2023-12-08T17:50:31,140 Created temporary directory: /tmp/pip-build-tracker-2mawi1hc 2023-12-08T17:50:31,141 Initialized build tracking at /tmp/pip-build-tracker-2mawi1hc 2023-12-08T17:50:31,141 Created build tracker: /tmp/pip-build-tracker-2mawi1hc 2023-12-08T17:50:31,142 Entered build tracker: /tmp/pip-build-tracker-2mawi1hc 2023-12-08T17:50:31,143 Created temporary directory: /tmp/pip-wheel-l56t_577 2023-12-08T17:50:31,146 Created temporary directory: /tmp/pip-ephem-wheel-cache-kcpkvwm6 2023-12-08T17:50:31,170 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-08T17:50:31,174 2 location(s) to search for versions of cas-tools: 2023-12-08T17:50:31,174 * https://pypi.org/simple/cas-tools/ 2023-12-08T17:50:31,174 * https://www.piwheels.org/simple/cas-tools/ 2023-12-08T17:50:31,175 Fetching project page and analyzing links: https://pypi.org/simple/cas-tools/ 2023-12-08T17:50:31,175 Getting page https://pypi.org/simple/cas-tools/ 2023-12-08T17:50:31,177 Found index url https://pypi.org/simple/ 2023-12-08T17:50:31,385 Fetched page https://pypi.org/simple/cas-tools/ as application/vnd.pypi.simple.v1+json 2023-12-08T17:50:31,387 Found link https://files.pythonhosted.org/packages/39/25/84ad8f63a94c6504874dc8b8952559a8173e31c44d7085681005874aaaec/cas-tools-0.0.1.dev1.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev1 2023-12-08T17:50:31,388 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/e7/15/c3d6bdb34ca613e297547d37a7d1500eb43dd369b4086bdf2564fb8abce8/cas_tools-0.0.1.dev1-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-08T17:50:31,389 Found link https://files.pythonhosted.org/packages/8b/08/a7b6ef7b2d95e0c54aecb418b2d9659844b67aa83fdfebe6ea61e276a64d/cas-tools-0.0.1.dev2.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev2 2023-12-08T17:50:31,389 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/08/9b/16ebcd2b8da3b0b0ca1000a97c32d40ded9b724fef4deecc5ff6a6121c26/cas_tools-0.0.1.dev2-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-08T17:50:31,390 Found link https://files.pythonhosted.org/packages/f2/fd/47959f06131aa2719e7f23e8f7a717b352712324361eb34cd0123eccb913/cas-tools-0.0.1.dev3.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev3 2023-12-08T17:50:31,391 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/38/43/db7f7e682c3100d5228b1cd6bb12ec5d6c1ed4d1413ff9e7af0b9d6c01c1/cas_tools-0.0.1.dev3-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-08T17:50:31,391 Fetching project page and analyzing links: https://www.piwheels.org/simple/cas-tools/ 2023-12-08T17:50:31,392 Getting page https://www.piwheels.org/simple/cas-tools/ 2023-12-08T17:50:31,393 Found index url https://www.piwheels.org/simple/ 2023-12-08T17:50:31,554 Fetched page https://www.piwheels.org/simple/cas-tools/ as text/html 2023-12-08T17:50:31,556 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev2-py3-none-any.whl#sha256=2befe7822c5dcdf4c1c1c1041bea4b8ff79fdba77c1a19dfd2655d8e05ede19f (from https://www.piwheels.org/simple/cas-tools/) 2023-12-08T17:50:31,557 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev1-py3-none-any.whl#sha256=44c420d45db20626cfaa3e67b0fac798db383ceeda7559e02131debe0722a092 (from https://www.piwheels.org/simple/cas-tools/) 2023-12-08T17:50:31,558 Skipping link: not a file: https://www.piwheels.org/simple/cas-tools/ 2023-12-08T17:50:31,558 Skipping link: not a file: https://pypi.org/simple/cas-tools/ 2023-12-08T17:50:31,577 Given no hashes to check 1 links for project 'cas-tools': discarding no candidates 2023-12-08T17:50:31,595 Collecting cas-tools==0.0.1.dev3 2023-12-08T17:50:31,598 Created temporary directory: /tmp/pip-unpack-jeltqcrx 2023-12-08T17:50:31,802 Downloading cas-tools-0.0.1.dev3.tar.gz (13 kB) 2023-12-08T17:50:31,843 Added cas-tools==0.0.1.dev3 from