2023-12-13T22:05:30,202 Created temporary directory: /tmp/pip-build-tracker-6pzyqgta
2023-12-13T22:05:30,203 Initialized build tracking at /tmp/pip-build-tracker-6pzyqgta
2023-12-13T22:05:30,204 Created build tracker: /tmp/pip-build-tracker-6pzyqgta
2023-12-13T22:05:30,204 Entered build tracker: /tmp/pip-build-tracker-6pzyqgta
2023-12-13T22:05:30,205 Created temporary directory: /tmp/pip-wheel-zmz_e0k7
2023-12-13T22:05:30,208 Created temporary directory: /tmp/pip-ephem-wheel-cache-11owcw9i
2023-12-13T22:05:30,231 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-13T22:05:30,234 2 location(s) to search for versions of abutils:
2023-12-13T22:05:30,234 * https://pypi.org/simple/abutils/
2023-12-13T22:05:30,234 * https://www.piwheels.org/simple/abutils/
2023-12-13T22:05:30,235 Fetching project page and analyzing links: https://pypi.org/simple/abutils/
2023-12-13T22:05:30,236 Getting page https://pypi.org/simple/abutils/
2023-12-13T22:05:30,237 Found index url https://pypi.org/simple/
2023-12-13T22:05:30,495 Fetched page https://pypi.org/simple/abutils/ as application/vnd.pypi.simple.v1+json
2023-12-13T22:05:30,504   Found link https://files.pythonhosted.org/packages/50/68/e90af4390a5bf4ae7f4d4c320618c21938407e2cbccb1d8eb9e2128129f7/abutils-0.0.1.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.1
2023-12-13T22:05:30,505   Found link https://files.pythonhosted.org/packages/2a/34/20450169e044c8a5b3f0789cb6792ac3f0d94ee7314aecda4332460d3996/abutils-0.0.2.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.2
2023-12-13T22:05:30,505   Found link https://files.pythonhosted.org/packages/e7/0b/92eacaadffa6dbe5536af17cd2288991862e5ca8a5193bc3f5f0c511939b/abutils-0.0.3.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.3
2023-12-13T22:05:30,506   Found link https://files.pythonhosted.org/packages/66/9c/c88a230d9a7df70ed076345a5697bffbac79affa98de6bc7335cbe399508/abutils-0.0.4.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.4
2023-12-13T22:05:30,507   Found link https://files.pythonhosted.org/packages/36/3e/e6b030787fca71eedbaaa8be3b8b0169a655c7403622bc0c418918121b72/abutils-0.0.5.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.5
2023-12-13T22:05:30,507   Found link https://files.pythonhosted.org/packages/c2/4b/a1c076b09bf2ab1f5545d0f9fe05c7861166c49ea9846f2d72f6306e792c/abutils-0.0.6.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.6
2023-12-13T22:05:30,508   Found link https://files.pythonhosted.org/packages/ba/48/ccd3a0f5de7c0b2857f163b24120b027f9b2d88b5b8898646a6126d2ce6b/abutils-0.0.7.tar.gz (from https://pypi.org/simple/abutils/), version: 0.0.7
2023-12-13T22:05:30,509   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/8e/ba/0b774748bc954d98e3246982d1017d09459ecbc21a76628161aa49d4e3fc/abutils-0.1.0-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,510   Found link https://files.pythonhosted.org/packages/8d/4f/f8bde54f3acd7bf945ac9d612145ca8fc2a0eecf26aa439921941211a91a/abutils-0.1.0.tar.gz (from https://pypi.org/simple/abutils/), version: 0.1.0
2023-12-13T22:05:30,510   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/99/db/544d2861d9f00f1454ae247e50d074062929bdeb0c2d0e968f51e132320e/abutils-0.1.1-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,511   Found link https://files.pythonhosted.org/packages/2e/53/f9f6ef913b46b47233508bafc5c4869a46f3c66a0ec9e446bef0537c88f6/abutils-0.1.1.tar.gz (from https://pypi.org/simple/abutils/), version: 0.1.1
2023-12-13T22:05:30,512   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/72/6e/6af90e6c896511e60fa77eeb6742933760f8cc5ba8a8ffbea1bf00440dcf/abutils-0.2-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,512   Found link https://files.pythonhosted.org/packages/58/06/198c2161367eed257bbbc6295af2f6bd9148bccd26f67535bd07d1974dfb/abutils-0.2.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2
2023-12-13T22:05:30,513   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/e9/6b/41bd824641aee954bdc00d6fcc3d7f411af32a68acdbb7330c59d7fab67f/abutils-0.2.1-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,514   Found link https://files.pythonhosted.org/packages/c3/51/083596ecb529073ccc5142ffe85766aef208bd4d6925da8f771f6f95e256/abutils-0.2.1.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.1
2023-12-13T22:05:30,514   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/94/cf/ae1ab5392b0f34c874cc8388d4df2985a2fc02d63dedcad0c2f4ca4b92bd/abutils-0.2.2-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,515   Found link https://files.pythonhosted.org/packages/dc/f5/c8838ebb6fbaa6b3d01d01d2d56e2ad5352fbeebf5086542c5bcef34c06a/abutils-0.2.2.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.2
2023-12-13T22:05:30,516   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/6a/94/90937a56b32783d6d57a2d6ff5e47d10d1d384f3d084e304f7870297853d/abutils-0.2.3-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,516   Found link https://files.pythonhosted.org/packages/1e/a6/95c66c7ea2857825eb0af0fcd4e53687b65e4842b010caea5276bd97cd22/abutils-0.2.3.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.3
2023-12-13T22:05:30,517   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/1b/b2/13e6e64fe25b4ef34bcd9fbd9785b8446dbca4cf4a7fbbafddbfba957aad/abutils-0.2.4-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,517   Found link https://files.pythonhosted.org/packages/cc/04/a14461968dc575254af0e23cb7b259bfd57baa683653d88fcb21af6d526d/abutils-0.2.4.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.4
2023-12-13T22:05:30,518   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/f8/0d/f3f7b8eb834c24ffe8bf065ce6ab6bf5a60953ea369b1714a5130c0f17fe/abutils-0.2.5-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,518   Found link https://files.pythonhosted.org/packages/3a/91/b7e6649e58b286eb6bfcc14fbe33cc120e3ff30fbacf681b4dca97a448bd/abutils-0.2.5.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.5
2023-12-13T22:05:30,519   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/12/e1/e1ceba3721fa4fff7f176206a290b81ec655694bd89734038c4d699fbb7e/abutils-0.2.6-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,520   Found link https://files.pythonhosted.org/packages/45/72/e74e2706a57c4198e8bbd4808aede6033ab4d34fd3ee424340d0b9499677/abutils-0.2.6.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.6
2023-12-13T22:05:30,520   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/c0/a4/19862643abc6afa356a2820636a33717d5be8c10526d201168493a638fae/abutils-0.2.7-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,521   Found link https://files.pythonhosted.org/packages/00/01/891b1ca937c5e750cde18296579e86c2b58a95fed1bf39a5333d626a1d94/abutils-0.2.7.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.7
2023-12-13T22:05:30,522   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/4b/65/46f8207ebbebc30eec8dde3eba9f5d2d2a16cf8450d4a083a27468c59d65/abutils-0.2.8-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,522   Found link https://files.pythonhosted.org/packages/80/d4/73e1812e044e0443711b85e1037177b9cd39af0f21ece96e0745e9ddc266/abutils-0.2.8.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.8
2023-12-13T22:05:30,523   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/b9/39/de6c569ad2cdc7e6a441e15f25f48fedac246ffc194729518308051e12ec/abutils-0.2.9-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,524   Found link https://files.pythonhosted.org/packages/a2/a2/0c519de24d956d49801fe97153a28d623bd2fd411991d787b899b25c13a7/abutils-0.2.9.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.9
2023-12-13T22:05:30,524   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/4d/fd/ba6899283eaf68474bc2e600c2a5708137473eae7bf7ba3c076cd6303767/abutils-0.2.10-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,525   Found link https://files.pythonhosted.org/packages/16/2f/6264367df474ff3a9a5c5ef42771661bac1085d7133867270edb7c118684/abutils-0.2.10.tar.gz (from https://pypi.org/simple/abutils/), version: 0.2.10
2023-12-13T22:05:30,526   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/92/86/5f63b53160c54dacfd8f2653c0a6039fb4366a117c060e5f289766ac7fa8/abutils-0.3.0-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,526   Found link https://files.pythonhosted.org/packages/13/fc/afc4bbc66213912ee11b40a8ea571270b317c4367b5f28c523f6c3d4858f/abutils-0.3.0.tar.gz (from https://pypi.org/simple/abutils/), version: 0.3.0
2023-12-13T22:05:30,527   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/69/1c/cfed98cabbae17e2c3c3c49395ddc92554335ffef1eec47a78682a5e6870/abutils-0.3.1-py3-none-any.whl (from https://pypi.org/simple/abutils/)
2023-12-13T22:05:30,527   Found link https://files.pythonhosted.org/packages/0b/fb/21d3594c4fe0ce1e7b035808b68c73e6a14eef95fb27fb27e45cb50ecf18/abutils-0.3.1.tar.gz (from https://pypi.org/simple/abutils/), version: 0.3.1
2023-12-13T22:05:30,528   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/99/86/2e6b0ac4db36ffec78925d7fc6da7dfb15017038325f8daa7feac0729f03/abutils-0.4.1-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8)
2023-12-13T22:05:30,529   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/f6/d6/90c610e33db7ea064aaf85e875712994d51c6594fa034ea6dba0f994a332/abutils-0.4.2-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8)
2023-12-13T22:05:30,529   Found link https://files.pythonhosted.org/packages/05/4f/d2a62ba3753455ecb46772cb2c6c99148904a1fb1066e5ffb3a45d62ce53/abutils-0.4.2.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.2
2023-12-13T22:05:30,530   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/e1/fe/c5bb8d54b0c116ec2580b04b3a21f19c017b2437602701cda5a59012cad0/abutils-0.4.3-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8)
2023-12-13T22:05:30,531   Found link https://files.pythonhosted.org/packages/27/8c/e1177b8f90d4c56b25d779562900871e838398f003f10493c41383959492/abutils-0.4.3.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.3
2023-12-13T22:05:30,532   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/91/30/af7cea776cae6162286b03857e130350556991bf5e25435931b4e6e7fa59/abutils-0.4.4-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8)
2023-12-13T22:05:30,533   Found link https://files.pythonhosted.org/packages/38/35/b3ec5ecbd44bfb5d81d6d76f4eae2a5c6f8d19b31e4a2e98526ccfe98a83/abutils-0.4.4.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.4
2023-12-13T22:05:30,533   Skipping link: No binaries permitted for abutils: https://files.pythonhosted.org/packages/97/c7/38f78f7d9f6ec2b43ee909c0d72e3da5b1f357eb2137f9b72309e761843b/abutils-0.4.5-py3-none-any.whl (from https://pypi.org/simple/abutils/) (requires-python:>=3.8)
2023-12-13T22:05:30,534   Found link https://files.pythonhosted.org/packages/14/ba/621da2e617c467936d12b7568b959ad5b15b2859ac421b5d7fdfdb9de6b8/abutils-0.4.5.tar.gz (from https://pypi.org/simple/abutils/) (requires-python:>=3.8), version: 0.4.5
2023-12-13T22:05:30,535 Fetching project page and analyzing links: https://www.piwheels.org/simple/abutils/
2023-12-13T22:05:30,536 Getting page https://www.piwheels.org/simple/abutils/
2023-12-13T22:05:30,537 Found index url https://www.piwheels.org/simple/
2023-12-13T22:05:30,700 Fetched page https://www.piwheels.org/simple/abutils/ as text/html
2023-12-13T22:05:30,708   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.4.4-py3-none-any.whl#sha256=c6431239a8778cec21099f85b769106599aeb18efcb2b95b7da0a6803add1fc3 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8)
2023-12-13T22:05:30,708   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.4.3-py3-none-any.whl#sha256=5057eda1cd8d00800ffc6c3f7d9134301b04e1a27f67f2d2126809d2463da701 (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8)
2023-12-13T22:05:30,709   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.4.2-py3-none-any.whl#sha256=e3a66b81fd28bee5d6aad0c69329e384cb67263a57a72a62a56b7aa63f4d295e (from https://www.piwheels.org/simple/abutils/) (requires-python:>=3.8)
2023-12-13T22:05:30,709   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.3.1-py3-none-any.whl#sha256=1fbfc14143d5e4d142be747c1c55e24411e9943441689f13193e8cc5a7e9ce11 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,710   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.3.0-py3-none-any.whl#sha256=4260a96c149498cd519f4d6dbcbb5075a0b7cd820b16bec4cd6eafe452f6e7a6 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,710   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.10-py3-none-any.whl#sha256=e3c2000d5fbda1d63690e6f816caf1426457be23f1c6a8fa1ad98e7c60affdc2 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,711   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.9-py3-none-any.whl#sha256=84839a0dab320a6696a87f066a0305c0d4291cabe5e823926b72a5ad8dd04251 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,711   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.8-py3-none-any.whl#sha256=efacee89c956fcb8908db8f223563d8c9d9667fc837ca56a849aba84bcb5bcb8 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,712   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.7-py3-none-any.whl#sha256=d72c4998d17baff3346c3732d416710e4959d6d69954264b5c18ea7136967243 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,713   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.6-py3-none-any.whl#sha256=38b1c0070e0f5764ee6ffad6eadde071a320f0eb3372912678767047c9136880 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,713   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.5-py3-none-any.whl#sha256=132b4af2881b535924c6b615f7e0dca8d858a65db5ce7f600425f0afa220e942 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,714   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.4-py3-none-any.whl#sha256=b7cc50211227f95b0544149ddb49e17cf733ece77b8531c94bcdebabef433b03 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,714   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.3-py3-none-any.whl#sha256=6b5c561a177253264806f3f200ae9aaec814f0c8c0d4205621e783ed7a7e666d (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,715   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.2-py3-none-any.whl#sha256=c5fdeed840fe64d0f8ef6b8b41d34c9d30aaf82fe1313e5d2001037d4f2cdf4c (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,715   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2.1-py3-none-any.whl#sha256=53ea13e6f02b9605de8c9613420aaed78962fb944ecdfc100603204c264c7d40 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,716   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.2-py3-none-any.whl#sha256=ff38b64e1d607db600d5dd88d0a867273e041adde7d995e24c632ca7ee4c07bd (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,717   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.1.1-py3-none-any.whl#sha256=e848425dd30ebba12d526963aed48ce2705734d49626dcc0c01e60813ce6cf98 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,718   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.1.0-py3-none-any.whl#sha256=4546e6994f84194f448c4af73e9ac961b6cee59d5825bce6b688a7eb31f173f8 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,718   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.7-py3-none-any.whl#sha256=54b0191660cee12eae66a1c9a280779122ee367b18dc31f5386ed7d9695ba86d (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,718   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.6-py3-none-any.whl#sha256=fa097decefc770e42b78c47c6b74e544cb886b2913fdd2a9764d1649c1083edc (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,719   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.5-py3-none-any.whl#sha256=82da39e304387e62441d40c8da3e8b8e4f88b62838f0cfa01c9ac53272fd9322 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,719   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.4-py3-none-any.whl#sha256=a857179e2e3aacd72f0100ab26ddd429e314d0484d9dea700b6e3df6e7b08bfc (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,720   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.3-py3-none-any.whl#sha256=3f9161ddaf87fcf6397f20c643a10e6c64dcc028dd9d608e3ba95e9eb4b42301 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,720   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.2-py3-none-any.whl#sha256=fb1485c1bdfebb4961c6b63db9ae9c45af6af544bf5a1d88830bff9601c333f7 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,721   Skipping link: No binaries permitted for abutils: https://www.piwheels.org/simple/abutils/abutils-0.0.1-py3-none-any.whl#sha256=80befe258b5d18e6293ffa5f53b4c6fca19cd9c57418df3ad521a374f3827c35 (from https://www.piwheels.org/simple/abutils/)
2023-12-13T22:05:30,721 Skipping link: not a file: https://www.piwheels.org/simple/abutils/
2023-12-13T22:05:30,722 Skipping link: not a file: https://pypi.org/simple/abutils/
2023-12-13T22:05:30,743 Given no hashes to check 1 links for project 'abutils': discarding no candidates
2023-12-13T22:05:30,761 Collecting abutils==0.4.5
2023-12-13T22:05:30,764   Created temporary directory: /tmp/pip-unpack-vfwk6j2l
2023-12-13T22:05:30,988   Downloading abutils-0.4.5.tar.gz (93.8 MB)
2023-12-13T22:06:05,438   Added abutils==0.4.5 from https://files.pythonhosted.org/packages/14/ba/621da2e617c467936d12b7568b959ad5b15b2859ac421b5d7fdfdb9de6b8/abutils-0.4.5.tar.gz to build tracker '/tmp/pip-build-tracker-6pzyqgta'
2023-12-13T22:06:05,441   Running setup.py (path:/tmp/pip-wheel-zmz_e0k7/abutils_8841f2242ac64bc3a87effa4ec92fd24/setup.py) egg_info for package abutils
2023-12-13T22:06:05,442   Created temporary directory: /tmp/pip-pip-egg-info-xwgjpc2f
2023-12-13T22:06:05,443   Preparing metadata (setup.py): started
2023-12-13T22:06:05,444   Running command python setup.py egg_info
2023-12-13T22:06:05,963   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:472: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-12-13T22:06:05,963   !!

