2023-12-06T18:15:49,965 Created temporary directory: /tmp/pip-build-tracker-ybe_9c2g 2023-12-06T18:15:49,966 Initialized build tracking at /tmp/pip-build-tracker-ybe_9c2g 2023-12-06T18:15:49,967 Created build tracker: /tmp/pip-build-tracker-ybe_9c2g 2023-12-06T18:15:49,967 Entered build tracker: /tmp/pip-build-tracker-ybe_9c2g 2023-12-06T18:15:49,968 Created temporary directory: /tmp/pip-wheel-8c4g_zcv 2023-12-06T18:15:49,971 Created temporary directory: /tmp/pip-ephem-wheel-cache-u0tsclj4 2023-12-06T18:15:49,993 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-06T18:15:49,997 2 location(s) to search for versions of cas-tools: 2023-12-06T18:15:49,997 * https://pypi.org/simple/cas-tools/ 2023-12-06T18:15:49,997 * https://www.piwheels.org/simple/cas-tools/ 2023-12-06T18:15:49,998 Fetching project page and analyzing links: https://pypi.org/simple/cas-tools/ 2023-12-06T18:15:49,999 Getting page https://pypi.org/simple/cas-tools/ 2023-12-06T18:15:50,000 Found index url https://pypi.org/simple/ 2023-12-06T18:15:50,207 Fetched page https://pypi.org/simple/cas-tools/ as application/vnd.pypi.simple.v1+json 2023-12-06T18:15:50,208 Found link https://files.pythonhosted.org/packages/39/25/84ad8f63a94c6504874dc8b8952559a8173e31c44d7085681005874aaaec/cas-tools-0.0.1.dev1.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev1 2023-12-06T18:15:50,209 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/e7/15/c3d6bdb34ca613e297547d37a7d1500eb43dd369b4086bdf2564fb8abce8/cas_tools-0.0.1.dev1-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-06T18:15:50,210 Fetching project page and analyzing links: https://www.piwheels.org/simple/cas-tools/ 2023-12-06T18:15:50,210 Getting page https://www.piwheels.org/simple/cas-tools/ 2023-12-06T18:15:50,212 Found index url https://www.piwheels.org/simple/ 2023-12-06T18:15:50,365 Fetched page https://www.piwheels.org/simple/cas-tools/ as text/html 2023-12-06T18:15:50,366 Skipping link: not a file: https://www.piwheels.org/simple/cas-tools/ 2023-12-06T18:15:50,367 Skipping link: not a file: https://pypi.org/simple/cas-tools/ 2023-12-06T18:15:50,385 Given no hashes to check 1 links for project 'cas-tools': discarding no candidates 2023-12-06T18:15:50,406 Collecting cas-tools==0.0.1.dev1 2023-12-06T18:15:50,408 Created temporary directory: /tmp/pip-unpack-birielop 2023-12-06T18:15:50,621 Downloading cas-tools-0.0.1.dev1.tar.gz (10 kB) 2023-12-06T18:15:50,659 Added cas-tools==0.0.1.dev1 from https://files.pythonhosted.org/packages/39/25/84ad8f63a94c6504874dc8b8952559a8173e31c44d7085681005874aaaec/cas-tools-0.0.1.dev1.tar.gz to build tracker '/tmp/pip-build-tracker-ybe_9c2g' 2023-12-06T18:15:50,660 Running setup.py (path:/tmp/pip-wheel-8c4g_zcv/cas-tools_991b8c57521c452fb67c6b2b8fcc0778/setup.py) egg_info for package cas-tools 2023-12-06T18:15:50,662 Created temporary directory: /tmp/pip-pip-egg-info-iunrp2b7 2023-12-06T18:15:50,662 Preparing metadata (setup.py): started 2023-12-06T18:15:50,664 Running command python setup.py egg_info 2023-12-06T18:15:51,664 running egg_info 2023-12-06T18:15:51,665 creating /tmp/pip-pip-egg-info-iunrp2b7/cas_tools.egg-info 2023-12-06T18:15:51,689 writing /tmp/pip-pip-egg-info-iunrp2b7/cas_tools.egg-info/PKG-INFO 2023-12-06T18:15:51,692 writing dependency_links to /tmp/pip-pip-egg-info-iunrp2b7/cas_tools.egg-info/dependency_links.txt 2023-12-06T18:15:51,693 writing entry points to /tmp/pip-pip-egg-info-iunrp2b7/cas_tools.egg-info/entry_points.txt 2023-12-06T18:15:51,695 writing requirements to /tmp/pip-pip-egg-info-iunrp2b7/cas_tools.egg-info/requires.txt 2023-12-06T18:15:51,696 writing top-level names to /tmp/pip-pip-egg-info-iunrp2b7/cas_tools.egg-info/top_level.txt 2023-12-06T18:15:51,698 writing manifest file '/tmp/pip-pip-egg-info-iunrp2b7/cas_tools.egg-info/SOURCES.txt' 2023-12-06T18:15:51,771 reading manifest file '/tmp/pip-pip-egg-info-iunrp2b7/cas_tools.egg-info/SOURCES.txt' 2023-12-06T18:15:51,774 writing manifest file '/tmp/pip-pip-egg-info-iunrp2b7/cas_tools.egg-info/SOURCES.txt' 2023-12-06T18:15:51,878 Preparing metadata (setup.py): finished with status 'done' 2023-12-06T18:15:51,882 Source in /tmp/pip-wheel-8c4g_zcv/cas-tools_991b8c57521c452fb67c6b2b8fcc0778 has version 0.0.1.dev1, which satisfies requirement cas-tools==0.0.1.dev1 from https://files.pythonhosted.org/packages/39/25/84ad8f63a94c6504874dc8b8952559a8173e31c44d7085681005874aaaec/cas-tools-0.0.1.dev1.tar.gz 2023-12-06T18:15:51,883 Removed cas-tools==0.0.1.dev1 from https://files.pythonhosted.org/packages/39/25/84ad8f63a94c6504874dc8b8952559a8173e31c44d7085681005874aaaec/cas-tools-0.0.1.dev1.tar.gz from build tracker '/tmp/pip-build-tracker-ybe_9c2g' 2023-12-06T18:15:51,888 Created temporary directory: /tmp/pip-unpack-272igfjj 2023-12-06T18:15:51,889 Created temporary directory: /tmp/pip-unpack-madajlql 2023-12-06T18:15:51,896 Building wheels for collected packages: cas-tools 2023-12-06T18:15:51,900 Created temporary directory: /tmp/pip-wheel-6cxfqour 2023-12-06T18:15:51,900 Building wheel for cas-tools (setup.py): started 2023-12-06T18:15:51,902 Destination directory: /tmp/pip-wheel-6cxfqour 2023-12-06T18:15:51,902 Running command python setup.py bdist_wheel 2023-12-06T18:15:52,865 running bdist_wheel 2023-12-06T18:15:52,955 running build 2023-12-06T18:15:52,956 running build_py 2023-12-06T18:15:52,982 creating build 2023-12-06T18:15:52,982 creating build/lib 2023-12-06T18:15:52,983 creating build/lib/cas 2023-12-06T18:15:52,984 copying src/cas/model.py -> build/lib/cas 2023-12-06T18:15:52,987 copying src/cas/__main__.py -> build/lib/cas 2023-12-06T18:15:52,989 copying src/cas/anndata_conversion.py -> build/lib/cas 2023-12-06T18:15:52,991 copying src/cas/__init__.py -> build/lib/cas 2023-12-06T18:15:52,993 copying src/cas/flatten_data_to_anndata.py -> build/lib/cas 2023-12-06T18:15:52,995 copying src/cas/file_utils.py -> build/lib/cas 2023-12-06T18:15:52,997 running egg_info 2023-12-06T18:15:53,051 writing src/cas_tools.egg-info/PKG-INFO 2023-12-06T18:15:53,054 writing dependency_links to src/cas_tools.egg-info/dependency_links.txt 2023-12-06T18:15:53,056 writing entry points to src/cas_tools.egg-info/entry_points.txt 2023-12-06T18:15:53,057 writing requirements to src/cas_tools.egg-info/requires.txt 2023-12-06T18:15:53,058 writing top-level names to src/cas_tools.egg-info/top_level.txt 2023-12-06T18:15:53,085 reading manifest file 'src/cas_tools.egg-info/SOURCES.txt' 2023-12-06T18:15:53,089 writing manifest file 'src/cas_tools.egg-info/SOURCES.txt' 2023-12-06T18:15:53,114 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-12-06T18:15:53,114 !! 