https://files.pythonhosted.org/packages/f2/fd/47959f06131aa2719e7f23e8f7a717b352712324361eb34cd0123eccb913/cas-tools-0.0.1.dev3.tar.gz to build tracker '/tmp/pip-build-tracker-2mawi1hc' 2023-12-08T17:50:31,844 Running setup.py (path:/tmp/pip-wheel-l56t_577/cas-tools_051d6c46154b4931bf166375f3cb3843/setup.py) egg_info for package cas-tools 2023-12-08T17:50:31,846 Created temporary directory: /tmp/pip-pip-egg-info-ubek5b36 2023-12-08T17:50:31,846 Preparing metadata (setup.py): started 2023-12-08T17:50:31,848 Running command python setup.py egg_info 2023-12-08T17:50:32,830 running egg_info 2023-12-08T17:50:32,832 creating /tmp/pip-pip-egg-info-ubek5b36/cas_tools.egg-info 2023-12-08T17:50:32,855 writing /tmp/pip-pip-egg-info-ubek5b36/cas_tools.egg-info/PKG-INFO 2023-12-08T17:50:32,859 writing dependency_links to /tmp/pip-pip-egg-info-ubek5b36/cas_tools.egg-info/dependency_links.txt 2023-12-08T17:50:32,860 writing entry points to /tmp/pip-pip-egg-info-ubek5b36/cas_tools.egg-info/entry_points.txt 2023-12-08T17:50:32,862 writing requirements to /tmp/pip-pip-egg-info-ubek5b36/cas_tools.egg-info/requires.txt 2023-12-08T17:50:32,863 writing top-level names to /tmp/pip-pip-egg-info-ubek5b36/cas_tools.egg-info/top_level.txt 2023-12-08T17:50:32,865 writing manifest file '/tmp/pip-pip-egg-info-ubek5b36/cas_tools.egg-info/SOURCES.txt' 2023-12-08T17:50:32,939 reading manifest file '/tmp/pip-pip-egg-info-ubek5b36/cas_tools.egg-info/SOURCES.txt' 2023-12-08T17:50:32,943 writing manifest file '/tmp/pip-pip-egg-info-ubek5b36/cas_tools.egg-info/SOURCES.txt' 2023-12-08T17:50:33,050 Preparing metadata (setup.py): finished with status 'done' 2023-12-08T17:50:33,054 Source in /tmp/pip-wheel-l56t_577/cas-tools_051d6c46154b4931bf166375f3cb3843 has version 0.0.1.dev3, which satisfies requirement cas-tools==0.0.1.dev3 from https://files.pythonhosted.org/packages/f2/fd/47959f06131aa2719e7f23e8f7a717b352712324361eb34cd0123eccb913/cas-tools-0.0.1.dev3.tar.gz 2023-12-08T17:50:33,055 Removed cas-tools==0.0.1.dev3 from https://files.pythonhosted.org/packages/f2/fd/47959f06131aa2719e7f23e8f7a717b352712324361eb34cd0123eccb913/cas-tools-0.0.1.dev3.tar.gz from build tracker '/tmp/pip-build-tracker-2mawi1hc' 2023-12-08T17:50:33,059 Created temporary directory: /tmp/pip-unpack-r09kqz2o 2023-12-08T17:50:33,060 Created temporary directory: /tmp/pip-unpack-gg_hhlxl 2023-12-08T17:50:33,070 Building wheels for collected packages: cas-tools 2023-12-08T17:50:33,074 Created temporary directory: /tmp/pip-wheel-i1ywhi_9 2023-12-08T17:50:33,075 Building wheel for cas-tools (setup.py): started 2023-12-08T17:50:33,076 Destination directory: /tmp/pip-wheel-i1ywhi_9 2023-12-08T17:50:33,077 Running command python setup.py bdist_wheel 2023-12-08T17:50:34,062 running bdist_wheel 2023-12-08T17:50:34,160 running build 2023-12-08T17:50:34,160 running build_py 2023-12-08T17:50:34,187 creating build 2023-12-08T17:50:34,188 creating build/lib 2023-12-08T17:50:34,189 creating build/lib/cas 2023-12-08T17:50:34,190 copying src/cas/flatten_data_to_anndata.py -> build/lib/cas 2023-12-08T17:50:34,192 copying src/cas/anndata_conversion.py -> build/lib/cas 2023-12-08T17:50:34,194 copying src/cas/__init__.py -> build/lib/cas 2023-12-08T17:50:34,195 copying src/cas/__main__.py -> build/lib/cas 2023-12-08T17:50:34,198 copying src/cas/file_utils.py -> build/lib/cas 2023-12-08T17:50:34,200 copying src/cas/flatten_data_to_tables.py -> build/lib/cas 2023-12-08T17:50:34,202 copying src/cas/model.py -> build/lib/cas 2023-12-08T17:50:34,204 running egg_info 2023-12-08T17:50:34,259 writing src/cas_tools.egg-info/PKG-INFO 2023-12-08T17:50:34,262 writing dependency_links to src/cas_tools.egg-info/dependency_links.txt 2023-12-08T17:50:34,264 writing entry points to src/cas_tools.egg-info/entry_points.txt 2023-12-08T17:50:34,265 writing requirements to src/cas_tools.egg-info/requires.txt 2023-12-08T17:50:34,267 writing top-level names to src/cas_tools.egg-info/top_level.txt 2023-12-08T17:50:34,293 reading manifest file 'src/cas_tools.egg-info/SOURCES.txt' 2023-12-08T17:50:34,297 writing manifest file 'src/cas_tools.egg-info/SOURCES.txt' 2023-12-08T17:50:34,323 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-12-08T17:50:34,324 !! 