2023-12-02T17:15:44,180 Created temporary directory: /tmp/pip-build-tracker-d7t49u16 2023-12-02T17:15:44,181 Initialized build tracking at /tmp/pip-build-tracker-d7t49u16 2023-12-02T17:15:44,182 Created build tracker: /tmp/pip-build-tracker-d7t49u16 2023-12-02T17:15:44,182 Entered build tracker: /tmp/pip-build-tracker-d7t49u16 2023-12-02T17:15:44,183 Created temporary directory: /tmp/pip-wheel-jp_1euv4 2023-12-02T17:15:44,186 Created temporary directory: /tmp/pip-ephem-wheel-cache-qqnq806z 2023-12-02T17:15:44,211 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-02T17:15:44,215 2 location(s) to search for versions of albopictus: 2023-12-02T17:15:44,215 * https://pypi.org/simple/albopictus/ 2023-12-02T17:15:44,215 * https://www.piwheels.org/simple/albopictus/ 2023-12-02T17:15:44,216 Fetching project page and analyzing links: https://pypi.org/simple/albopictus/ 2023-12-02T17:15:44,216 Getting page https://pypi.org/simple/albopictus/ 2023-12-02T17:15:44,218 Found index url https://pypi.org/simple/ 2023-12-02T17:15:44,433 Fetched page https://pypi.org/simple/albopictus/ as application/vnd.pypi.simple.v1+json 2023-12-02T17:15:44,437 Found link https://files.pythonhosted.org/packages/7c/b5/b11d7d1bb2e539c016b989160b925e62dc5368e0834d03e7fc6ba887955d/albopictus-0.2.tar.gz (from https://pypi.org/simple/albopictus/), version: 0.2 2023-12-02T17:15:44,438 Found link https://files.pythonhosted.org/packages/e7/60/f1fd5019adda6edc6daef389e39462f4b426618a214093f4b4508ca74d1c/albopictus-0.3.tar.gz (from https://pypi.org/simple/albopictus/), version: 0.3 2023-12-02T17:15:44,439 Found link https://files.pythonhosted.org/packages/46/73/f3c92afc39e4bf72d48551f870144e95653483018cd492cf7ae1341b3b31/albopictus-0.8.tar.gz (from https://pypi.org/simple/albopictus/), version: 0.8 2023-12-02T17:15:44,439 Found link https://files.pythonhosted.org/packages/8b/e7/b72888c38a783338c4bc8330fb5bb7fe2dd06445f5797e643649aa5d23d9/albopictus-1.0.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.0 2023-12-02T17:15:44,440 Found link https://files.pythonhosted.org/packages/5e/bb/487058f4584be4ed4dd3a16961976b1ed123f1f4c2b86e2fb4ce428a8ccb/albopictus-1.2.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.2 2023-12-02T17:15:44,440 Found link https://files.pythonhosted.org/packages/09/5f/1042ac0ebab211b21f3344e27872d4646782116ec04211e4086d10e5c97c/albopictus-1.6.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.6 2023-12-02T17:15:44,441 Found link https://files.pythonhosted.org/packages/84/9c/16e9fd2affb831ca7ab5df09ea9ab4794eafc6f0da682bb09acf00440978/albopictus-1.8.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.8 2023-12-02T17:15:44,442 Found link https://files.pythonhosted.org/packages/83/a2/5eb0b80fa5940887e40acf3426efc43cbbfa460b69d67aca3910bd5ab017/albopictus-1.8.3.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.8.3 2023-12-02T17:15:44,442 Found link https://files.pythonhosted.org/packages/17/0c/34d307a090fe45cf7aec6f97fc9fffb7f30c31a40bbf499bf95bbef6807d/albopictus-1.9.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.9 2023-12-02T17:15:44,443 Found link https://files.pythonhosted.org/packages/e6/bb/27d133971f0bbf2919b1d2a58c1b0bd3f0f4456a64c77acd3b2725f83a5f/albopictus-1.9.1.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.9.1 2023-12-02T17:15:44,444 Found link https://files.pythonhosted.org/packages/07/7c/c67d36ac5ae4cad27c8f4d0c2c4db9b45a831e73342101b32a09f9c93189/albopictus-1.9.3.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.9.3 2023-12-02T17:15:44,444 Found link https://files.pythonhosted.org/packages/89/f6/cc6c2ca7b751ade0669ffd29186d331d7f958009c83b13b9a4369f1dff6e/albopictus-1.11.0.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.11.0 2023-12-02T17:15:44,445 Found link https://files.pythonhosted.org/packages/d6/5c/873ef51ecde98a70eed4e1ac55f68d62d908a2116a2165a90ddcb7d1d06a/albopictus-1.12.3.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.12.3 2023-12-02T17:15:44,446 Found link https://files.pythonhosted.org/packages/09/74/b42d1cd16c4aece952f014ceeb6a3f822c1f419eeaaa57478e5ee3dd1613/albopictus-1.13.0.