2023-12-05T08:39:27,255 Created temporary directory: /tmp/pip-build-tracker-83s0tsux
2023-12-05T08:39:27,257 Initialized build tracking at /tmp/pip-build-tracker-83s0tsux
2023-12-05T08:39:27,257 Created build tracker: /tmp/pip-build-tracker-83s0tsux
2023-12-05T08:39:27,257 Entered build tracker: /tmp/pip-build-tracker-83s0tsux
2023-12-05T08:39:27,258 Created temporary directory: /tmp/pip-wheel-146k7537
2023-12-05T08:39:27,261 Created temporary directory: /tmp/pip-ephem-wheel-cache-dslrfuvs
2023-12-05T08:39:27,285 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-05T08:39:27,289 2 location(s) to search for versions of ilus:
2023-12-05T08:39:27,289 * https://pypi.org/simple/ilus/
2023-12-05T08:39:27,289 * https://www.piwheels.org/simple/ilus/
2023-12-05T08:39:27,289 Fetching project page and analyzing links: https://pypi.org/simple/ilus/
2023-12-05T08:39:27,290 Getting page https://pypi.org/simple/ilus/
2023-12-05T08:39:27,292 Found index url https://pypi.org/simple/
2023-12-05T08:39:27,499 Fetched page https://pypi.org/simple/ilus/ as application/vnd.pypi.simple.v1+json
2023-12-05T08:39:27,502   Found link https://files.pythonhosted.org/packages/8e/55/649bd50aabb4f4b880b612986acaa44a19b692302b7a5a922def75599f5c/ilus-0.1.0.tar.gz (from https://pypi.org/simple/ilus/), version: 0.1.0
2023-12-05T08:39:27,503   Found link https://files.pythonhosted.org/packages/64/d1/c750f25d5de6a9fc5a603feed5c7059c5c7f1aa6809fa9c58e1381be2ca2/ilus-1.0.0.tar.gz (from https://pypi.org/simple/ilus/), version: 1.0.0
2023-12-05T08:39:27,503   Found link https://files.pythonhosted.org/packages/c8/bf/3716a026b6ebcb7028105356ac7922739ab7872a63eb43f7dfd886c5c5db/ilus-1.0.1.tar.gz (from https://pypi.org/simple/ilus/), version: 1.0.1
2023-12-05T08:39:27,504   Found link https://files.pythonhosted.org/packages/33/4a/0974529431296c5238c63eb91442bbe1176b16f82ce971cf237dac4c8627/ilus-1.0.2.tar.gz (from https://pypi.org/simple/ilus/), version: 1.0.2
2023-12-05T08:39:27,504   Found link https://files.pythonhosted.org/packages/5e/1b/630c5a16f2e4a5e5a4c28e15a20f787daf1e0b0472d1a3439f4d18fb4871/ilus-1.0.3.tar.gz (from https://pypi.org/simple/ilus/), version: 1.0.3
2023-12-05T08:39:27,505   Found link https://files.pythonhosted.org/packages/7d/90/c6c93779518796a59e0022ea5177b93bf0552e83160e9d1e8fafe34dfdec/ilus-1.0.4.tar.gz (from https://pypi.org/simple/ilus/), version: 1.0.4
2023-12-05T08:39:27,506   Found link https://files.pythonhosted.org/packages/f2/91/43458918520aa40a030b566ce3596210a4d855a84e3d15ddaa01830a0e8d/ilus-1.1.0.tar.gz (from https://pypi.org/simple/ilus/), version: 1.1.0
2023-12-05T08:39:27,506   Found link https://files.pythonhosted.org/packages/ef/90/20e1da660596a5f39ff1da1bd0ba4a484bb229ace3bfc77b0169d1636acd/ilus-1.1.1.tar.gz (from https://pypi.org/simple/ilus/), version: 1.1.1
2023-12-05T08:39:27,507   Found link https://files.pythonhosted.org/packages/0d/45/799c5f23cf1dedc8a7fa996f1d091a4d5e0f8b62eba461da5e60c50ad2eb/ilus-1.2.1.tar.gz (from https://pypi.org/simple/ilus/), version: 1.2.1
2023-12-05T08:39:27,508   Found link https://files.pythonhosted.org/packages/33/d9/1e1d7c5aa517e4648fbdfc9be2752fbf2424608e134845637241833f4f58/ilus-1.2.2.tar.gz (from https://pypi.org/simple/ilus/), version: 1.2.2
2023-12-05T08:39:27,508   Found link https://files.pythonhosted.org/packages/02/09/b4d9c429ed8e64f724b62efb78121803f65a3f90e02d15b45873166b1ccb/ilus-1.3.0.tar.gz (from https://pypi.org/simple/ilus/), version: 1.3.0