2023-12-08T17:50:34,325 ******************************************************************************** 2023-12-08T17:50:34,325 Please avoid running ``setup.py`` directly. 2023-12-08T17:50:34,326 Instead, use pypa/build, pypa/installer or other 2023-12-08T17:50:34,326 standards-based tools. 2023-12-08T17:50:34,327 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-12-08T17:50:34,328 ******************************************************************************** 2023-12-08T17:50:34,328 !! 2023-12-08T17:50:34,329 self.initialize_options() 2023-12-08T17:50:34,351 installing to build/bdist.linux-armv7l/wheel 2023-12-08T17:50:34,352 running install 2023-12-08T17:50:34,375 running install_lib 2023-12-08T17:50:34,399 creating build/bdist.linux-armv7l 2023-12-08T17:50:34,400 creating build/bdist.linux-armv7l/wheel 2023-12-08T17:50:34,401 creating build/bdist.linux-armv7l/wheel/cas 2023-12-08T17:50:34,403 copying build/lib/cas/flatten_data_to_anndata.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T17:50:34,405 copying build/lib/cas/anndata_conversion.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T17:50:34,407 copying build/lib/cas/__init__.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T17:50:34,408 copying build/lib/cas/__main__.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T17:50:34,410 copying build/lib/cas/file_utils.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T17:50:34,412 copying build/lib/cas/flatten_data_to_tables.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T17:50:34,415 copying build/lib/cas/model.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-08T17:50:34,417 running install_egg_info 2023-12-08T17:50:34,446 Copying src/cas_tools.egg-info to build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev3-py3.11.egg-info 2023-12-08T17:50:34,456 running install_scripts 2023-12-08T17:50:34,470 creating build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev3.dist-info/WHEEL 2023-12-08T17:50:34,472 creating '/tmp/pip-wheel-i1ywhi_9/cas_tools-0.0.1.dev3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-08T17:50:34,474 adding 'cas/__init__.py' 2023-12-08T17:50:34,476 adding 'cas/__main__.py' 2023-12-08T17:50:34,477 adding 'cas/anndata_conversion.py' 2023-12-08T17:50:34,479 adding 'cas/file_utils.py' 2023-12-08T17:50:34,480 adding 'cas/flatten_data_to_anndata.py' 2023-12-08T17:50:34,482 adding 'cas/flatten_data_to_tables.py' 2023-12-08T17:50:34,484 adding 'cas/model.py' 2023-12-08T17:50:34,487 adding 'cas_tools-0.0.1.dev3.dist-info/METADATA' 2023-12-08T17:50:34,487 adding 'cas_tools-0.0.1.dev3.dist-info/WHEEL' 2023-12-08T17:50:34,488 adding 'cas_tools-0.0.1.dev3.dist-info/entry_points.txt' 2023-12-08T17:50:34,489 adding 'cas_tools-0.0.1.dev3.dist-info/top_level.txt' 2023-12-08T17:50:34,490 adding 'cas_tools-0.0.1.dev3.dist-info/RECORD' 2023-12-08T17:50:34,491 removing build/bdist.linux-armv7l/wheel 2023-12-08T17:50:34,605 Building wheel for cas-tools (setup.py): finished with status 'done' 2023-12-08T17:50:34,608 Created wheel for cas-tools: filename=cas_tools-0.0.1.dev3-py3-none-any.whl size=14339 sha256=abf7a34cd83393262dd0c884c087f0578be24c49c3c6b7f70d97a5370a799502 2023-12-08T17:50:34,609 Stored in directory: /tmp/pip-ephem-wheel-cache-kcpkvwm6/wheels/30/c4/f8/b845297d4f89292df4f63b2e35e77a2eb168491cd9641f98b4 2023-12-08T17:50:34,618 Successfully built cas-tools 2023-12-08T17:50:34,622 Removed build tracker: '/tmp/pip-build-tracker-2mawi1hc'