30,260   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt'
2023-12-01T21:52:30,295   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt'
2023-12-01T21:52:30,312   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt'
2023-12-01T21:52:30,330   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt'
2023-12-01T21:52:30,349   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt'
2023-12-01T21:52:30,368   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt'
2023-12-01T21:52:30,384   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt'
2023-12-01T21:52:30,407   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt'
2023-12-01T21:52:30,418   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt'
2023-12-01T21:52:30,432   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt'
2023-12-01T21:52:30,461   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt'
2023-12-01T21:52:30,503   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt'
2023-12-01T21:52:30,529   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt'
2023-12-01T21:52:30,558   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt'
2023-12-01T21:52:30,590   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt'
2023-12-01T21:52:30,618   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt'
2023-12-01T21:52:30,666   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt'
2023-12-01T21:52:30,691   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt'
2023-12-01T21:52:30,720   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt'
2023-12-01T21:52:30,723   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt'
2023-12-01T21:52:30,741   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt'
2023-12-01T21:52:30,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt'
2023-12-01T21:52:30,770   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt'
2023-12-01T21:52:30,805   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt'
2023-12-01T21:52:30,822   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt'
2023-12-01T21:52:30,840   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt'
2023-12-01T21:52:30,859   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt'
2023-12-01T21:52:30,878   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt'
2023-12-01T21:52:30,894   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt'
2023-12-01T21:52:30,919   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt'
2023-12-01T21:52:30,932   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt'
2023-12-01T21:52:30,948   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt'
2023-12-01T21:52:30,977   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt'
2023-12-01T21:52:31,020   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt'
2023-12-01T21:52:31,046   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt'
2023-12-01T21:52:31,076   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt'
2023-12-01T21:52:31,108   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt'
2023-12-01T21:52:31,136   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt'
2023-12-01T21:52:31,185   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt'
2023-12-01T21:52:31,210   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt'
2023-12-01T21:52:31,240   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt'
2023-12-01T21:52:31,260   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt'
2023-12-01T21:52:31,264   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt'
2023-12-01T21:52:31,291   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt'
2023-12-01T21:52:31,350   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt'
2023-12-01T21:52:31,374   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt'
2023-12-01T21:52:31,394   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt'
2023-12-01T21:52:31,416   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt'
2023-12-01T21:52:31,438   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt'
2023-12-01T21:52:31,460   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt'
2023-12-01T21:52:31,491   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt'
2023-12-01T21:52:31,505   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt'
2023-12-01T21:52:31,522   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt'
2023-12-01T21:52:31,558   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt'
2023-12-01T21:52:31,626   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt'
2023-12-01T21:52:31,661   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt'
2023-12-01T21:52:31,710   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt'
2023-12-01T21:52:31,756   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt'
2023-12-01T21:52:31,793   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt'
2023-12-01T21:52:31,851   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt'
2023-12-01T21:52:31,883   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt'
2023-12-01T21:52:31,915   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt'
2023-12-01T21:52:31,918   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt'
2023-12-01T21:52:31,944   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt'
2023-12-01T21:52:31,947   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt'
2023-12-01T21:52:31,968   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt'
2023-12-01T21:52:31,976   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt'
2023-12-01T21:52:31,984   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt'
2023-12-01T21:52:31,992   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt'
2023-12-01T21:52:32,000   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt'
2023-12-01T21:52:32,009   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt'
2023-12-01T21:52:32,017   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt'
2023-12-01T21:52:32,025   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt'
2023-12-01T21:52:32,031   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt'
2023-12-01T21:52:32,038   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt'
2023-12-01T21:52:32,074   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt'
2023-12-01T21:52:32,083   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt'
2023-12-01T21:52:32,101   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt'
2023-12-01T21:52:32,123   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt'
2023-12-01T21:52:32,141   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt'
2023-12-01T21:52:32,158   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt'
2023-12-01T21:52:32,170   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt'
2023-12-01T21:52:32,187   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt'
2023-12-01T21:52:32,203   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt'
2023-12-01T21:52:32,214   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt'
