2023-12-13T21:56:29,629 Created temporary directory: /tmp/pip-build-tracker-0udi3tan
2023-12-13T21:56:29,630 Initialized build tracking at /tmp/pip-build-tracker-0udi3tan
2023-12-13T21:56:29,631 Created build tracker: /tmp/pip-build-tracker-0udi3tan
2023-12-13T21:56:29,631 Entered build tracker: /tmp/pip-build-tracker-0udi3tan
2023-12-13T21:56:29,632 Created temporary directory: /tmp/pip-wheel-or12v_h7
2023-12-13T21:56:29,635 Created temporary directory: /tmp/pip-ephem-wheel-cache-lsdqoakb
2023-12-13T21:56:29,657 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-13T21:56:29,660 2 location(s) to search for versions of kegg2bipartitegraph:
2023-12-13T21:56:29,660 * https://pypi.org/simple/kegg2bipartitegraph/
2023-12-13T21:56:29,660 * https://www.piwheels.org/simple/kegg2bipartitegraph/
2023-12-13T21:56:29,661 Fetching project page and analyzing links: https://pypi.org/simple/kegg2bipartitegraph/
2023-12-13T21:56:29,662 Getting page https://pypi.org/simple/kegg2bipartitegraph/
2023-12-13T21:56:29,663 Found index url https://pypi.org/simple/
2023-12-13T21:56:29,915 Fetched page https://pypi.org/simple/kegg2bipartitegraph/ as application/vnd.pypi.simple.v1+json
2023-12-13T21:56:29,917   Skipping link: No binaries permitted for kegg2bipartitegraph: https://files.pythonhosted.org/packages/fa/f0/7c8a7cd8544284dc2b5f429bdb7ad1220023dc005df0ca98b6b90f681fed/kegg2bipartitegraph-0.0.1-py3-none-any.whl (from https://pypi.org/simple/kegg2bipartitegraph/)
2023-12-13T21:56:29,918   Found link https://files.pythonhosted.org/packages/e0/76/6dbe69ef48e5d079046fd2ef16183d5c1184ff5632824a5661f3568a2297/kegg2bipartitegraph-0.0.1.tar.gz (from https://pypi.org/simple/kegg2bipartitegraph/), version: 0.0.1
2023-12-13T21:56:29,918   Skipping link: No binaries permitted for kegg2bipartitegraph: https://files.pythonhosted.org/packages/99/98/c5d310cda928afb8c4c99faa27b3183a90dc5ae5481100c03ca9927132e3/kegg2bipartitegraph-0.0.2-py3-none-any.whl (from https://pypi.org/simple/kegg2bipartitegraph/)
2023-12-13T21:56:29,919   Found link https://files.pythonhosted.org/packages/1d/fe/0d208ef21ffff0d1e05ed2ea1e6a1c383f8203c98caa923d76bc98c415b5/kegg2bipartitegraph-0.0.2.tar.gz (from https://pypi.org/simple/kegg2bipartitegraph/), version: 0.0.2
2023-12-13T21:56:29,920   Skipping link: No binaries permitted for kegg2bipartitegraph: https://files.pythonhosted.org/packages/f5/b2/0f385cbeef8b2dd9194ba33c07b59b371305820b0b005d954a38810d4f7c/kegg2bipartitegraph-0.0.3-py3-none-any.whl (from https://pypi.org/simple/kegg2bipartitegraph/)
2023-12-13T21:56:29,920   Found link https://files.pythonhosted.org/packages/cb/c6/a8c3e623f4959e307bc06413a28f6627ae7a19ac13973ec79d03ab2093a2/kegg2bipartitegraph-0.0.3.tar.gz (from https://pypi.org/simple/kegg2bipartitegraph/), version: 0.0.3
2023-12-13T21:56:29,921 Fetching project page and analyzing links: https://www.piwheels.org/simple/kegg2bipartitegraph/
2023-12-13T21:56:29,922 Getting page https://www.piwheels.org/simple/kegg2bipartitegraph/
2023-12-13T21:56:29,923 Found index url https://www.piwheels.org/simple/
2023-12-13T21:56:30,077 Fetched page https://www.piwheels.org/simple/kegg2bipartitegraph/ as text/html
2023-12-13T21:56:30,079   Skipping link: No binaries permitted for kegg2bipartitegraph: https://www.piwheels.org/simple/kegg2bipartitegraph/kegg2bipartitegraph-0.0.2-py3-none-any.whl#sha256=9a12e9eab7a2d386b314d2bc529d3d55293242a70d14e3e1f36fb703d1bb247a (from https://www.piwheels.org/simple/kegg2bipartitegraph/)
