2023-12-05T02:55:03,589 Created temporary directory: /tmp/pip-build-tracker-9bk7vwx1 2023-12-05T02:55:03,590 Initialized build tracking at /tmp/pip-build-tracker-9bk7vwx1 2023-12-05T02:55:03,590 Created build tracker: /tmp/pip-build-tracker-9bk7vwx1 2023-12-05T02:55:03,591 Entered build tracker: /tmp/pip-build-tracker-9bk7vwx1 2023-12-05T02:55:03,592 Created temporary directory: /tmp/pip-wheel-e_mfve68 2023-12-05T02:55:03,595 Created temporary directory: /tmp/pip-ephem-wheel-cache-gten8cka 2023-12-05T02:55:03,617 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-05T02:55:03,621 2 location(s) to search for versions of macrel: 2023-12-05T02:55:03,621 * https://pypi.org/simple/macrel/ 2023-12-05T02:55:03,621 * https://www.piwheels.org/simple/macrel/ 2023-12-05T02:55:03,622 Fetching project page and analyzing links: https://pypi.org/simple/macrel/ 2023-12-05T02:55:03,622 Getting page https://pypi.org/simple/macrel/ 2023-12-05T02:55:03,624 Found index url https://pypi.org/simple/ 2023-12-05T02:55:03,838 Fetched page https://pypi.org/simple/macrel/ as application/vnd.pypi.simple.v1+json 2023-12-05T02:55:03,841 Found link https://files.pythonhosted.org/packages/f1/f8/6b78e3f3c63fef49c5c3e4c0d2f2304e7ad7ceef11aa92888a96a9a9d9f7/macrel-0.4.0.tar.gz (from https://pypi.org/simple/macrel/), version: 0.4.0 2023-12-05T02:55:03,842 Found link https://files.pythonhosted.org/packages/73/8a/7e35ed92e3930c06fcf84c4237a58035ce40825e9a007befb973a3363818/macrel-0.6.0.tar.gz (from https://pypi.org/simple/macrel/), version: 0.6.0 2023-12-05T02:55:03,842 Found link https://files.pythonhosted.org/packages/1f/e6/84c10c618a31649b316ebf66d061284dfad74a2e6f5490f6b4b73eecc116/macrel-0.6.1.tar.gz (from https://pypi.org/simple/macrel/), version: 0.6.1 2023-12-05T02:55:03,843 Found link https://files.pythonhosted.org/packages/47/87/37920928f4052b8bd2fe92f4d584c4543a9cd844c36408f865b6d67f96d1/macrel-1.1.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.1.0 2023-12-05T02:55:03,843 Found link https://files.pythonhosted.org/packages/dd/40/319ac423a1c8c22fcd9512d8d8726c037edf50b0e5859e04e1ae66b145d6/macrel-1.2.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.2.0 2023-12-05T02:55:03,844 Skipping link: No binaries permitted for macrel: https://files.pythonhosted.org/packages/42/a7/d72533a839ef768152648c6cff1ad02cb8e0aa2baa682875543822838f34/macrel-1.3.0-py3-none-any.whl (from https://pypi.org/simple/macrel/) 2023-12-05T02:55:03,845 Found link https://files.pythonhosted.org/packages/1f/cc/c32b86a422707fb71089c74b3babb194e7eaf7917ce4fde98241ffdaf3b1/macrel-1.3.0.tar.gz (from https://pypi.org/simple/macrel/), version: 1.3.0 2023-12-05T02:55:03,845 Fetching project page and analyzing links: https://www.piwheels.org/simple/macrel/ 2023-12-05T02:55:03,846 Getting page https://www.piwheels.org/simple/macrel/ 2023-12-05T02:55:03,848 Found index url https://www.piwheels.org/simple/ 2023-12-05T02:55:04,002 Fetched page https://www.piwheels.org/simple/macrel/ as text/html 2023-12-05T02:55:04,005 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-1.2.0-py3-none-any.whl#sha256=48576d924f0180b1aee773e684176977dbcb27b61842fd1b008eb078ae300c6e (from https://www.piwheels.org/simple/macrel/) 2023-12-05T02:55:04,005 