2023-12-03T05:28:34,244 Created temporary directory: /tmp/pip-build-tracker-62fzykqe
2023-12-03T05:28:34,245 Initialized build tracking at /tmp/pip-build-tracker-62fzykqe
2023-12-03T05:28:34,245 Created build tracker: /tmp/pip-build-tracker-62fzykqe
2023-12-03T05:28:34,246 Entered build tracker: /tmp/pip-build-tracker-62fzykqe
2023-12-03T05:28:34,246 Created temporary directory: /tmp/pip-wheel-pmihsi74
2023-12-03T05:28:34,250 Created temporary directory: /tmp/pip-ephem-wheel-cache-qnq6vhf9
2023-12-03T05:28:34,275 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-03T05:28:34,279 2 location(s) to search for versions of wgs-analysis:
2023-12-03T05:28:34,279 * https://pypi.org/simple/wgs-analysis/
2023-12-03T05:28:34,279 * https://www.piwheels.org/simple/wgs-analysis/
2023-12-03T05:28:34,280 Fetching project page and analyzing links: https://pypi.org/simple/wgs-analysis/
2023-12-03T05:28:34,281 Getting page https://pypi.org/simple/wgs-analysis/
2023-12-03T05:28:34,282 Found index url https://pypi.org/simple/
2023-12-03T05:28:34,421 Fetched page https://pypi.org/simple/wgs-analysis/ as application/vnd.pypi.simple.v1+json
2023-12-03T05:28:34,422   Found link https://files.pythonhosted.org/packages/ea/41/e71b578f8e83982d7807eb45a68c072a55c919b9800542fdff88ee5e5b29/wgs_analysis-0.0.3.tar.gz (from https://pypi.org/simple/wgs-analysis/), version: 0.0.3
2023-12-03T05:28:34,423   Found link https://files.pythonhosted.org/packages/5e/4f/9c5fb434c620bd827da77df5c6fd3464951f6c1b9cb064baa81069dbeb30/wgs_analysis-0.0.4.tar.gz (from https://pypi.org/simple/wgs-analysis/), version: 0.0.4
2023-12-03T05:28:34,424   Found link https://files.pythonhosted.org/packages/ed/34/ebc409184e6fe5e6ef11da4afcb409c6ed8a1e94bbdaf21ae8dd106cc77d/wgs_analysis-0.0.5.tar.gz (from https://pypi.org/simple/wgs-analysis/), version: 0.0.5
2023-12-03T05:28:34,424 Fetching project page and analyzing links: https://www.piwheels.org/simple/wgs-analysis/
2023-12-03T05:28:34,425 Getting page https://www.piwheels.org/simple/wgs-analysis/
2023-12-03T05:28:34,426 Found index url https://www.piwheels.org/simple/
2023-12-03T05:28:34,592 Fetched page https://www.piwheels.org/simple/wgs-analysis/ as text/html
2023-12-03T05:28:34,594   Skipping link: No binaries permitted for wgs-analysis: https://www.piwheels.org/simple/wgs-analysis/wgs_analysis-0.0.4-py3-none-any.whl#sha256=f09cf6243200b0ec3576094096445294c5845778bfcf6c93717e1cd83b8ac53e (from https://www.piwheels.org/simple/wgs-analysis/)
2023-12-03T05:28:34,594   Skipping link: No binaries permitted for wgs-analysis: https://www.piwheels.org/simple/wgs-analysis/wgs_analysis-0.0.3-py3-none-any.whl#sha256=4ac67e1f4ba54135dfcbae668b4d17436fd92a2dd41627f0067d65bffa11f06e (from https://www.piwheels.org/simple/wgs-analysis/)
2023-12-03T05:28:34,595 Skipping link: not a file: https://www.piwheels.org/simple/wgs-analysis/
2023-12-03T05:28:34,596 Skipping link: not a file: https://pypi.org/simple/wgs-analysis/
2023-12-03T05:28:34,615 Given no hashes to check 1 links for project 'wgs-analysis': discarding no candidates
2023-12-03T05:28:34,633 Collecting wgs-analysis==0.0.5
2023-12-03T05:28:34,635   Created temporary directory: /tmp/pip-unpack-glci2lm2
2023-12-03T05:28:34,849   Downloading wgs_analysis-0.0.5.tar.gz (87 kB)
2023-12-03T05:28:35,019   Added wgs-analysis==0.0.5 from https://files.pythonhosted.org/packages/ed/34/ebc409184e6fe5e6ef11da4afcb409c6ed8a1e94bbdaf21ae8dd106cc77d/wgs_analysis-0.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-62fzykqe'