2023-12-13T21:56:30,079   Skipping link: No binaries permitted for kegg2bipartitegraph: https://www.piwheels.org/simple/kegg2bipartitegraph/kegg2bipartitegraph-0.0.1-py3-none-any.whl#sha256=928d8c7b74855e7631502f233b4e879b375ef89ac1f0cd32703636ee675360fd (from https://www.piwheels.org/simple/kegg2bipartitegraph/)
2023-12-13T21:56:30,080 Skipping link: not a file: https://www.piwheels.org/simple/kegg2bipartitegraph/
2023-12-13T21:56:30,081 Skipping link: not a file: https://pypi.org/simple/kegg2bipartitegraph/
2023-12-13T21:56:30,101 Given no hashes to check 1 links for project 'kegg2bipartitegraph': discarding no candidates
2023-12-13T21:56:30,120 Collecting kegg2bipartitegraph==0.0.3
2023-12-13T21:56:30,122   Created temporary directory: /tmp/pip-unpack-yguxufff
2023-12-13T21:56:30,334   Downloading kegg2bipartitegraph-0.0.3.tar.gz (1.8 MB)
2023-12-13T21:56:31,111   Added kegg2bipartitegraph==0.0.3 from https://files.pythonhosted.org/packages/cb/c6/a8c3e623f4959e307bc06413a28f6627ae7a19ac13973ec79d03ab2093a2/kegg2bipartitegraph-0.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-0udi3tan'
2023-12-13T21:56:31,112   Running setup.py (path:/tmp/pip-wheel-or12v_h7/kegg2bipartitegraph_7446a6758d02495ebaa37111d3f07807/setup.py) egg_info for package kegg2bipartitegraph
2023-12-13T21:56:31,113   Created temporary directory: /tmp/pip-pip-egg-info-nkmdysxt
2023-12-13T21:56:31,114   Preparing metadata (setup.py): started
2023-12-13T21:56:31,115   Running command python setup.py egg_info
2023-12-13T21:56:31,564   No `name` configuration, performing automatic discovery
2023-12-13T21:56:31,934   running egg_info
2023-12-13T21:56:31,936   creating /tmp/pip-pip-egg-info-nkmdysxt/kegg2bipartitegraph.egg-info
2023-12-13T21:56:31,962   writing /tmp/pip-pip-egg-info-nkmdysxt/kegg2bipartitegraph.egg-info/PKG-INFO
2023-12-13T21:56:31,965   writing dependency_links to /tmp/pip-pip-egg-info-nkmdysxt/kegg2bipartitegraph.egg-info/dependency_links.txt
2023-12-13T21:56:31,967   writing entry points to /tmp/pip-pip-egg-info-nkmdysxt/kegg2bipartitegraph.egg-info/entry_points.txt
2023-12-13T21:56:31,968   writing requirements to /tmp/pip-pip-egg-info-nkmdysxt/kegg2bipartitegraph.egg-info/requires.txt
2023-12-13T21:56:31,969   writing top-level names to /tmp/pip-pip-egg-info-nkmdysxt/kegg2bipartitegraph.egg-info/top_level.txt
2023-12-13T21:56:31,971   writing manifest file '/tmp/pip-pip-egg-info-nkmdysxt/kegg2bipartitegraph.egg-info/SOURCES.txt'
2023-12-13T21:56:32,057   reading manifest file '/tmp/pip-pip-egg-info-nkmdysxt/kegg2bipartitegraph.egg-info/SOURCES.txt'
2023-12-13T21:56:32,059   adding license file 'LICENSE'
2023-12-13T21:56:32,062   writing manifest file '/tmp/pip-pip-egg-info-nkmdysxt/kegg2bipartitegraph.egg-info/SOURCES.txt'
2023-12-13T21:56:32,160   Preparing metadata (setup.py): finished with status 'done'
2023-12-13T21:56:32,164   Source in /tmp/pip-wheel-or12v_h7/kegg2bipartitegraph_7446a6758d02495ebaa37111d3f07807 has version 0.0.3, which satisfies requirement kegg2bipartitegraph==0.0.3 from https://files.pythonhosted.org/packages/cb/c6/a8c3e623f4959e307bc06413a28f6627ae7a19ac13973ec79d03ab2093a2/kegg2bipartitegraph-0.0.3.tar.gz
2023-12-13T21:56:32,165   Removed kegg2bipartitegraph==0.0.3 from https://files.pythonhosted.org/packages/cb/c6/a8c3e623f4959e307bc06413a28f6627ae7a19ac13973ec79d03ab2093a2/kegg2bipartitegraph-0.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-0udi3tan'