2023-12-13T22:06:05,964           ********************************************************************************
2023-12-13T22:06:05,965           Usage of dash-separated 'description-file' will not be supported in future
2023-12-13T22:06:05,965           versions. Please use the underscore name 'description_file' instead.

2023-12-13T22:06:05,966           By 2024-Sep-26, you need to update your project and remove deprecated calls
2023-12-13T22:06:05,967           or your builds will no longer be supported.

2023-12-13T22:06:05,967           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-12-13T22:06:05,968           ********************************************************************************

2023-12-13T22:06:05,969   !!
2023-12-13T22:06:05,969     opt = self.warn_dash_deprecation(opt, section)
2023-12-13T22:06:06,512   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:472: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-12-13T22:06:06,513   !!

2023-12-13T22:06:06,514           ********************************************************************************
2023-12-13T22:06:06,514           Usage of dash-separated 'description-file' will not be supported in future
2023-12-13T22:06:06,515           versions. Please use the underscore name 'description_file' instead.

2023-12-13T22:06:06,516           By 2024-Sep-26, you need to update your project and remove deprecated calls
2023-12-13T22:06:06,516           or your builds will no longer be supported.

2023-12-13T22:06:06,517           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-12-13T22:06:06,518           ********************************************************************************

2023-12-13T22:06:06,519   !!
2023-12-13T22:06:06,519     opt = self.warn_dash_deprecation(opt, section)
2023-12-13T22:06:06,552   running egg_info
2023-12-13T22:06:06,553   creating /tmp/pip-pip-egg-info-xwgjpc2f/abutils.egg-info
2023-12-13T22:06:06,577   writing /tmp/pip-pip-egg-info-xwgjpc2f/abutils.egg-info/PKG-INFO
2023-12-13T22:06:06,581   writing dependency_links to /tmp/pip-pip-egg-info-xwgjpc2f/abutils.egg-info/dependency_links.txt
2023-12-13T22:06:06,583   writing requirements to /tmp/pip-pip-egg-info-xwgjpc2f/abutils.egg-info/requires.txt
2023-12-13T22:06:06,584   writing top-level names to /tmp/pip-pip-egg-info-xwgjpc2f/abutils.egg-info/top_level.txt
2023-12-13T22:06:06,586   writing manifest file '/tmp/pip-pip-egg-info-xwgjpc2f/abutils.egg-info/SOURCES.txt'
2023-12-13T22:06:06,674   reading manifest file '/tmp/pip-pip-egg-info-xwgjpc2f/abutils.egg-info/SOURCES.txt'
2023-12-13T22:06:06,675   reading manifest template 'MANIFEST.in'
2023-12-13T22:06:06,680   warning: no files found matching 'abutils/tenx/*'
2023-12-13T22:06:06,685   warning: no files found matching 'abutils/bin/mafft_darwin_amd64/mafftdir/*'
2023-12-13T22:06:06,689   warning: no files found matching 'abutils/bin/mafft_darwin_arm64/mafftdir/*'
2023-12-13T22:06:06,693   warning: no files found matching 'abutils/bin/mafft_linux_amd64/mafftdir/*'
2023-12-13T22:06:06,696   adding license file 'LICENSE'
2023-12-13T22:06:06,704   writing manifest file '/tmp/pip-pip-egg-info-xwgjpc2f/abutils.egg-info/SOURCES.txt'
2023-12-13T22:06:06,809   Preparing metadata (setup.py): finished with status 'done'
2023-12-13T22:06:06,814   Source in /tmp/pip-wheel-zmz_e0k7/abutils_8841f2242ac64bc3a87effa4ec92fd24 has version 0.4.5, which satisfies requirement abutils==0.4.5 from https://files.pythonhosted.org/packages/14/ba/621da2e617c467936d12b7568b959ad5b15b2859ac421b5d7fdfdb9de6b8/abutils-0.4.5.tar.gz
2023-12-13T22:06:06,815   Removed abutils==0.4.5 from https://files.pythonhosted.org/packages/14/ba/621da2e617c467936d12b7568b959ad5b15b2859ac421b5d7fdfdb9de6b8/abutils-0.4.5.tar.gz from build tracker '/tmp/pip-build-tracker-6pzyqgta'
2023-12-13T22:06:06,822 Created temporary directory: /tmp/pip-unpack-c_rc8cua
2023-12-13T22:06:06,823 Created temporary directory: /tmp/pip-unpack-iqsy0jj_
2023-12-13T22:06:06,846 Building wheels for collected packages: abutils
2023-12-13T22:06:06,853   Created temporary directory: /tmp/pip-wheel-ib6gbi9q
2023-12-13T22:06:06,854   Building wheel for abutils (setup.py): started
2023-12-13T22:06:06,856   Destination directory: /tmp/pip-wheel-ib6gbi9q
2023-12-13T22:06:06,856   Running command python setup.py bdist_wheel
2023-12-13T22:06:07,310   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:472: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-12-13T22:06:07,310   !!