2023-12-03T05:28:35,022   Running setup.py (path:/tmp/pip-wheel-pmihsi74/wgs-analysis_6539d0c9705c4817b7c173d8907eff76/setup.py) egg_info for package wgs-analysis
2023-12-03T05:28:35,022   Created temporary directory: /tmp/pip-pip-egg-info-trzs26sr
2023-12-03T05:28:35,023   Preparing metadata (setup.py): started
2023-12-03T05:28:35,025   Running command python setup.py egg_info
2023-12-03T05:28:36,159   running egg_info
2023-12-03T05:28:36,160   creating /tmp/pip-pip-egg-info-trzs26sr/wgs_analysis.egg-info
2023-12-03T05:28:36,184   writing /tmp/pip-pip-egg-info-trzs26sr/wgs_analysis.egg-info/PKG-INFO
2023-12-03T05:28:36,187   writing dependency_links to /tmp/pip-pip-egg-info-trzs26sr/wgs_analysis.egg-info/dependency_links.txt
2023-12-03T05:28:36,189   writing top-level names to /tmp/pip-pip-egg-info-trzs26sr/wgs_analysis.egg-info/top_level.txt
2023-12-03T05:28:36,191   writing manifest file '/tmp/pip-pip-egg-info-trzs26sr/wgs_analysis.egg-info/SOURCES.txt'
2023-12-03T05:28:36,250   reading manifest file '/tmp/pip-pip-egg-info-trzs26sr/wgs_analysis.egg-info/SOURCES.txt'
2023-12-03T05:28:36,252   reading manifest template 'MANIFEST.in'
2023-12-03T05:28:36,255   writing manifest file '/tmp/pip-pip-egg-info-trzs26sr/wgs_analysis.egg-info/SOURCES.txt'
2023-12-03T05:28:36,361   Preparing metadata (setup.py): finished with status 'done'
2023-12-03T05:28:36,364   Source in /tmp/pip-wheel-pmihsi74/wgs-analysis_6539d0c9705c4817b7c173d8907eff76 has version 0.0.5, which satisfies requirement wgs-analysis==0.0.5 from https://files.pythonhosted.org/packages/ed/34/ebc409184e6fe5e6ef11da4afcb409c6ed8a1e94bbdaf21ae8dd106cc77d/wgs_analysis-0.0.5.tar.gz
2023-12-03T05:28:36,365   Removed wgs-analysis==0.0.5 from https://files.pythonhosted.org/packages/ed/34/ebc409184e6fe5e6ef11da4afcb409c6ed8a1e94bbdaf21ae8dd106cc77d/wgs_analysis-0.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-62fzykqe'
2023-12-03T05:28:36,369 Created temporary directory: /tmp/pip-unpack-veks0vvw
2023-12-03T05:28:36,370 Created temporary directory: /tmp/pip-unpack-lf0gi_9s
2023-12-03T05:28:36,372 Building wheels for collected packages: wgs-analysis
2023-12-03T05:28:36,376   Created temporary directory: /tmp/pip-wheel-ca50_2id
2023-12-03T05:28:36,377   Building wheel for wgs-analysis (setup.py): started
2023-12-03T05:28:36,378   Destination directory: /tmp/pip-wheel-ca50_2id
2023-12-03T05:28:36,379   Running command python setup.py bdist_wheel
2023-12-03T05:28:37,382   running bdist_wheel
2023-12-03T05:28:37,450   running build
2023-12-03T05:28:37,451   running build_py
2023-12-03T05:28:37,455   creating build
2023-12-03T05:28:37,456   creating build/lib
2023-12-03T05:28:37,456   creating build/lib/wgs_analysis
2023-12-03T05:28:37,457   copying wgs_analysis/__init__.py -> build/lib/wgs_analysis
2023-12-03T05:28:37,459   copying wgs_analysis/refgenome.py -> build/lib/wgs_analysis
2023-12-03T05:28:37,461   copying wgs_analysis/_version.py -> build/lib/wgs_analysis
2023-12-03T05:28:37,463   creating build/lib/wgs_analysis/snvs
2023-12-03T05:28:37,464   copying wgs_analysis/snvs/__init__.py -> build/lib/wgs_analysis/snvs
2023-12-03T05:28:37,465   copying wgs_analysis/snvs/mutsig.py -> build/lib/wgs_analysis/snvs
2023-12-03T05:28:37,468   creating build/lib/wgs_analysis/utils
2023-12-03T05:28:37,469   copying wgs_analysis/utils/__init__.py -> build/lib/wgs_analysis/utils
2023-12-03T05:28:37,470   copying wgs_analysis/utils/trees.py -> build/lib/wgs_analysis/utils
2023-12-03T05:28:37,472   creating build/lib/wgs_analysis/tests
2023-12-03T05:28:37,473   copying wgs_analysis/tests/__init__.py -> build/lib/wgs_analysis/tests