2023-12-05T08:39:27,509   Found link https://files.pythonhosted.org/packages/37/55/b19f8e151ea4fa9c133ba6d2c24943b15151b024b5bc7061e697b735e684/ilus-1.3.1.tar.gz (from https://pypi.org/simple/ilus/), version: 1.3.1
2023-12-05T08:39:27,510   Found link https://files.pythonhosted.org/packages/ca/da/e63844784ebb375cd530002de641ccc8a2abd8e95fa441516118c2bf1dea/ilus-1.3.2.tar.gz (from https://pypi.org/simple/ilus/) (requires-python:>=3.5), version: 1.3.2
2023-12-05T08:39:27,511   Found link https://files.pythonhosted.org/packages/a9/f5/39b3283f53318f349c8b722df8c91f6e316cd8ba20d8393a851118133d5a/ilus-2.0.0.tar.gz (from https://pypi.org/simple/ilus/) (requires-python:>=3.5), version: 2.0.0
2023-12-05T08:39:27,512 Fetching project page and analyzing links: https://www.piwheels.org/simple/ilus/
2023-12-05T08:39:27,513 Getting page https://www.piwheels.org/simple/ilus/
2023-12-05T08:39:27,514 Found index url https://www.piwheels.org/simple/
2023-12-05T08:39:27,668 Fetched page https://www.piwheels.org/simple/ilus/ as text/html
2023-12-05T08:39:27,672   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.3.2-py3-none-any.whl#sha256=6d315e8e8de0712c852788a1f124af02f5ccd5763b5d7210b937466f1a466365 (from https://www.piwheels.org/simple/ilus/) (requires-python:>=3.5)
2023-12-05T08:39:27,672   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.3.1-py3-none-any.whl#sha256=95994f378ecd3614fbaa5acf6972cc8bfaca26a138d2bb6953332d7e1d188abe (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,673   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.3.0-py3-none-any.whl#sha256=86f3cfa3b4075f80f64038efd70c6b4dcc9b2e92dd73740e90c438fbf17e6402 (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,673   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.2.2-py3-none-any.whl#sha256=57d5cc7a4de501b9759687f303a8ce24dee56a6bf3f469cdf8f34eedfbd5e3d6 (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,674   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.2.1-py3-none-any.whl#sha256=b35d6734ffaccb93bea222efb586b94c5e948e69b9410862e345c77db351eedb (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,674   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.1.1-py3-none-any.whl#sha256=e6c1337f5257980949564552b79bff1f389200cf3ad322a5f849728263b321f4 (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,675   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.1.0-py3-none-any.whl#sha256=d696434a6d520599e55cead1b1aed46c68b4068394416117d1cadd7f36db6c7d (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,675   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.0.4-py3-none-any.whl#sha256=e882e54d1fda965bbe97cd5c70a977824f1d81e79091d8679ea47c84bdd167f6 (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,676   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.0.2-py3-none-any.whl#sha256=d390a4ba1fee50a6e7041c77c317907d02dc3a78aa4f6c43699ca60147b43161 (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,676   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.0.1-py3-none-any.whl#sha256=b1787a95b35aa0f798fa13b7407a034445b46252d3453354d569d03a9bd458ce (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,677   Skipping link: No binaries permitted for ilus: https://www.piwheels.org/simple/ilus/ilus-1.0.0-py3-none-any.whl#sha256=f6edd0ca8dd180f27744489a2d97500ea9bbf8a31d1fd67abd9eb7b33fc5e275 (from https://www.piwheels.org/simple/ilus/)