2023-12-01T21:52:32,216   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt'
2023-12-01T21:52:32,226   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt'
2023-12-01T21:52:32,228   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt'
2023-12-01T21:52:32,230   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt'
2023-12-01T21:52:32,234   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt'
2023-12-01T21:52:32,241   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt'
2023-12-01T21:52:32,244   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt'
2023-12-01T21:52:32,245   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt'
2023-12-01T21:52:32,247   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt'
2023-12-01T21:52:32,250   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt'
2023-12-01T21:52:32,255   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt'
2023-12-01T21:52:32,257   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt'
2023-12-01T21:52:32,260   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt'
2023-12-01T21:52:32,264   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt'
2023-12-01T21:52:32,269   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt'
2023-12-01T21:52:32,272   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt'
2023-12-01T21:52:32,275   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt'
2023-12-01T21:52:32,279   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt'
2023-12-01T21:52:32,284   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt'
2023-12-01T21:52:32,288   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt'
2023-12-01T21:52:32,290   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py'
2023-12-01T21:52:32,298   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt'
2023-12-01T21:52:32,309   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt'
2023-12-01T21:52:32,318   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt'
2023-12-01T21:52:32,322   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt'
2023-12-01T21:52:32,327   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt'
2023-12-01T21:52:32,331   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt'
2023-12-01T21:52:32,338   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt'
2023-12-01T21:52:32,348   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt'
2023-12-01T21:52:32,351   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt'
2023-12-01T21:52:32,362   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt'
2023-12-01T21:52:32,383   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt'
2023-12-01T21:52:32,388   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt'
2023-12-01T21:52:32,391   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt'
2023-12-01T21:52:32,394   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt'
2023-12-01T21:52:32,407   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt'
2023-12-01T21:52:32,418   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt'
2023-12-01T21:52:32,425   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt'
2023-12-01T21:52:32,433   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt'
2023-12-01T21:52:32,443   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt'
2023-12-01T21:52:32,451   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt'
2023-12-01T21:52:32,458   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt'
2023-12-01T21:52:32,465   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt'
2023-12-01T21:52:32,473   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt'
2023-12-01T21:52:32,475   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt'
2023-12-01T21:52:32,482   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt'
2023-12-01T21:52:32,493   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt'
2023-12-01T21:52:32,502   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt'
2023-12-01T21:52:32,505   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt'
2023-12-01T21:52:32,509   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt'
2023-12-01T21:52:32,514   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt'
2023-12-01T21:52:32,520   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt'
2023-12-01T21:52:32,530   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt'
2023-12-01T21:52:32,532   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt'
2023-12-01T21:52:32,544   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt'
2023-12-01T21:52:32,565   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt'
2023-12-01T21:52:32,569   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt'
2023-12-01T21:52:32,571   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt'
2023-12-01T21:52:32,575   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt'
2023-12-01T21:52:32,587   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt'
2023-12-01T21:52:32,598   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt'
2023-12-01T21:52:32,604   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt'
2023-12-01T21:52:32,613   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt'
2023-12-01T21:52:32,622   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt'
2023-12-01T21:52:32,631   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt'
2023-12-01T21:52:32,637   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt'
2023-12-01T21:52:32,644   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt'
2023-12-01T21:52:32,652   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt'
2023-12-01T21:52:32,653   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt'
2023-12-01T21:52:32,676   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt'
2023-12-01T21:52:32,707   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt'
2023-12-01T21:52:32,737   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt'
2023-12-01T21:52:32,764   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt'
2023-12-01T21:52:32,766   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt'
2023-12-01T21:52:32,815   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt'
2023-12-01T21:52:32,843   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt'
2023-12-01T21:52:32,849   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt'
2023-12-01T21:52:32,854   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt'
2023-12-01T21:52:32,858   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt'
2023-12-01T21:52:32,861   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt'
2023-12-01T21:52:32,864   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt'
2023-12-01T21:52:32,868   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt'
2023-12-01T21:52:32,872   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt'
2023-12-01T21:52:32,876   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt'
2023-12-01T21:52:32,882   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt'
