2023-12-13T21:51:32,028 Created temporary directory: /tmp/pip-build-tracker-mx048cjj 2023-12-13T21:51:32,029 Initialized build tracking at /tmp/pip-build-tracker-mx048cjj 2023-12-13T21:51:32,029 Created build tracker: /tmp/pip-build-tracker-mx048cjj 2023-12-13T21:51:32,030 Entered build tracker: /tmp/pip-build-tracker-mx048cjj 2023-12-13T21:51:32,030 Created temporary directory: /tmp/pip-wheel-ksqnu704 2023-12-13T21:51:32,034 Created temporary directory: /tmp/pip-ephem-wheel-cache-0c407wtc 2023-12-13T21:51:32,055 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-13T21:51:32,059 2 location(s) to search for versions of scunagi: 2023-12-13T21:51:32,059 * https://pypi.org/simple/scunagi/ 2023-12-13T21:51:32,059 * https://www.piwheels.org/simple/scunagi/ 2023-12-13T21:51:32,060 Fetching project page and analyzing links: https://pypi.org/simple/scunagi/ 2023-12-13T21:51:32,060 Getting page https://pypi.org/simple/scunagi/ 2023-12-13T21:51:32,062 Found index url https://pypi.org/simple/ 2023-12-13T21:51:32,194 Fetched page https://pypi.org/simple/scunagi/ as application/vnd.pypi.simple.v1+json 2023-12-13T21:51:32,196 Skipping link: No binaries permitted for scunagi: https://files.pythonhosted.org/packages/4e/47/f8eadc592806973940740a9417892ce5e870b13f3140d5462b6469f5df29/scUNAGI-0.1-py3-none-any.whl (from https://pypi.org/simple/scunagi/) 2023-12-13T21:51:32,197 Found link https://files.pythonhosted.org/packages/e1/f1/0de90828615ce729086b0bd0040d92816d065d709b8d4cf23aa83212bd12/scUNAGI-0.1.tar.gz (from https://pypi.org/simple/scunagi/), version: 0.1 2023-12-13T21:51:32,198 Skipping link: No binaries permitted for scunagi: https://files.pythonhosted.org/packages/a1/50/e3172e3800ea043d94ef312db9211b7ebe03d044709ca7ffe5bfe736765c/scUNAGI-0.2-py3-none-any.whl (from https://pypi.org/simple/scunagi/) 2023-12-13T21:51:32,198 Found link https://files.pythonhosted.org/packages/27/25/685283d6b4b5c35f39f23f234c4b69ceb58cfe44d5847fb370d65014efc7/scUNAGI-0.2.tar.gz (from https://pypi.org/simple/scunagi/), version: 0.2 2023-12-13T21:51:32,199 Fetching project page and analyzing links: https://www.piwheels.org/simple/scunagi/ 2023-12-13T21:51:32,200 Getting page https://www.piwheels.org/simple/scunagi/ 2023-12-13T21:51:32,201 Found index url https://www.piwheels.org/simple/ 2023-12-13T21:51:32,356 Fetched page https://www.piwheels.org/simple/scunagi/ as text/html 2023-12-13T21:51:32,358 Skipping link: No binaries permitted for scunagi: https://www.piwheels.org/simple/scunagi/scUNAGI-0.1-py3-none-any.whl#sha256=129a6ea06ac3e3c1826b3ac39feecff520c456e5688369ffda9c947f39b3a591 (from https://www.piwheels.org/simple/scunagi/) 2023-12-13T21:51:32,359 Skipping link: not a file: https://www.piwheels.org/simple/scunagi/ 2023-12-13T21:51:32,359 Skipping link: not a file: https://pypi.org/simple/scunagi/ 2023-12-13T21:51:32,377 Given no hashes to check 1 links for project 'scunagi': discarding no candidates 2023-12-13T21:51:32,395 Collecting scunagi==0.2 2023-12-13T21:51:32,398 Created temporary directory: /tmp/pip-unpack-2p5emxel 2023-12-13T21:51:32,608 Downloading scUNAGI-0.2.tar.gz (5.1 MB) 2023-12-13T21:51:34,565 Added scunagi==0.2 from https://files.pythonhosted.org/packages/27/25/685283d6b4b5c35f39f23f234c4b69ceb58cfe44d5847fb370d65014efc7/scUNAGI-0.2.tar.gz to build tracker '/tmp/pip-build-tracker-mx048cjj' 2023-12-13T21:51:34,567 Running setup.py (path:/tmp/pip-wheel-ksqnu704/scunagi_6c84e772132047f2a578ef134687124a/setup.py) egg_info