2023-12-05T08:39:27,677 Skipping link: not a file: https://www.piwheels.org/simple/ilus/
2023-12-05T08:39:27,678 Skipping link: not a file: https://pypi.org/simple/ilus/
2023-12-05T08:39:27,698 Given no hashes to check 1 links for project 'ilus': discarding no candidates
2023-12-05T08:39:27,715 Collecting ilus==2.0.0
2023-12-05T08:39:27,718   Created temporary directory: /tmp/pip-unpack-8vhoqx8b
2023-12-05T08:39:27,944   Downloading ilus-2.0.0.tar.gz (56 kB)
2023-12-05T08:39:28,058   Added ilus==2.0.0 from https://files.pythonhosted.org/packages/a9/f5/39b3283f53318f349c8b722df8c91f6e316cd8ba20d8393a851118133d5a/ilus-2.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-83s0tsux'
2023-12-05T08:39:28,060   Running setup.py (path:/tmp/pip-wheel-146k7537/ilus_c7e2b5342e3544b29e21635d3eaab6e7/setup.py) egg_info for package ilus
2023-12-05T08:39:28,061   Created temporary directory: /tmp/pip-pip-egg-info-6bwy5tup
2023-12-05T08:39:28,062   Preparing metadata (setup.py): started
2023-12-05T08:39:28,063   Running command python setup.py egg_info
2023-12-05T08:39:29,118   running egg_info
2023-12-05T08:39:29,120   creating /tmp/pip-pip-egg-info-6bwy5tup/ilus.egg-info
2023-12-05T08:39:29,143   writing /tmp/pip-pip-egg-info-6bwy5tup/ilus.egg-info/PKG-INFO
2023-12-05T08:39:29,147   writing dependency_links to /tmp/pip-pip-egg-info-6bwy5tup/ilus.egg-info/dependency_links.txt
2023-12-05T08:39:29,149   writing entry points to /tmp/pip-pip-egg-info-6bwy5tup/ilus.egg-info/entry_points.txt
2023-12-05T08:39:29,150   writing requirements to /tmp/pip-pip-egg-info-6bwy5tup/ilus.egg-info/requires.txt
2023-12-05T08:39:29,151   writing top-level names to /tmp/pip-pip-egg-info-6bwy5tup/ilus.egg-info/top_level.txt
2023-12-05T08:39:29,152   writing manifest file '/tmp/pip-pip-egg-info-6bwy5tup/ilus.egg-info/SOURCES.txt'
2023-12-05T08:39:29,233   reading manifest file '/tmp/pip-pip-egg-info-6bwy5tup/ilus.egg-info/SOURCES.txt'
2023-12-05T08:39:29,235   adding license file 'LICENSE'
2023-12-05T08:39:29,237   writing manifest file '/tmp/pip-pip-egg-info-6bwy5tup/ilus.egg-info/SOURCES.txt'
2023-12-05T08:39:29,342   Preparing metadata (setup.py): finished with status 'done'
2023-12-05T08:39:29,348   Source in /tmp/pip-wheel-146k7537/ilus_c7e2b5342e3544b29e21635d3eaab6e7 has version 2.0.0, which satisfies requirement ilus==2.0.0 from https://files.pythonhosted.org/packages/a9/f5/39b3283f53318f349c8b722df8c91f6e316cd8ba20d8393a851118133d5a/ilus-2.0.0.tar.gz
2023-12-05T08:39:29,349   Removed ilus==2.0.0 from https://files.pythonhosted.org/packages/a9/f5/39b3283f53318f349c8b722df8c91f6e316cd8ba20d8393a851118133d5a/ilus-2.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-83s0tsux'
2023-12-05T08:39:29,358 Created temporary directory: /tmp/pip-unpack-dpsp5_pu
2023-12-05T08:39:29,359 Created temporary directory: /tmp/pip-unpack-hoxlgvov
2023-12-05T08:39:29,366 Building wheels for collected packages: ilus
2023-12-05T08:39:29,370   Created temporary directory: /tmp/pip-wheel-8d6shbwj
2023-12-05T08:39:29,370   Building wheel for ilus (setup.py): started
2023-12-05T08:39:29,371   Destination directory: /tmp/pip-wheel-8d6shbwj
2023-12-05T08:39:29,372   Running command python setup.py bdist_wheel
2023-12-05T08:39:30,343   running bdist_wheel
2023-12-05T08:39:30,436   running build
2023-12-05T08:39:30,436   running build_py
2023-12-05T08:39:30,462   creating build