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.13.0 2023-12-02T17:15:44,446 Found link https://files.pythonhosted.org/packages/76/b9/80d90f25aa562f2717bc90c6e8682a806eada46fc74561258038f1ab66ec/albopictus-1.14.1.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.14.1 2023-12-02T17:15:44,447 Found link https://files.pythonhosted.org/packages/30/e9/b166b50458aa7fd3697e087bf6efce428a7b140aacd5b1a268c5e1eb5b6c/albopictus-1.15.0.tar.gz (from https://pypi.org/simple/albopictus/), version: 1.15.0 2023-12-02T17:15:44,448 Fetching project page and analyzing links: https://www.piwheels.org/simple/albopictus/ 2023-12-02T17:15:44,449 Getting page https://www.piwheels.org/simple/albopictus/ 2023-12-02T17:15:44,450 Found index url https://www.piwheels.org/simple/ 2023-12-02T17:15:44,615 Fetched page https://www.piwheels.org/simple/albopictus/ as text/html 2023-12-02T17:15:44,620 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.3-cp39-cp39-linux_armv7l.whl#sha256=200ca0f7397fc9c82de040ff0b01d2da2b94d7d1f68764a4ebc866d93a4bdda6 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,620 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.3-cp39-cp39-linux_armv6l.whl#sha256=200ca0f7397fc9c82de040ff0b01d2da2b94d7d1f68764a4ebc866d93a4bdda6 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,621 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.3-cp37-cp37m-linux_armv6l.whl#sha256=3ea460bf0c5b24e2b9320bda6cca005f97b08544a7bdfa188b75ea6210fc14e3 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,621 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.3-cp37-cp37m-linux_armv7l.whl#sha256=3ea460bf0c5b24e2b9320bda6cca005f97b08544a7bdfa188b75ea6210fc14e3 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,622 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.3-cp35-cp35m-linux_armv7l.whl#sha256=4eb0aebac58f5d99e454ccaf77fa8326b0c2ccddeb8d3f650305c8e20991ce51 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,622 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.3-cp35-cp35m-linux_armv6l.whl#sha256=4eb0aebac58f5d99e454ccaf77fa8326b0c2ccddeb8d3f650305c8e20991ce51 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,623 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.3-cp34-cp34m-linux_armv7l.whl#sha256=8c23bb13a1fbdbfeec708150b8e4082e2e24fce8513e219291d6c9303a1076fd (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,623 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.3-cp34-cp34m-linux_armv6l.whl#sha256=8c23bb13a1fbdbfeec708150b8e4082e2e24fce8513e219291d6c9303a1076fd (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,624 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.2-cp39-cp39-linux_armv7l.whl#sha256=889b2fe4358bf0253b9451d59a7e0d1bd4f6913a7efc0f7b054489120f1bea16 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,624 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.2-cp39-cp39-linux_armv6l.whl#sha256=889b2fe4358bf0253b9451d59a7e0d1bd4f6913a7efc0f7b054489120f1bea16 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,625 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.2-cp37-cp37m-linux_armv7l.whl#sha256=0c1599fe923f1dc30dcf325e2823e25cf6ce4064eae582aadd00001a36678e05 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,625 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.2-cp37-cp37m-linux_armv6l.whl#sha256=0c1599fe923f1dc30dcf325e2823e25cf6ce4064eae582aadd00001a36678e05 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,627 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.2-cp34-cp34m-linux_armv7l.whl#sha256=3b4a3087e9d66ac9ea9bd4824bf006dcd07e992762017162b7455a9e68e89e50 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,627 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.2-cp34-cp34m-linux_armv6l.whl#sha256=3b4a3087e9d66ac9ea9bd4824bf006dcd07e992762017162b7455a9e68e89e50 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,628 