2023-12-13T21:56:32,169 Created temporary directory: /tmp/pip-unpack-jst8606y
2023-12-13T21:56:32,170 Created temporary directory: /tmp/pip-unpack-bptape69
2023-12-13T21:56:32,176 Building wheels for collected packages: kegg2bipartitegraph
2023-12-13T21:56:32,180   Created temporary directory: /tmp/pip-wheel-jzpx4ys6
2023-12-13T21:56:32,181   Building wheel for kegg2bipartitegraph (setup.py): started
2023-12-13T21:56:32,182   Destination directory: /tmp/pip-wheel-jzpx4ys6
2023-12-13T21:56:32,183   Running command python setup.py bdist_wheel
2023-12-13T21:56:32,625   No `name` configuration, performing automatic discovery
2023-12-13T21:56:32,983   running bdist_wheel
2023-12-13T21:56:33,112   running build
2023-12-13T21:56:33,113   running build_py
2023-12-13T21:56:33,141   creating build
2023-12-13T21:56:33,141   creating build/lib
2023-12-13T21:56:33,142   creating build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,143   copying kegg2bipartitegraph/__init__.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,145   copying kegg2bipartitegraph/organism.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,148   copying kegg2bipartitegraph/sbml.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,150   copying kegg2bipartitegraph/mapping.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,152   copying kegg2bipartitegraph/picrust.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,154   copying kegg2bipartitegraph/esmecata.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,156   copying kegg2bipartitegraph/utils.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,158   copying kegg2bipartitegraph/eggnog.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,161   copying kegg2bipartitegraph/scope.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,162   copying kegg2bipartitegraph/graph.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,164   copying kegg2bipartitegraph/__main__.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,166   copying kegg2bipartitegraph/reference.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,169   copying kegg2bipartitegraph/kofamkoala.py -> build/lib/kegg2bipartitegraph
2023-12-13T21:56:33,175   creating build/lib/kegg2bipartitegraph/data
2023-12-13T21:56:33,176   creating build/lib/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,177   copying kegg2bipartitegraph/data/kegg_model/kegg_removed_changed_reaction.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,180   copying kegg2bipartitegraph/data/kegg_model/kegg_pathways.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,199   copying kegg2bipartitegraph/data/kegg_model/kegg_modules.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,203   copying kegg2bipartitegraph/data/kegg_model/kegg_compound_name.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,223   copying kegg2bipartitegraph/data/kegg_model/kegg_mapping.tsv -> build/lib/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,230   copying kegg2bipartitegraph/data/kegg_model/kegg_metadata.json -> build/lib/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,232   copying kegg2bipartitegraph/data/kegg_model/kegg_model.sbml -> build/lib/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,423   copying kegg2bipartitegraph/data/kegg_model/kegg_model.graphml -> build/lib/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,480   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-12-13T21:56:33,481   !!

