2023-12-14T01:21:02,763 Created temporary directory: /tmp/pip-build-tracker-8elar5d_ 2023-12-14T01:21:02,764 Initialized build tracking at /tmp/pip-build-tracker-8elar5d_ 2023-12-14T01:21:02,764 Created build tracker: /tmp/pip-build-tracker-8elar5d_ 2023-12-14T01:21:02,765 Entered build tracker: /tmp/pip-build-tracker-8elar5d_ 2023-12-14T01:21:02,765 Created temporary directory: /tmp/pip-wheel-uc9s6pjm 2023-12-14T01:21:02,769 Created temporary directory: /tmp/pip-ephem-wheel-cache-im2rw_54 2023-12-14T01:21:02,791 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-14T01:21:02,794 2 location(s) to search for versions of cas-tools: 2023-12-14T01:21:02,794 * https://pypi.org/simple/cas-tools/ 2023-12-14T01:21:02,794 * https://www.piwheels.org/simple/cas-tools/ 2023-12-14T01:21:02,795 Fetching project page and analyzing links: https://pypi.org/simple/cas-tools/ 2023-12-14T01:21:02,796 Getting page https://pypi.org/simple/cas-tools/ 2023-12-14T01:21:02,797 Found index url https://pypi.org/simple/ 2023-12-14T01:21:02,932 Fetched page https://pypi.org/simple/cas-tools/ as application/vnd.pypi.simple.v1+json 2023-12-14T01:21:02,938 Found link https://files.pythonhosted.org/packages/39/25/84ad8f63a94c6504874dc8b8952559a8173e31c44d7085681005874aaaec/cas-tools-0.0.1.dev1.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev1 2023-12-14T01:21:02,939 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/e7/15/c3d6bdb34ca613e297547d37a7d1500eb43dd369b4086bdf2564fb8abce8/cas_tools-0.0.1.dev1-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,939 Found link https://files.pythonhosted.org/packages/8b/08/a7b6ef7b2d95e0c54aecb418b2d9659844b67aa83fdfebe6ea61e276a64d/cas-tools-0.0.1.dev2.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev2 2023-12-14T01:21:02,940 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/08/9b/16ebcd2b8da3b0b0ca1000a97c32d40ded9b724fef4deecc5ff6a6121c26/cas_tools-0.0.1.dev2-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,941 Found link https://files.pythonhosted.org/packages/f2/fd/47959f06131aa2719e7f23e8f7a717b352712324361eb34cd0123eccb913/cas-tools-0.0.1.dev3.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev3 2023-12-14T01:21:02,942 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/38/43/db7f7e682c3100d5228b1cd6bb12ec5d6c1ed4d1413ff9e7af0b9d6c01c1/cas_tools-0.0.1.dev3-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,943 Found link https://files.pythonhosted.org/packages/5b/59/a17368c4058f72bb2058ee66924fed3e3bd76d7d080bde1930e5e9a916f3/cas-tools-0.0.1.dev4.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev4 2023-12-14T01:21:02,944 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/20/02/ebab61043190922d625bc6b41c2404962077e3b2813832ccec36959ae39c/cas_tools-0.0.1.dev4-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,945 Found link https://files.pythonhosted.org/packages/c0/26/eb1701b654d3ca93f9d6ddc1cc7bafde1a2414a3942a27fbd00f88bd837c/cas-tools-0.0.1.dev5.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev5 2023-12-14T01:21:02,946 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/34/e3/66acaf2480221181a8bad0260749bfd4ea7d49d94497834ed076f7f314c4/cas_tools-0.0.1.dev5-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,947 Found link https://files.pythonhosted.org/packages/31/fe/edf3090b4fce3a360bedde089374c1e8e427b26dab7874ac90c8e02b2500/cas-tools-0.0.1.dev6.