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.2-cp35-cp35m-linux_armv6l.whl#sha256=2fd2ffab2f16bacd085cf55ff7d661ed6ebac34233d253f58a0a76c07d1debc1 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,628 Skipping link: No binaries permitted for albopictus: https://www.piwheels.org/simple/albopictus/albopictus-0.2-cp35-cp35m-linux_armv7l.whl#sha256=2fd2ffab2f16bacd085cf55ff7d661ed6ebac34233d253f58a0a76c07d1debc1 (from https://www.piwheels.org/simple/albopictus/) 2023-12-02T17:15:44,628 Skipping link: not a file: https://www.piwheels.org/simple/albopictus/ 2023-12-02T17:15:44,629 Skipping link: not a file: https://pypi.org/simple/albopictus/ 2023-12-02T17:15:44,649 Given no hashes to check 1 links for project 'albopictus': discarding no candidates 2023-12-02T17:15:44,667 Collecting albopictus==1.15.0 2023-12-02T17:15:44,669 Created temporary directory: /tmp/pip-unpack-8zxs9e2q 2023-12-02T17:15:44,923 Downloading albopictus-1.15.0.tar.gz (5.7 MB) 2023-12-02T17:15:46,682 Added albopictus==1.15.0 from https://files.pythonhosted.org/packages/30/e9/b166b50458aa7fd3697e087bf6efce428a7b140aacd5b1a268c5e1eb5b6c/albopictus-1.15.0.tar.gz to build tracker '/tmp/pip-build-tracker-d7t49u16' 2023-12-02T17:15:46,684 Running setup.py (path:/tmp/pip-wheel-jp_1euv4/albopictus_a901ce8d7cec4fd3a92793e1f383d78d/setup.py) egg_info for package albopictus 2023-12-02T17:15:46,685 Created temporary directory: /tmp/pip-pip-egg-info-2l24gza8 2023-12-02T17:15:46,686 Preparing metadata (setup.py): started 2023-12-02T17:15:46,687 Running command python setup.py egg_info 2023-12-02T17:15:47,648 /tmp/pip-wheel-jp_1euv4/albopictus_a901ce8d7cec4fd3a92793e1f383d78d/setup.py:3: DeprecationWarning: 2023-12-02T17:15:47,648 `numpy.distutils` is deprecated since NumPy 1.23.0, as a result 2023-12-02T17:15:47,649 of the deprecation of `distutils` itself. It will be removed for 2023-12-02T17:15:47,650 Python >= 3.12. For older Python versions it will remain present. 2023-12-02T17:15:47,650 It is recommended to use `setuptools < 60.0` for those Python versions. 2023-12-02T17:15:47,651 For more details, see: 2023-12-02T17:15:47,651 https://numpy.org/devdocs/reference/distutils_status_migration.html 2023-12-02T17:15:47,653 import numpy.distutils.misc_util 2023-12-02T17:15:48,217 running egg_info 2023-12-02T17:15:48,218 creating /tmp/pip-pip-egg-info-2l24gza8/albopictus.egg-info 2023-12-02T17:15:48,242 writing /tmp/pip-pip-egg-info-2l24gza8/albopictus.egg-info/PKG-INFO 2023-12-02T17:15:48,246 writing dependency_links to /tmp/pip-pip-egg-info-2l24gza8/albopictus.egg-info/dependency_links.txt 2023-12-02T17:15:48,248 writing requirements to /tmp/pip-pip-egg-info-2l24gza8/albopictus.egg-info/requires.txt 2023-12-02T17:15:48,249 writing top-level names to /tmp/pip-pip-egg-info-2l24gza8/albopictus.egg-info/top_level.txt 2023-12-02T17:15:48,250 writing manifest file '/tmp/pip-pip-egg-info-2l24gza8/albopictus.egg-info/SOURCES.txt' 2023-12-02T17:15:48,359 reading manifest file '/tmp/pip-pip-egg-info-2l24gza8/albopictus.egg-info/SOURCES.txt' 2023-12-02T17:15:48,360 reading manifest template 'MANIFEST.in' 2023-12-02T17:15:48,365 adding license file 'LICENSE.txt' 2023-12-02T17:15:48,369 writing manifest file '/tmp/pip-pip-egg-info-2l24gza8/albopictus.egg-info/SOURCES.txt' 2023-12-02T17:15:48,510 Preparing metadata (setup.py): finished with status 'done' 2023-12-02T17:15:48,514 Source in /tmp/pip-wheel-jp_1euv4/albopictus_a901ce8d7cec4fd3a92793e1f383d78d has version 1.15.0, which satisfies requirement albopictus==1.15.0 from https://files.pythonhosted.org/packages/30/e9/b166b50458aa7fd3697e087bf6efce428a7b140aacd5b1a268c5e1eb5b6c/albopictus-1.15.0.tar.gz 2023-12-02T17:15:48,515 Removed albopictus==1.15.0 from https://files.pythonhosted.org/packages/30/e9/b166b50458aa7fd3697e087bf6efce428a7b140aacd5b1a268c5e1eb5b6c/albopictus-1.15.0.tar.gz from build tracker '/tmp/pip-build-tracker-d7t49u16' 2023-12-02T17:15:48,520 Created temporary directory: /tmp/pip-unpack-anfdp86_ 2023-12-02T17:15:48,521 Created temporary directory: /tmp/pip-unpack-xoblum30 2023-12-02T17:15:48,527 Building wheels for collected packages: albopictus 2023-12-02T17:15:48,531 Created temporary directory: /tmp/pip-wheel-5grme2s0 2023-12-02T17:15:48,531 Building wheel for albopictus (setup.py): started 2023-12-02T17:15:48,533 Destination directory: /tmp/pip-wheel-5grme2s0 2023-12-02T17:15:48,533 Running command python setup.py bdist_wheel 2023-12-02T17:15:49,187 /tmp/pip-wheel-jp_1euv4/albopictus_a901ce8d7cec4fd3a92793e1f383d78d/setup.py:3: DeprecationWarning: 2023-12-02T17:15:49,188 `numpy.distutils` is deprecated since NumPy 1.23.0, as a result 2023-12-02T17:15:49,189 of the deprecation of `distutils` itself. It will be removed for 2023-12-02T17:15:49,189 Python >= 3.12. For older Python versions it will remain present. 2023-12-02T17:15:49,190 It is recommended to use `setuptools < 60.0` for those Python versions. 2023-12-02T17:15:49,190 For more details, see: 2023-12-02T17:15:49,191 https://numpy.org/devdocs/reference/distutils_status_migration.html 2023-12-02T17:15:49,192 import numpy.distutils.misc_util 2023-12-02T17:15:49,724 running bdist_wheel 2023-12-02T17:15:49,816 running build 2023-12-02T17:15:49,816 running build_py 2023-12-02T17:15:49,842 creating build 2023-12-02T17:15:49,842 creating build/lib.linux-armv7l-cpython-311 2023-12-02T17:15:49,843 creating build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:49,844 copying src/albopictus/__init__.py -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:49,846 creating build/lib.linux-armv7l-cpython-311/albopictus/readModel 2023-12-02T17:15:49,847 copying src/albopictus/readModel/__init__.py -> build/lib.linux-armv7l-cpython-311/albopictus/readModel 2023-12-02T17:15:49,849 creating build/lib.linux-armv7l-cpython-311/albopictus/setPrior 2023-12-02T17:15:49,850 copying src/albopictus/setPrior/__init__.py -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior 2023-12-02T17:15:49,852 creating build/lib.linux-armv7l-cpython-311/albopictus/plotPos 2023-12-02T17:15:49,853 copying src/albopictus/plotPos/__init__.py -> build/lib.linux-armv7l-cpython-311/albopictus/plotPos 2023-12-02T17:15:49,855 creating build/lib.linux-armv7l-cpython-311/albopictus/accessory 2023-12-02T17:15:49,856 copying src/albopictus/accessory/__init__.py -> build/lib.linux-armv7l-cpython-311/albopictus/accessory 2023-12-02T17:15:49,858 creating build/lib.linux-armv7l-cpython-311/albopictus/population 2023-12-02T17:15:49,858 copying src/albopictus/population/__init__.py -> build/lib.linux-armv7l-cpython-311/albopictus/population 2023-12-02T17:15:49,860 creating build/lib.linux-armv7l-cpython-311/albopictus/dataSurv 2023-12-02T17:15:49,861 copying src/albopictus/dataSurv/__init__.py -> build/lib.linux-armv7l-cpython-311/albopictus/dataSurv 2023-12-02T17:15:49,868 running egg_info 2023-12-02T17:15:49,921 writing src/albopictus.egg-info/PKG-INFO 2023-12-02T17:15:49,924 writing dependency_links to src/albopictus.egg-info/dependency_links.txt 2023-12-02T17:15:49,926 writing requirements to src/albopictus.egg-info/requires.txt 2023-12-02T17:15:49,927 writing top-level names to src/albopictus.egg-info/top_level.txt 2023-12-02T17:15:49,961 reading manifest file 'src/albopictus.egg-info/SOURCES.txt' 2023-12-02T17:15:49,965 reading manifest template 'MANIFEST.in' 2023-12-02T17:15:49,970 adding license file 'LICENSE.txt' 2023-12-02T17:15:49,975 writing manifest file 'src/albopictus.egg-info/SOURCES.txt' 2023-12-02T17:15:49,977 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'albopictus.data' is absent from the `packages` configuration. 2023-12-02T17:15:49,978 !! 2023-12-02T17:15:49,979 ******************************************************************************** 2023-12-02T17:15:49,979 ############################ 2023-12-02T17:15:49,980 # Package would be ignored # 2023-12-02T17:15:49,980 ############################ 2023-12-02T17:15:49,980 Python recognizes 'albopictus.data' as an importable package[^1], 2023-12-02T17:15:49,981 but it is absent from setuptools' `packages` configuration. 