2023-12-05T08:39:30,463   creating build/lib
2023-12-05T08:39:30,463   creating build/lib/ilus
2023-12-05T08:39:30,465   copying ilus/main.py -> build/lib/ilus
2023-12-05T08:39:30,467   copying ilus/__init__.py -> build/lib/ilus
2023-12-05T08:39:30,469   creating build/lib/ilus/pipeline
2023-12-05T08:39:30,470   copying ilus/pipeline/_germline_short_variant_discovery.py -> build/lib/ilus/pipeline
2023-12-05T08:39:30,472   copying ilus/pipeline/_command_args.py -> build/lib/ilus/pipeline
2023-12-05T08:39:30,474   copying ilus/pipeline/__init__.py -> build/lib/ilus/pipeline
2023-12-05T08:39:30,476   creating build/lib/ilus/launch
2023-12-05T08:39:30,477   copying ilus/launch/do.py -> build/lib/ilus/launch
2023-12-05T08:39:30,479   copying ilus/launch/runfunction.py -> build/lib/ilus/launch
2023-12-05T08:39:30,482   copying ilus/launch/__init__.py -> build/lib/ilus/launch
2023-12-05T08:39:30,483   creating build/lib/ilus/modules
2023-12-05T08:39:30,484   copying ilus/modules/gatk.py -> build/lib/ilus/modules
2023-12-05T08:39:30,487   copying ilus/modules/sentieon.py -> build/lib/ilus/modules
2023-12-05T08:39:30,489   copying ilus/modules/bcftools.py -> build/lib/ilus/modules
2023-12-05T08:39:30,491   copying ilus/modules/soapnuke.py -> build/lib/ilus/modules
2023-12-05T08:39:30,492   copying ilus/modules/bwa.py -> build/lib/ilus/modules
2023-12-05T08:39:30,494   copying ilus/modules/__init__.py -> build/lib/ilus/modules
2023-12-05T08:39:30,496   creating build/lib/ilus/modules/summary
2023-12-05T08:39:30,497   copying ilus/modules/summary/bam.py -> build/lib/ilus/modules/summary
2023-12-05T08:39:30,499   copying ilus/modules/summary/__init__.py -> build/lib/ilus/modules/summary
2023-12-05T08:39:30,501   creating build/lib/ilus/modules/utils
2023-12-05T08:39:30,501   copying ilus/modules/utils/_check_config.py -> build/lib/ilus/modules/utils
2023-12-05T08:39:30,503   copying ilus/modules/utils/_check_jobs.py -> build/lib/ilus/modules/utils
2023-12-05T08:39:30,504   copying ilus/modules/utils/_check_input.py -> build/lib/ilus/modules/utils
2023-12-05T08:39:30,506   copying ilus/modules/utils/__init__.py -> build/lib/ilus/modules/utils
2023-12-05T08:39:30,508   copying ilus/modules/utils/_split_jobs.py -> build/lib/ilus/modules/utils
2023-12-05T08:39:30,509   copying ilus/modules/utils/_utils.py -> build/lib/ilus/modules/utils
2023-12-05T08:39:30,511   running egg_info
2023-12-05T08:39:30,566   writing ilus.egg-info/PKG-INFO
2023-12-05T08:39:30,570   writing dependency_links to ilus.egg-info/dependency_links.txt
2023-12-05T08:39:30,571   writing entry points to ilus.egg-info/entry_points.txt
2023-12-05T08:39:30,572   writing requirements to ilus.egg-info/requires.txt
2023-12-05T08:39:30,573   writing top-level names to ilus.egg-info/top_level.txt
2023-12-05T08:39:30,603   reading manifest file 'ilus.egg-info/SOURCES.txt'
2023-12-05T08:39:30,606   adding license file 'LICENSE'
2023-12-05T08:39:30,608   writing manifest file 'ilus.egg-info/SOURCES.txt'
2023-12-05T08:39:30,638   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-12-05T08:39:30,639   !!

2023-12-05T08:39:30,640           ********************************************************************************
2023-12-05T08:39:30,640           Please avoid running ``setup.py`` directly.
2023-12-05T08:39:30,641           Instead, use pypa/build, pypa/installer or other
2023-12-05T08:39:30,641           standards-based tools.