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev6 2023-12-14T01:21:02,947 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/e6/e8/af79cbbc4e5b1328d467ce4440ab6d41a651808431a66f1b53203e54e63e/cas_tools-0.0.1.dev6-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,948 Found link https://files.pythonhosted.org/packages/5d/c6/45849e4bb4acb7ab50dc597dddee9a85ebc66a0293c618fb53d068b48459/cas-tools-0.0.1.dev7.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev7 2023-12-14T01:21:02,950 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/77/a6/b1664a1fc48c6e04bee19da0fbd2d517fed8603b7adf7e7c3556b51f46bb/cas_tools-0.0.1.dev7-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,950 Found link https://files.pythonhosted.org/packages/b9/5e/39f97fb29d99b0ef2f2ffcffe6cab596041f77151661c1a2ce8808c686da/cas-tools-0.0.1.dev8.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev8 2023-12-14T01:21:02,951 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/fe/5b/e35e24291fc1dc7deb8412af12e8ef38d089aa68cd1559e13671183637d9/cas_tools-0.0.1.dev8-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,952 Found link https://files.pythonhosted.org/packages/28/ec/5317b3525f1d8446524985a0eafd9be6ebd8d7ada90d82fef5a5830a585f/cas-tools-0.0.1.dev9.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev9 2023-12-14T01:21:02,952 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/5f/03/908dbfa19ffc6f6f5ca2af139a014f6c37df11b806ea533b4f60b455483f/cas_tools-0.0.1.dev9-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,953 Found link https://files.pythonhosted.org/packages/bc/7b/8d83e7c4a8092e943f141e7355efee65d1073c627ca29010a1d6b3de3c49/cas-tools-0.0.1.dev10.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev10 2023-12-14T01:21:02,954 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/5c/8f/e3ab1e6bfd12e8923bed3f58deb4f7c9b78cf8bfbefa99ca056a2b2cc629/cas_tools-0.0.1.dev10-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,955 Found link https://files.pythonhosted.org/packages/0f/7f/e5292b1dd5194b69f1c889d61a1b7d4de6626bc028686c2820b8dc2ef9bc/cas-tools-0.0.1.dev11.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev11 2023-12-14T01:21:02,956 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/44/d5/fade1277a18d2b06d23c28aa588ffa830cded8700d3f5df0aeb1dc96df50/cas_tools-0.0.1.dev11-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,956 Found link https://files.pythonhosted.org/packages/9f/bf/165ae60044eba072c68d8b261243f9426db3a1b1350baa015b8ddedd2b86/cas-tools-0.0.1.dev12.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev12 2023-12-14T01:21:02,957 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/0a/a4/16192439bc57c9b465c7cb24662df299d0e9a77f09c72784902afb233662/cas_tools-0.0.1.dev12-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,958 Found link https://files.pythonhosted.org/packages/37/27/4cc8301140c475d6780032593c4deea90ad16d67f782990c9589f25e3519/cas-tools-0.0.1.dev13.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev13 2023-12-14T01:21:02,959 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/b3/dd/0b1250e6647c40800b78e5b8f45e2a84ca3d65ab68ec0d4b453accd79e8f/cas_tools-0.0.1.dev13-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,960 Found link https://files.pythonhosted.org/packages/37/56/8d87b34b0fa0bda9637b14c9c9e276111f70a087daf852bd12a33f7fff89/cas-tools-0.0.1.dev14.tar.gz (from https://pypi.org/simple/cas-tools/), version: 0.0.1.dev14 2023-12-14T01:21:02,961 Skipping link: No binaries permitted for cas-tools: https://files.pythonhosted.org/packages/1c/44/08fb4da0aa85fcfd760ddaac70ca351555e5cdb9c69fb22d7418a6e38426/cas_tools-0.0.1.dev14-py3-none-any.whl (from https://pypi.org/simple/cas-tools/) 2023-12-14T01:21:02,962 Fetching project page and analyzing links: https://www.piwheels.org/simple/cas-tools/ 2023-12-14T01:21:02,963 Getting page https://www.piwheels.org/simple/cas-tools/ 2023-12-14T01:21:02,965 Found index url https://www.piwheels.org/simple/ 2023-12-14T01:21:03,145 Fetched page https://www.piwheels.org/simple/cas-tools/ as text/html 2023-12-14T01:21:03,150 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev12-py3-none-any.whl#sha256=8660a36d5ae41976b5432bb558e135257d612ebc8e96ee454a76c8c3c2df9d67 (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,150 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev11-py3-none-any.whl#sha256=253c8aaaf9e5dfd4dc32c5ed874598cd8ff2b9cd53db343dbd0c0e8131f47d01 (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,151 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev10-py3-none-any.whl#sha256=cc4db5cf1635cbcd278f78a84186e9c09806ec8d464217ed194e9afb2be4ee3c (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,151 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev9-py3-none-any.whl#sha256=d97fac5cb8e95f16397eb584ae82b0a123f953ea6c4b6ff1b27f087f6d2994ab (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,152 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev8-py3-none-any.whl#sha256=a6b2c441ada4352e8fe5b485ab027ee916fd54a1d613bc971749ec6d9e5978de (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,152 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev7-py3-none-any.whl#sha256=1826022909039fd8092dfa0adffda8e6833e680ec85b2938c90f77725fb1feb9 (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,153 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev6-py3-none-any.whl#sha256=bc9d549ee95988005db8b88068e8b4b17d21a1e4ffa5c2045f683c29cfb33f44 (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,153 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev5-py3-none-any.whl#sha256=106deb4084f234e1be8e30df33ac79669672b14a15caefd6069b584efbdefdbf (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,154 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev4-py3-none-any.whl#sha256=884485f1e67d6bcfc0781f3645378fcef01d605eab258622c0291a7d1e81b845 (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,154 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev3-py3-none-any.whl#sha256=abf7a34cd83393262dd0c884c087f0578be24c49c3c6b7f70d97a5370a799502 (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,155 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev2-py3-none-any.whl#sha256=2befe7822c5dcdf4c1c1c1041bea4b8ff79fdba77c1a19dfd2655d8e05ede19f (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,156 Skipping link: No binaries permitted for cas-tools: https://www.piwheels.org/simple/cas-tools/cas_tools-0.0.1.dev1-py3-none-any.whl#sha256=44c420d45db20626cfaa3e67b0fac798db383ceeda7559e02131debe0722a092 (from https://www.piwheels.org/simple/cas-tools/) 2023-12-14T01:21:03,156 Skipping link: not a file: https://www.piwheels.org/simple/cas-tools/ 2023-12-14T01:21:03,157 Skipping link: not a file: https://pypi.org/simple/cas-tools/ 2023-12-14T01:21:03,177 Given no hashes to check 1 links for project 'cas-tools': discarding no candidates 2023-12-14T01:21:03,195 Collecting