2023-12-03T05:28:37,475   copying wgs_analysis/tests/test_breakpoint_db.py -> build/lib/wgs_analysis/tests
2023-12-03T05:28:37,477   creating build/lib/wgs_analysis/tables
2023-12-03T05:28:37,478   copying wgs_analysis/tables/__init__.py -> build/lib/wgs_analysis/tables
2023-12-03T05:28:37,480   copying wgs_analysis/tables/gene_matrix.py -> build/lib/wgs_analysis/tables
2023-12-03T05:28:37,482   copying wgs_analysis/tables/trees.py -> build/lib/wgs_analysis/tables
2023-12-03T05:28:37,484   copying wgs_analysis/tables/clones.py -> build/lib/wgs_analysis/tables
2023-12-03T05:28:37,486   copying wgs_analysis/tables/io.py -> build/lib/wgs_analysis/tables
2023-12-03T05:28:37,488   creating build/lib/wgs_analysis/annotation
2023-12-03T05:28:37,489   copying wgs_analysis/annotation/snv.py -> build/lib/wgs_analysis/annotation
2023-12-03T05:28:37,491   copying wgs_analysis/annotation/cnv.py -> build/lib/wgs_analysis/annotation
2023-12-03T05:28:37,493   copying wgs_analysis/annotation/__init__.py -> build/lib/wgs_analysis/annotation
2023-12-03T05:28:37,495   copying wgs_analysis/annotation/position.py -> build/lib/wgs_analysis/annotation
2023-12-03T05:28:37,497   copying wgs_analysis/annotation/rearrangement.py -> build/lib/wgs_analysis/annotation
2023-12-03T05:28:37,499   creating build/lib/wgs_analysis/experiments
2023-12-03T05:28:37,500   copying wgs_analysis/experiments/design_primers.py -> build/lib/wgs_analysis/experiments
2023-12-03T05:28:37,502   copying wgs_analysis/experiments/__init__.py -> build/lib/wgs_analysis/experiments
2023-12-03T05:28:37,504   copying wgs_analysis/experiments/design_experiment.py -> build/lib/wgs_analysis/experiments
2023-12-03T05:28:37,506   copying wgs_analysis/experiments/design_utils.py -> build/lib/wgs_analysis/experiments
2023-12-03T05:28:37,507   copying wgs_analysis/experiments/blat_server.py -> build/lib/wgs_analysis/experiments
2023-12-03T05:28:37,509   copying wgs_analysis/experiments/design_break_primers.py -> build/lib/wgs_analysis/experiments
2023-12-03T05:28:37,511   copying wgs_analysis/experiments/design_snv_primers.py -> build/lib/wgs_analysis/experiments
2023-12-03T05:28:37,514   creating build/lib/wgs_analysis/algorithms
2023-12-03T05:28:37,514   copying wgs_analysis/algorithms/cnv.py -> build/lib/wgs_analysis/algorithms
2023-12-03T05:28:37,517   copying wgs_analysis/algorithms/__init__.py -> build/lib/wgs_analysis/algorithms
2023-12-03T05:28:37,518   copying wgs_analysis/algorithms/position.py -> build/lib/wgs_analysis/algorithms
2023-12-03T05:28:37,519   copying wgs_analysis/algorithms/merge.py -> build/lib/wgs_analysis/algorithms
2023-12-03T05:28:37,521   copying wgs_analysis/algorithms/rearrangement.py -> build/lib/wgs_analysis/algorithms
2023-12-03T05:28:37,523   copying wgs_analysis/algorithms/tree.py -> build/lib/wgs_analysis/algorithms
2023-12-03T05:28:37,526   creating build/lib/wgs_analysis/plots
2023-12-03T05:28:37,527   copying wgs_analysis/plots/snv.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,529   copying wgs_analysis/plots/cnv.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,532   copying wgs_analysis/plots/heatmap.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,533   copying wgs_analysis/plots/__init__.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,534   copying wgs_analysis/plots/trees.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,536   copying wgs_analysis/plots/utils.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,538   copying wgs_analysis/plots/colors.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,539   copying wgs_analysis/plots/circos.