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-1.1.0-py3-none-any.whl#sha256=5c1275c71873a16760d47f10592fead14821308943c6e2581e2f57f3431a9cf8 (from https://www.piwheels.org/simple/macrel/) 2023-12-05T02:55:04,006 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-0.6.1-py3-none-any.whl#sha256=def298757487ee73cfb70f4d411ad41e4e1ecbe5abecb1b5fca9019cc04440fe (from https://www.piwheels.org/simple/macrel/) 2023-12-05T02:55:04,006 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-0.6.0-py3-none-any.whl#sha256=7ece8510e875f47b331d420a802d239846a2f7703367e550fa0294ddab6fabb8 (from https://www.piwheels.org/simple/macrel/) 2023-12-05T02:55:04,007 Skipping link: No binaries permitted for macrel: https://www.piwheels.org/simple/macrel/macrel-0.4.0-py3-none-any.whl#sha256=3dcc85ce084d596da3b8264c7c44330a4e11a51dc763cbd0c6b9362dcde9f1b6 (from https://www.piwheels.org/simple/macrel/) 2023-12-05T02:55:04,008 Skipping link: not a file: https://www.piwheels.org/simple/macrel/ 2023-12-05T02:55:04,009 Skipping link: not a file: https://pypi.org/simple/macrel/ 2023-12-05T02:55:04,028 Given no hashes to check 1 links for project 'macrel': discarding no candidates 2023-12-05T02:55:04,046 Collecting macrel==1.3.0 2023-12-05T02:55:04,048 Created temporary directory: /tmp/pip-unpack-xyasyadd 2023-12-05T02:55:04,265 Downloading macrel-1.3.0.tar.gz (4.7 MB) 2023-12-05T02:55:05,210 Added macrel==1.3.0 from https://files.pythonhosted.org/packages/1f/cc/c32b86a422707fb71089c74b3babb194e7eaf7917ce4fde98241ffdaf3b1/macrel-1.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-9bk7vwx1' 2023-12-05T02:55:05,212 Running setup.py (path:/tmp/pip-wheel-e_mfve68/macrel_9ae0f54e087e41c0a81226091bbfabf5/setup.py) egg_info for package macrel 2023-12-05T02:55:05,213 Created temporary directory: /tmp/pip-pip-egg-info-1jp5b_9u 2023-12-05T02:55:05,214 Preparing metadata (setup.py): started 2023-12-05T02:55:05,215 Running command python setup.py egg_info 2023-12-05T02:55:06,249 running egg_info 2023-12-05T02:55:06,251 creating /tmp/pip-pip-egg-info-1jp5b_9u/macrel.egg-info 2023-12-05T02:55:06,276 writing /tmp/pip-pip-egg-info-1jp5b_9u/macrel.egg-info/PKG-INFO 2023-12-05T02:55:06,279 writing dependency_links to /tmp/pip-pip-egg-info-1jp5b_9u/macrel.egg-info/dependency_links.txt 2023-12-05T02:55:06,281 writing entry points to /tmp/pip-pip-egg-info-1jp5b_9u/macrel.egg-info/entry_points.txt 2023-12-05T02:55:06,282 writing requirements to /tmp/pip-pip-egg-info-1jp5b_9u/macrel.egg-info/requires.txt 2023-12-05T02:55:06,283 writing top-level names to /tmp/pip-pip-egg-info-1jp5b_9u/macrel.egg-info/top_level.txt 2023-12-05T02:55:06,285 writing manifest file '/tmp/pip-pip-egg-info-1jp5b_9u/macrel.egg-info/SOURCES.txt' 2023-12-05T02:55:06,366 reading manifest file '/tmp/pip-pip-egg-info-1jp5b_9u/macrel.egg-info/SOURCES.txt' 2023-12-05T02:55:06,367 reading manifest template 'MANIFEST.in' 2023-12-05T02:55:06,369 warning: no files found matching 'macrel/data/*' 2023-12-05T02:55:06,369 adding license file 'LICENSE' 2023-12-05T02:55:06,372 writing manifest file '/tmp/pip-pip-egg-info-1jp5b_9u/macrel.egg-info/SOURCES.txt' 2023-12-05T02:55:06,476 Preparing metadata (setup.py): finished with status 'done' 2023-12-05T02:55:06,481 Source in /tmp/pip-wheel-e_mfve68/macrel_9ae0f54e087e41c0a81226091bbfabf5 has version 1.3.0, which satisfies requirement macrel==1.3.0 from https://files.pythonhosted.org/packages/1f/cc/c32b86a422707fb71089c74b3babb194e7eaf7917ce4fde98241ffdaf3b1/macrel-1.3.0.tar.gz 2023-12-05T02:55:06,482 Removed macrel==1.3.0 from https://files.pythonhosted.org/packages/1f/cc/c32b86a422707fb71089c74b3babb194e7eaf7917ce4fde98241ffdaf3b1/macrel-1.