2023-12-10T02:42:12,395 Created temporary directory: /tmp/pip-build-tracker-gjfrrzgt
2023-12-10T02:42:12,396 Initialized build tracking at /tmp/pip-build-tracker-gjfrrzgt
2023-12-10T02:42:12,396 Created build tracker: /tmp/pip-build-tracker-gjfrrzgt
2023-12-10T02:42:12,397 Entered build tracker: /tmp/pip-build-tracker-gjfrrzgt
2023-12-10T02:42:12,398 Created temporary directory: /tmp/pip-wheel-lpy5v1pd
2023-12-10T02:42:12,401 Created temporary directory: /tmp/pip-ephem-wheel-cache-ge6w8je1
2023-12-10T02:42:12,424 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-10T02:42:12,427 2 location(s) to search for versions of cas-tools:
2023-12-10T02:42:12,427 * https://pypi.org/simple/cas-tools/
2023-12-10T02:42:12,427 * https://www.piwheels.org/simple/cas-tools/
2023-12-10T02:42:12,428 Fetching project page and analyzing links: https://pypi.org/simple/cas-tools/
2023-12-10T02:42:12,429 Getting page https://pypi.org/simple/cas-tools/
2023-12-10T02:42:12,430 Found index url https://pypi.org/simple/
2023-12-10T02:42:12,566 Fetched page https://pypi.org/simple/cas-tools/ as application/vnd.pypi.simple.v1+json
2023-12-10T02:42:12,568   Found link https://files.pythonhosted.org/packages/39/25/84ad8f63a94c6504874dc8b8952559a8173e31c44d7085681005874aaaec/cas-tools-0.0.1.dev1.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev1
2023-12-10T02:42:12,569   Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/e7/15/c3d6bdb34ca613e297547d37a7d1500eb43dd369b4086bdf2564fb8abce8/cas_tools-0.0.1.dev1-py3-none-any.whl (from https://pypi.org/simple/cas-tools/)
2023-12-10T02:42:12,570   Found link https://files.pythonhosted.org/packages/8b/08/a7b6ef7b2d95e0c54aecb418b2d9659844b67aa83fdfebe6ea61e276a64d/cas-tools-0.0.1.dev2.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev2
2023-12-10T02:42:12,570   Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/08/9b/16ebcd2b8da3b0b0ca1000a97c32d40ded9b724fef4deecc5ff6a6121c26/cas_tools-0.0.1.dev2-py3-none-any.whl (from https://pypi.org/simple/cas-tools/)
2023-12-10T02:42:12,571   Found link https://files.pythonhosted.org/packages/f2/fd/47959f06131aa2719e7f23e8f7a717b352712324361eb34cd0123eccb913/cas-tools-0.0.1.dev3.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev3
2023-12-10T02:42:12,572   Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/38/43/db7f7e682c3100d5228b1cd6bb12ec5d6c1ed4d1413ff9e7af0b9d6c01c1/cas_tools-0.0.1.dev3-py3-none-any.whl (from https://pypi.org/simple/cas-tools/)
2023-12-10T02:42:12,572   Found link https://files.pythonhosted.org/packages/5b/59/a17368c4058f72bb2058ee66924fed3e3bd76d7d080bde1930e5e9a916f3/cas-tools-0.0.1.dev4.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev4
2023-12-10T02:42:12,573   Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/20/02/ebab61043190922d625bc6b41c2404962077e3b2813832ccec36959ae39c/cas_tools-0.0.1.dev4-py3-none-any.whl (from https://pypi.org/simple/cas-tools/)
2023-12-10T02:42:12,574 Fetching project page and analyzing links: https://www.piwheels.org/simple/cas-tools/
2023-12-10T02:42:12,574 Getting page https://www.piwheels.org/simple/cas-tools/
2023-12-10T02:42:12,576 Found index url https://www.piwheels.org/simple/