for package scunagi 2023-12-13T21:51:34,568 Created temporary directory: /tmp/pip-pip-egg-info-poxw81vs 2023-12-13T21:51:34,569 Preparing metadata (setup.py): started 2023-12-13T21:51:34,570 Running command python setup.py egg_info 2023-12-13T21:51:35,575 running egg_info 2023-12-13T21:51:35,576 creating /tmp/pip-pip-egg-info-poxw81vs/scUNAGI.egg-info 2023-12-13T21:51:35,600 writing /tmp/pip-pip-egg-info-poxw81vs/scUNAGI.egg-info/PKG-INFO 2023-12-13T21:51:35,605 writing dependency_links to /tmp/pip-pip-egg-info-poxw81vs/scUNAGI.egg-info/dependency_links.txt 2023-12-13T21:51:35,607 writing requirements to /tmp/pip-pip-egg-info-poxw81vs/scUNAGI.egg-info/requires.txt 2023-12-13T21:51:35,609 writing top-level names to /tmp/pip-pip-egg-info-poxw81vs/scUNAGI.egg-info/top_level.txt 2023-12-13T21:51:35,610 writing manifest file '/tmp/pip-pip-egg-info-poxw81vs/scUNAGI.egg-info/SOURCES.txt' 2023-12-13T21:51:35,689 reading manifest file '/tmp/pip-pip-egg-info-poxw81vs/scUNAGI.egg-info/SOURCES.txt' 2023-12-13T21:51:35,690 reading manifest template 'MANIFEST.in' 2023-12-13T21:51:35,691 warning: no files found matching 'data/*.txt' 2023-12-13T21:51:35,694 writing manifest file '/tmp/pip-pip-egg-info-poxw81vs/scUNAGI.egg-info/SOURCES.txt' 2023-12-13T21:51:35,802 Preparing metadata (setup.py): finished with status 'done' 2023-12-13T21:51:35,807 Source in /tmp/pip-wheel-ksqnu704/scunagi_6c84e772132047f2a578ef134687124a has version 0.2, which satisfies requirement scunagi==0.2 from https://files.pythonhosted.org/packages/27/25/685283d6b4b5c35f39f23f234c4b69ceb58cfe44d5847fb370d65014efc7/scUNAGI-0.2.tar.gz 2023-12-13T21:51:35,808 Removed scunagi==0.2 from https://files.pythonhosted.org/packages/27/25/685283d6b4b5c35f39f23f234c4b69ceb58cfe44d5847fb370d65014efc7/scUNAGI-0.2.tar.gz from build tracker '/tmp/pip-build-tracker-mx048cjj' 2023-12-13T21:51:35,813 Created temporary directory: /tmp/pip-unpack-5v9feg81 2023-12-13T21:51:35,814 Created temporary directory: /tmp/pip-unpack-iv4hgfan 2023-12-13T21:51:35,876 Building wheels for collected packages: scunagi 2023-12-13T21:51:35,880 Created temporary directory: /tmp/pip-wheel-dv2dm848 2023-12-13T21:51:35,880 Building wheel for scunagi (setup.py): started 2023-12-13T21:51:35,881 Destination directory: /tmp/pip-wheel-dv2dm848 2023-12-13T21:51:35,882 Running command python setup.py bdist_wheel 2023-12-13T21:51:36,894 running bdist_wheel 2023-12-13T21:51:36,989 running build 2023-12-13T21:51:36,989 running build_py 2023-12-13T21:51:37,016 creating build 2023-12-13T21:51:37,017 creating build/lib 2023-12-13T21:51:37,018 creating build/lib/UNAGI 2023-12-13T21:51:37,019 copying UNAGI/afterall_utils.py -> build/lib/UNAGI 2023-12-13T21:51:37,021 copying UNAGI/getProgressionTopMarkers.py -> build/lib/UNAGI 2023-12-13T21:51:37,024 copying UNAGI/pyro_models.py -> build/lib/UNAGI 2023-12-13T21:51:37,026 copying UNAGI/test_with_small.py -> build/lib/UNAGI 2023-12-13T21:51:37,028 copying UNAGI/distDistance.py -> build/lib/UNAGI 2023-12-13T21:51:37,030 copying UNAGI/UNAGI.py -> build/lib/UNAGI 2023-12-13T21:51:37,033 copying UNAGI/speedup_perturbation.py -> build/lib/UNAGI 2023-12-13T21:51:37,035 copying UNAGI/analysis_perturbation.py -> build/lib/UNAGI 2023-12-13T21:51:37,038 copying UNAGI/trainer_utils.py -> build/lib/UNAGI 2023-12-13T21:51:37,040 copying UNAGI/test_with_small_analyse.py -> build/lib/UNAGI 