2023-12-13T22:06:07,311           ********************************************************************************
2023-12-13T22:06:07,312           Usage of dash-separated 'description-file' will not be supported in future
2023-12-13T22:06:07,312           versions. Please use the underscore name 'description_file' instead.

2023-12-13T22:06:07,313           By 2024-Sep-26, you need to update your project and remove deprecated calls
2023-12-13T22:06:07,313           or your builds will no longer be supported.

2023-12-13T22:06:07,314           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-12-13T22:06:07,315           ********************************************************************************

2023-12-13T22:06:07,316   !!
2023-12-13T22:06:07,316     opt = self.warn_dash_deprecation(opt, section)
2023-12-13T22:06:07,832   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:472: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-12-13T22:06:07,832   !!

2023-12-13T22:06:07,833           ********************************************************************************
2023-12-13T22:06:07,834           Usage of dash-separated 'description-file' will not be supported in future
2023-12-13T22:06:07,834           versions. Please use the underscore name 'description_file' instead.

2023-12-13T22:06:07,835           By 2024-Sep-26, you need to update your project and remove deprecated calls
2023-12-13T22:06:07,836           or your builds will no longer be supported.

2023-12-13T22:06:07,837           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-12-13T22:06:07,838           ********************************************************************************

2023-12-13T22:06:07,839   !!
2023-12-13T22:06:07,840     opt = self.warn_dash_deprecation(opt, section)
2023-12-13T22:06:07,865   running bdist_wheel
2023-12-13T22:06:07,960   running build
2023-12-13T22:06:07,960   running build_py
2023-12-13T22:06:07,987   creating build
2023-12-13T22:06:07,987   creating build/lib
2023-12-13T22:06:07,988   creating build/lib/abutils
2023-12-13T22:06:07,989   copying abutils/tl.py -> build/lib/abutils
2023-12-13T22:06:07,991   copying abutils/version.py -> build/lib/abutils
2023-12-13T22:06:07,993   copying abutils/io.py -> build/lib/abutils
2023-12-13T22:06:07,995   copying abutils/cl.py -> build/lib/abutils
2023-12-13T22:06:07,997   copying abutils/__init__.py -> build/lib/abutils
2023-12-13T22:06:07,999   copying abutils/pl.py -> build/lib/abutils
2023-12-13T22:06:08,002   creating build/lib/abutils/core
2023-12-13T22:06:08,003   copying abutils/core/sequence.py -> build/lib/abutils/core
2023-12-13T22:06:08,005   copying abutils/core/pair.py -> build/lib/abutils/core
2023-12-13T22:06:08,010   copying abutils/core/lineage.py -> build/lib/abutils/core
2023-12-13T22:06:08,013   copying abutils/core/__init__.py -> build/lib/abutils/core
2023-12-13T22:06:08,015   creating build/lib/abutils/tests
2023-12-13T22:06:08,016   copying abutils/tests/test_phylo.py -> build/lib/abutils/tests
2023-12-13T22:06:08,019   copying abutils/tests/test_utilities.py -> build/lib/abutils/tests
2023-12-13T22:06:08,021   copying abutils/tests/test_cluster.py -> build/lib/abutils/tests
2023-12-13T22:06:08,023   copying abutils/tests/test_clonify.py -> build/lib/abutils/tests
2023-12-13T22:06:08,025   copying abutils/tests/test_sequence.py -> build/lib/abutils/tests
2023-12-13T22:06:08,028   copying abutils/tests/test_color.py -> build/lib/abutils/tests
2023-12-13T22:06:08,030   copying abutils/tests/test_alignment.py -> build/lib/abutils/tests
2023-12-13T22:06:08,033   copying abutils/tests/__init__.py -> build/lib/abutils/tests
2023-12-13T22:06:08,034   copying abutils/tests/test_pair.py -> build/lib/abutils/tests
2023-12-13T22:06:08,037   creating build/lib/abutils/plots
2023-12-13T22:06:08,038   copying abutils/plots/base.py -> build/lib/abutils/plots
2023-12-13T22:06:08,040   copying abutils/plots/summary.py -> build/lib/abutils/plots
2023-12-13T22:06:08,043   copying abutils/plots/heatmap.py -> build/lib/abutils/plots
2023-12-13T22:06:08,045   copying abutils/plots/scatter.py -> build/lib/abutils/plots
2023-12-13T22:06:08,047   copying abutils/plots/ring.py -> build/lib/abutils/plots
2023-12-13T22:06:08,049   copying abutils/plots/lineage.py -> build/lib/abutils/plots
2023-12-13T22:06:08,052   copying abutils/plots/kde.py -> build/lib/abutils/plots
2023-12-13T22:06:08,055   copying abutils/plots/bar.py -> build/lib/abutils/plots
2023-12-13T22:06:08,057   copying abutils/plots/data.py -> build/lib/abutils/plots
2023-12-13T22:06:08,059   copying abutils/plots/ridge.py -> build/lib/abutils/plots
2023-12-13T22:06:08,062   copying abutils/plots/donut.py -> build/lib/abutils/plots
2023-12-13T22:06:08,064   copying abutils/plots/utils.py -> build/lib/abutils/plots
2023-12-13T22:06:08,066   copying abutils/plots/__init__.py -> build/lib/abutils/plots
2023-12-13T22:06:08,069   creating build/lib/abutils/utils
2023-12-13T22:06:08,070   copying abutils/utils/mongodb.py -> build/lib/abutils/utils
2023-12-13T22:06:08,073   copying abutils/utils/germlines.py -> build/lib/abutils/utils
2023-12-13T22:06:08,075   copying abutils/utils/codons.py -> build/lib/abutils/utils
2023-12-13T22:06:08,077   copying abutils/utils/phylogeny.py -> build/lib/abutils/utils
2023-12-13T22:06:08,080   copying abutils/utils/circos.py -> build/lib/abutils/utils
2023-12-13T22:06:08,082   copying abutils/utils/progbar.py -> build/lib/abutils/utils
2023-12-13T22:06:08,084   copying abutils/utils/pipeline.py -> build/lib/abutils/utils
2023-12-13T22:06:08,086   copying abutils/utils/log.py -> build/lib/abutils/utils
2023-12-13T22:06:08,087   copying abutils/utils/utilities.py -> build/lib/abutils/utils
2023-12-13T22:06:08,089   copying abutils/utils/cluster.py -> build/lib/abutils/utils
2023-12-13T22:06:08,092   copying abutils/utils/s3.py -> build/lib/abutils/utils
2023-12-13T22:06:08,095   copying abutils/utils/convert.py -> build/lib/abutils/utils
2023-12-13T22:06:08,097   copying abutils/utils/ssh_tunnel.py -> build/lib/abutils/utils
2023-12-13T22:06:08,099   copying abutils/utils/color.py -> build/lib/abutils/utils
2023-12-13T22:06:08,101   copying abutils/utils/alignment.py -> build/lib/abutils/utils
2023-12-13T22:06:08,105   copying abutils/utils/seqio.py -> build/lib/abutils/utils
2023-12-13T22:06:08,107   copying abutils/utils/__init__.py -> build/lib/abutils/utils
2023-12-13T22:06:08,109   copying abutils/utils/database.py -> build/lib/abutils/utils
2023-12-13T22:06:08,112   copying abutils/utils/decorators.py -> build/lib/abutils/utils
2023-12-13T22:06:08,113   copying abutils/utils/jobs.py -> build/lib/abutils/utils
2023-12-13T22:06:08,116   creating build/lib/abutils/tools
2023-12-13T22:06:08,117   copying abutils/tools/clonify.py -> build/lib/abutils/tools
2023-12-13T22:06:08,119   copying abutils/tools/cluster.py -> build/lib/abutils/tools
2023-12-13T22:06:08,122   copying abutils/tools/similarity.py -> build/lib/abutils/tools
2023-12-13T22:06:08,125   copying abutils/tools/phylo.py -> build/lib/abutils/tools
2023-12-13T22:06:08,128   copying abutils/tools/alignment.py -> build/lib/abutils/tools
2023-12-13T22:06:08,131   copying abutils/tools/__init__.py -> build/lib/abutils/tools
2023-12-13T22:06:08,133   creating build/lib/abutils/plots/models
2023-12-13T22:06:08,134   copying abutils/plots/models/data.py -> build/lib/abutils/plots/models
2023-12-13T22:06:08,137   copying abutils/plots/models/__init__.py -> build/lib/abutils/plots/models
2023-12-13T22:06:08,138   creating build/lib/abutils/plots/mixins
2023-12-13T22:06:08,139   copying abutils/plots/mixins/hue.py -> build/lib/abutils/plots/mixins
2023-12-13T22:06:08,141   copying abutils/plots/mixins/__init__.py -> build/lib/abutils/plots/mixins
2023-12-13T22:06:08,142   running egg_info
2023-12-13T22:06:08,199   writing abutils.egg-info/PKG-INFO
2023-12-13T22:06:08,202   writing dependency_links to abutils.egg-info/dependency_links.txt
2023-12-13T22:06:08,204   writing requirements to abutils.egg-info/requires.txt
2023-12-13T22:06:08,205   writing top-level names to abutils.egg-info/top_level.txt
2023-12-13T22:06:08,240   reading manifest file 'abutils.egg-info/SOURCES.txt'
2023-12-13T22:06:08,247   reading manifest template 'MANIFEST.in'
2023-12-13T22:06:08,251   warning: no files found matching 'abutils/tenx/*'
2023-12-13T22:06:08,254   warning: no files found matching 'abutils/bin/mafft_darwin_amd64/mafftdir/*'
2023-12-13T22:06:08,257   warning: no files found matching 'abutils/bin/mafft_darwin_arm64/mafftdir/*'
2023-12-13T22:06:08,260   warning: no files found matching 'abutils/bin/mafft_linux_amd64/mafftdir/*'
2023-12-13T22:06:08,263   adding license file 'LICENSE'
2023-12-13T22:06:08,274   writing manifest file 'abutils.egg-info/SOURCES.txt'
2023-12-13T22:06:08,277   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin' is absent from the `packages` configuration.
2023-12-13T22:06:08,278   !!