2023-12-13T21:56:33,482           ********************************************************************************
2023-12-13T21:56:33,482           Please avoid running ``setup.py`` directly.
2023-12-13T21:56:33,483           Instead, use pypa/build, pypa/installer or other
2023-12-13T21:56:33,483           standards-based tools.

2023-12-13T21:56:33,485           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-12-13T21:56:33,485           ********************************************************************************

2023-12-13T21:56:33,486   !!
2023-12-13T21:56:33,487     self.initialize_options()
2023-12-13T21:56:33,511   installing to build/bdist.linux-armv7l/wheel
2023-12-13T21:56:33,512   running install
2023-12-13T21:56:33,535   running install_lib
2023-12-13T21:56:33,561   creating build/bdist.linux-armv7l
2023-12-13T21:56:33,561   creating build/bdist.linux-armv7l/wheel
2023-12-13T21:56:33,563   creating build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,564   creating build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data
2023-12-13T21:56:33,566   creating build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,567   copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_removed_changed_reaction.tsv -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,571   copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_pathways.tsv -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,586   copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_modules.tsv -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,590   copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_compound_name.tsv -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,607   copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_model.graphml -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,644   copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_mapping.tsv -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,651   copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_model.sbml -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,837   copying build/lib/kegg2bipartitegraph/data/kegg_model/kegg_metadata.json -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph/data/kegg_model
2023-12-13T21:56:33,838   copying build/lib/kegg2bipartitegraph/__init__.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,840   copying build/lib/kegg2bipartitegraph/organism.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,842   copying build/lib/kegg2bipartitegraph/sbml.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,844   copying build/lib/kegg2bipartitegraph/mapping.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,846   copying build/lib/kegg2bipartitegraph/picrust.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,848   copying build/lib/kegg2bipartitegraph/esmecata.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,851   copying build/lib/kegg2bipartitegraph/utils.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,853   copying build/lib/kegg2bipartitegraph/eggnog.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,855   copying build/lib/kegg2bipartitegraph/scope.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,857   copying build/lib/kegg2bipartitegraph/graph.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,859   copying build/lib/kegg2bipartitegraph/__main__.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,861   copying build/lib/kegg2bipartitegraph/reference.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,864   copying build/lib/kegg2bipartitegraph/kofamkoala.py -> build/bdist.linux-armv7l/wheel/kegg2bipartitegraph
2023-12-13T21:56:33,866   running install_egg_info
2023-12-13T21:56:33,896   running egg_info
2023-12-13T21:56:33,921   writing kegg2bipartitegraph.egg-info/PKG-INFO