2023-12-13T21:51:37,042 copying UNAGI/ganmyelbo.py -> build/lib/UNAGI 2023-12-13T21:51:37,044 copying UNAGI/processIDREM.py -> build/lib/UNAGI 2023-12-13T21:51:37,046 copying UNAGI/__init__.py -> build/lib/UNAGI 2023-12-13T21:51:37,048 copying UNAGI/buildGraph.py -> build/lib/UNAGI 2023-12-13T21:51:37,050 copying UNAGI/h5adReader.py -> build/lib/UNAGI 2023-12-13T21:51:37,052 copying UNAGI/gcn_utilis.py -> build/lib/UNAGI 2023-12-13T21:51:37,053 copying UNAGI/get_hcmarkers.py -> build/lib/UNAGI 2023-12-13T21:51:37,056 copying UNAGI/utils.py -> build/lib/UNAGI 2023-12-13T21:51:37,058 copying UNAGI/CPO_utils.py -> build/lib/UNAGI 2023-12-13T21:51:37,060 copying UNAGI/UNAGI_runner.py -> build/lib/UNAGI 2023-12-13T21:51:37,062 copying UNAGI/trainer.py -> build/lib/UNAGI 2023-12-13T21:51:37,064 copying UNAGI/shuffle_progressionMarker_background.py -> build/lib/UNAGI 2023-12-13T21:51:37,066 copying UNAGI/processTFs.py -> build/lib/UNAGI 2023-12-13T21:51:37,069 copying UNAGI/UNAGI_analyst.py -> build/lib/UNAGI 2023-12-13T21:51:37,071 creating build/lib/UNAGI/perturbations 2023-12-13T21:51:37,072 copying UNAGI/perturbations/pathways.py -> build/lib/UNAGI/perturbations 2023-12-13T21:51:37,074 copying UNAGI/perturbations/compounds.py -> build/lib/UNAGI/perturbations 2023-12-13T21:51:37,076 copying UNAGI/perturbations/__init__.py -> build/lib/UNAGI/perturbations 2023-12-13T21:51:37,078 creating build/lib/UNAGI/plotting 2023-12-13T21:51:37,078 copying UNAGI/plotting/plot_hierarchical_markers_heatmap.py -> build/lib/UNAGI/plotting 2023-12-13T21:51:37,080 copying UNAGI/plotting/plot_stage_dendrogram.py -> build/lib/UNAGI/plotting 2023-12-13T21:51:37,082 copying UNAGI/plotting/plot_cell_embeddings.py -> build/lib/UNAGI/plotting 2023-12-13T21:51:37,084 copying UNAGI/plotting/__init__.py -> build/lib/UNAGI/plotting 2023-12-13T21:51:37,085 copying UNAGI/plotting/plot_cell_type_composition.py -> build/lib/UNAGI/plotting 2023-12-13T21:51:37,086 running egg_info 2023-12-13T21:51:37,139 writing scUNAGI.egg-info/PKG-INFO 2023-12-13T21:51:37,144 writing dependency_links to scUNAGI.egg-info/dependency_links.txt 2023-12-13T21:51:37,146 writing requirements to scUNAGI.egg-info/requires.txt 2023-12-13T21:51:37,147 writing top-level names to scUNAGI.egg-info/top_level.txt 2023-12-13T21:51:37,177 reading manifest file 'scUNAGI.egg-info/SOURCES.txt' 2023-12-13T21:51:37,180 reading manifest template 'MANIFEST.in' 2023-12-13T21:51:37,180 warning: no files found matching 'data/*.txt' 2023-12-13T21:51:37,183 writing manifest file 'scUNAGI.egg-info/SOURCES.txt' 2023-12-13T21:51:37,186 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'UNAGI.data' is absent from the `packages` configuration. 2023-12-13T21:51:37,186 !! 2023-12-13T21:51:37,187 ******************************************************************************** 2023-12-13T21:51:37,188 ############################ 2023-12-13T21:51:37,188 # Package would be ignored # 2023-12-13T21:51:37,189 ############################ 2023-12-13T21:51:37,189 Python recognizes 'UNAGI.data' as an importable package[^1], 2023-12-13T21:51:37,190 but it is absent from setuptools' `packages` configuration. 2023-12-13T21:51:37,190 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-13T21:51:37,191 package, please make sure that 'UNAGI.data' is explicitly added 2023-12-13T21:51:37,192 to the `packages` configuration field. 