2023-12-13T22:06:08,279           ********************************************************************************
2023-12-13T22:06:08,279           ############################
2023-12-13T22:06:08,280           # Package would be ignored #
2023-12-13T22:06:08,280           ############################
2023-12-13T22:06:08,281           Python recognizes 'abutils.bin' as an importable package[^1],
2023-12-13T22:06:08,282           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,283           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,284           package, please make sure that 'abutils.bin' is explicitly added
2023-12-13T22:06:08,284           to the `packages` configuration field.

2023-12-13T22:06:08,285           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,286           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,286           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,287           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,289           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,290           If you don't want 'abutils.bin' to be distributed and are
2023-12-13T22:06:08,290           already explicitly excluding 'abutils.bin' via
2023-12-13T22:06:08,291           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,292           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,292           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,293           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,294           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,296           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,297                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,297                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,298                 directory, all directories are treated like packages.
2023-12-13T22:06:08,298           ********************************************************************************

2023-12-13T22:06:08,300   !!
2023-12-13T22:06:08,300     check.warn(importable)
2023-12-13T22:06:08,301   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin.mafft_darwin_amd64' is absent from the `packages` configuration.
2023-12-13T22:06:08,302   !!

2023-12-13T22:06:08,303           ********************************************************************************
2023-12-13T22:06:08,303           ############################
2023-12-13T22:06:08,304           # Package would be ignored #
2023-12-13T22:06:08,304           ############################
2023-12-13T22:06:08,305           Python recognizes 'abutils.bin.mafft_darwin_amd64' as an importable package[^1],
2023-12-13T22:06:08,305           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,306           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,307           package, please make sure that 'abutils.bin.mafft_darwin_amd64' is explicitly added
2023-12-13T22:06:08,307           to the `packages` configuration field.

2023-12-13T22:06:08,308           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,309           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,309           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,310           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,311           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,312           If you don't want 'abutils.bin.mafft_darwin_amd64' to be distributed and are
2023-12-13T22:06:08,312           already explicitly excluding 'abutils.bin.mafft_darwin_amd64' via
2023-12-13T22:06:08,313           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,314           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,314           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,315           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,317           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,318           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,319                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,320                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,320                 directory, all directories are treated like packages.
2023-12-13T22:06:08,321           ********************************************************************************

2023-12-13T22:06:08,322   !!
2023-12-13T22:06:08,323     check.warn(importable)
2023-12-13T22:06:08,323   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin.mafft_darwin_amd64.mafftdir.bin' is absent from the `packages` configuration.
2023-12-13T22:06:08,324   !!

2023-12-13T22:06:08,325           ********************************************************************************
2023-12-13T22:06:08,326           ############################
2023-12-13T22:06:08,326           # Package would be ignored #
2023-12-13T22:06:08,327           ############################
2023-12-13T22:06:08,328           Python recognizes 'abutils.bin.mafft_darwin_amd64.mafftdir.bin' as an importable package[^1],
2023-12-13T22:06:08,328           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,329           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,330           package, please make sure that 'abutils.bin.mafft_darwin_amd64.mafftdir.bin' is explicitly added
2023-12-13T22:06:08,331           to the `packages` configuration field.

2023-12-13T22:06:08,332           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,333           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,334           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,335           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,336           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,337           If you don't want 'abutils.bin.mafft_darwin_amd64.mafftdir.bin' to be distributed and are
2023-12-13T22:06:08,337           already explicitly excluding 'abutils.bin.mafft_darwin_amd64.mafftdir.bin' via
2023-12-13T22:06:08,338           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,338           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,339           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,340           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,341           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,343           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,344                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,344                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,345                 directory, all directories are treated like packages.
2023-12-13T22:06:08,345           ********************************************************************************

2023-12-13T22:06:08,346   !!
2023-12-13T22:06:08,347     check.warn(importable)
2023-12-13T22:06:08,347   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin.mafft_darwin_amd64.mafftdir.libexec' is absent from the `packages` configuration.
2023-12-13T22:06:08,348   !!

2023-12-13T22:06:08,349           ********************************************************************************
2023-12-13T22:06:08,350           ############################
2023-12-13T22:06:08,352           # Package would be ignored #
2023-12-13T22:06:08,352           ############################
2023-12-13T22:06:08,353           Python recognizes 'abutils.bin.mafft_darwin_amd64.mafftdir.libexec' as an importable package[^1],
2023-12-13T22:06:08,354           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,355           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,356           package, please make sure that 'abutils.bin.mafft_darwin_amd64.mafftdir.libexec' is explicitly added
2023-12-13T22:06:08,356           to the `packages` configuration field.

2023-12-13T22:06:08,357           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,358           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,358           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,361           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,364           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,365           If you don't want 'abutils.bin.mafft_darwin_amd64.mafftdir.libexec' to be distributed and are
2023-12-13T22:06:08,365           already explicitly excluding 'abutils.bin.mafft_darwin_amd64.mafftdir.libexec' via
2023-12-13T22:06:08,366           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,366           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,367           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,369           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,370           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,371           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,372                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,373                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,373                 directory, all directories are treated like packages.
2023-12-13T22:06:08,374           ********************************************************************************

2023-12-13T22:06:08,374   !!
2023-12-13T22:06:08,375     check.warn(importable)
2023-12-13T22:06:08,375   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin.mafft_darwin_arm64' is absent from the `packages` configuration.
2023-12-13T22:06:08,375   !!

2023-12-13T22:06:08,376           ********************************************************************************
2023-12-13T22:06:08,377           ############################
2023-12-13T22:06:08,377           # Package would be ignored #
2023-12-13T22:06:08,378           ############################
2023-12-13T22:06:08,378           Python recognizes 'abutils.bin.mafft_darwin_arm64' as an importable package[^1],
2023-12-13T22:06:08,379           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,380           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,380           package, please make sure that 'abutils.bin.mafft_darwin_arm64' is explicitly added
2023-12-13T22:06:08,381           to the `packages` configuration field.

2023-12-13T22:06:08,382           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,382           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,382           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,384           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,385           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,386           If you don't want 'abutils.bin.mafft_darwin_arm64' to be distributed and are
2023-12-13T22:06:08,387           already explicitly excluding 'abutils.bin.mafft_darwin_arm64' via
2023-12-13T22:06:08,387           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,388           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,388           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,389           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,391           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,392           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,393                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,394                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,394                 directory, all directories are treated like packages.
2023-12-13T22:06:08,395           ********************************************************************************

2023-12-13T22:06:08,396   !!
2023-12-13T22:06:08,396     check.warn(importable)
2023-12-13T22:06:08,397   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin.mafft_darwin_arm64.mafftdir.bin' is absent from the `packages` configuration.
2023-12-13T22:06:08,398   !!

2023-12-13T22:06:08,399           ********************************************************************************
2023-12-13T22:06:08,399           ############################
2023-12-13T22:06:08,400           # Package would be ignored #
2023-12-13T22:06:08,401           ############################
2023-12-13T22:06:08,401           Python recognizes 'abutils.bin.mafft_darwin_arm64.mafftdir.bin' as an importable package[^1],
2023-12-13T22:06:08,402           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,403           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,404           package, please make sure that 'abutils.bin.mafft_darwin_arm64.mafftdir.bin' is explicitly added
2023-12-13T22:06:08,404           to the `packages` configuration field.

2023-12-13T22:06:08,405           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,406           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,406           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,407           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,408           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,409           If you don't want 'abutils.bin.mafft_darwin_arm64.mafftdir.bin' to be distributed and are
2023-12-13T22:06:08,409           already explicitly excluding 'abutils.bin.mafft_darwin_arm64.mafftdir.bin' via
2023-12-13T22:06:08,410           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,410           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,411           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,412           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,413           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,420           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,434                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,455                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,484                 directory, all directories are treated like packages.
2023-12-13T22:06:08,488           ********************************************************************************

2023-12-13T22:06:08,489   !!
2023-12-13T22:06:08,490     check.warn(importable)
2023-12-13T22:06:08,490   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin.mafft_darwin_arm64.mafftdir.libexec' is absent from the `packages` configuration.
2023-12-13T22:06:08,491   !!

2023-12-13T22:06:08,492           ********************************************************************************
2023-12-13T22:06:08,493           ############################
2023-12-13T22:06:08,494           # Package would be ignored #
2023-12-13T22:06:08,495           ############################
2023-12-13T22:06:08,495           Python recognizes 'abutils.bin.mafft_darwin_arm64.mafftdir.libexec' as an importable package[^1],
2023-12-13T22:06:08,496           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,497           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,498           package, please make sure that 'abutils.bin.mafft_darwin_arm64.mafftdir.libexec' is explicitly added
2023-12-13T22:06:08,499           to the `packages` configuration field.

2023-12-13T22:06:08,500           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,501           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,502           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,503           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,505           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,506           If you don't want 'abutils.bin.mafft_darwin_arm64.mafftdir.libexec' to be distributed and are
2023-12-13T22:06:08,507           already explicitly excluding 'abutils.bin.mafft_darwin_arm64.mafftdir.libexec' via
2023-12-13T22:06:08,508           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,509           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,509           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,510           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,511           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,513           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,513                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,514                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,514                 directory, all directories are treated like packages.
2023-12-13T22:06:08,515           ********************************************************************************

2023-12-13T22:06:08,516   !!
2023-12-13T22:06:08,516     check.warn(importable)
2023-12-13T22:06:08,517   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin.mafft_linux_amd64' is absent from the `packages` configuration.
2023-12-13T22:06:08,517   !!

2023-12-13T22:06:08,519           ********************************************************************************
2023-12-13T22:06:08,519           ############################
2023-12-13T22:06:08,520           # Package would be ignored #
2023-12-13T22:06:08,520           ############################
2023-12-13T22:06:08,521           Python recognizes 'abutils.bin.mafft_linux_amd64' as an importable package[^1],
2023-12-13T22:06:08,521           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,523           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,523           package, please make sure that 'abutils.bin.mafft_linux_amd64' is explicitly added
2023-12-13T22:06:08,524           to the `packages` configuration field.

2023-12-13T22:06:08,526           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,526           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,527           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,529           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,530           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,531           If you don't want 'abutils.bin.mafft_linux_amd64' to be distributed and are
2023-12-13T22:06:08,532           already explicitly excluding 'abutils.bin.mafft_linux_amd64' via
2023-12-13T22:06:08,533           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,533           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,534           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,535           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,537           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,539           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,540                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,541                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,542                 directory, all directories are treated like packages.
2023-12-13T22:06:08,543           ********************************************************************************

2023-12-13T22:06:08,545   !!
2023-12-13T22:06:08,546     check.warn(importable)
2023-12-13T22:06:08,547   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin.mafft_linux_amd64.mafftdir.bin' is absent from the `packages` configuration.
2023-12-13T22:06:08,549   !!