2023-12-02T17:15:49,982 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-02T17:15:49,982 package, please make sure that 'albopictus.data' is explicitly added 2023-12-02T17:15:49,983 to the `packages` configuration field. 2023-12-02T17:15:49,983 Alternatively, you can also rely on setuptools' discovery methods 2023-12-02T17:15:49,984 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-02T17:15:49,984 instead of `find_packages(...)`/`find:`). 2023-12-02T17:15:49,985 You can read more about "package discovery" on setuptools documentation page: 2023-12-02T17:15:49,987 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-02T17:15:49,988 If you don't want 'albopictus.data' to be distributed and are 2023-12-02T17:15:49,988 already explicitly excluding 'albopictus.data' via 2023-12-02T17:15:49,989 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-02T17:15:49,989 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-02T17:15:49,990 combination with a more fine grained `package-data` configuration. 2023-12-02T17:15:49,991 You can read more about "package data files" on setuptools documentation page: 2023-12-02T17:15:49,992 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-02T17:15:49,994 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-02T17:15:49,994 even if it does not contain any `.py` files. 2023-12-02T17:15:49,995 On the other hand, currently there is no concept of package data 2023-12-02T17:15:49,996 directory, all directories are treated like packages. 2023-12-02T17:15:49,996 ******************************************************************************** 2023-12-02T17:15:49,998 !! 2023-12-02T17:15:49,998 check.warn(importable) 2023-12-02T17:15:49,999 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'albopictus.setPrior.data' is absent from the `packages` configuration. 2023-12-02T17:15:49,999 !! 2023-12-02T17:15:50,000 ******************************************************************************** 2023-12-02T17:15:50,001 ############################ 2023-12-02T17:15:50,001 # Package would be ignored # 2023-12-02T17:15:50,002 ############################ 2023-12-02T17:15:50,002 Python recognizes 'albopictus.setPrior.data' as an importable package[^1], 2023-12-02T17:15:50,003 but it is absent from setuptools' `packages` configuration. 2023-12-02T17:15:50,004 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-02T17:15:50,005 package, please make sure that 'albopictus.setPrior.data' is explicitly added 2023-12-02T17:15:50,005 to the `packages` configuration field. 2023-12-02T17:15:50,007 Alternatively, you can also rely on setuptools' discovery methods 2023-12-02T17:15:50,007 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-02T17:15:50,007 instead of `find_packages(...)`/`find:`). 2023-12-02T17:15:50,009 You can read more about "package discovery" on setuptools documentation page: 2023-12-02T17:15:50,010 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-02T17:15:50,011 If you don't want 'albopictus.setPrior.data' to be distributed and are 2023-12-02T17:15:50,011 already explicitly excluding 'albopictus.setPrior.data' via 2023-12-02T17:15:50,012 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-02T17:15:50,012 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-02T17:15:50,013 combination with a more fine grained `package-data` configuration. 2023-12-02T17:15:50,014 You can read more about "package data files" on setuptools documentation page: 2023-12-02T17:15:50,015 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-02T17:15:50,016 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-02T17:15:50,017 even if it does not contain any `.py` files. 2023-12-02T17:15:50,017 On the other hand, currently there is no concept of package data 2023-12-02T17:15:50,018 directory, all directories are treated like packages. 2023-12-02T17:15:50,018 ******************************************************************************** 2023-12-02T17:15:50,019 !! 