2023-12-01T21:52:32,884   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt'
2023-12-01T21:52:32,896   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt'
2023-12-01T21:52:32,904   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt'
2023-12-01T21:52:32,908   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt'
2023-12-01T21:52:32,910   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt'
2023-12-01T21:52:32,913   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt'
2023-12-01T21:52:32,917   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt'
2023-12-01T21:52:32,920   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt'
2023-12-01T21:52:32,924   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt'
2023-12-01T21:52:32,928   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt'
2023-12-01T21:52:32,931   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt'
2023-12-01T21:52:32,933   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt'
2023-12-01T21:52:32,939   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt'
2023-12-01T21:52:32,943   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt'
2023-12-01T21:52:32,945   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt'
2023-12-01T21:52:32,948   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt'
2023-12-01T21:52:32,950   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt'
2023-12-01T21:52:32,952   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt'
2023-12-01T21:52:32,955   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt'
2023-12-01T21:52:32,957   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt'
2023-12-01T21:52:32,959   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt'
2023-12-01T21:52:32,961   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt'
2023-12-01T21:52:32,965   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt'
2023-12-01T21:52:32,969   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt'
2023-12-01T21:52:32,977   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt'
2023-12-01T21:52:32,985   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt'
2023-12-01T21:52:32,990   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt'
2023-12-01T21:52:32,995   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt'
2023-12-01T21:52:33,005   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt'
2023-12-01T21:52:33,013   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt'
2023-12-01T21:52:33,023   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt'
2023-12-01T21:52:33,037   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt'
2023-12-01T21:52:33,043   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt'
2023-12-01T21:52:33,050   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt'
2023-12-01T21:52:33,058   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt'
2023-12-01T21:52:33,064   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt'
2023-12-01T21:52:33,069   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt'
2023-12-01T21:52:33,078   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt'
2023-12-01T21:52:33,082   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt'
2023-12-01T21:52:33,088   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt'
2023-12-01T21:52:33,100   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt'
2023-12-01T21:52:33,119   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt'
2023-12-01T21:52:33,129   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt'
2023-12-01T21:52:33,143   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt'
2023-12-01T21:52:33,156   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt'
2023-12-01T21:52:33,167   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt'
2023-12-01T21:52:33,187   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt'
2023-12-01T21:52:33,197   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt'
2023-12-01T21:52:33,208   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt'
2023-12-01T21:52:33,217   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt'
2023-12-01T21:52:33,220   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt'
2023-12-01T21:52:33,229   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt'
2023-12-01T21:52:33,244   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt'
2023-12-01T21:52:33,250   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt'
2023-12-01T21:52:33,257   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt'
2023-12-01T21:52:33,264   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt'
2023-12-01T21:52:33,271   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt'
2023-12-01T21:52:33,276   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt'
2023-12-01T21:52:33,285   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt'
2023-12-01T21:52:33,289   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt'
2023-12-01T21:52:33,294   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt'
2023-12-01T21:52:33,306   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt'
2023-12-01T21:52:33,326   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt'
2023-12-01T21:52:33,336   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt'
2023-12-01T21:52:33,349   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt'
2023-12-01T21:52:33,362   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt'
2023-12-01T21:52:33,373   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt'
2023-12-01T21:52:33,393   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt'
2023-12-01T21:52:33,403   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt'
2023-12-01T21:52:33,414   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt'
2023-12-01T21:52:33,423   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt'
2023-12-01T21:52:33,425   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt'
2023-12-01T21:52:33,435   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt'
2023-12-01T21:52:33,450   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt'
2023-12-01T21:52:33,456   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt'
2023-12-01T21:52:33,463   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt'
2023-12-01T21:52:33,470   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt'
2023-12-01T21:52:33,477   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt'
2023-12-01T21:52:33,482   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt'
2023-12-01T21:52:33,492   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt'
2023-12-01T21:52:33,496   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt'
2023-12-01T21:52:33,501   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt'
2023-12-01T21:52:33,514   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt'
2023-12-01T21:52:33,533   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt'
2023-12-01T21:52:33,544   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt'