2023-12-05T08:39:30,643           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-12-05T08:39:30,643           ********************************************************************************

2023-12-05T08:39:30,644   !!
2023-12-05T08:39:30,645     self.initialize_options()
2023-12-05T08:39:30,663   installing to build/bdist.linux-armv7l/wheel
2023-12-05T08:39:30,663   running install
2023-12-05T08:39:30,687   running install_lib
2023-12-05T08:39:30,711   creating build/bdist.linux-armv7l
2023-12-05T08:39:30,712   creating build/bdist.linux-armv7l/wheel
2023-12-05T08:39:30,713   creating build/bdist.linux-armv7l/wheel/ilus
2023-12-05T08:39:30,715   creating build/bdist.linux-armv7l/wheel/ilus/pipeline
2023-12-05T08:39:30,716   copying build/lib/ilus/pipeline/_germline_short_variant_discovery.py -> build/bdist.linux-armv7l/wheel/ilus/pipeline
2023-12-05T08:39:30,718   copying build/lib/ilus/pipeline/_command_args.py -> build/bdist.linux-armv7l/wheel/ilus/pipeline
2023-12-05T08:39:30,720   copying build/lib/ilus/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/ilus/pipeline
2023-12-05T08:39:30,722   copying build/lib/ilus/main.py -> build/bdist.linux-armv7l/wheel/ilus
2023-12-05T08:39:30,724   creating build/bdist.linux-armv7l/wheel/ilus/launch
2023-12-05T08:39:30,725   copying build/lib/ilus/launch/do.py -> build/bdist.linux-armv7l/wheel/ilus/launch
2023-12-05T08:39:30,728   copying build/lib/ilus/launch/runfunction.py -> build/bdist.linux-armv7l/wheel/ilus/launch
2023-12-05T08:39:30,730   copying build/lib/ilus/launch/__init__.py -> build/bdist.linux-armv7l/wheel/ilus/launch
2023-12-05T08:39:30,731   copying build/lib/ilus/__init__.py -> build/bdist.linux-armv7l/wheel/ilus
2023-12-05T08:39:30,733   creating build/bdist.linux-armv7l/wheel/ilus/modules
2023-12-05T08:39:30,734   copying build/lib/ilus/modules/gatk.py -> build/bdist.linux-armv7l/wheel/ilus/modules
2023-12-05T08:39:30,737   copying build/lib/ilus/modules/sentieon.py -> build/bdist.linux-armv7l/wheel/ilus/modules
2023-12-05T08:39:30,739   creating build/bdist.linux-armv7l/wheel/ilus/modules/summary
2023-12-05T08:39:30,740   copying build/lib/ilus/modules/summary/bam.py -> build/bdist.linux-armv7l/wheel/ilus/modules/summary
2023-12-05T08:39:30,742   copying build/lib/ilus/modules/summary/__init__.py -> build/bdist.linux-armv7l/wheel/ilus/modules/summary
2023-12-05T08:39:30,743   copying build/lib/ilus/modules/bcftools.py -> build/bdist.linux-armv7l/wheel/ilus/modules
2023-12-05T08:39:30,745   copying build/lib/ilus/modules/soapnuke.py -> build/bdist.linux-armv7l/wheel/ilus/modules
2023-12-05T08:39:30,747   creating build/bdist.linux-armv7l/wheel/ilus/modules/utils
2023-12-05T08:39:30,748   copying build/lib/ilus/modules/utils/_check_config.py -> build/bdist.linux-armv7l/wheel/ilus/modules/utils
2023-12-05T08:39:30,749   copying build/lib/ilus/modules/utils/_check_jobs.py -> build/bdist.linux-armv7l/wheel/ilus/modules/utils
2023-12-05T08:39:30,751   copying build/lib/ilus/modules/utils/_check_input.py -> build/bdist.linux-armv7l/wheel/ilus/modules/utils
2023-12-05T08:39:30,753   copying build/lib/ilus/modules/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ilus/modules/utils