2023-12-02T17:15:50,020 check.warn(importable) 2023-12-02T17:15:50,020 copying src/albopictus/ *Minibuf-1* -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,021 copying src/albopictus/accessory.pyc -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,022 copying src/albopictus/gamma.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,022 copying src/albopictus/gamma.h -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,023 copying src/albopictus/incubator.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,023 copying src/albopictus/incubator.h -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,024 copying src/albopictus/incubator03.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,024 copying src/albopictus/incubator03.h -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,025 copying src/albopictus/modelAalbopictus03.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,025 copying src/albopictus/modelAalbopictus08.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,026 copying src/albopictus/modelAalbopictus08b.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,027 copying src/albopictus/modelAalbopictus08c.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,027 copying src/albopictus/modelAalbopictus13.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,028 copying src/albopictus/modelAalbopictus18.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,028 copying src/albopictus/modelCulex.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,029 copying src/albopictus/modelStochAaegypti.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,030 copying src/albopictus/modelStochAalbopictus.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,031 copying src/albopictus/modelStochCDZ.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,031 copying src/albopictus/modelStochCHIKV.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,034 copying src/albopictus/modelStochSand.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,037 copying src/albopictus/modelStochSand13.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,039 copying src/albopictus/plotPos.pyc -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,041 copying src/albopictus/ran_gen.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,043 copying src/albopictus/ran_gen.h -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,045 copying src/albopictus/setPrior.pyc -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,047 copying src/albopictus/spop.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,049 copying src/albopictus/spop.h -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,051 copying src/albopictus/spop01.c -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,053 copying src/albopictus/spop01.h -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,055 copying src/albopictus/uthash.h -> build/lib.linux-armv7l-cpython-311/albopictus 2023-12-02T17:15:50,058 creating build/lib.linux-armv7l-cpython-311/albopictus/data 2023-12-02T17:15:50,058 copying src/albopictus/data/climate.json -> build/lib.linux-armv7l-cpython-311/albopictus/data 2023-12-02T17:15:50,109 copying src/albopictus/data/posterior.json -> build/lib.linux-armv7l-cpython-311/albopictus/data 2023-12-02T17:15:50,293 copying src/albopictus/data/prior03.json -> build/lib.linux-armv7l-cpython-311/albopictus/data 2023-12-02T17:15:50,295 copying src/albopictus/data/prior08.json -> build/lib.linux-armv7l-cpython-311/albopictus/data 2023-12-02T17:15:50,297 copying src/albopictus/data/prior13.json -> build/lib.linux-armv7l-cpython-311/albopictus/data 2023-12-02T17:15:50,300 copying src/albopictus/data/prior18.json -> build/lib.linux-armv7l-cpython-311/albopictus/data 2023-12-02T17:15:50,302 copying src/albopictus/data/priorAeae.json -> build/lib.linux-armv7l-cpython-311/albopictus/data 2023-12-02T17:15:50,303 copying src/albopictus/data/priorSand.json -> build/lib.linux-armv7l-cpython-311/albopictus/data 2023-12-02T17:15:50,305 creating build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,306 copying