2023-12-06T18:15:53,116 ******************************************************************************** 2023-12-06T18:15:53,116 Please avoid running ``setup.py`` directly. 2023-12-06T18:15:53,117 Instead, use pypa/build, pypa/installer or other 2023-12-06T18:15:53,117 standards-based tools. 2023-12-06T18:15:53,118 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-12-06T18:15:53,119 ******************************************************************************** 2023-12-06T18:15:53,120 !! 2023-12-06T18:15:53,121 self.initialize_options() 2023-12-06T18:15:53,139 installing to build/bdist.linux-armv7l/wheel 2023-12-06T18:15:53,140 running install 2023-12-06T18:15:53,164 running install_lib 2023-12-06T18:15:53,188 creating build/bdist.linux-armv7l 2023-12-06T18:15:53,188 creating build/bdist.linux-armv7l/wheel 2023-12-06T18:15:53,190 creating build/bdist.linux-armv7l/wheel/cas 2023-12-06T18:15:53,191 copying build/lib/cas/model.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-06T18:15:53,193 copying build/lib/cas/__main__.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-06T18:15:53,196 copying build/lib/cas/anndata_conversion.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-06T18:15:53,198 copying build/lib/cas/__init__.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-06T18:15:53,199 copying build/lib/cas/flatten_data_to_anndata.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-06T18:15:53,201 copying build/lib/cas/file_utils.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-06T18:15:53,203 running install_egg_info 2023-12-06T18:15:53,232 Copying src/cas_tools.egg-info to build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev1-py3.11.egg-info 2023-12-06T18:15:53,247 running install_scripts 2023-12-06T18:15:53,260 creating build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev1.dist-info/WHEEL 2023-12-06T18:15:53,262 creating '/tmp/pip-wheel-6cxfqour/cas_tools-0.0.1.dev1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-06T18:15:53,264 adding 'cas/__init__.py' 2023-12-06T18:15:53,266 adding 'cas/__main__.py' 2023-12-06T18:15:53,268 adding 'cas/anndata_conversion.py' 2023-12-06T18:15:53,269 adding 'cas/file_utils.py' 2023-12-06T18:15:53,271 adding 'cas/flatten_data_to_anndata.py' 2023-12-06T18:15:53,273 adding 'cas/model.py' 2023-12-06T18:15:53,275 adding 'cas_tools-0.0.1.dev1.dist-info/METADATA' 2023-12-06T18:15:53,276 adding 'cas_tools-0.0.1.dev1.dist-info/WHEEL' 2023-12-06T18:15:53,277 adding 'cas_tools-0.0.1.dev1.dist-info/entry_points.txt' 2023-12-06T18:15:53,278 adding 'cas_tools-0.0.1.dev1.dist-info/top_level.txt' 2023-12-06T18:15:53,279 adding 'cas_tools-0.0.1.dev1.dist-info/RECORD' 2023-12-06T18:15:53,280 removing build/bdist.linux-armv7l/wheel 2023-12-06T18:15:53,391 Building wheel for cas-tools (setup.py): finished with status 'done' 2023-12-06T18:15:53,393 Created wheel for cas-tools: filename=cas_tools-0.0.1.dev1-py3-none-any.whl size=11759 sha256=44c420d45db20626cfaa3e67b0fac798db383ceeda7559e02131debe0722a092 2023-12-06T18:15:53,395 Stored in directory: /tmp/pip-ephem-wheel-cache-u0tsclj4/wheels/fe/dc/43/ab61d5d33447b13d2784af9522ee95f4ff40afe5c9e560e906 2023-12-06T18:15:53,404 Successfully built cas-tools 2023-12-06T18:15:53,407 Removed build tracker: '/tmp/pip-build-tracker-ybe_9c2g'