2023-12-13T21:51:37,193 Alternatively, you can also rely on setuptools' discovery methods 2023-12-13T21:51:37,194 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-13T21:51:37,194 instead of `find_packages(...)`/`find:`). 2023-12-13T21:51:37,195 You can read more about "package discovery" on setuptools documentation page: 2023-12-13T21:51:37,197 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-13T21:51:37,198 If you don't want 'UNAGI.data' to be distributed and are 2023-12-13T21:51:37,198 already explicitly excluding 'UNAGI.data' via 2023-12-13T21:51:37,199 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-13T21:51:37,199 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-13T21:51:37,200 combination with a more fine grained `package-data` configuration. 2023-12-13T21:51:37,202 You can read more about "package data files" on setuptools documentation page: 2023-12-13T21:51:37,203 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-13T21:51:37,205 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-13T21:51:37,206 even if it does not contain any `.py` files. 2023-12-13T21:51:37,206 On the other hand, currently there is no concept of package data 2023-12-13T21:51:37,207 directory, all directories are treated like packages. 2023-12-13T21:51:37,208 ******************************************************************************** 2023-12-13T21:51:37,209 !! 2023-12-13T21:51:37,209 check.warn(importable) 2023-12-13T21:51:37,210 creating build/lib/UNAGI/data 2023-12-13T21:51:37,211 copying UNAGI/data/brdID2cmapName.npy -> build/lib/UNAGI/data 2023-12-13T21:51:37,228 copying UNAGI/data/gesa_pathways.npy -> build/lib/UNAGI/data 2023-12-13T21:51:37,265 copying UNAGI/data/human_encode.txt -> build/lib/UNAGI/data 2023-12-13T21:51:37,671 copying UNAGI/data/jasper_target_pair.npy -> build/lib/UNAGI/data 2023-12-13T21:51:37,717 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-12-13T21:51:37,717 !! 2023-12-13T21:51:37,719 ******************************************************************************** 2023-12-13T21:51:37,719 Please avoid running ``setup.py`` directly. 2023-12-13T21:51:37,720 Instead, use pypa/build, pypa/installer or other 2023-12-13T21:51:37,721 standards-based tools. 2023-12-13T21:51:37,722 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-12-13T21:51:37,722 ******************************************************************************** 2023-12-13T21:51:37,723 !! 2023-12-13T21:51:37,724 self.initialize_options() 2023-12-13T21:51:37,751 installing to build/bdist.linux-armv7l/wheel 2023-12-13T21:51:37,752 running install 2023-12-13T21:51:37,786 running install_lib 2023-12-13T21:51:37,815 creating build/bdist.linux-armv7l 2023-12-13T21:51:37,816 creating build/bdist.linux-armv7l/wheel 2023-12-13T21:51:37,818 creating build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,819 copying build/lib/UNAGI/afterall_utils.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,821 copying build/lib/UNAGI/getProgressionTopMarkers.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,824 copying build/lib/UNAGI/pyro_models.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,826 copying build/lib/UNAGI/test_with_small.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,828 copying build/lib/UNAGI/distDistance.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,830 copying build/lib/UNAGI/UNAGI.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,832 copying build/lib/UNAGI/speedup_perturbation.