src/albopictus/setPrior/data/albopictus_F4_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,308 copying src/albopictus/setPrior/data/albopictus_d1_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,310 copying src/albopictus/setPrior/data/albopictus_d2_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,312 copying src/albopictus/setPrior/data/albopictus_d3_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,313 copying src/albopictus/setPrior/data/albopictus_d4_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,315 copying src/albopictus/setPrior/data/albopictus_gtc_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,317 copying src/albopictus/setPrior/data/albopictus_n23_dev.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,319 copying src/albopictus/setPrior/data/albopictus_n23_surv.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,321 copying src/albopictus/setPrior/data/albopictus_n23_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,323 copying src/albopictus/setPrior/data/albopictus_p0_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,325 copying src/albopictus/setPrior/data/albopictus_p1_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,327 copying src/albopictus/setPrior/data/albopictus_p2_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,329 copying src/albopictus/setPrior/data/albopictus_p3_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,331 copying src/albopictus/setPrior/data/albopictus_tbm_temp.txt -> build/lib.linux-armv7l-cpython-311/albopictus/setPrior/data 2023-12-02T17:15:50,335 running build_ext 2023-12-02T17:15:50,870 building 'albopictus.modelAalbopictus03' extension 2023-12-02T17:15:50,926 Warning: Can't read registry to find the necessary compiler setting 2023-12-02T17:15:50,926 Make sure that Python modules winreg, win32api or win32con are installed. 2023-12-02T17:15:51,116 INFO: C compiler: arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC 2023-12-02T17:15:51,117 creating build/temp.linux-armv7l-cpython-311 2023-12-02T17:15:51,118 creating build/temp.linux-armv7l-cpython-311/src 2023-12-02T17:15:51,118 creating build/temp.linux-armv7l-cpython-311/src/albopictus 2023-12-02T17:15:51,119 INFO: compile options: '-I/usr/local/include -I/usr/include/python3.11 -c' 2023-12-02T17:15:51,127 INFO: arm-linux-gnueabihf-gcc: src/albopictus/incubator03.c 2023-12-02T17:15:51,129 INFO: arm-linux-gnueabihf-gcc: src/albopictus/modelAalbopictus03.c 2023-12-02T17:15:51,771 INFO: arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/albopictus/incubator03.o build/temp.linux-armv7l-cpython-311/src/albopictus/modelAalbopictus03.o -L/usr/local/lib -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lstdc++ -o build/lib.linux-armv7l-cpython-311/albopictus/modelAalbopictus03.cpython-311-arm-linux-gnueabihf.so 2023-12-02T17:15:51,795 /usr/bin/ld: cannot find -lgsl: No such file or directory 2023-12-02T17:15:51,797 /usr/bin/ld: cannot find -lgslcblas: No such file or directory 2023-12-02T17:15:51,859 collect2: error: ld returned 1 exit status 2023-12-02T17:15:51,861 error: Command "arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/albopictus/incubator03.o build/temp.linux-armv7l-cpython-311/src/albopictus/modelAalbopictus03.o -L/usr/local/lib -L/usr/lib/arm-linux-gnueabihf -lgsl -lgslcblas -lstdc++ -o build/lib.linux-armv7l-cpython-311/albopictus/modelAalbopictus03.cpython-311-arm-linux-gnueabihf.so" failed with exit status 1 2023-12-02T17:15:52,056 ERROR: python setup.py bdist_wheel exited with 1 2023-12-02T17:15:52,069 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2023-12-02T17:15:52,069 exec(compile('"'"''"'"''"'"' 2023-12-02T17:15:52,069 # This is -- a caller that pip uses to run setup.py 2023-12-02T17:15:52,069 # 2023-12-02T17:15:52,069 # - It imports setuptools before invoking setup.py, to enable projects that directly 2023-12-02T17:15:52,069 # import from `distutils.core` to work with newer packaging standards. 2023-12-02T17:15:52,069 # - It provides a clear error message when setuptools is not installed. 