2023-12-10T02:42:12,732 Fetched page https://www.piwheels.org/simple/cas-tools/ as text/html
2023-12-10T02:42:12,734   Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev3-py3-none-any.whl#sha256=abf7a34cd83393262dd0c884c087f0578be24c49c3c6b7f70d97a5370a799502 (from https://www.piwheels.org/simple/cas-tools/)
2023-12-10T02:42:12,734   Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev2-py3-none-any.whl#sha256=2befe7822c5dcdf4c1c1c1041bea4b8ff79fdba77c1a19dfd2655d8e05ede19f (from https://www.piwheels.org/simple/cas-tools/)
2023-12-10T02:42:12,735   Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev1-py3-none-any.whl#sha256=44c420d45db20626cfaa3e67b0fac798db383ceeda7559e02131debe0722a092 (from https://www.piwheels.org/simple/cas-tools/)
2023-12-10T02:42:12,736 Skipping link: not a file: https://www.piwheels.org/simple/cas-tools/
2023-12-10T02:42:12,737 Skipping link: not a file: https://pypi.org/simple/cas-tools/
2023-12-10T02:42:12,755 Given no hashes to check 1 links for project 'cas-tools': discarding no candidates
2023-12-10T02:42:12,773 Collecting cas-tools==0.0.1.dev4
2023-12-10T02:42:12,775   Created temporary directory: /tmp/pip-unpack-25ixtlaf
2023-12-10T02:42:12,986   Downloading cas-tools-0.0.1.dev4.tar.gz (14 kB)
2023-12-10T02:42:13,028   Added cas-tools==0.0.1.dev4 from https://files.pythonhosted.org/packages/5b/59/a17368c4058f72bb2058ee66924fed3e3bd76d7d080bde1930e5e9a916f3/cas-tools-0.0.1.dev4.tar.gz to build tracker '/tmp/pip-build-tracker-gjfrrzgt'
2023-12-10T02:42:13,030   Running setup.py (path:/tmp/pip-wheel-lpy5v1pd/cas-tools_e426bd099def435b91af227e71b574f7/setup.py) egg_info for package cas-tools
2023-12-10T02:42:13,030   Created temporary directory: /tmp/pip-pip-egg-info-unfnjfeu
2023-12-10T02:42:13,031   Preparing metadata (setup.py): started
2023-12-10T02:42:13,032   Running command python setup.py egg_info
2023-12-10T02:42:14,045   running egg_info
2023-12-10T02:42:14,046   creating /tmp/pip-pip-egg-info-unfnjfeu/cas_tools.egg-info
2023-12-10T02:42:14,070   writing /tmp/pip-pip-egg-info-unfnjfeu/cas_tools.egg-info/PKG-INFO
2023-12-10T02:42:14,073   writing dependency_links to /tmp/pip-pip-egg-info-unfnjfeu/cas_tools.egg-info/dependency_links.txt
2023-12-10T02:42:14,074   writing entry points to /tmp/pip-pip-egg-info-unfnjfeu/cas_tools.egg-info/entry_points.txt
2023-12-10T02:42:14,076   writing requirements to /tmp/pip-pip-egg-info-unfnjfeu/cas_tools.egg-info/requires.txt
2023-12-10T02:42:14,077   writing top-level names to /tmp/pip-pip-egg-info-unfnjfeu/cas_tools.egg-info/top_level.txt
2023-12-10T02:42:14,078   writing manifest file '/tmp/pip-pip-egg-info-unfnjfeu/cas_tools.egg-info/SOURCES.txt'
2023-12-10T02:42:14,153   reading manifest file '/tmp/pip-pip-egg-info-unfnjfeu/cas_tools.egg-info/SOURCES.txt'
2023-12-10T02:42:14,156   writing manifest file '/tmp/pip-pip-egg-info-unfnjfeu/cas_tools.egg-info/SOURCES.txt'
2023-12-10T02:42:14,262   Preparing metadata (setup.py): finished with status 'done'