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,542   copying wgs_analysis/plots/clones.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,543   copying wgs_analysis/plots/rearrangement.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,545   copying wgs_analysis/plots/singlecell.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,547   copying wgs_analysis/plots/general.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,549   copying wgs_analysis/plots/positions.py -> build/lib/wgs_analysis/plots
2023-12-03T05:28:37,556   creating build/lib/wgs_analysis/data
2023-12-03T05:28:37,557   copying wgs_analysis/data/signatures_probabilities.tsv -> build/lib/wgs_analysis/data
2023-12-03T05:28:37,560   copying wgs_analysis/data/GRCh37-lite.fa.fai -> build/lib/wgs_analysis/data
2023-12-03T05:28:37,562   copying wgs_analysis/data/GRCh38.fa.fai -> build/lib/wgs_analysis/data
2023-12-03T05:28:37,568   UPDATING build/lib/wgs_analysis/_version.py
2023-12-03T05:28:37,569   set build/lib/wgs_analysis/_version.py to '0.0.5'
2023-12-03T05:28:37,593   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-12-03T05:28:37,594   !!

2023-12-03T05:28:37,595           ********************************************************************************
2023-12-03T05:28:37,596           Please avoid running ``setup.py`` directly.
2023-12-03T05:28:37,596           Instead, use pypa/build, pypa/installer or other
2023-12-03T05:28:37,597           standards-based tools.

2023-12-03T05:28:37,598           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-12-03T05:28:37,599           ********************************************************************************

2023-12-03T05:28:37,600   !!
2023-12-03T05:28:37,600     self.initialize_options()
2023-12-03T05:28:37,619   installing to build/bdist.linux-armv7l/wheel
2023-12-03T05:28:37,619   running install
2023-12-03T05:28:37,642   running install_lib
2023-12-03T05:28:37,665   creating build/bdist.linux-armv7l
2023-12-03T05:28:37,666   creating build/bdist.linux-armv7l/wheel
2023-12-03T05:28:37,667   creating build/bdist.linux-armv7l/wheel/wgs_analysis
2023-12-03T05:28:37,669   creating build/bdist.linux-armv7l/wheel/wgs_analysis/snvs
2023-12-03T05:28:37,670   copying build/lib/wgs_analysis/snvs/__init__.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/snvs
2023-12-03T05:28:37,671   copying build/lib/wgs_analysis/snvs/mutsig.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/snvs
2023-12-03T05:28:37,674   creating build/bdist.linux-armv7l/wheel/wgs_analysis/utils
2023-12-03T05:28:37,675   copying build/lib/wgs_analysis/utils/__init__.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/utils
2023-12-03T05:28:37,676   copying build/lib/wgs_analysis/utils/trees.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/utils
2023-12-03T05:28:37,678   creating build/bdist.linux-armv7l/wheel/wgs_analysis/data
2023-12-03T05:28:37,679   copying build/lib/wgs_analysis/data/signatures_probabilities.tsv -> build/bdist.linux-armv7l/wheel/wgs_analysis/data
2023-12-03T05:28:37,682   copying build/lib/wgs_analysis/data/GRCh37-lite.fa.fai -> build/bdist.linux-armv7l/wheel/wgs_analysis/data
2023-12-03T05:28:37,684   copying build/lib/wgs_analysis/data/GRCh38.fa.fai -> build/bdist.linux-armv7l/wheel/wgs_analysis/data
2023-12-03T05:28:37,685   copying build/lib/wgs_analysis/__init__.py -> build/bdist.linux-armv7l/wheel/wgs_analysis
2023-12-03T05:28:37,687   copying build/lib/wgs_analysis/refgenome.py -> build/bdist.linux-armv7l/wheel/wgs_analysis