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-9bk7vwx1' 2023-12-05T02:55:06,487 Created temporary directory: /tmp/pip-unpack-0p87wka0 2023-12-05T02:55:06,488 Created temporary directory: /tmp/pip-unpack-8xrle9pv 2023-12-05T02:55:06,495 Building wheels for collected packages: macrel 2023-12-05T02:55:06,499 Created temporary directory: /tmp/pip-wheel-qp84jrey 2023-12-05T02:55:06,500 Building wheel for macrel (setup.py): started 2023-12-05T02:55:06,501 Destination directory: /tmp/pip-wheel-qp84jrey 2023-12-05T02:55:06,502 Running command python setup.py bdist_wheel 2023-12-05T02:55:07,489 running bdist_wheel 2023-12-05T02:55:07,586 running build 2023-12-05T02:55:07,587 running build_py 2023-12-05T02:55:07,614 creating build 2023-12-05T02:55:07,614 creating build/lib 2023-12-05T02:55:07,615 creating build/lib/macrel 2023-12-05T02:55:07,616 copying macrel/AMP_predict.py -> build/lib/macrel 2023-12-05T02:55:07,619 copying macrel/ORFs_prediction.py -> build/lib/macrel 2023-12-05T02:55:07,621 copying macrel/database.py -> build/lib/macrel 2023-12-05T02:55:07,623 copying macrel/filter_smorfs.py -> build/lib/macrel 2023-12-05T02:55:07,625 copying macrel/main.py -> build/lib/macrel 2023-12-05T02:55:07,628 copying macrel/fasta.py -> build/lib/macrel 2023-12-05T02:55:07,629 copying macrel/AMP_features.py -> build/lib/macrel 2023-12-05T02:55:07,631 copying macrel/macrel_features.py -> build/lib/macrel 2023-12-05T02:55:07,633 copying macrel/__init__.py -> build/lib/macrel 2023-12-05T02:55:07,634 copying macrel/output.py -> build/lib/macrel 2023-12-05T02:55:07,636 copying macrel/macrel_version.py -> build/lib/macrel 2023-12-05T02:55:07,637 copying macrel/utils.py -> build/lib/macrel 2023-12-05T02:55:07,640 creating build/lib/macrel/tests 2023-12-05T02:55:07,640 copying macrel/tests/test_features.py -> build/lib/macrel/tests 2023-12-05T02:55:07,642 copying macrel/tests/__init__.py -> build/lib/macrel/tests 2023-12-05T02:55:07,644 copying macrel/tests/test_predict.py -> build/lib/macrel/tests 2023-12-05T02:55:07,648 creating build/lib/macrel/data 2023-12-05T02:55:07,649 creating build/lib/macrel/data/scripts 2023-12-05T02:55:07,650 copying macrel/data/scripts/count.ngl -> build/lib/macrel/data/scripts 2023-12-05T02:55:07,652 copying macrel/data/scripts/trim.pe.ngl -> build/lib/macrel/data/scripts 2023-12-05T02:55:07,654 copying macrel/data/scripts/trim.se.ngl -> build/lib/macrel/data/scripts 2023-12-05T02:55:07,656 creating build/lib/macrel/data/models 2023-12-05T02:55:07,656 copying macrel/data/models/AMP.pkl.gz -> build/lib/macrel/data/models 2023-12-05T02:55:07,723 copying macrel/data/models/Hemo.pkl.gz -> build/lib/macrel/data/models 2023-12-05T02:55:07,753 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-12-05T02:55:07,754 !! 2023-12-05T02:55:07,755 ******************************************************************************** 2023-12-05T02:55:07,756 Please avoid running ``setup.py`` directly. 