2023-12-02T17:15:52,069 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2023-12-02T17:15:52,069 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2023-12-02T17:15:52,069 # manifest_maker: standard file '"'"'-c'"'"' not found". 2023-12-02T17:15:52,069 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2023-12-02T17:15:52,069 import os, sys, tokenize 2023-12-02T17:15:52,069 2023-12-02T17:15:52,069 try: 2023-12-02T17:15:52,069 import setuptools 2023-12-02T17:15:52,069 except ImportError as error: 2023-12-02T17:15:52,069 print( 2023-12-02T17:15:52,069 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2023-12-02T17:15:52,069 "the build environment.", 2023-12-02T17:15:52,069 file=sys.stderr, 2023-12-02T17:15:52,069 ) 2023-12-02T17:15:52,069 sys.exit(1) 2023-12-02T17:15:52,069 2023-12-02T17:15:52,069 __file__ = %r 2023-12-02T17:15:52,069 sys.argv[0] = __file__ 2023-12-02T17:15:52,069 2023-12-02T17:15:52,069 if os.path.exists(__file__): 2023-12-02T17:15:52,069 filename = __file__ 2023-12-02T17:15:52,069 with tokenize.open(__file__) as f: 2023-12-02T17:15:52,069 setup_py_code = f.read() 2023-12-02T17:15:52,069 else: 2023-12-02T17:15:52,069 filename = "" 2023-12-02T17:15:52,069 setup_py_code = "from setuptools import setup; setup()" 2023-12-02T17:15:52,069 2023-12-02T17:15:52,069 exec(compile(setup_py_code, filename, "exec")) 2023-12-02T17:15:52,069 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-jp_1euv4/albopictus_a901ce8d7cec4fd3a92793e1f383d78d/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-5grme2s0[/] 2023-12-02T17:15:52,070 [bold magenta]cwd[/]: /tmp/pip-wheel-jp_1euv4/albopictus_a901ce8d7cec4fd3a92793e1f383d78d/ 2023-12-02T17:15:52,071 Building wheel for albopictus (setup.py): finished with status 'error' 2023-12-02T17:15:52,072 ERROR: Failed building wheel for albopictus 2023-12-02T17:15:52,073 Running setup.py clean for albopictus 2023-12-02T17:15:52,074 Running command python setup.py clean 2023-12-02T17:15:52,748 /tmp/pip-wheel-jp_1euv4/albopictus_a901ce8d7cec4fd3a92793e1f383d78d/setup.py:3: DeprecationWarning: 2023-12-02T17:15:52,749 `numpy.distutils` is deprecated since NumPy 1.23.0, as a result 2023-12-02T17:15:52,749 of the deprecation of `distutils` itself. It will be removed for 2023-12-02T17:15:52,750 Python >= 3.12. For older Python versions it will remain present. 2023-12-02T17:15:52,750 It is recommended to use `setuptools < 60.0` for those Python versions. 2023-12-02T17:15:52,751 For more details, see: 2023-12-02T17:15:52,752 https://numpy.org/devdocs/reference/distutils_status_migration.html 2023-12-02T17:15:52,753 import numpy.distutils.misc_util 2023-12-02T17:15:53,291 running clean 2023-12-02T17:15:53,337 removing 'build/temp.linux-armv7l-cpython-311' (and everything under it) 2023-12-02T17:15:53,340 removing 'build/lib.linux-armv7l-cpython-311' (and everything under it) 2023-12-02T17:15:53,368 'build/bdist.linux-armv7l' does not exist -- can't clean it 2023-12-02T17:15:53,368 'build/scripts-3.11' does not exist -- can't clean it 2023-12-02T17:15:53,369 removing 'build' 2023-12-02T17:15:53,506 Failed to build albopictus 2023-12-02T17:15:53,507 ERROR: Failed to build one or more wheels 2023-12-02T17:15:53,509 Exception information: 2023-12-02T17:15:53,509 Traceback (most recent call last): 2023-12-02T17:15:53,509 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-12-02T17:15:53,509 status = run_func(*args) 2023-12-02T17:15:53,509 ^^^^^^^^^^^^^^^ 2023-12-02T17:15:53,509 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 245, in wrapper 2023-12-02T17:15:53,509 return func(self, options, args) 2023-12-02T17:15:53,509 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-02T17:15:53,509 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-12-02T17:15:53,509 raise CommandError("Failed to build one or more wheels") 2023-12-02T17:15:53,509 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-12-02T17:15:53,512 Removed build tracker: '/tmp/pip-build-tracker-d7t49u16'