2023-12-03T05:28:37,689   creating build/bdist.linux-armv7l/wheel/wgs_analysis/tests
2023-12-03T05:28:37,690   copying build/lib/wgs_analysis/tests/__init__.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/tests
2023-12-03T05:28:37,692   copying build/lib/wgs_analysis/tests/test_breakpoint_db.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/tests
2023-12-03T05:28:37,694   creating build/bdist.linux-armv7l/wheel/wgs_analysis/tables
2023-12-03T05:28:37,695   copying build/lib/wgs_analysis/tables/__init__.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/tables
2023-12-03T05:28:37,697   copying build/lib/wgs_analysis/tables/gene_matrix.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/tables
2023-12-03T05:28:37,699   copying build/lib/wgs_analysis/tables/trees.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/tables
2023-12-03T05:28:37,701   copying build/lib/wgs_analysis/tables/clones.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/tables
2023-12-03T05:28:37,703   copying build/lib/wgs_analysis/tables/io.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/tables
2023-12-03T05:28:37,705   copying build/lib/wgs_analysis/_version.py -> build/bdist.linux-armv7l/wheel/wgs_analysis
2023-12-03T05:28:37,707   creating build/bdist.linux-armv7l/wheel/wgs_analysis/annotation
2023-12-03T05:28:37,708   copying build/lib/wgs_analysis/annotation/snv.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/annotation
2023-12-03T05:28:37,710   copying build/lib/wgs_analysis/annotation/cnv.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/annotation
2023-12-03T05:28:37,713   copying build/lib/wgs_analysis/annotation/__init__.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/annotation
2023-12-03T05:28:37,714   copying build/lib/wgs_analysis/annotation/position.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/annotation
2023-12-03T05:28:37,716   copying build/lib/wgs_analysis/annotation/rearrangement.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/annotation
2023-12-03T05:28:37,719   creating build/bdist.linux-armv7l/wheel/wgs_analysis/experiments
2023-12-03T05:28:37,720   copying build/lib/wgs_analysis/experiments/design_primers.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/experiments
2023-12-03T05:28:37,722   copying build/lib/wgs_analysis/experiments/__init__.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/experiments
2023-12-03T05:28:37,723   copying build/lib/wgs_analysis/experiments/design_experiment.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/experiments
2023-12-03T05:28:37,726   copying build/lib/wgs_analysis/experiments/design_utils.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/experiments
2023-12-03T05:28:37,727   copying build/lib/wgs_analysis/experiments/blat_server.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/experiments
2023-12-03T05:28:37,729   copying build/lib/wgs_analysis/experiments/design_break_primers.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/experiments
2023-12-03T05:28:37,731   copying build/lib/wgs_analysis/experiments/design_snv_primers.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/experiments
2023-12-03T05:28:37,734   creating build/bdist.linux-armv7l/wheel/wgs_analysis/algorithms
2023-12-03T05:28:37,735   copying build/lib/wgs_analysis/algorithms/cnv.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/algorithms
2023-12-03T05:28:37,737   copying build/lib/wgs_analysis/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/algorithms