2023-12-05T08:39:30,754   copying build/lib/ilus/modules/utils/_split_jobs.py -> build/bdist.linux-armv7l/wheel/ilus/modules/utils
2023-12-05T08:39:30,756   copying build/lib/ilus/modules/utils/_utils.py -> build/bdist.linux-armv7l/wheel/ilus/modules/utils
2023-12-05T08:39:30,757   copying build/lib/ilus/modules/bwa.py -> build/bdist.linux-armv7l/wheel/ilus/modules
2023-12-05T08:39:30,759   copying build/lib/ilus/modules/__init__.py -> build/bdist.linux-armv7l/wheel/ilus/modules
2023-12-05T08:39:30,760   running install_egg_info
2023-12-05T08:39:30,790   Copying ilus.egg-info to build/bdist.linux-armv7l/wheel/ilus-2.0.0-py3.11.egg-info
2023-12-05T08:39:30,801   running install_scripts
2023-12-05T08:39:30,819   creating build/bdist.linux-armv7l/wheel/ilus-2.0.0.dist-info/WHEEL
2023-12-05T08:39:30,821   creating '/tmp/pip-wheel-8d6shbwj/ilus-2.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-12-05T08:39:30,823   adding 'ilus/__init__.py'
2023-12-05T08:39:30,825   adding 'ilus/main.py'
2023-12-05T08:39:30,826   adding 'ilus/launch/__init__.py'
2023-12-05T08:39:30,828   adding 'ilus/launch/do.py'
2023-12-05T08:39:30,831   adding 'ilus/launch/runfunction.py'
2023-12-05T08:39:30,832   adding 'ilus/modules/__init__.py'
2023-12-05T08:39:30,834   adding 'ilus/modules/bcftools.py'
2023-12-05T08:39:30,835   adding 'ilus/modules/bwa.py'
2023-12-05T08:39:30,837   adding 'ilus/modules/gatk.py'
2023-12-05T08:39:30,839   adding 'ilus/modules/sentieon.py'
2023-12-05T08:39:30,840   adding 'ilus/modules/soapnuke.py'
2023-12-05T08:39:30,842   adding 'ilus/modules/summary/__init__.py'
2023-12-05T08:39:30,843   adding 'ilus/modules/summary/bam.py'
2023-12-05T08:39:30,845   adding 'ilus/modules/utils/__init__.py'
2023-12-05T08:39:30,846   adding 'ilus/modules/utils/_check_config.py'
2023-12-05T08:39:30,847   adding 'ilus/modules/utils/_check_input.py'
2023-12-05T08:39:30,848   adding 'ilus/modules/utils/_check_jobs.py'
2023-12-05T08:39:30,850   adding 'ilus/modules/utils/_split_jobs.py'
2023-12-05T08:39:30,851   adding 'ilus/modules/utils/_utils.py'
2023-12-05T08:39:30,853   adding 'ilus/pipeline/__init__.py'
2023-12-05T08:39:30,854   adding 'ilus/pipeline/_command_args.py'
2023-12-05T08:39:30,856   adding 'ilus/pipeline/_germline_short_variant_discovery.py'
2023-12-05T08:39:30,864   adding 'ilus-2.0.0.dist-info/LICENSE'
2023-12-05T08:39:30,867   adding 'ilus-2.0.0.dist-info/METADATA'
2023-12-05T08:39:30,868   adding 'ilus-2.0.0.dist-info/WHEEL'
2023-12-05T08:39:30,869   adding 'ilus-2.0.0.dist-info/entry_points.txt'
2023-12-05T08:39:30,870   adding 'ilus-2.0.0.dist-info/top_level.txt'
2023-12-05T08:39:30,871   adding 'ilus-2.0.0.dist-info/RECORD'
2023-12-05T08:39:30,873   removing build/bdist.linux-armv7l/wheel
2023-12-05T08:39:30,989   Building wheel for ilus (setup.py): finished with status 'done'
2023-12-05T08:39:30,992   Created wheel for ilus: filename=ilus-2.0.0-py3-none-any.whl size=53241 sha256=3ff0bdf5861ce49860d50b14e8c41b3662bc37b4313e3bc43116854776dc9382
2023-12-05T08:39:30,993   Stored in directory: /tmp/pip-ephem-wheel-cache-dslrfuvs/wheels/71/04/42/6a57bd2a8816a5099c6e36eaaebf769ff960d320684ebc352d
2023-12-05T08:39:31,009 Successfully built ilus
2023-12-05T08:39:31,013 Removed build tracker: '/tmp/pip-build-tracker-83s0tsux'