2023-12-05T02:55:07,756 Instead, use pypa/build, pypa/installer or other 2023-12-05T02:55:07,757 standards-based tools. 2023-12-05T02:55:07,758 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-12-05T02:55:07,758 ******************************************************************************** 2023-12-05T02:55:07,759 !! 2023-12-05T02:55:07,760 self.initialize_options() 2023-12-05T02:55:07,778 installing to build/bdist.linux-armv7l/wheel 2023-12-05T02:55:07,778 running install 2023-12-05T02:55:07,802 running install_lib 2023-12-05T02:55:07,826 creating build/bdist.linux-armv7l 2023-12-05T02:55:07,827 creating build/bdist.linux-armv7l/wheel 2023-12-05T02:55:07,829 creating build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,830 copying build/lib/macrel/AMP_predict.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,833 creating build/bdist.linux-armv7l/wheel/macrel/tests 2023-12-05T02:55:07,834 copying build/lib/macrel/tests/test_features.py -> build/bdist.linux-armv7l/wheel/macrel/tests 2023-12-05T02:55:07,836 copying build/lib/macrel/tests/__init__.py -> build/bdist.linux-armv7l/wheel/macrel/tests 2023-12-05T02:55:07,838 copying build/lib/macrel/tests/test_predict.py -> build/bdist.linux-armv7l/wheel/macrel/tests 2023-12-05T02:55:07,840 copying build/lib/macrel/ORFs_prediction.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,842 copying build/lib/macrel/database.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,844 copying build/lib/macrel/filter_smorfs.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,845 copying build/lib/macrel/main.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,848 copying build/lib/macrel/fasta.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,850 copying build/lib/macrel/AMP_features.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,852 copying build/lib/macrel/macrel_features.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,854 copying build/lib/macrel/__init__.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,856 copying build/lib/macrel/output.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,859 copying build/lib/macrel/macrel_version.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,860 copying build/lib/macrel/utils.py -> build/bdist.linux-armv7l/wheel/macrel 2023-12-05T02:55:07,862 creating build/bdist.linux-armv7l/wheel/macrel/data 2023-12-05T02:55:07,863 creating build/bdist.linux-armv7l/wheel/macrel/data/scripts 2023-12-05T02:55:07,864 copying build/lib/macrel/data/scripts/count.ngl -> build/bdist.linux-armv7l/wheel/macrel/data/scripts 2023-12-05T02:55:07,866 copying build/lib/macrel/data/scripts/trim.pe.ngl -> build/bdist.linux-armv7l/wheel/macrel/data/scripts 2023-12-05T02:55:07,868 copying build/lib/macrel/data/scripts/trim.se.ngl -> build/bdist.linux-armv7l/wheel/macrel/data/scripts 2023-12-05T02:55:07,870 creating build/bdist.linux-armv7l/wheel/macrel/data/models 2023-12-05T02:55:07,871 copying build/lib/macrel/data/models/AMP.pkl.gz -> build/bdist.linux-armv7l/wheel/macrel/data/models 2023-12-05T02:55:07,937 copying build/lib/macrel/data/models/Hemo.pkl.gz -> build/bdist.linux-armv7l/wheel/macrel/data/models 2023-12-05T02:55:07,942 running install_egg_info 2023-12-05T02:55:08,003 