2023-12-08T12:11:49,703 Created temporary directory: /tmp/pip-build-tracker-gl5n781h 2023-12-08T12:11:49,704 Initialized build tracking at /tmp/pip-build-tracker-gl5n781h 2023-12-08T12:11:49,705 Created build tracker: /tmp/pip-build-tracker-gl5n781h 2023-12-08T12:11:49,705 Entered build tracker: /tmp/pip-build-tracker-gl5n781h 2023-12-08T12:11:49,706 Created temporary directory: /tmp/pip-wheel-ibitygaf 2023-12-08T12:11:49,710 Created temporary directory: /tmp/pip-ephem-wheel-cache-esldp2vx 2023-12-08T12:11:49,732 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-08T12:11:49,735 2 location(s) to search for versions of cas-tools: 2023-12-08T12:11:49,735 * https://pypi.org/simple/cas-tools/ 2023-12-08T12:11:49,735 * https://www.piwheels.org/simple/cas-tools/ 2023-12-08T12:11:49,736 Fetching project page and analyzing links: https://pypi.org/simple/cas-tools/ 2023-12-08T12:11:49,737 Getting page https://pypi.org/simple/cas-tools/ 2023-12-08T12:11:49,738 Found index url https://pypi.org/simple/ 2023-12-08T12:11:49,960 Fetched page https://pypi.org/simple/cas-tools/ as application/vnd.pypi.simple.v1+json 2023-12-08T12:11:49,962 Found link https://files.pythonhosted.org/packages/39/25/84ad8f63a94c6504874dc8b8952559a8173e31c44d7085681005874aaaec/cas-tools-0.0.1.dev1.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev1 2023-12-08T12:11:49,963 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/e7/15/c3d6bdb34ca613e297547d37a7d1500eb43dd369b4086bdf2564fb8abce8/cas_tools-0.0.1.dev1-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-08T12:11:49,963 Found link https://files.pythonhosted.org/packages/8b/08/a7b6ef7b2d95e0c54aecb418b2d9659844b67aa83fdfebe6ea61e276a64d/cas-tools-0.0.1.dev2.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev2 2023-12-08T12:11:49,964 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/08/9b/16ebcd2b8da3b0b0ca1000a97c32d40ded9b724fef4deecc5ff6a6121c26/cas_tools-0.0.1.dev2-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-08T12:11:49,965 Fetching project page and analyzing links: https://www.piwheels.org/simple/cas-tools/ 2023-12-08T12:11:49,965 Getting page https://www.piwheels.org/simple/cas-tools/ 2023-12-08T12:11:49,967 Found index url https://www.piwheels.org/simple/ 2023-12-08T12:11:50,128 Fetched page https://www.piwheels.org/simple/cas-tools/ as text/html 2023-12-08T12:11:50,129 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev1-py3-none-any.whl#sha256=44c420d45db20626cfaa3e67b0fac798db383ceeda7559e02131debe0722a092 (from https://www.piwheels.org/simple/cas-tools/) 2023-12-08T12:11:50,130 Skipping link: not a file: https://www.piwheels.org/simple/cas-tools/ 2023-12-08T12:11:50,131 Skipping link: not a file: https://pypi.org/simple/cas-tools/ 2023-12-08T12:11:50,149 Given no hashes to check 1 links for project 'cas-tools': discarding no candidates 2023-12-08T12:11:50,167 Collecting cas-tools==0.0.1.dev2 2023-12-08T12:11:50,169 Created temporary directory: /tmp/pip-unpack-agqrebqe 2023-12-08T12:11:50,380 Downloading cas-tools-0.0.1.dev2.tar.gz (11 kB) 2023-12-08T12:11:50,419 Added cas-tools==0.0.1.dev2 from https://files.pythonhosted.org/packages/8b/08/a7b6ef7b2d95e0c54aecb418b2d9659844b67aa83fdfebe6ea61e276a64d/cas-tools-0.0.1.dev2.tar.gz to build tracker '/tmp/pip-build-tracker-gl5n781h' 2023-12-08T12:11:50,421 Running setup.py (path:/tmp/pip-wheel-ibitygaf/cas-tools_348ca6ad3cef4bdcb65e9f9f4f249ca9/setup.py) egg_info for package cas-tools 2023-12-08T12:11:50,422 Created temporary directory: /tmp/pip-pip-egg-info-88pegccq 2023-12-08T12:11:50,422 Preparing metadata (setup.py): started 2023-12-08T12:11:50,424 Running command python setup.py egg_info 2023-12-08T12:11:51,406 running egg_info 2023-12-08T12:11:51,407 creating /tmp/pip-pip-egg-info-88pegccq/cas_tools.egg-info 2023-12-08T12:11:51,431 writing /tmp/pip-pip-egg-info-88pegccq/cas_tools.egg-info/PKG-INFO 2023-12-08T12:11:51,434 writing dependency_links to /tmp/pip-pip-egg-info-88pegccq/cas_tools.egg-info/dependency_links.txt 2023-12-08T12:11:51,435 writing entry points to /tmp/pip-pip-egg-info-88pegccq/cas_tools.egg-info/entry_points.txt 2023-12-08T12:11:51,437 writing requirements to /tmp/pip-pip-egg-info-88pegccq/cas_tools.egg-info/requires.txt 2023-12-08T12:11:51,438 writing top-level names to /tmp/pip-pip-egg-info-88pegccq/cas_tools.egg-info/top_level.txt 2023-12-08T12:11:51,440 writing manifest file '/tmp/pip-pip-egg-info-88pegccq/cas_tools.egg-info/SOURCES.txt' 2023-12-08T12:11:51,513 reading manifest file '/tmp/pip-pip-egg-info-88pegccq/cas_tools.egg-info/SOURCES.txt' 2023-12-08T12:11:51,516 writing manifest file '/tmp/pip-pip-egg-info-88pegccq/cas_tools.egg-info/SOURCES.txt' 2023-12-08T12:11:51,622 Preparing metadata (setup.py): finished with status 'done' 2023-12-08T12:11:51,626 Source in /tmp/pip-wheel-ibitygaf/cas-tools_348ca6ad3cef4bdcb65e9f9f4f249ca9 has version 0.0.1.dev2, which satisfies requirement cas-tools==0.0.1.dev2 from https://files.pythonhosted.org/packages/8b/08/a7b6ef7b2d95e0c54aecb418b2d9659844b67aa83fdfebe6ea61e276a64d/cas-tools-0.0.1.dev2.tar.gz 2023-12-08T12:11:51,627 Removed cas-tools==0.0.1.dev2 from https://files.pythonhosted.org/packages/8b/08/a7b6ef7b2d95e0c54aecb418b2d9659844b67aa83fdfebe6ea61e276a64d/cas-tools-0.0.1.dev2.tar.gz from build tracker '/tmp/pip-build-tracker-gl5n781h' 2023-12-08T12:11:51,631 Created temporary directory: /tmp/pip-unpack-l5x96qw_ 2023-12-08T12:11:51,632 Created temporary directory: /tmp/pip-unpack-rtgol44b 2023-12-08T12:11:51,640 Building wheels for collected packages: cas-tools 2023-12-08T12:11:51,644 Created temporary directory: /tmp/pip-wheel-0tiakqng 2023-12-08T12:11:51,644 Building wheel for cas-tools (setup.py): started 2023-12-08T12:11:51,646 Destination directory: /tmp/pip-wheel-0tiakqng 2023-12-08T12:11:51,646 Running command python setup.py bdist_wheel 2023-12-08T12:11:52,616 running bdist_wheel 2023-12-08T12:11:52,708 running build 2023-12-08T12:11:52,709 running build_py 2023-12-08T12:11:52,735 creating build 2023-12-08T12:11:52,736 creating build/lib 2023-12-08T12:11:52,736 creating build/lib/cas 2023-12-08T12:11:52,738 copying src/cas/reports.py -> build/lib/cas 2023-12-08T12:11:52,740 copying src/cas/__init__.py -> build/lib/cas 2023-12-08T12:11:52,741 copying src/cas/file_utils.py -> build/lib/cas 2023-12-08T12:11:52,743 copying src/cas/model.py -> build/lib/cas 2023-12-08T12:11:52,745 copying src/cas/__main__.py -> build/lib/cas 2023-12-08T12:11:52,748 copying src/cas/flatten_data_to_anndata.py -> build/lib/cas 2023-12-08T12:11:52,749 copying src/cas/anndata_conversion.py -> build/lib/cas 2023-12-08T12:11:52,751 running egg_info 2023-12-08T12:11:52,805 writing src/cas_tools.egg-info/PKG-INFO 2023-12-08T12:11:52,807 writing dependency_links to src/cas_tools.egg-info/dependency_links.txt 2023-12-08T12:11:52,809 writing entry points to src/cas_tools.egg-info/entry_points.txt 2023-12-08T12:11:52,810 writing requirements to src/cas_tools.egg-info/requires.txt 2023-12-08T12:11:52,811 writing top-level names to src/cas_tools.egg-info/top_level.txt 2023-12-08T12:11:52,839 reading manifest file 'src/cas_tools.egg-info/SOURCES.txt' 2023-12-08T12:11:52,842 writing manifest file 'src/cas_tools.egg-info/SOURCES.txt' 2023-12-08T12:11:52,868 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-12-08T12:11:52,868 !! 