2023-12-13T22:06:08,551           ********************************************************************************
2023-12-13T22:06:08,552           ############################
2023-12-13T22:06:08,552           # Package would be ignored #
2023-12-13T22:06:08,553           ############################
2023-12-13T22:06:08,553           Python recognizes 'abutils.bin.mafft_linux_amd64.mafftdir.bin' as an importable package[^1],
2023-12-13T22:06:08,554           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,554           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,555           package, please make sure that 'abutils.bin.mafft_linux_amd64.mafftdir.bin' is explicitly added
2023-12-13T22:06:08,555           to the `packages` configuration field.

2023-12-13T22:06:08,556           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,557           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,557           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,558           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,559           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,561           If you don't want 'abutils.bin.mafft_linux_amd64.mafftdir.bin' to be distributed and are
2023-12-13T22:06:08,561           already explicitly excluding 'abutils.bin.mafft_linux_amd64.mafftdir.bin' via
2023-12-13T22:06:08,562           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,562           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,563           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,565           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,612           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,614           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,614                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,615                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,616                 directory, all directories are treated like packages.
2023-12-13T22:06:08,616           ********************************************************************************

2023-12-13T22:06:08,618   !!
2023-12-13T22:06:08,618     check.warn(importable)
2023-12-13T22:06:08,619   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.bin.mafft_linux_amd64.mafftdir.libexec' is absent from the `packages` configuration.
2023-12-13T22:06:08,619   !!

2023-12-13T22:06:08,620           ********************************************************************************
2023-12-13T22:06:08,621           ############################
2023-12-13T22:06:08,621           # Package would be ignored #
2023-12-13T22:06:08,622           ############################
2023-12-13T22:06:08,622           Python recognizes 'abutils.bin.mafft_linux_amd64.mafftdir.libexec' as an importable package[^1],
2023-12-13T22:06:08,623           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,624           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,625           package, please make sure that 'abutils.bin.mafft_linux_amd64.mafftdir.libexec' is explicitly added
2023-12-13T22:06:08,625           to the `packages` configuration field.

2023-12-13T22:06:08,627           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,627           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,628           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,629           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,630           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,631           If you don't want 'abutils.bin.mafft_linux_amd64.mafftdir.libexec' to be distributed and are
2023-12-13T22:06:08,631           already explicitly excluding 'abutils.bin.mafft_linux_amd64.mafftdir.libexec' via
2023-12-13T22:06:08,632           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,632           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,633           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,634           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,635           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:08,636           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:08,637                 even if it does not contain any `.py` files.
2023-12-13T22:06:08,637                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:08,638                 directory, all directories are treated like packages.
2023-12-13T22:06:08,638           ********************************************************************************

2023-12-13T22:06:08,639   !!
2023-12-13T22:06:08,640     check.warn(importable)
2023-12-13T22:06:08,640   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'abutils.utils.matrices' is absent from the `packages` configuration.
2023-12-13T22:06:08,641   !!

2023-12-13T22:06:08,642           ********************************************************************************
2023-12-13T22:06:08,643           ############################
2023-12-13T22:06:08,643           # Package would be ignored #
2023-12-13T22:06:08,644           ############################
2023-12-13T22:06:08,644           Python recognizes 'abutils.utils.matrices' as an importable package[^1],
2023-12-13T22:06:08,645           but it is absent from setuptools' `packages` configuration.

2023-12-13T22:06:08,646           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-13T22:06:08,647           package, please make sure that 'abutils.utils.matrices' is explicitly added
2023-12-13T22:06:08,647           to the `packages` configuration field.

2023-12-13T22:06:08,648           Alternatively, you can also rely on setuptools' discovery methods
2023-12-13T22:06:08,649           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-13T22:06:08,659           instead of `find_packages(...)`/`find:`).

2023-12-13T22:06:08,721           You can read more about "package discovery" on setuptools documentation page:

2023-12-13T22:06:08,733           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-13T22:06:08,737           If you don't want 'abutils.utils.matrices' to be distributed and are
2023-12-13T22:06:08,738           already explicitly excluding 'abutils.utils.matrices' via
2023-12-13T22:06:08,741           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-13T22:06:08,752           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-13T22:06:08,777           combination with a more fine grained `package-data` configuration.

2023-12-13T22:06:08,904           You can read more about "package data files" on setuptools documentation page:

2023-12-13T22:06:08,916           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-13T22:06:09,011           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-13T22:06:09,027                 even if it does not contain any `.py` files.
2023-12-13T22:06:09,030                 On the other hand, currently there is no concept of package data
2023-12-13T22:06:09,030                 directory, all directories are treated like packages.
2023-12-13T22:06:09,031           ********************************************************************************

2023-12-13T22:06:09,031   !!
2023-12-13T22:06:09,032     check.warn(importable)
2023-12-13T22:06:09,032   creating build/lib/abutils/bin
2023-12-13T22:06:09,032   copying abutils/bin/cdhit_darwin_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,033   copying abutils/bin/cdhit_darwin_arm64 -> build/lib/abutils/bin
2023-12-13T22:06:09,033   copying abutils/bin/cdhit_linux_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,033   copying abutils/bin/fasttree_darwin_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,034   copying abutils/bin/fasttree_darwin_arm64 -> build/lib/abutils/bin
2023-12-13T22:06:09,034   copying abutils/bin/fasttree_linux_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,035   copying abutils/bin/mafft_darwin -> build/lib/abutils/bin
2023-12-13T22:06:09,035   copying abutils/bin/mafft_linux -> build/lib/abutils/bin
2023-12-13T22:06:09,035   copying abutils/bin/mmseqs_darwin_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,036   copying abutils/bin/mmseqs_darwin_arm64 -> build/lib/abutils/bin
2023-12-13T22:06:09,045   copying abutils/bin/mmseqs_linux_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,714   copying abutils/bin/muscle3_darwin -> build/lib/abutils/bin
2023-12-13T22:06:09,723   copying abutils/bin/muscle3_linux -> build/lib/abutils/bin
2023-12-13T22:06:09,731   copying abutils/bin/muscle_darwin_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,748   copying abutils/bin/muscle_darwin_arm64 -> build/lib/abutils/bin
2023-12-13T22:06:09,763   copying abutils/bin/muscle_linux_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,815   copying abutils/bin/vsearch_darwin_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,825   copying abutils/bin/vsearch_darwin_arm64 -> build/lib/abutils/bin
2023-12-13T22:06:09,836   copying abutils/bin/vsearch_linux_amd64 -> build/lib/abutils/bin
2023-12-13T22:06:09,868   creating build/lib/abutils/bin/mafft_darwin_amd64
2023-12-13T22:06:09,869   copying abutils/bin/mafft_darwin_amd64/in -> build/lib/abutils/bin/mafft_darwin_amd64
2023-12-13T22:06:09,871   copying abutils/bin/mafft_darwin_amd64/mafft.bat -> build/lib/abutils/bin/mafft_darwin_amd64
2023-12-13T22:06:09,873   creating build/lib/abutils/bin/mafft_darwin_amd64/mafftdir
2023-12-13T22:06:09,874   creating build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/bin
2023-12-13T22:06:09,875   copying abutils/bin/mafft_darwin_amd64/mafftdir/bin/mafft -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/bin
2023-12-13T22:06:09,879   creating build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:09,880   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/addsingle -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:09,907   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/contrafoldwrap -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:09,924   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/countlen -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:09,932   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dash_client -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,129   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/disttbfast -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,155   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dndblast -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,174   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dndfast7 -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,191   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dndpre -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,207   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dvtditr -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,235   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/f2cl -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,245   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/filter -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,262   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/getlag -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,290   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/hex2maffttext -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,295   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft-distance -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,310   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft-homologs.1 -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,313   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft-profile -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,337   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft.1 -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,339   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafftash_premafft.pl -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,342   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/maffttext2hex -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,347   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/makedirectionlist -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,373   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mccaskillwrap -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,389   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/multi2hat3s -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,408   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/nodepair -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,435   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/pairash -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,460   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/pairlocalalign -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,494   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/regtable2seq -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,508   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/replaceu -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,744   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/restoreu -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,757   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/score -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,772   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/seekquencer_premafft.pl -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,775   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/seq2regtable -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,785   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/setcore -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,814   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/setdirection -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,829   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/sextet5 -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,846   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/splittbfast -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,872   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/tbfast -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,905   copying abutils/bin/mafft_darwin_amd64/mafftdir/libexec/version -> build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:10,909   creating build/lib/abutils/bin/mafft_darwin_arm64
2023-12-13T22:06:10,910   copying abutils/bin/mafft_darwin_arm64/in -> build/lib/abutils/bin/mafft_darwin_arm64
2023-12-13T22:06:10,912   copying abutils/bin/mafft_darwin_arm64/mafft.bat -> build/lib/abutils/bin/mafft_darwin_arm64
2023-12-13T22:06:10,914   creating build/lib/abutils/bin/mafft_darwin_arm64/mafftdir
2023-12-13T22:06:10,914   creating build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/bin
2023-12-13T22:06:10,915   copying abutils/bin/mafft_darwin_arm64/mafftdir/bin/mafft -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/bin
2023-12-13T22:06:10,919   creating build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:10,920   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/addsingle -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:10,947   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/contrafoldwrap -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:10,963   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/countlen -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:10,971   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dash_client -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,159   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/disttbfast -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,185   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dndblast -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,202   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dndfast7 -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,219   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dndpre -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,236   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dvtditr -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,262   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/f2cl -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,271   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/filter -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,289   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/getlag -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,329   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/hex2maffttext -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,333   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft-distance -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,351   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft-homologs.1 -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,353   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft-profile -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,382   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft.1 -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,385   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafftash_premafft.pl -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,387   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/maffttext2hex -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,392   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/makedirectionlist -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,421   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mccaskillwrap -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,436   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/multi2hat3s -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,453   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/nodepair -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,480   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/pairash -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,504   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/pairlocalalign -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,531   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/regtable2seq -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,546   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/replaceu -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,560   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/restoreu -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,572   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/score -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,588   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/seekquencer_premafft.pl -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,591   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/seq2regtable -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,600   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/setcore -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,626   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/setdirection -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,640   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/sextet5 -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,658   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/splittbfast -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,690   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/tbfast -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,722   copying abutils/bin/mafft_darwin_arm64/mafftdir/libexec/version -> build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:11,727   creating build/lib/abutils/bin/mafft_linux_amd64
2023-12-13T22:06:11,727   copying abutils/bin/mafft_linux_amd64/mafft.bat -> build/lib/abutils/bin/mafft_linux_amd64
2023-12-13T22:06:11,729   creating build/lib/abutils/bin/mafft_linux_amd64/mafftdir
2023-12-13T22:06:11,730   creating build/lib/abutils/bin/mafft_linux_amd64/mafftdir/bin
2023-12-13T22:06:11,731   copying abutils/bin/mafft_linux_amd64/mafftdir/bin/mafft -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/bin
2023-12-13T22:06:11,736   creating build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,737   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/addsingle -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,770   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/contrafoldwrap -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,790   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/countlen -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,801   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/dash_alignments -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,806   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/dash_client -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,872   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/dash_sequences.fa -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,874   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/disttbfast -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,897   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/dndblast -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,914   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/dndfast7 -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,930   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/dndpre -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,947   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/dvtditr -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,972   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/f2cl -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:11,985   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/filter -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,002   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/getlag -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,023   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/hat3 -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,025   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/hex2maffttext -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,037   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft-distance -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,054   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft-homologs.1 -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,056   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft-profile -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,077   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft.1 -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,080   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafftash_premafft.pl -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,083   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/maffttext2hex -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,093   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/makedirectionlist -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,117   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/mccaskillwrap -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,137   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/multi2hat3s -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,155   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/nodepair -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,176   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/pairash -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,197   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/pairlocalalign -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,216   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/regtable2seq -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,231   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/replaceu -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,246   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/restoreu -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,262   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/score -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,278   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/seekquencer_premafft.pl -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,282   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/seq2regtable -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,294   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/setcore -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,315   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/setdirection -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,331   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/sextet5 -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,347   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/splittbfast -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,367   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/tbfast -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,388   copying abutils/bin/mafft_linux_amd64/mafftdir/libexec/version -> build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:12,399   creating build/lib/abutils/utils/matrices
2023-12-13T22:06:12,400   copying abutils/utils/matrices/blosum62 -> build/lib/abutils/utils/matrices
2023-12-13T22:06:12,403   copying abutils/utils/matrices/match1mismatch0 -> build/lib/abutils/utils/matrices
2023-12-13T22:06:12,405   copying abutils/utils/matrices/match3mismatch2 -> build/lib/abutils/utils/matrices
2023-12-13T22:06:12,435   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-12-13T22:06:12,436   !!