2023-12-10T02:42:14,266   Source in /tmp/pip-wheel-lpy5v1pd/cas-tools_e426bd099def435b91af227e71b574f7 has version 0.0.1.dev4, which satisfies requirement cas-tools==0.0.1.dev4 from https://files.pythonhosted.org/packages/5b/59/a17368c4058f72bb2058ee66924fed3e3bd76d7d080bde1930e5e9a916f3/cas-tools-0.0.1.dev4.tar.gz
2023-12-10T02:42:14,267   Removed cas-tools==0.0.1.dev4 from https://files.pythonhosted.org/packages/5b/59/a17368c4058f72bb2058ee66924fed3e3bd76d7d080bde1930e5e9a916f3/cas-tools-0.0.1.dev4.tar.gz from build tracker '/tmp/pip-build-tracker-gjfrrzgt'
2023-12-10T02:42:14,271 Created temporary directory: /tmp/pip-unpack-j38yxsd0
2023-12-10T02:42:14,272 Created temporary directory: /tmp/pip-unpack-8qdxpm4t
2023-12-10T02:42:14,282 Building wheels for collected packages: cas-tools
2023-12-10T02:42:14,286   Created temporary directory: /tmp/pip-wheel-qo3e84jc
2023-12-10T02:42:14,287   Building wheel for cas-tools (setup.py): started
2023-12-10T02:42:14,288   Destination directory: /tmp/pip-wheel-qo3e84jc
2023-12-10T02:42:14,289   Running command python setup.py bdist_wheel
2023-12-10T02:42:15,253   running bdist_wheel
2023-12-10T02:42:15,343   running build
2023-12-10T02:42:15,344   running build_py
2023-12-10T02:42:15,370   creating build
2023-12-10T02:42:15,370   creating build/lib
2023-12-10T02:42:15,371   creating build/lib/cas
2023-12-10T02:42:15,372   copying src/cas/flatten_data_to_tables.py -> build/lib/cas
2023-12-10T02:42:15,375   copying src/cas/__init__.py -> build/lib/cas
2023-12-10T02:42:15,376   copying src/cas/file_utils.py -> build/lib/cas
2023-12-10T02:42:15,378   copying src/cas/populate_cell_ids.py -> build/lib/cas
2023-12-10T02:42:15,380   copying src/cas/model.py -> build/lib/cas
2023-12-10T02:42:15,383   copying src/cas/__main__.py -> build/lib/cas
2023-12-10T02:42:15,384   copying src/cas/flatten_data_to_anndata.py -> build/lib/cas
2023-12-10T02:42:15,387   copying src/cas/anndata_conversion.py -> build/lib/cas
2023-12-10T02:42:15,388   running egg_info
2023-12-10T02:42:15,441   writing src/cas_tools.egg-info/PKG-INFO
2023-12-10T02:42:15,444   writing dependency_links to src/cas_tools.egg-info/dependency_links.txt
2023-12-10T02:42:15,446   writing entry points to src/cas_tools.egg-info/entry_points.txt
2023-12-10T02:42:15,447   writing requirements to src/cas_tools.egg-info/requires.txt
2023-12-10T02:42:15,448   writing top-level names to src/cas_tools.egg-info/top_level.txt
2023-12-10T02:42:15,474   reading manifest file 'src/cas_tools.egg-info/SOURCES.txt'
2023-12-10T02:42:15,478   writing manifest file 'src/cas_tools.egg-info/SOURCES.txt'
2023-12-10T02:42:15,503   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-12-10T02:42:15,504   !!

2023-12-10T02:42:15,505           ********************************************************************************
2023-12-10T02:42:15,505           Please avoid running ``setup.py`` directly.
2023-12-10T02:42:15,505           Instead, use pypa/build, pypa/installer or other
2023-12-10T02:42:15,506           standards-based tools.

2023-12-10T02:42:15,507           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-12-10T02:42:15,507           ********************************************************************************

2023-12-10T02:42:15,508   !!
