2023-12-05T13:02:36,642 Created temporary directory: /tmp/pip-build-tracker-v4vdevjy 2023-12-05T13:02:36,643 Initialized build tracking at /tmp/pip-build-tracker-v4vdevjy 2023-12-05T13:02:36,644 Created build tracker: /tmp/pip-build-tracker-v4vdevjy 2023-12-05T13:02:36,644 Entered build tracker: /tmp/pip-build-tracker-v4vdevjy 2023-12-05T13:02:36,645 Created temporary directory: /tmp/pip-wheel-pzrl7846 2023-12-05T13:02:36,649 Created temporary directory: /tmp/pip-ephem-wheel-cache-1c31l160 2023-12-05T13:02:36,671 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-05T13:02:36,675 2 location(s) to search for versions of sequana-variant-calling: 2023-12-05T13:02:36,675 * https://pypi.org/simple/sequana-variant-calling/ 2023-12-05T13:02:36,675 * https://www.piwheels.org/simple/sequana-variant-calling/ 2023-12-05T13:02:36,675 Fetching project page and analyzing links: https://pypi.org/simple/sequana-variant-calling/ 2023-12-05T13:02:36,676 Getting page https://pypi.org/simple/sequana-variant-calling/ 2023-12-05T13:02:36,678 Found index url https://pypi.org/simple/ 2023-12-05T13:02:36,890 Fetched page https://pypi.org/simple/sequana-variant-calling/ as application/vnd.pypi.simple.v1+json 2023-12-05T13:02:36,895 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/8a/df/c893a08b471c537ca9941a06b711d924b5b4b10b7321128c43d940f1a3fb/sequana_variant_calling-0.8.0-py3.5.egg (from https://pypi.org/simple/sequana-variant-calling/) 2023-12-05T13:02:36,896 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/a5/3e/63014a9792a51a23e198e0574e32da60d8e615ac877752463ed4f5f1e147/sequana_variant_calling-0.8.1-py3.5.egg (from https://pypi.org/simple/sequana-variant-calling/) 2023-12-05T13:02:36,896 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/30/e7/2e7052bff8e49aea35fc674af929e40b0a683f353958da50ac9133c9a1fe/sequana_variant_calling-0.8.2-py3.5.egg (from https://pypi.org/simple/sequana-variant-calling/) 2023-12-05T13:02:36,897 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/42/3f/b11c629fbd7ed8937b1c827db65017aa348fd3073c2a6aee048ddef7630b/sequana_variant_calling-0.8.3-py3.5.egg (from https://pypi.org/simple/sequana-variant-calling/) 2023-12-05T13:02:36,897 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/af/79/456b5c7ee7867d8e92821c7011a365b183806a2a350b8a4abfcaa73d0186/sequana_variant_calling-0.8.4-py3.5.egg (from https://pypi.org/simple/sequana-variant-calling/) 2023-12-05T13:02:36,898 Found link https://files.pythonhosted.org/packages/c3/9b/107b8e187a492fbd3b9f95917cc57f2bc668409a7764acffaa2c59a00faf/sequana_variant_calling-0.8.4.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.8.4 2023-12-05T13:02:36,899 Found link https://files.pythonhosted.org/packages/25/6a/02aab9a14bbb62abdb5551bfbe7ca41c09417d5be35de222e2331c2f4012/sequana_variant_calling-0.8.5.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.8.5 2023-12-05T13:02:36,899 Found link https://files.pythonhosted.org/packages/9b/f2/1916ac0d90c12613e26047cbd2677f8da6dc7b2d258dd7cf7eaccd825c05/sequana_variant_calling-0.8.6.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.8.6 2023-12-05T13:02:36,900 Found link https://files.pythonhosted.org/packages/56/ce/2a87ecefe2f090fbd5810d65735882148fa49dcd5317795e7dae3c9c16a5/sequana_variant_calling-0.8.7.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.8.7 2023-12-05T13:02:36,901 Found link https://files.pythonhosted.org/packages/28/26/ab4d8da4824a3b1e21a36bcbacd184073a89d2f77ca6a438415100878b1e/sequana_variant_calling-0.9.0.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.9.0 2023-12-05T13:02:36,901 Found link https://files.pythonhosted.org/packages/1e/03/a0dd0d9a198da31809649fe4ab3ecf8177456c535014a385ed9037739a46/sequana_variant_calling-0.9.1.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.9.1 2023-12-05T13:02:36,902 Found link https://files.pythonhosted.org/packages/e1/4a/8f2c250a85c2d42109a179d71aea5c53d1d5d494fd2690cb11586bb66cfb/sequana_variant_calling-0.9.2.