2023-12-13T22:06:12,437           ********************************************************************************
2023-12-13T22:06:12,438           Please avoid running ``setup.py`` directly.
2023-12-13T22:06:12,438           Instead, use pypa/build, pypa/installer or other
2023-12-13T22:06:12,439           standards-based tools.

2023-12-13T22:06:12,440           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-12-13T22:06:12,440           ********************************************************************************

2023-12-13T22:06:12,441   !!
2023-12-13T22:06:12,442     self.initialize_options()
2023-12-13T22:06:12,460   installing to build/bdist.linux-armv7l/wheel
2023-12-13T22:06:12,461   running install
2023-12-13T22:06:12,484   running install_lib
2023-12-13T22:06:12,508   creating build/bdist.linux-armv7l
2023-12-13T22:06:12,508   creating build/bdist.linux-armv7l/wheel
2023-12-13T22:06:12,510   creating build/bdist.linux-armv7l/wheel/abutils
2023-12-13T22:06:12,511   copying build/lib/abutils/tl.py -> build/bdist.linux-armv7l/wheel/abutils
2023-12-13T22:06:12,513   copying build/lib/abutils/version.py -> build/bdist.linux-armv7l/wheel/abutils
2023-12-13T22:06:12,515   creating build/bdist.linux-armv7l/wheel/abutils/core
2023-12-13T22:06:12,516   copying build/lib/abutils/core/sequence.py -> build/bdist.linux-armv7l/wheel/abutils/core
2023-12-13T22:06:12,519   copying build/lib/abutils/core/pair.py -> build/bdist.linux-armv7l/wheel/abutils/core
2023-12-13T22:06:12,522   copying build/lib/abutils/core/lineage.py -> build/bdist.linux-armv7l/wheel/abutils/core
2023-12-13T22:06:12,525   copying build/lib/abutils/core/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/core
2023-12-13T22:06:12,527   creating build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,528   copying build/lib/abutils/tests/test_phylo.py -> build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,530   copying build/lib/abutils/tests/test_utilities.py -> build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,532   copying build/lib/abutils/tests/test_cluster.py -> build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,534   copying build/lib/abutils/tests/test_clonify.py -> build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,537   copying build/lib/abutils/tests/test_sequence.py -> build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,539   copying build/lib/abutils/tests/test_color.py -> build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,541   copying build/lib/abutils/tests/test_alignment.py -> build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,544   copying build/lib/abutils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,545   copying build/lib/abutils/tests/test_pair.py -> build/bdist.linux-armv7l/wheel/abutils/tests
2023-12-13T22:06:12,548   creating build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:12,549   copying build/lib/abutils/bin/muscle3_linux -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:12,556   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64
2023-12-13T22:06:12,557   copying build/lib/abutils/bin/mafft_darwin_amd64/in -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64
2023-12-13T22:06:12,559   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir
2023-12-13T22:06:12,561   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,562   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/setcore -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,588   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/contrafoldwrap -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,604   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/disttbfast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,629   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft-homologs.1 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,631   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/seekquencer_premafft.pl -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,634   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/sextet5 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,651   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/setdirection -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,667   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/filter -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,682   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/f2cl -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,724   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dndfast7 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,748   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/nodepair -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,790   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft-distance -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,813   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/restoreu -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,836   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafftash_premafft.pl -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,839   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft.1 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,842   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/multi2hat3s -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,861   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mccaskillwrap -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,876   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dndpre -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,892   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/maffttext2hex -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,897   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/splittbfast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,920   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/hex2maffttext -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,924   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/addsingle -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,951   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/version -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:12,955   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dash_client -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,155   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/regtable2seq -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,168   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft-profile -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,195   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/seq2regtable -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,203   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/countlen -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,210   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/tbfast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,240   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dndblast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,257   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/pairlocalalign -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,285   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/pairash -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,311   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/getlag -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,337   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/score -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,355   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/replaceu -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,370   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dvtditr -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,399   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/libexec/makedirectionlist -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/libexec
2023-12-13T22:06:13,427   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/bin
2023-12-13T22:06:13,429   copying build/lib/abutils/bin/mafft_darwin_amd64/mafftdir/bin/mafft -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64/mafftdir/bin
2023-12-13T22:06:13,432   copying build/lib/abutils/bin/mafft_darwin_amd64/mafft.bat -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_amd64
2023-12-13T22:06:13,434   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64
2023-12-13T22:06:13,436   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir
2023-12-13T22:06:13,438   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,438   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/setcore -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,460   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/contrafoldwrap -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,559   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/disttbfast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,579   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft-homologs.1 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,582   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/dash_alignments -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,586   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/seekquencer_premafft.pl -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,589   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/sextet5 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,607   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/setdirection -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,625   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/filter -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,643   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/f2cl -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,657   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/dndfast7 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,676   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/nodepair -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,698   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft-distance -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,715   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/restoreu -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,729   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafftash_premafft.pl -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,732   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft.1 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,734   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/multi2hat3s -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,752   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/mccaskillwrap -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,769   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/dndpre -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,788   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/maffttext2hex -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,799   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/splittbfast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:13,821   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/hex2maffttext -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,615   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/addsingle -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,665   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/version -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,685   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/hat3 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,688   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/dash_client -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,803   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/regtable2seq -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,823   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft-profile -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,859   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/seq2regtable -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,878   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/dash_sequences.fa -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,882   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/countlen -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,903   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/tbfast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,939   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/dndblast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,967   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/pairlocalalign -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:14,994   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/pairash -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:15,020   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/getlag -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:15,048   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/score -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:15,070   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/replaceu -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:15,090   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/dvtditr -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:15,131   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/libexec/makedirectionlist -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/libexec
2023-12-13T22:06:15,161   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/bin
2023-12-13T22:06:15,162   copying build/lib/abutils/bin/mafft_linux_amd64/mafftdir/bin/mafft -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64/mafftdir/bin
2023-12-13T22:06:15,167   copying build/lib/abutils/bin/mafft_linux_amd64/mafft.bat -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_linux_amd64
2023-12-13T22:06:15,169   copying build/lib/abutils/bin/vsearch_darwin_arm64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:15,179   copying build/lib/abutils/bin/fasttree_linux_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:15,189   copying build/lib/abutils/bin/muscle_darwin_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:15,215   copying build/lib/abutils/bin/mafft_linux -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:15,222   copying build/lib/abutils/bin/fasttree_darwin_arm64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:15,234   copying build/lib/abutils/bin/mafft_darwin -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:15,239   copying build/lib/abutils/bin/mmseqs_darwin_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:15,380   copying build/lib/abutils/bin/vsearch_darwin_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:15,393   copying build/lib/abutils/bin/mmseqs_darwin_arm64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:17,357   copying build/lib/abutils/bin/cdhit_darwin_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:17,362   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64