2023-12-03T05:28:37,738   copying build/lib/wgs_analysis/algorithms/position.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/algorithms
2023-12-03T05:28:37,740   copying build/lib/wgs_analysis/algorithms/merge.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/algorithms
2023-12-03T05:28:37,742   copying build/lib/wgs_analysis/algorithms/rearrangement.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/algorithms
2023-12-03T05:28:37,744   copying build/lib/wgs_analysis/algorithms/tree.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/algorithms
2023-12-03T05:28:37,746   creating build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,747   copying build/lib/wgs_analysis/plots/snv.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,750   copying build/lib/wgs_analysis/plots/cnv.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,752   copying build/lib/wgs_analysis/plots/heatmap.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,754   copying build/lib/wgs_analysis/plots/__init__.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,756   copying build/lib/wgs_analysis/plots/trees.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,758   copying build/lib/wgs_analysis/plots/utils.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,760   copying build/lib/wgs_analysis/plots/colors.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,762   copying build/lib/wgs_analysis/plots/circos.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,764   copying build/lib/wgs_analysis/plots/clones.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,766   copying build/lib/wgs_analysis/plots/rearrangement.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,768   copying build/lib/wgs_analysis/plots/singlecell.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,771   copying build/lib/wgs_analysis/plots/general.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,773   copying build/lib/wgs_analysis/plots/positions.py -> build/bdist.linux-armv7l/wheel/wgs_analysis/plots
2023-12-03T05:28:37,774   running install_egg_info
2023-12-03T05:28:37,834   running egg_info
2023-12-03T05:28:37,858   writing wgs_analysis.egg-info/PKG-INFO
2023-12-03T05:28:37,861   writing dependency_links to wgs_analysis.egg-info/dependency_links.txt
2023-12-03T05:28:37,863   writing top-level names to wgs_analysis.egg-info/top_level.txt
2023-12-03T05:28:37,896   reading manifest file 'wgs_analysis.egg-info/SOURCES.txt'
2023-12-03T05:28:37,899   reading manifest template 'MANIFEST.in'
2023-12-03T05:28:37,903   writing manifest file 'wgs_analysis.egg-info/SOURCES.txt'
2023-12-03T05:28:37,905   Copying wgs_analysis.egg-info to build/bdist.linux-armv7l/wheel/wgs_analysis-0.0.5-py3.11.egg-info
2023-12-03T05:28:37,913   running install_scripts
2023-12-03T05:28:37,921   creating build/bdist.linux-armv7l/wheel/wgs_analysis-0.0.5.dist-info/WHEEL
2023-12-03T05:28:37,923   creating '/tmp/pip-wheel-ca50_2id/wgs_analysis-0.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-12-03T05:28:37,925   adding 'wgs_analysis/__init__.py'
2023-12-03T05:28:37,927   adding 'wgs_analysis/_version.py'
2023-12-03T05:28:37,928   adding 'wgs_analysis/refgenome.py'
2023-12-03T05:28:37,930   adding 'wgs_analysis/algorithms/__init__.py'
2023-12-03T05:28:37,931   adding 'wgs_analysis/algorithms/cnv.py'
2023-12-03T05:28:37,933   adding 'wgs_analysis/algorithms/merge.py'
2023-12-03T05:28:37,934   adding 'wgs_analysis/algorithms/position.py'
2023-12-03T05:28:37,935   adding 'wgs_analysis/algorithms/rearrangement.py'
2023-12-03T05:28:37,937   adding 'wgs_analysis/algorithms/tree.py'
2023-12-03T05:28:37,939   adding 'wgs_analysis/annotation/__init__.py'