running egg_info 2023-12-05T02:55:08,028 writing macrel.egg-info/PKG-INFO 2023-12-05T02:55:08,032 writing dependency_links to macrel.egg-info/dependency_links.txt 2023-12-05T02:55:08,034 writing entry points to macrel.egg-info/entry_points.txt 2023-12-05T02:55:08,035 writing requirements to macrel.egg-info/requires.txt 2023-12-05T02:55:08,037 writing top-level names to macrel.egg-info/top_level.txt 2023-12-05T02:55:08,067 reading manifest file 'macrel.egg-info/SOURCES.txt' 2023-12-05T02:55:08,070 reading manifest template 'MANIFEST.in' 2023-12-05T02:55:08,072 warning: no files found matching 'macrel/data/*' 2023-12-05T02:55:08,073 adding license file 'LICENSE' 2023-12-05T02:55:08,076 writing manifest file 'macrel.egg-info/SOURCES.txt' 2023-12-05T02:55:08,078 Copying macrel.egg-info to build/bdist.linux-armv7l/wheel/macrel-1.3.0-py3.11.egg-info 2023-12-05T02:55:08,092 running install_scripts 2023-12-05T02:55:08,109 creating build/bdist.linux-armv7l/wheel/macrel-1.3.0.dist-info/WHEEL 2023-12-05T02:55:08,112 creating '/tmp/pip-wheel-qp84jrey/macrel-1.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-05T02:55:08,115 adding 'macrel/AMP_features.py' 2023-12-05T02:55:08,117 adding 'macrel/AMP_predict.py' 2023-12-05T02:55:08,118 adding 'macrel/ORFs_prediction.py' 2023-12-05T02:55:08,120 adding 'macrel/__init__.py' 2023-12-05T02:55:08,122 adding 'macrel/database.py' 2023-12-05T02:55:08,124 adding 'macrel/fasta.py' 2023-12-05T02:55:08,125 adding 'macrel/filter_smorfs.py' 2023-12-05T02:55:08,127 adding 'macrel/macrel_features.py' 2023-12-05T02:55:08,128 adding 'macrel/macrel_version.py' 2023-12-05T02:55:08,131 adding 'macrel/main.py' 2023-12-05T02:55:08,133 adding 'macrel/output.py' 2023-12-05T02:55:08,134 adding 'macrel/utils.py' 2023-12-05T02:55:08,723 adding 'macrel/data/models/AMP.pkl.gz' 2023-12-05T02:55:08,770 adding 'macrel/data/models/Hemo.pkl.gz' 2023-12-05T02:55:08,773 adding 'macrel/data/scripts/count.ngl' 2023-12-05T02:55:08,774 adding 'macrel/data/scripts/trim.pe.ngl' 2023-12-05T02:55:08,775 adding 'macrel/data/scripts/trim.se.ngl' 2023-12-05T02:55:08,777 adding 'macrel/tests/__init__.py' 2023-12-05T02:55:08,778 adding 'macrel/tests/test_features.py' 2023-12-05T02:55:08,779 adding 'macrel/tests/test_predict.py' 2023-12-05T02:55:08,781 adding 'macrel-1.3.0.dist-info/LICENSE' 2023-12-05T02:55:08,783 adding 'macrel-1.3.0.dist-info/METADATA' 2023-12-05T02:55:08,784 adding 'macrel-1.3.0.dist-info/WHEEL' 2023-12-05T02:55:08,785 adding 'macrel-1.3.0.dist-info/entry_points.txt' 2023-12-05T02:55:08,786 adding 'macrel-1.3.0.dist-info/top_level.txt' 2023-12-05T02:55:08,787 adding 'macrel-1.3.0.dist-info/RECORD' 2023-12-05T02:55:08,838 removing build/bdist.linux-armv7l/wheel 2023-12-05T02:55:08,956 Building wheel for macrel (setup.py): finished with status 'done' 2023-12-05T02:55:09,005 Created wheel for macrel: filename=macrel-1.3.0-py3-none-any.whl size=4670053 sha256=3da259eb438294850c2ff458e238de2149e4cd5afb84c93820237b440c6b42d1 2023-12-05T02:55:09,006 Stored in directory: /tmp/pip-ephem-wheel-cache-gten8cka/wheels/d2/89/c7/0e9aab8a74f754333819838a0a2364929dc7b90a9b86cc7a86 2023-12-05T02:55:09,019 Successfully built macrel 2023-12-05T02:55:09,142 Removed build tracker: '/tmp/pip-build-tracker-9bk7vwx1'