2023-12-13T22:06:17,363   copying build/lib/abutils/bin/mafft_darwin_arm64/in -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64
2023-12-13T22:06:17,366   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir
2023-12-13T22:06:17,368   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,369   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/setcore -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,397   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/contrafoldwrap -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,414   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/disttbfast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,456   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft-homologs.1 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,459   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/seekquencer_premafft.pl -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,461   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/sextet5 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,481   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/setdirection -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,497   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/filter -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,511   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/f2cl -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,522   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dndfast7 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,540   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/nodepair -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,575   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft-distance -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,593   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/restoreu -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,606   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafftash_premafft.pl -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,609   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft.1 -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,611   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/multi2hat3s -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,633   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mccaskillwrap -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,650   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dndpre -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,669   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/maffttext2hex -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,674   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/splittbfast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,704   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/hex2maffttext -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,709   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/addsingle -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,740   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/version -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,745   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dash_client -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,930   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/regtable2seq -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,944   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft-profile -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,972   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/seq2regtable -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,981   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/countlen -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:17,989   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/tbfast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:18,024   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dndblast -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:18,043   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/pairlocalalign -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:18,068   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/pairash -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:18,094   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/getlag -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:18,119   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/score -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:18,136   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/replaceu -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:18,151   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dvtditr -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:18,183   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/libexec/makedirectionlist -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/libexec
2023-12-13T22:06:18,209   creating build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/bin
2023-12-13T22:06:18,210   copying build/lib/abutils/bin/mafft_darwin_arm64/mafftdir/bin/mafft -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64/mafftdir/bin
2023-12-13T22:06:18,214   copying build/lib/abutils/bin/mafft_darwin_arm64/mafft.bat -> build/bdist.linux-armv7l/wheel/abutils/bin/mafft_darwin_arm64
2023-12-13T22:06:18,216   copying build/lib/abutils/bin/muscle_darwin_arm64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:18,232   copying build/lib/abutils/bin/muscle3_darwin -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:18,241   copying build/lib/abutils/bin/vsearch_linux_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:18,274   copying build/lib/abutils/bin/mmseqs_linux_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:18,941   copying build/lib/abutils/bin/cdhit_darwin_arm64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:18,946   copying build/lib/abutils/bin/muscle_linux_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:18,993   copying build/lib/abutils/bin/fasttree_darwin_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:19,000   copying build/lib/abutils/bin/cdhit_linux_amd64 -> build/bdist.linux-armv7l/wheel/abutils/bin
2023-12-13T22:06:19,005   creating build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,006   copying build/lib/abutils/plots/base.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,009   copying build/lib/abutils/plots/summary.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,011   copying build/lib/abutils/plots/heatmap.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,014   copying build/lib/abutils/plots/scatter.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,017   creating build/bdist.linux-armv7l/wheel/abutils/plots/models
2023-12-13T22:06:19,018   copying build/lib/abutils/plots/models/data.py -> build/bdist.linux-armv7l/wheel/abutils/plots/models
2023-12-13T22:06:19,022   copying build/lib/abutils/plots/models/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/plots/models
2023-12-13T22:06:19,023   copying build/lib/abutils/plots/ring.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,026   copying build/lib/abutils/plots/lineage.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,029   copying build/lib/abutils/plots/kde.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,032   copying build/lib/abutils/plots/bar.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,035   copying build/lib/abutils/plots/data.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,037   copying build/lib/abutils/plots/ridge.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,040   creating build/bdist.linux-armv7l/wheel/abutils/plots/mixins
2023-12-13T22:06:19,041   copying build/lib/abutils/plots/mixins/hue.py -> build/bdist.linux-armv7l/wheel/abutils/plots/mixins
2023-12-13T22:06:19,043   copying build/lib/abutils/plots/mixins/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/plots/mixins
2023-12-13T22:06:19,044   copying build/lib/abutils/plots/donut.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,047   copying build/lib/abutils/plots/utils.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,049   copying build/lib/abutils/plots/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/plots
2023-12-13T22:06:19,051   creating build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,052   copying build/lib/abutils/utils/mongodb.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,055   copying build/lib/abutils/utils/germlines.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,057   copying build/lib/abutils/utils/codons.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,059   copying build/lib/abutils/utils/phylogeny.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,062   copying build/lib/abutils/utils/circos.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,064   copying build/lib/abutils/utils/progbar.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,066   copying build/lib/abutils/utils/pipeline.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,068   copying build/lib/abutils/utils/log.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,070   copying build/lib/abutils/utils/utilities.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,072   copying build/lib/abutils/utils/cluster.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,074   copying build/lib/abutils/utils/s3.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,077   copying build/lib/abutils/utils/convert.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,078   copying build/lib/abutils/utils/ssh_tunnel.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,081   copying build/lib/abutils/utils/color.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,083   copying build/lib/abutils/utils/alignment.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,087   copying build/lib/abutils/utils/seqio.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,089   copying build/lib/abutils/utils/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,091   copying build/lib/abutils/utils/database.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,094   creating build/bdist.linux-armv7l/wheel/abutils/utils/matrices
2023-12-13T22:06:19,095   copying build/lib/abutils/utils/matrices/match3mismatch2 -> build/bdist.linux-armv7l/wheel/abutils/utils/matrices
2023-12-13T22:06:19,097   copying build/lib/abutils/utils/matrices/match1mismatch0 -> build/bdist.linux-armv7l/wheel/abutils/utils/matrices
2023-12-13T22:06:19,099   copying build/lib/abutils/utils/matrices/blosum62 -> build/bdist.linux-armv7l/wheel/abutils/utils/matrices
2023-12-13T22:06:19,101   copying build/lib/abutils/utils/decorators.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,104   copying build/lib/abutils/utils/jobs.py -> build/bdist.linux-armv7l/wheel/abutils/utils
2023-12-13T22:06:19,106   creating build/bdist.linux-armv7l/wheel/abutils/tools
2023-12-13T22:06:19,107   copying build/lib/abutils/tools/clonify.py -> build/bdist.linux-armv7l/wheel/abutils/tools
2023-12-13T22:06:19,110   copying build/lib/abutils/tools/cluster.py -> build/bdist.linux-armv7l/wheel/abutils/tools
2023-12-13T22:06:19,113   copying build/lib/abutils/tools/similarity.py -> build/bdist.linux-armv7l/wheel/abutils/tools
2023-12-13T22:06:19,115   copying build/lib/abutils/tools/phylo.py -> build/bdist.linux-armv7l/wheel/abutils/tools
2023-12-13T22:06:19,118   copying build/lib/abutils/tools/alignment.py -> build/bdist.linux-armv7l/wheel/abutils/tools
2023-12-13T22:06:19,122   copying build/lib/abutils/tools/__init__.py -> build/bdist.linux-armv7l/wheel/abutils/tools
2023-12-13T22:06:19,123   copying build/lib/abutils/io.py -> build/bdist.linux-armv7l/wheel/abutils
2023-12-13T22:06:19,125   copying build/lib/abutils/cl.py -> build/bdist.linux-armv7l/wheel/abutils
2023-12-13T22:06:19,127   copying build/lib/abutils/__init__.py -> build/bdist.linux-armv7l/wheel/abutils
2023-12-13T22:06:19,129   copying build/lib/abutils/pl.py -> build/bdist.linux-armv7l/wheel/abutils
2023-12-13T22:06:19,131   running install_egg_info
2023-12-13T22:06:19,162   Copying abutils.egg-info to build/bdist.linux-armv7l/wheel/abutils-0.4.5-py3.11.egg-info
2023-12-13T22:06:19,174   running install_scripts
2023-12-13T22:06:19,192   creating build/bdist.linux-armv7l/wheel/abutils-0.4.5.dist-info/WHEEL
2023-12-13T22:06:19,194   creating '/tmp/pip-wheel-ib6gbi9q/abutils-0.4.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-12-13T22:06:19,196   adding 'abutils/__init__.py'
2023-12-13T22:06:19,198   adding 'abutils/cl.py'
2023-12-13T22:06:19,199   adding 'abutils/io.py'
2023-12-13T22:06:19,201   adding 'abutils/pl.py'
2023-12-13T22:06:19,202   adding 'abutils/tl.py'
2023-12-13T22:06:19,203   adding 'abutils/version.py'
2023-12-13T22:06:19,232   adding 'abutils/bin/cdhit_darwin_amd64'
2023-12-13T22:06:19,259   adding 'abutils/bin/cdhit_darwin_arm64'
2023-12-13T22:06:19,283   adding 'abutils/bin/cdhit_linux_amd64'
2023-12-13T22:06:19,326   adding 'abutils/bin/fasttree_darwin_amd64'
2023-12-13T22:06:19,386   adding 'abutils/bin/fasttree_darwin_arm64'
2023-12-13T22:06:19,457   adding 'abutils/bin/fasttree_linux_amd64'
2023-12-13T22:06:19,468   adding 'abutils/bin/mafft_darwin'
2023-12-13T22:06:19,477   adding 'abutils/bin/mafft_linux'
2023-12-13T22:06:20,664   adding 'abutils/bin/mmseqs_darwin_amd64'
2023-12-13T22:06:30,133   adding 'abutils/bin/mmseqs_darwin_arm64'
2023-12-13T22:06:37,374   adding 'abutils/bin/mmseqs_linux_amd64'
2023-12-13T22:06:37,729   adding 'abutils/bin/muscle3_darwin'
2023-12-13T22:06:37,793   adding 'abutils/bin/muscle3_linux'
2023-12-13T22:06:37,971   adding 'abutils/bin/muscle_darwin_amd64'
2023-12-13T22:06:38,126   adding 'abutils/bin/muscle_darwin_arm64'
2023-12-13T22:06:38,640   adding 'abutils/bin/muscle_linux_amd64'
2023-12-13T22:06:38,732   adding 'abutils/bin/vsearch_darwin_amd64'
2023-12-13T22:06:38,799   adding 'abutils/bin/vsearch_darwin_arm64'
2023-12-13T22:06:39,113   adding 'abutils/bin/vsearch_linux_amd64'
2023-12-13T22:06:39,127   adding 'abutils/bin/mafft_darwin_amd64/in'
2023-12-13T22:06:39,128   adding 'abutils/bin/mafft_darwin_amd64/mafft.bat'
2023-12-13T22:06:39,140   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/bin/mafft'
2023-12-13T22:06:39,453   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/addsingle'
2023-12-13T22:06:39,615   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/contrafoldwrap'
2023-12-13T22:06:39,665   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/countlen'
2023-12-13T22:06:41,970   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dash_client'
2023-12-13T22:06:42,371   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/disttbfast'