2023-12-03T05:28:37,940   adding 'wgs_analysis/annotation/cnv.py'
2023-12-03T05:28:37,941   adding 'wgs_analysis/annotation/position.py'
2023-12-03T05:28:37,943   adding 'wgs_analysis/annotation/rearrangement.py'
2023-12-03T05:28:37,944   adding 'wgs_analysis/annotation/snv.py'
2023-12-03T05:28:37,946   adding 'wgs_analysis/data/GRCh37-lite.fa.fai'
2023-12-03T05:28:37,947   adding 'wgs_analysis/data/GRCh38.fa.fai'
2023-12-03T05:28:37,954   adding 'wgs_analysis/data/signatures_probabilities.tsv'
2023-12-03T05:28:37,956   adding 'wgs_analysis/experiments/__init__.py'
2023-12-03T05:28:37,957   adding 'wgs_analysis/experiments/blat_server.py'
2023-12-03T05:28:37,959   adding 'wgs_analysis/experiments/design_break_primers.py'
2023-12-03T05:28:37,961   adding 'wgs_analysis/experiments/design_experiment.py'
2023-12-03T05:28:37,963   adding 'wgs_analysis/experiments/design_primers.py'
2023-12-03T05:28:37,964   adding 'wgs_analysis/experiments/design_snv_primers.py'
2023-12-03T05:28:37,965   adding 'wgs_analysis/experiments/design_utils.py'
2023-12-03T05:28:37,967   adding 'wgs_analysis/plots/__init__.py'
2023-12-03T05:28:37,969   adding 'wgs_analysis/plots/circos.py'
2023-12-03T05:28:37,970   adding 'wgs_analysis/plots/clones.py'
2023-12-03T05:28:37,973   adding 'wgs_analysis/plots/cnv.py'
2023-12-03T05:28:37,975   adding 'wgs_analysis/plots/colors.py'
2023-12-03T05:28:37,976   adding 'wgs_analysis/plots/general.py'
2023-12-03T05:28:37,977   adding 'wgs_analysis/plots/heatmap.py'
2023-12-03T05:28:37,978   adding 'wgs_analysis/plots/positions.py'
2023-12-03T05:28:37,981   adding 'wgs_analysis/plots/rearrangement.py'
2023-12-03T05:28:37,983   adding 'wgs_analysis/plots/singlecell.py'
2023-12-03T05:28:37,984   adding 'wgs_analysis/plots/snv.py'
2023-12-03T05:28:37,986   adding 'wgs_analysis/plots/trees.py'
2023-12-03T05:28:37,987   adding 'wgs_analysis/plots/utils.py'
2023-12-03T05:28:37,989   adding 'wgs_analysis/snvs/__init__.py'
2023-12-03T05:28:37,991   adding 'wgs_analysis/snvs/mutsig.py'
2023-12-03T05:28:37,993   adding 'wgs_analysis/tables/__init__.py'
2023-12-03T05:28:37,995   adding 'wgs_analysis/tables/clones.py'
2023-12-03T05:28:37,996   adding 'wgs_analysis/tables/gene_matrix.py'
2023-12-03T05:28:37,998   adding 'wgs_analysis/tables/io.py'
2023-12-03T05:28:38,000   adding 'wgs_analysis/tables/trees.py'
2023-12-03T05:28:38,002   adding 'wgs_analysis/tests/__init__.py'
2023-12-03T05:28:38,003   adding 'wgs_analysis/tests/test_breakpoint_db.py'
2023-12-03T05:28:38,005   adding 'wgs_analysis/utils/__init__.py'
2023-12-03T05:28:38,006   adding 'wgs_analysis/utils/trees.py'
2023-12-03T05:28:38,008   adding 'wgs_analysis-0.0.5.dist-info/METADATA'
2023-12-03T05:28:38,009   adding 'wgs_analysis-0.0.5.dist-info/WHEEL'
2023-12-03T05:28:38,010   adding 'wgs_analysis-0.0.5.dist-info/top_level.txt'
2023-12-03T05:28:38,011   adding 'wgs_analysis-0.0.5.dist-info/RECORD'
2023-12-03T05:28:38,013   removing build/bdist.linux-armv7l/wheel
2023-12-03T05:28:38,135   Building wheel for wgs-analysis (setup.py): finished with status 'done'
2023-12-03T05:28:38,138   Created wheel for wgs-analysis: filename=wgs_analysis-0.0.5-py3-none-any.whl size=84351 sha256=1e3d9db0b923ec19958bc3323e01451d5df339a188209616ea356719dacae254
2023-12-03T05:28:38,140   Stored in directory: /tmp/pip-ephem-wheel-cache-qnq6vhf9/wheels/a1/04/1d/6ba6c3c95a360146646efb899009ef4c8bdb5ee6dcab808739
2023-12-03T05:28:38,150 Successfully built wgs-analysis
2023-12-03T05:28:38,156 Removed build tracker: '/tmp/pip-build-tracker-62fzykqe'