2023-12-01T21:52:33,558   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt'
2023-12-01T21:52:33,571   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt'
2023-12-01T21:52:33,583   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt'
2023-12-01T21:52:33,604   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt'
2023-12-01T21:52:33,614   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt'
2023-12-01T21:52:33,626   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt'
2023-12-01T21:52:33,634   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt'
2023-12-01T21:52:33,636   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt'
2023-12-01T21:52:33,652   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt'
2023-12-01T21:52:33,657   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt'
2023-12-01T21:52:33,662   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt'
2023-12-01T21:52:33,668   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt'
2023-12-01T21:52:33,673   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt'
2023-12-01T21:52:33,679   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt'
2023-12-01T21:52:33,684   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt'
2023-12-01T21:52:33,689   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt'
2023-12-01T21:52:33,694   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt'
2023-12-01T21:52:33,698   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt'
2023-12-01T21:52:33,731   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt'
2023-12-01T21:52:33,736   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt'
2023-12-01T21:52:33,750   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt'
2023-12-01T21:52:33,769   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt'
2023-12-01T21:52:33,784   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt'
2023-12-01T21:52:33,798   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt'
2023-12-01T21:52:33,807   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt'
2023-12-01T21:52:33,820   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt'
2023-12-01T21:52:33,831   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt'
2023-12-01T21:52:33,839   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt'
2023-12-01T21:52:33,841   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt'
2023-12-01T21:52:33,848   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt'
2023-12-01T21:52:33,850   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt'
2023-12-01T21:52:33,853   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt'
2023-12-01T21:52:33,856   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt'
2023-12-01T21:52:33,862   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt'
2023-12-01T21:52:33,865   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt'
2023-12-01T21:52:33,866   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt'
2023-12-01T21:52:33,869   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt'
2023-12-01T21:52:33,873   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt'
2023-12-01T21:52:33,875   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt'
2023-12-01T21:52:33,877   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt'
2023-12-01T21:52:33,881   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt'
2023-12-01T21:52:33,885   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt'
2023-12-01T21:52:33,888   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt'
2023-12-01T21:52:33,891   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt'
2023-12-01T21:52:33,895   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt'
2023-12-01T21:52:33,899   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt'
2023-12-01T21:52:33,902   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt'
2023-12-01T21:52:34,037   adding 'SigProfilerMatrixGenerator/references/vcf_files/BRCA_example/SNV/BRCA_example_subs_simple.txt'
2023-12-01T21:52:34,053   adding 'SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py'
2023-12-01T21:52:34,064   adding 'SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py'
2023-12-01T21:52:34,071   adding 'SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py'
2023-12-01T21:52:34,076   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py'
2023-12-01T21:52:34,078   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py'
2023-12-01T21:52:34,079   adding 'SigProfilerMatrixGenerator/scripts/__init__.py'
2023-12-01T21:52:34,082   adding 'SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py'
2023-12-01T21:52:34,084   adding 'SigProfilerMatrixGenerator/scripts/ref_install.py'
2023-12-01T21:52:34,086   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_strings.py'
2023-12-01T21:52:34,087   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py'
2023-12-01T21:52:34,090   adding 'SigProfilerMatrixGenerator/scripts/save_context_distribution.py'
2023-12-01T21:52:34,092   adding 'SigProfilerMatrixGenerator/scripts/save_tsb_192.py'
2023-12-01T21:52:34,111   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt'
2023-12-01T21:52:34,113   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt'
2023-12-01T21:52:34,132   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt'
2023-12-01T21:52:34,134   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt'
2023-12-01T21:52:34,135   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py'
2023-12-01T21:52:34,155   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt'
2023-12-01T21:52:34,157   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt'
2023-12-01T21:52:34,176   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt'
2023-12-01T21:52:34,178   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt'
2023-12-01T21:52:34,180   adding 'SigProfilerMatrixGenerator-1.2.20.dist-info/LICENSE'
2023-12-01T21:52:34,183   adding 'SigProfilerMatrixGenerator-1.2.20.dist-info/METADATA'
2023-12-01T21:52:34,184   adding 'SigProfilerMatrixGenerator-1.2.20.dist-info/WHEEL'
2023-12-01T21:52:34,185   adding 'SigProfilerMatrixGenerator-1.2.20.dist-info/entry_points.txt'
2023-12-01T21:52:34,186   adding 'SigProfilerMatrixGenerator-1.2.20.dist-info/top_level.txt'
2023-12-01T21:52:34,202   adding 'SigProfilerMatrixGenerator-1.2.20.dist-info/RECORD'
2023-12-01T21:52:34,645   removing build/bdist.linux-aarch64/wheel
2023-12-01T21:52:35,023   Building wheel for sigprofilermatrixgenerator (setup.py): finished with status 'done'
2023-12-01T21:52:35,356   Created wheel for sigprofilermatrixgenerator: filename=SigProfilerMatrixGenerator-1.2.20-py3-none-any.whl size=39888737 sha256=50879e009a19052a89c6b008d5c88e1c5f62c131709c8d48b44ec36578979d7a
2023-12-01T21:52:35,358   Stored in directory: /tmp/pip-ephem-wheel-cache-ne6dao9r/wheels/da/87/b3/b4bf290f9cab05be5f2352d9c3e473a2da534906814f002eaf
2023-12-01T21:52:35,413 Successfully built sigprofilermatrixgenerator
2023-12-01T21:52:36,365 Removed build tracker: '/tmp/pip-build-tracker-f_05bl23'