2023-12-13T22:06:42,539   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dndblast'
2023-12-13T22:06:42,703   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dndfast7'
2023-12-13T22:06:42,859   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dndpre'
2023-12-13T22:06:43,184   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/dvtditr'
2023-12-13T22:06:43,263   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/f2cl'
2023-12-13T22:06:43,397   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/filter'
2023-12-13T22:06:43,686   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/getlag'
2023-12-13T22:06:43,701   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/hex2maffttext'
2023-12-13T22:06:43,860   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft-distance'
2023-12-13T22:06:43,867   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft-homologs.1'
2023-12-13T22:06:44,151   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft-profile'
2023-12-13T22:06:44,163   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafft.1'
2023-12-13T22:06:44,165   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mafftash_premafft.pl'
2023-12-13T22:06:44,171   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/maffttext2hex'
2023-12-13T22:06:44,470   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/makedirectionlist'
2023-12-13T22:06:44,633   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/mccaskillwrap'
2023-12-13T22:06:44,804   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/multi2hat3s'
2023-12-13T22:06:45,125   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/nodepair'
2023-12-13T22:06:45,449   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/pairash'
2023-12-13T22:06:45,800   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/pairlocalalign'
2023-12-13T22:06:45,939   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/regtable2seq'
2023-12-13T22:06:46,073   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/replaceu'
2023-12-13T22:06:46,209   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/restoreu'
2023-12-13T22:06:46,365   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/score'
2023-12-13T22:06:46,373   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/seekquencer_premafft.pl'
2023-12-13T22:06:46,417   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/seq2regtable'
2023-12-13T22:06:46,703   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/setcore'
2023-12-13T22:06:46,842   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/setdirection'
2023-12-13T22:06:47,008   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/sextet5'
2023-12-13T22:06:47,310   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/splittbfast'
2023-12-13T22:06:47,656   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/tbfast'
2023-12-13T22:06:47,673   adding 'abutils/bin/mafft_darwin_amd64/mafftdir/libexec/version'
2023-12-13T22:06:47,676   adding 'abutils/bin/mafft_darwin_arm64/in'
2023-12-13T22:06:47,677   adding 'abutils/bin/mafft_darwin_arm64/mafft.bat'
2023-12-13T22:06:47,688   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/bin/mafft'
2023-12-13T22:06:48,001   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/addsingle'
2023-12-13T22:06:48,165   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/contrafoldwrap'
2023-12-13T22:06:48,215   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/countlen'
2023-12-13T22:06:51,034   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dash_client'
2023-12-13T22:06:51,433   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/disttbfast'
2023-12-13T22:06:51,602   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dndblast'
2023-12-13T22:06:51,768   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dndfast7'
2023-12-13T22:06:51,925   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dndpre'
2023-12-13T22:06:52,249   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/dvtditr'
2023-12-13T22:06:52,326   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/f2cl'
2023-12-13T22:06:52,458   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/filter'
2023-12-13T22:06:52,747   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/getlag'
2023-12-13T22:06:52,763   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/hex2maffttext'
2023-12-13T22:06:52,924   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft-distance'
2023-12-13T22:06:52,931   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft-homologs.1'
2023-12-13T22:06:53,215   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft-profile'
2023-12-13T22:06:53,227   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafft.1'
2023-12-13T22:06:53,229   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mafftash_premafft.pl'
2023-12-13T22:06:53,235   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/maffttext2hex'
2023-12-13T22:06:53,532   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/makedirectionlist'
2023-12-13T22:06:53,693   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/mccaskillwrap'
2023-12-13T22:06:53,863   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/multi2hat3s'
2023-12-13T22:06:54,186   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/nodepair'
2023-12-13T22:06:54,506   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/pairash'
2023-12-13T22:06:54,816   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/pairlocalalign'
2023-12-13T22:06:54,955   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/regtable2seq'
2023-12-13T22:06:55,088   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/replaceu'
2023-12-13T22:06:55,222   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/restoreu'
2023-12-13T22:06:55,381   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/score'
2023-12-13T22:06:55,389   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/seekquencer_premafft.pl'
2023-12-13T22:06:55,433   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/seq2regtable'
2023-12-13T22:06:55,718   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/setcore'
2023-12-13T22:06:55,855   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/setdirection'
2023-12-13T22:06:56,019   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/sextet5'
2023-12-13T22:06:56,319   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/splittbfast'
2023-12-13T22:06:56,664   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/tbfast'
2023-12-13T22:06:56,680   adding 'abutils/bin/mafft_darwin_arm64/mafftdir/libexec/version'
2023-12-13T22:06:56,683   adding 'abutils/bin/mafft_linux_amd64/mafft.bat'
2023-12-13T22:06:56,695   adding 'abutils/bin/mafft_linux_amd64/mafftdir/bin/mafft'
2023-12-13T22:06:56,948   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/addsingle'
2023-12-13T22:06:57,331   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/contrafoldwrap'
2023-12-13T22:06:57,781   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/countlen'
2023-12-13T22:06:57,789   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/dash_alignments'
2023-12-13T22:06:58,561   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/dash_client'
2023-12-13T22:06:58,589   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/dash_sequences.fa'
2023-12-13T22:06:58,851   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/disttbfast'
2023-12-13T22:06:59,028   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/dndblast'
2023-12-13T22:06:59,206   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/dndfast7'
2023-12-13T22:06:59,383   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/dndpre'
2023-12-13T22:06:59,631   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/dvtditr'
2023-12-13T22:06:59,771   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/f2cl'
2023-12-13T22:06:59,937   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/filter'
2023-12-13T22:07:00,174   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/getlag'
2023-12-13T22:07:00,183   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/hat3'
2023-12-13T22:07:00,292   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/hex2maffttext'
2023-12-13T22:07:00,468   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft-distance'
2023-12-13T22:07:00,476   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft-homologs.1'
2023-12-13T22:07:00,704   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft-profile'
2023-12-13T22:07:00,714   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafft.1'
2023-12-13T22:07:00,716   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/mafftash_premafft.pl'
2023-12-13T22:07:00,818   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/maffttext2hex'
2023-12-13T22:07:01,054   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/makedirectionlist'
2023-12-13T22:07:01,234   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/mccaskillwrap'
2023-12-13T22:07:01,423   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/multi2hat3s'
2023-12-13T22:07:01,669   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/nodepair'
2023-12-13T22:07:01,909   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/pairash'
2023-12-13T22:07:02,153   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/pairlocalalign'
2023-12-13T22:07:02,323   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/regtable2seq'
2023-12-13T22:07:02,492   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/replaceu'
2023-12-13T22:07:02,660   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/restoreu'
2023-12-13T22:07:02,836   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/score'
2023-12-13T22:07:02,845   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/seekquencer_premafft.pl'
2023-12-13T22:07:02,970   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/seq2regtable'
2023-12-13T22:07:03,203   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/setcore'
2023-12-13T22:07:03,372   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/setdirection'
2023-12-13T22:07:03,549   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/sextet5'
2023-12-13T22:07:03,789   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/splittbfast'
2023-12-13T22:07:04,047   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/tbfast'
2023-12-13T22:07:04,157   adding 'abutils/bin/mafft_linux_amd64/mafftdir/libexec/version'
2023-12-13T22:07:04,162   adding 'abutils/core/__init__.py'
2023-12-13T22:07:04,167   adding 'abutils/core/lineage.py'
2023-12-13T22:07:04,170   adding 'abutils/core/pair.py'
2023-12-13T22:07:04,174   adding 'abutils/core/sequence.py'
2023-12-13T22:07:04,176   adding 'abutils/plots/__init__.py'
2023-12-13T22:07:04,178   adding 'abutils/plots/bar.py'
2023-12-13T22:07:04,180   adding 'abutils/plots/base.py'
2023-12-13T22:07:04,182   adding 'abutils/plots/data.py'
2023-12-13T22:07:04,185   adding 'abutils/plots/donut.py'
2023-12-13T22:07:04,188   adding 'abutils/plots/heatmap.py'
2023-12-13T22:07:04,194   adding 'abutils/plots/kde.py'
2023-12-13T22:07:04,197   adding 'abutils/plots/lineage.py'
2023-12-13T22:07:04,199   adding 'abutils/plots/ridge.py'
2023-12-13T22:07:04,201   adding 'abutils/plots/ring.py'
2023-12-13T22:07:04,204   adding 'abutils/plots/scatter.py'
2023-12-13T22:07:04,206   adding 'abutils/plots/summary.py'
2023-12-13T22:07:04,208   adding 'abutils/plots/utils.py'
2023-12-13T22:07:04,210   adding 'abutils/plots/mixins/__init__.py'
2023-12-13T22:07:04,211   adding 'abutils/plots/mixins/hue.py'
2023-12-13T22:07:04,213   adding 'abutils/plots/models/__init__.py'
2023-12-13T22:07:04,216   adding 'abutils/plots/models/data.py'
2023-12-13T22:07:04,218   adding 'abutils/tests/__init__.py'
2023-12-13T22:07:04,220   adding 'abutils/tests/test_alignment.py'
2023-12-13T22:07:04,222   adding 'abutils/tests/test_clonify.py'
2023-12-13T22:07:04,224   adding 'abutils/tests/test_cluster.py'
2023-12-13T22:07:04,225   adding 'abutils/tests/test_color.py'
2023-12-13T22:07:04,227   adding 'abutils/tests/test_pair.py'
2023-12-13T22:07:04,229   adding 'abutils/tests/test_phylo.py'
2023-12-13T22:07:04,231   adding 'abutils/tests/test_sequence.py'
2023-12-13T22:07:04,233   adding 'abutils/tests/test_utilities.py'
2023-12-13T22:07:04,235   adding 'abutils/tools/__init__.py'
2023-12-13T22:07:04,239   adding 'abutils/tools/alignment.py'
2023-12-13T22:07:04,242   adding 'abutils/tools/clonify.py'
2023-12-13T22:07:04,246   adding 'abutils/tools/cluster.py'
2023-12-13T22:07:04,250   adding 'abutils/tools/phylo.py'
2023-12-13T22:07:04,253   adding 'abutils/tools/similarity.py'
2023-12-13T22:07:04,256   adding 'abutils/utils/__init__.py'
2023-12-13T22:07:04,263   adding 'abutils/utils/alignment.py'
2023-12-13T22:07:04,265   adding 'abutils/utils/circos.py'
2023-12-13T22:07:04,270   adding 'abutils/utils/cluster.py'
2023-12-13T22:07:04,271   adding 'abutils/utils/codons.py'
2023-12-13T22:07:04,274   adding 'abutils/utils/color.py'
2023-12-13T22:07:04,275   adding 'abutils/utils/convert.py'
2023-12-13T22:07:04,277   adding 'abutils/utils/database.py'
2023-12-13T22:07:04,279   adding 'abutils/utils/decorators.py'
2023-12-13T22:07:04,281   adding 'abutils/utils/germlines.py'
2023-12-13T22:07:04,283   adding 'abutils/utils/jobs.py'
2023-12-13T22:07:04,285   adding 'abutils/utils/log.py'
2023-12-13T22:07:04,288   adding 'abutils/utils/mongodb.py'
2023-12-13T22:07:04,292   adding 'abutils/utils/phylogeny.py'
2023-12-13T22:07:04,294   adding 'abutils/utils/pipeline.py'
2023-12-13T22:07:04,296   adding 'abutils/utils/progbar.py'
2023-12-13T22:07:04,298   adding 'abutils/utils/s3.py'
2023-12-13T22:07:04,300   adding 'abutils/utils/seqio.py'
2023-12-13T22:07:04,302   adding 'abutils/utils/ssh_tunnel.py'
2023-12-13T22:07:04,304   adding 'abutils/utils/utilities.py'
2023-12-13T22:07:04,306   adding 'abutils/utils/matrices/blosum62'
2023-12-13T22:07:04,307   adding 'abutils/utils/matrices/match1mismatch0'
2023-12-13T22:07:04,308   adding 'abutils/utils/matrices/match3mismatch2'
2023-12-13T22:07:04,311   adding 'abutils-0.4.5.dist-info/LICENSE'
2023-12-13T22:07:04,312   adding 'abutils-0.4.5.dist-info/METADATA'
2023-12-13T22:07:04,313   adding 'abutils-0.4.5.dist-info/WHEEL'
2023-12-13T22:07:04,314   adding 'abutils-0.4.5.dist-info/top_level.txt'
2023-12-13T22:07:04,317   adding 'abutils-0.4.5.dist-info/RECORD'
2023-12-13T22:07:04,684   removing build/bdist.linux-armv7l/wheel
2023-12-13T22:07:04,935   Building wheel for abutils (setup.py): finished with status 'done'
2023-12-13T22:07:06,946   Created wheel for abutils: filename=abutils-0.4.5-py3-none-any.whl size=94376998 sha256=ff4790a1aac8a099c603fbc67c4d341a154c5f999d75d9b9da4a0e1ebc8ba0b4
2023-12-13T22:07:06,947   Stored in directory: /tmp/pip-ephem-wheel-cache-11owcw9i/wheels/3f/03/54/1548180ce5d85eefc34e96d8ed319fcb1b39b918e56954805c
2023-12-13T22:07:06,991 Successfully built abutils
2023-12-13T22:07:09,186 Removed build tracker: '/tmp/pip-build-tracker-6pzyqgta'