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.9.2 2023-12-05T13:02:36,903 Found link https://files.pythonhosted.org/packages/e6/4a/a9a6144d197a3ebb4d75a7f751731375e854e79ad61cb4021399022afc8e/sequana_variant_calling-0.9.3.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.9.3 2023-12-05T13:02:36,903 Found link https://files.pythonhosted.org/packages/e3/de/e28ecb5381b8eaf1f02bb54a7ac89bf237f7e99f70f779c1789b16f483dc/sequana_variant_calling-0.9.4.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.9.4 2023-12-05T13:02:36,904 Found link https://files.pythonhosted.org/packages/f6/7a/2416ca01266ad1e0eb3e91bea899727e48368562ca4598f1ba4633a7154d/sequana_variant_calling-0.9.5.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.9.5 2023-12-05T13:02:36,904 Found link https://files.pythonhosted.org/packages/96/97/16c238324bcb3028380622a46c639237e17b56083f5a174c15fe83565b84/sequana_variant_calling-0.10.0.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.10.0 2023-12-05T13:02:36,905 Found link https://files.pythonhosted.org/packages/c5/5b/a371a1cfc200d9c486e8ed27936f06b63f4ded17918efc949317c3a90dc6/sequana_variant_calling-0.11.0.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.11.0 2023-12-05T13:02:36,906 Found link https://files.pythonhosted.org/packages/8c/43/79ee532772967ddf822857c5f45ab1f0b6249a5d1eb604ef5449f86dfadd/sequana_variant_calling-0.12.0.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 0.12.0 2023-12-05T13:02:36,906 Found link https://files.pythonhosted.org/packages/6d/c5/bac62ec61c33ed403f28d0d32e860d981c2e16c31e3ac4ef4b6eb009f1c0/sequana_variant_calling-1.0.0.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 1.0.0 2023-12-05T13:02:36,907 Found link https://files.pythonhosted.org/packages/31/ef/6beb7c569e50e63a69eecce80dfb0cb5124728421e52505c9e376614c443/sequana_variant_calling-1.0.1.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 1.0.1 2023-12-05T13:02:36,907 Found link https://files.pythonhosted.org/packages/09/19/37b03efc9ec706f44c27ddc2e1303745f4b4e057c86e94bedc8772f73f1b/sequana_variant_calling-1.0.2.tar.gz (from https://pypi.org/simple/sequana-variant-calling/), version: 1.0.2 2023-12-05T13:02:36,908 Skipping link: No binaries permitted for sequana-variant-calling: https://files.pythonhosted.org/packages/f8/03/019009723efab9e15677a19bdf10d358c17dd0fea181fceb1bbc0bf3c3e2/sequana_variant_calling-1.1.0-py3-none-any.whl (from https://pypi.org/simple/sequana-variant-calling/) (requires-python:>=3.8,<4.0) 2023-12-05T13:02:36,909 Found link https://files.pythonhosted.org/packages/67/fa/63003161681f12421748b519c2782a7c10e340b0c85f7223f1254f5f25a6/sequana_variant_calling-1.1.0.tar.gz (from https://pypi.org/simple/sequana-variant-calling/) (requires-python:>=3.8,<4.0), version: 1.1.0 2023-12-05T13:02:36,910 Skipping link: No binaries permitted for sequana-variant-calling: https://files.pythonhosted.org/packages/54/f2/37843bd26ef923420ccee0fd3124990be43e8d259e91780e3f6af76367b9/sequana_variant_calling-1.1.1-py3-none-any.whl (from https://pypi.org/simple/sequana-variant-calling/) (requires-python:>=3.8,<4.0) 2023-12-05T13:02:36,911 Found link https://files.pythonhosted.org/packages/b2/3b/3d1de308cde78633f2424927191b3899ee51f5cecaf5537baa0b636101b0/sequana_variant_calling-1.1.1.tar.gz (from https://pypi.org/simple/sequana-variant-calling/) (requires-python:>=3.8,<4.0), version: 1.1.1 2023-12-05T13:02:36,912 Fetching project page and analyzing links: https://www.piwheels.org/simple/sequana-variant-calling/ 2023-12-05T13:02:36,912 Getting page https://www.piwheels.org/simple/sequana-variant-calling/ 2023-12-05T13:02:36,914 Found index url https://www.piwheels.org/simple/ 2023-12-05T13:02:37,073 Fetched page https://www.piwheels.org/simple/sequana-variant-calling/ as