2023-12-08T12:11:52,869 ******************************************************************************** 2023-12-08T12:11:52,870 Please avoid running ``setup.py`` directly. 2023-12-08T12:11:52,871 Instead, use pypa/build, pypa/installer or other 2023-12-08T12:11:52,871 standards-based tools. 2023-12-08T12:11:52,873 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-12-08T12:11:52,873 ******************************************************************************** 2023-12-08T12:11:52,875 !! 2023-12-08T12:11:52,875 self.initialize_options() 2023-12-08T12:11:52,892 installing to build/bdist.linux-armv7l/wheel 2023-12-08T12:11:52,893 running install 2023-12-08T12:11:52,916 running install_lib 2023-12-08T12:11:52,940 creating build/bdist.linux-armv7l 2023-12-08T12:11:52,941 creating build/bdist.linux-armv7l/wheel 2023-12-08T12:11:52,943 creating build/bdist.linux-armv7l/wheel/cas 2023-12-08T12:11:52,943 copying build/lib/cas/reports.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T12:11:52,945 copying build/lib/cas/__init__.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T12:11:52,947 copying build/lib/cas/file_utils.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T12:11:52,949 copying build/lib/cas/model.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T12:11:52,951 copying build/lib/cas/__main__.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T12:11:52,953 copying build/lib/cas/flatten_data_to_anndata.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T12:11:52,955 copying build/lib/cas/anndata_conversion.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T12:11:52,957 running install_egg_info 2023-12-08T12:11:52,986 Copying src/cas_tools.egg-info to build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev2-py3.11.egg-info 2023-12-08T12:11:52,996 running install_scripts 2023-12-08T12:11:53,010 creating build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev2.dist-info/WHEEL 2023-12-08T12:11:53,012 creating '/tmp/pip-wheel-0tiakqng/cas_tools-0.0.1.dev2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-08T12:11:53,015 adding 'cas/__init__.py' 2023-12-08T12:11:53,016 adding 'cas/__main__.py' 2023-12-08T12:11:53,018 adding 'cas/anndata_conversion.py' 2023-12-08T12:11:53,019 adding 'cas/file_utils.py' 2023-12-08T12:11:53,021 adding 'cas/flatten_data_to_anndata.py' 2023-12-08T12:11:53,023 adding 'cas/model.py' 2023-12-08T12:11:53,024 adding 'cas/reports.py' 2023-12-08T12:11:53,027 adding 'cas_tools-0.0.1.dev2.dist-info/METADATA' 2023-12-08T12:11:53,028 adding 'cas_tools-0.0.1.dev2.dist-info/WHEEL' 2023-12-08T12:11:53,028 adding 'cas_tools-0.0.1.dev2.dist-info/entry_points.txt' 2023-12-08T12:11:53,029 adding 'cas_tools-0.0.1.dev2.dist-info/top_level.txt' 2023-12-08T12:11:53,030 adding 'cas_tools-0.0.1.dev2.dist-info/RECORD' 2023-12-08T12:11:53,031 removing build/bdist.linux-armv7l/wheel 2023-12-08T12:11:53,144 Building wheel for cas-tools (setup.py): finished with status 'done' 2023-12-08T12:11:53,147 Created wheel for cas-tools: filename=cas_tools-0.0.1.dev2-py3-none-any.whl size=12579 sha256=2befe7822c5dcdf4c1c1c1041bea4b8ff79fdba77c1a19dfd2655d8e05ede19f 2023-12-08T12:11:53,148 Stored in directory: /tmp/pip-ephem-wheel-cache-esldp2vx/wheels/62/e0/e7/0023a6b3e56773ef5346930f4a77288fda17c14899756f5570 2023-12-08T12:11:53,157 Successfully built cas-tools 2023-12-08T12:11:53,161 Removed build tracker: '/tmp/pip-build-tracker-gl5n781h'