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,835 copying build/lib/UNAGI/analysis_perturbation.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,838 copying build/lib/UNAGI/trainer_utils.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,841 creating build/bdist.linux-armv7l/wheel/UNAGI/perturbations 2023-12-13T21:51:37,842 copying build/lib/UNAGI/perturbations/pathways.py -> build/bdist.linux-armv7l/wheel/UNAGI/perturbations 2023-12-13T21:51:37,844 copying build/lib/UNAGI/perturbations/compounds.py -> build/bdist.linux-armv7l/wheel/UNAGI/perturbations 2023-12-13T21:51:37,845 copying build/lib/UNAGI/perturbations/__init__.py -> build/bdist.linux-armv7l/wheel/UNAGI/perturbations 2023-12-13T21:51:37,847 copying build/lib/UNAGI/test_with_small_analyse.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,849 copying build/lib/UNAGI/ganmyelbo.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,851 copying build/lib/UNAGI/processIDREM.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,854 copying build/lib/UNAGI/__init__.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,856 copying build/lib/UNAGI/buildGraph.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,858 copying build/lib/UNAGI/h5adReader.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,861 copying build/lib/UNAGI/gcn_utilis.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,863 creating build/bdist.linux-armv7l/wheel/UNAGI/plotting 2023-12-13T21:51:37,864 copying build/lib/UNAGI/plotting/plot_hierarchical_markers_heatmap.py -> build/bdist.linux-armv7l/wheel/UNAGI/plotting 2023-12-13T21:51:37,866 copying build/lib/UNAGI/plotting/plot_stage_dendrogram.py -> build/bdist.linux-armv7l/wheel/UNAGI/plotting 2023-12-13T21:51:37,868 copying build/lib/UNAGI/plotting/plot_cell_embeddings.py -> build/bdist.linux-armv7l/wheel/UNAGI/plotting 2023-12-13T21:51:37,870 copying build/lib/UNAGI/plotting/__init__.py -> build/bdist.linux-armv7l/wheel/UNAGI/plotting 2023-12-13T21:51:37,871 copying build/lib/UNAGI/plotting/plot_cell_type_composition.py -> build/bdist.linux-armv7l/wheel/UNAGI/plotting 2023-12-13T21:51:37,873 copying build/lib/UNAGI/get_hcmarkers.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,875 copying build/lib/UNAGI/utils.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,878 copying build/lib/UNAGI/CPO_utils.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,880 copying build/lib/UNAGI/UNAGI_runner.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,882 copying build/lib/UNAGI/trainer.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,884 copying build/lib/UNAGI/shuffle_progressionMarker_background.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:37,887 creating build/bdist.linux-armv7l/wheel/UNAGI/data 2023-12-13T21:51:37,888 copying build/lib/UNAGI/data/jasper_target_pair.npy -> build/bdist.linux-armv7l/wheel/UNAGI/data 2023-12-13T21:51:37,907 copying build/lib/UNAGI/data/brdID2cmapName.npy -> build/bdist.linux-armv7l/wheel/UNAGI/data 2023-12-13T21:51:37,931 copying build/lib/UNAGI/data/human_encode.txt -> build/bdist.linux-armv7l/wheel/UNAGI/data 2023-12-13T21:51:38,326 copying build/lib/UNAGI/data/gesa_pathways.npy -> build/bdist.linux-armv7l/wheel/UNAGI/data 2023-12-13T21:51:38,364 copying build/lib/UNAGI/processTFs.