2023-12-13T21:56:33,924   writing dependency_links to kegg2bipartitegraph.egg-info/dependency_links.txt
2023-12-13T21:56:33,926   writing entry points to kegg2bipartitegraph.egg-info/entry_points.txt
2023-12-13T21:56:33,927   writing requirements to kegg2bipartitegraph.egg-info/requires.txt
2023-12-13T21:56:33,928   writing top-level names to kegg2bipartitegraph.egg-info/top_level.txt
2023-12-13T21:56:33,959   reading manifest file 'kegg2bipartitegraph.egg-info/SOURCES.txt'
2023-12-13T21:56:33,962   adding license file 'LICENSE'
2023-12-13T21:56:33,964   writing manifest file 'kegg2bipartitegraph.egg-info/SOURCES.txt'
2023-12-13T21:56:33,966   Copying kegg2bipartitegraph.egg-info to build/bdist.linux-armv7l/wheel/kegg2bipartitegraph-0.0.3-py3.11.egg-info
2023-12-13T21:56:33,976   running install_scripts
2023-12-13T21:56:33,992   creating build/bdist.linux-armv7l/wheel/kegg2bipartitegraph-0.0.3.dist-info/WHEEL
2023-12-13T21:56:33,994   creating '/tmp/pip-wheel-jzpx4ys6/kegg2bipartitegraph-0.0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-12-13T21:56:33,997   adding 'kegg2bipartitegraph/__init__.py'
2023-12-13T21:56:33,998   adding 'kegg2bipartitegraph/__main__.py'
2023-12-13T21:56:34,001   adding 'kegg2bipartitegraph/eggnog.py'
2023-12-13T21:56:34,003   adding 'kegg2bipartitegraph/esmecata.py'
2023-12-13T21:56:34,005   adding 'kegg2bipartitegraph/graph.py'
2023-12-13T21:56:34,007   adding 'kegg2bipartitegraph/kofamkoala.py'
2023-12-13T21:56:34,008   adding 'kegg2bipartitegraph/mapping.py'
2023-12-13T21:56:34,010   adding 'kegg2bipartitegraph/organism.py'
2023-12-13T21:56:34,012   adding 'kegg2bipartitegraph/picrust.py'
2023-12-13T21:56:34,016   adding 'kegg2bipartitegraph/reference.py'
2023-12-13T21:56:34,018   adding 'kegg2bipartitegraph/sbml.py'
2023-12-13T21:56:34,020   adding 'kegg2bipartitegraph/scope.py'
2023-12-13T21:56:34,021   adding 'kegg2bipartitegraph/utils.py'
2023-12-13T21:56:34,168   adding 'kegg2bipartitegraph/data/kegg_model/kegg_compound_name.tsv'
2023-12-13T21:56:34,259   adding 'kegg2bipartitegraph/data/kegg_model/kegg_mapping.tsv'
2023-12-13T21:56:34,262   adding 'kegg2bipartitegraph/data/kegg_model/kegg_metadata.json'
2023-12-13T21:56:34,408   adding 'kegg2bipartitegraph/data/kegg_model/kegg_model.graphml'
2023-12-13T21:56:34,936   adding 'kegg2bipartitegraph/data/kegg_model/kegg_model.sbml'
2023-12-13T21:56:35,037   adding 'kegg2bipartitegraph/data/kegg_model/kegg_modules.tsv'
2023-12-13T21:56:35,220   adding 'kegg2bipartitegraph/data/kegg_model/kegg_pathways.tsv'
2023-12-13T21:56:35,234   adding 'kegg2bipartitegraph/data/kegg_model/kegg_removed_changed_reaction.tsv'
2023-12-13T21:56:35,241   adding 'kegg2bipartitegraph-0.0.3.dist-info/LICENSE'
2023-12-13T21:56:35,242   adding 'kegg2bipartitegraph-0.0.3.dist-info/METADATA'
2023-12-13T21:56:35,243   adding 'kegg2bipartitegraph-0.0.3.dist-info/WHEEL'
2023-12-13T21:56:35,244   adding 'kegg2bipartitegraph-0.0.3.dist-info/entry_points.txt'
2023-12-13T21:56:35,245   adding 'kegg2bipartitegraph-0.0.3.dist-info/top_level.txt'
2023-12-13T21:56:35,246   adding 'kegg2bipartitegraph-0.0.3.dist-info/RECORD'
2023-12-13T21:56:35,268   removing build/bdist.linux-armv7l/wheel
2023-12-13T21:56:35,383   Building wheel for kegg2bipartitegraph (setup.py): finished with status 'done'
2023-12-13T21:56:35,404   Created wheel for kegg2bipartitegraph: filename=kegg2bipartitegraph-0.0.3-py3-none-any.whl size=1861263 sha256=613dc29e4a6a2b0fda2a2890031785c41f8a321c555c7acd50c2273dcddfa2b6
2023-12-13T21:56:35,405   Stored in directory: /tmp/pip-ephem-wheel-cache-lsdqoakb/wheels/27/fe/e9/fb334d8976567e025985d2077deb8797e773adf2081638b3d6
2023-12-13T21:56:35,418 Successfully built kegg2bipartitegraph
2023-12-13T21:56:35,476 Removed build tracker: '/tmp/pip-build-tracker-0udi3tan'