text/html 2023-12-05T13:02:37,078 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-1.1.0-py3-none-any.whl#sha256=647e8e4be51f1e3b4986d33b6825bf7896669912bb452c77f3ff0ab06ece1657 (from https://www.piwheels.org/simple/sequana-variant-calling/) (requires-python:>=3.8,<4.0) 2023-12-05T13:02:37,079 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-1.0.2-py3-none-any.whl#sha256=7f8da3fb28eeae815f06fd0497ecaf2362a2092871233647da6ad24c1ff48bd0 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,079 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-1.0.1-py3-none-any.whl#sha256=7806578ff18913f1718215f106679cf68572d1e3257cebac518f02b486f59c74 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,080 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-1.0.0-py3-none-any.whl#sha256=c5de629c956845fb1675abb738b74fab5c025d0623c41dba0cb22dc60c020147 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,080 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.12.0-py3-none-any.whl#sha256=cddee99bb0ffc4cdd89eb88c88807088497f730be5348e6eff2ba5aecaa37903 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,081 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.11.0-py3-none-any.whl#sha256=5f3c9cb5f10d516228303fe38ce9c75c75074e086e1aadb8030d0b40f9e911a0 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,081 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.10.0-py3-none-any.whl#sha256=42d06a960cc388df444fef1ac4e7f85ff63d31f2faf896c1609a4e423c1a49cd (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,082 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.9.5-py3-none-any.whl#sha256=d81286932c2c6d2e4da09fd160f9d3a7f0632bcbfb3349f445ab8a6c4a788888 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,083 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.9.4-py3-none-any.whl#sha256=bbab12f48c6238be7e6559f93f5448790579e6d481f00d968b8a513cfdbdc032 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,083 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.9.3-py3-none-any.whl#sha256=7709abb7395707484f12525714c3343749076a7273ed22ebc0fd477b1a88f398 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,084 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.9.2-py3-none-any.whl#sha256=855d452d20c04ce06f52c0cbfaf8ccc1ebf4aa2f6c6148a9da253e06e2250746 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,084 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.9.1-py3-none-any.whl#sha256=d2e2b6952759c27225135b2c04569826335377171e9be061a3763397df847118 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,085 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.9.0-py3-none-any.whl#sha256=40334ec0a05a4ca0704b57844aec87b136f92f836d55c642419a02b7e084631c (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,085 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.8.7-py3-none-any.whl#sha256=902828d511277761affdd0481c6dcaf3073b328d3df9caa5fe4bf5183dab594a (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,086 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.8.6-py3-none-any.whl#sha256=97d98d544cccdbd35d2ca3636136b122880dee02908ec041695f7146b9003799 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,086 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.8.5-py3-none-any.whl#sha256=117ce276f7967d7296d73f535fc076cfef44e4987191a481cf1e3e2104f39be7 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,087 Skipping link: No binaries permitted for sequana-variant-calling: https://www.piwheels.org/simple/sequana-variant-calling/sequana_variant_calling-0.8.4-py3-none-any.whl#sha256=99b11288616f743d90f121a0fb81503f4e1955947266a114b2bc304ba7cf2b79 (from https://www.piwheels.org/simple/sequana-variant-calling/) 2023-12-05T13:02:37,087 Skipping link: not a file: https://www.piwheels.org/simple/sequana-variant-calling/ 2023-12-05T13:02:37,088 Skipping link: not a file: https://pypi.org/simple/sequana-variant-calling/ 2023-12-05T13:02:37,108 Given no hashes to check 1 links for project 'sequana-variant-calling': discarding no candidates 2023-12-05T13:02:37,127 Collecting sequana-variant-calling==1.1.1 2023-12-05T13:02:37,129 Created temporary directory: /tmp/pip-unpack-9ijno90l 2023-12-05T13:02:37,353 Downloading sequana_variant_calling-1.1.1.tar.gz (109 kB) 2023-12-05T13:02:37,449 Added sequana-variant-calling==1.1.1 from https://files.pythonhosted.org/packages/b2/3b/3d1de308cde78633f2424927191b3899ee51f5cecaf5537baa0b636101b0/sequana_variant_calling-1.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-v4vdevjy' 2023-12-05T13:02:37,454 Created temporary directory: /tmp/pip-build-env-jdhy6hlj 2023-12-05T13:02:37,459 Installing build dependencies: started 2023-12-05T13:02:37,460 Running command pip subprocess to install build dependencies 2023-12-05T13:02:38,603 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-12-05T13:02:39,128 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-05T13:02:39,621 Collecting poetry-core>=1.0.0 2023-12-05T13:02:39,638 Using cached https://www.piwheels.org/simple/poetry-core/poetry_core-1.8.1-py3-none-any.whl (306 kB) 2023-12-05T13:02:41,877 Installing collected packages: poetry-core 2023-12-05T13:02:43,089 Successfully installed poetry-core-1.8.1 2023-12-05T13:02:43,585 Installing build dependencies: finished with status 'done' 2023-12-05T13:02:43,588 Getting requirements to build wheel: started 2023-12-05T13:02:43,590 Running command Getting requirements to build wheel 2023-12-05T13:02:43,959 Getting requirements to build wheel: finished with status 'done' 2023-12-05T13:02:43,962 Created temporary directory: /tmp/pip-modern-metadata-6asj7419 2023-12-05T13:02:43,964 Preparing metadata (pyproject.toml): started 2023-12-05T13:02:43,965 Running command Preparing metadata (pyproject.toml) 2023-12-05T13:02:44,804 Preparing metadata (pyproject.toml): finished with status 'done' 2023-12-05T13:02:44,808 Source in /tmp/pip-wheel-pzrl7846/sequana-variant-calling_eae034a2e9d54160a8ddd4543aa5aa12 has version 1.1.1, which satisfies requirement sequana-variant-calling==1.1.1 from https://files.pythonhosted.org/packages/b2/3b/3d1de308cde78633f2424927191b3899ee51f5cecaf5537baa0b636101b0/sequana_variant_calling-1.1.1.tar.gz 2023-12-05T13:02:44,809 Removed sequana-variant-calling==1.1.1 from https://files.pythonhosted.org/packages/b2/3b/3d1de308cde78633f2424927191b3899ee51f5cecaf5537baa0b636101b0/sequana_variant_calling-1.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-v4vdevjy' 2023-12-05T13:02:44,816 Created temporary directory: /tmp/pip-unpack-dhskau0y 2023-12-05T13:02:44,817 Created temporary directory: /tmp/pip-unpack-oas4olq4 2023-12-05T13:02:44,825 Building wheels for collected packages: sequana-variant-calling 2023-12-05T13:02:44,829 Created temporary directory: /tmp/pip-wheel-5c78vrqy 2023-12-05T13:02:44,829 Destination directory: /tmp/pip-wheel-5c78vrqy 2023-12-05T13:02:44,832 Building wheel for sequana-variant-calling (pyproject.toml): started 2023-12-05T13:02:44,833 Running command Building wheel for sequana-variant-calling (pyproject.toml) 2023-12-05T13:02:45,606 fatal: not a git repository (or any of the parent directories): .git 2023-12-05T13:02:45,722 Building wheel for sequana-variant-calling (pyproject.toml): finished with status 'done' 2023-12-05T13:02:45,728 Created wheel for sequana-variant-calling: filename=sequana_variant_calling-1.1.1-py3-none-any.whl size=108247 sha256=b2d27985d34c96773e9a6e753a3a59ba97e092c5cdf814c15fe8c1a0192f2e27 2023-12-05T13:02:45,729 Stored in directory: /tmp/pip-ephem-wheel-cache-1c31l160/wheels/db/8e/02/900b05e339998ffcb14a95a97d1e061f2eaa61b28cd3685787 2023-12-05T13:02:45,741 Successfully built sequana-variant-calling 2023-12-05T13:02:45,748 Removed build tracker: '/tmp/pip-build-tracker-v4vdevjy'