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:38,367 copying build/lib/UNAGI/UNAGI_analyst.py -> build/bdist.linux-armv7l/wheel/UNAGI 2023-12-13T21:51:38,369 running install_egg_info 2023-12-13T21:51:38,399 Copying scUNAGI.egg-info to build/bdist.linux-armv7l/wheel/scUNAGI-0.2-py3.11.egg-info 2023-12-13T21:51:38,409 running install_scripts 2023-12-13T21:51:38,437 creating build/bdist.linux-armv7l/wheel/scUNAGI-0.2.dist-info/WHEEL 2023-12-13T21:51:38,439 creating '/tmp/pip-wheel-dv2dm848/scUNAGI-0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-13T21:51:38,442 adding 'UNAGI/CPO_utils.py' 2023-12-13T21:51:38,443 adding 'UNAGI/UNAGI.py' 2023-12-13T21:51:38,445 adding 'UNAGI/UNAGI_analyst.py' 2023-12-13T21:51:38,447 adding 'UNAGI/UNAGI_runner.py' 2023-12-13T21:51:38,448 adding 'UNAGI/__init__.py' 2023-12-13T21:51:38,450 adding 'UNAGI/afterall_utils.py' 2023-12-13T21:51:38,454 adding 'UNAGI/analysis_perturbation.py' 2023-12-13T21:51:38,456 adding 'UNAGI/buildGraph.py' 2023-12-13T21:51:38,458 adding 'UNAGI/distDistance.py' 2023-12-13T21:51:38,461 adding 'UNAGI/ganmyelbo.py' 2023-12-13T21:51:38,462 adding 'UNAGI/gcn_utilis.py' 2023-12-13T21:51:38,464 adding 'UNAGI/getProgressionTopMarkers.py' 2023-12-13T21:51:38,467 adding 'UNAGI/get_hcmarkers.py' 2023-12-13T21:51:38,468 adding 'UNAGI/h5adReader.py' 2023-12-13T21:51:38,471 adding 'UNAGI/processIDREM.py' 2023-12-13T21:51:38,474 adding 'UNAGI/processTFs.py' 2023-12-13T21:51:38,477 adding 'UNAGI/pyro_models.py' 2023-12-13T21:51:38,479 adding 'UNAGI/shuffle_progressionMarker_background.py' 2023-12-13T21:51:38,483 adding 'UNAGI/speedup_perturbation.py' 2023-12-13T21:51:38,485 adding 'UNAGI/test_with_small.py' 2023-12-13T21:51:38,486 adding 'UNAGI/test_with_small_analyse.py' 2023-12-13T21:51:38,488 adding 'UNAGI/trainer.py' 2023-12-13T21:51:38,489 adding 'UNAGI/trainer_utils.py' 2023-12-13T21:51:38,492 adding 'UNAGI/utils.py' 2023-12-13T21:51:38,638 adding 'UNAGI/data/brdID2cmapName.npy' 2023-12-13T21:51:39,001 adding 'UNAGI/data/gesa_pathways.npy' 2023-12-13T21:51:41,108 adding 'UNAGI/data/human_encode.txt' 2023-12-13T21:51:41,443 adding 'UNAGI/data/jasper_target_pair.npy' 2023-12-13T21:51:41,451 adding 'UNAGI/perturbations/__init__.py' 2023-12-13T21:51:41,452 adding 'UNAGI/perturbations/compounds.py' 2023-12-13T21:51:41,454 adding 'UNAGI/perturbations/pathways.py' 2023-12-13T21:51:41,455 adding 'UNAGI/plotting/__init__.py' 2023-12-13T21:51:41,456 adding 'UNAGI/plotting/plot_cell_embeddings.py' 2023-12-13T21:51:41,458 adding 'UNAGI/plotting/plot_cell_type_composition.py' 2023-12-13T21:51:41,459 adding 'UNAGI/plotting/plot_hierarchical_markers_heatmap.py' 2023-12-13T21:51:41,460 adding 'UNAGI/plotting/plot_stage_dendrogram.py' 2023-12-13T21:51:41,463 adding 'scUNAGI-0.2.dist-info/METADATA' 2023-12-13T21:51:41,464 adding 'scUNAGI-0.2.dist-info/WHEEL' 2023-12-13T21:51:41,464 adding 'scUNAGI-0.2.dist-info/top_level.txt' 2023-12-13T21:51:41,466 adding 'scUNAGI-0.2.dist-info/RECORD' 2023-12-13T21:51:41,525 removing build/bdist.linux-armv7l/wheel 2023-12-13T21:51:41,661 Building wheel for scunagi (setup.py): finished with status 'done' 2023-12-13T21:51:41,714 Created wheel for scunagi: filename=scUNAGI-0.2-py3-none-any.whl size=5189216 sha256=e8111234b02add4b4fb4a5b5318c0a308a10633470a5e82a7d3d423438ae509f 2023-12-13T21:51:41,716 Stored in directory: /tmp/pip-ephem-wheel-cache-0c407wtc/wheels/2b/52/4c/d881c364e5d5299107a2dff59c85e5f60749b2ca85f262f043 2023-12-13T21:51:41,729 Successfully built scunagi 2023-12-13T21:51:41,872 Removed build tracker: '/tmp/pip-build-tracker-mx048cjj'