2023-12-10T02:42:15,509     self.initialize_options()
2023-12-10T02:42:15,528   installing to build/bdist.linux-armv7l/wheel
2023-12-10T02:42:15,528   running install
2023-12-10T02:42:15,552   running install_lib
2023-12-10T02:42:15,575   creating build/bdist.linux-armv7l
2023-12-10T02:42:15,575   creating build/bdist.linux-armv7l/wheel
2023-12-10T02:42:15,577   creating build/bdist.linux-armv7l/wheel/cas
2023-12-10T02:42:15,578   copying build/lib/cas/flatten_data_to_tables.py -> build/bdist.linux-armv7l/wheel/cas
2023-12-10T02:42:15,580   copying build/lib/cas/__init__.py -> build/bdist.linux-armv7l/wheel/cas
2023-12-10T02:42:15,581   copying build/lib/cas/file_utils.py -> build/bdist.linux-armv7l/wheel/cas
2023-12-10T02:42:15,583   copying build/lib/cas/populate_cell_ids.py -> build/bdist.linux-armv7l/wheel/cas
2023-12-10T02:42:15,585   copying build/lib/cas/model.py -> build/bdist.linux-armv7l/wheel/cas
2023-12-10T02:42:15,587   copying build/lib/cas/__main__.py -> build/bdist.linux-armv7l/wheel/cas
2023-12-10T02:42:15,589   copying build/lib/cas/flatten_data_to_anndata.py -> build/bdist.linux-armv7l/wheel/cas
2023-12-10T02:42:15,592   copying build/lib/cas/anndata_conversion.py -> build/bdist.linux-armv7l/wheel/cas
2023-12-10T02:42:15,593   running install_egg_info
2023-12-10T02:42:15,623   Copying src/cas_tools.egg-info to build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev4-py3.11.egg-info
2023-12-10T02:42:15,635   running install_scripts
2023-12-10T02:42:15,649   creating build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev4.dist-info/WHEEL
2023-12-10T02:42:15,652   creating '/tmp/pip-wheel-qo3e84jc/cas_tools-0.0.1.dev4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-12-10T02:42:15,654   adding 'cas/__init__.py'
2023-12-10T02:42:15,656   adding 'cas/__main__.py'
2023-12-10T02:42:15,657   adding 'cas/anndata_conversion.py'
2023-12-10T02:42:15,659   adding 'cas/file_utils.py'
2023-12-10T02:42:15,661   adding 'cas/flatten_data_to_anndata.py'
2023-12-10T02:42:15,662   adding 'cas/flatten_data_to_tables.py'
2023-12-10T02:42:15,664   adding 'cas/model.py'
2023-12-10T02:42:15,666   adding 'cas/populate_cell_ids.py'
2023-12-10T02:42:15,668   adding 'cas_tools-0.0.1.dev4.dist-info/METADATA'
2023-12-10T02:42:15,669   adding 'cas_tools-0.0.1.dev4.dist-info/WHEEL'
2023-12-10T02:42:15,670   adding 'cas_tools-0.0.1.dev4.dist-info/entry_points.txt'
2023-12-10T02:42:15,671   adding 'cas_tools-0.0.1.dev4.dist-info/top_level.txt'
2023-12-10T02:42:15,672   adding 'cas_tools-0.0.1.dev4.dist-info/RECORD'
2023-12-10T02:42:15,674   removing build/bdist.linux-armv7l/wheel
2023-12-10T02:42:15,787   Building wheel for cas-tools (setup.py): finished with status 'done'
2023-12-10T02:42:15,789   Created wheel for cas-tools: filename=cas_tools-0.0.1.dev4-py3-none-any.whl size=15840 sha256=884485f1e67d6bcfc0781f3645378fcef01d605eab258622c0291a7d1e81b845
2023-12-10T02:42:15,791   Stored in directory: /tmp/pip-ephem-wheel-cache-ge6w8je1/wheels/7d/02/32/a183bd4def1f5a25e3da187d07a2d369cd1b8d490f7a97ce55
2023-12-10T02:42:15,800 Successfully built cas-tools
2023-12-10T02:42:15,803 Removed build tracker: '/tmp/pip-build-tracker-gjfrrzgt'