cas-tools==0.0.1.dev13 2023-12-14T01:21:03,198 Created temporary directory: /tmp/pip-unpack-tqwtynmj 2023-12-14T01:21:03,420 Downloading cas-tools-0.0.1.dev13.tar.gz (19 kB) 2023-12-14T01:21:03,488 Added cas-tools==0.0.1.dev13 from https://files.pythonhosted.org/packages/37/27/4cc8301140c475d6780032593c4deea90ad16d67f782990c9589f25e3519/cas-tools-0.0.1.dev13.tar.gz to build tracker '/tmp/pip-build-tracker-8elar5d_' 2023-12-14T01:21:03,489 Running setup.py (path:/tmp/pip-wheel-uc9s6pjm/cas-tools_01e89bc6e2e54e7d95bbcad1bcdf41b0/setup.py) egg_info for package cas-tools 2023-12-14T01:21:03,490 Created temporary directory: /tmp/pip-pip-egg-info-u1s_rgr5 2023-12-14T01:21:03,491 Preparing metadata (setup.py): started 2023-12-14T01:21:03,492 Running command python setup.py egg_info 2023-12-14T01:21:04,511 running egg_info 2023-12-14T01:21:04,512 creating /tmp/pip-pip-egg-info-u1s_rgr5/cas_tools.egg-info 2023-12-14T01:21:04,540 writing /tmp/pip-pip-egg-info-u1s_rgr5/cas_tools.egg-info/PKG-INFO 2023-12-14T01:21:04,544 writing dependency_links to /tmp/pip-pip-egg-info-u1s_rgr5/cas_tools.egg-info/dependency_links.txt 2023-12-14T01:21:04,545 writing entry points to /tmp/pip-pip-egg-info-u1s_rgr5/cas_tools.egg-info/entry_points.txt 2023-12-14T01:21:04,546 writing requirements to /tmp/pip-pip-egg-info-u1s_rgr5/cas_tools.egg-info/requires.txt 2023-12-14T01:21:04,547 writing top-level names to /tmp/pip-pip-egg-info-u1s_rgr5/cas_tools.egg-info/top_level.txt 2023-12-14T01:21:04,549 writing manifest file '/tmp/pip-pip-egg-info-u1s_rgr5/cas_tools.egg-info/SOURCES.txt' 2023-12-14T01:21:04,629 reading manifest file '/tmp/pip-pip-egg-info-u1s_rgr5/cas_tools.egg-info/SOURCES.txt' 2023-12-14T01:21:04,631 reading manifest template 'MANIFEST.in' 2023-12-14T01:21:04,634 writing manifest file '/tmp/pip-pip-egg-info-u1s_rgr5/cas_tools.egg-info/SOURCES.txt' 2023-12-14T01:21:04,740 Preparing metadata (setup.py): finished with status 'done' 2023-12-14T01:21:04,745 Source in /tmp/pip-wheel-uc9s6pjm/cas-tools_01e89bc6e2e54e7d95bbcad1bcdf41b0 has version 0.0.1.dev13, which satisfies requirement cas-tools==0.0.1.dev13 from https://files.pythonhosted.org/packages/37/27/4cc8301140c475d6780032593c4deea90ad16d67f782990c9589f25e3519/cas-tools-0.0.1.dev13.tar.gz 2023-12-14T01:21:04,745 Removed cas-tools==0.0.1.dev13 from https://files.pythonhosted.org/packages/37/27/4cc8301140c475d6780032593c4deea90ad16d67f782990c9589f25e3519/cas-tools-0.0.1.dev13.tar.gz from build tracker '/tmp/pip-build-tracker-8elar5d_' 2023-12-14T01:21:04,750 Created temporary directory: /tmp/pip-unpack-68xdf3ok 2023-12-14T01:21:04,751 Created temporary directory: /tmp/pip-unpack-pn3nvx8q 2023-12-14T01:21:04,759 Building wheels for collected packages: cas-tools 2023-12-14T01:21:04,763 Created temporary directory: /tmp/pip-wheel-h4fnssql 2023-12-14T01:21:04,764 Building wheel for cas-tools (setup.py): started 2023-12-14T01:21:04,765 Destination directory: /tmp/pip-wheel-h4fnssql 2023-12-14T01:21:04,766 Running command python setup.py bdist_wheel 2023-12-14T01:21:05,748 running bdist_wheel 2023-12-14T01:21:05,842 running build 2023-12-14T01:21:05,843 running build_py 2023-12-14T01:21:05,870 creating build 2023-12-14T01:21:05,870 creating build/lib 2023-12-14T01:21:05,871 creating build/lib/cas 2023-12-14T01:21:05,872 copying src/cas/flatten_data_to_anndata.py -> build/lib/cas 2023-12-14T01:21:05,875 copying src/cas/file_utils.py -> build/lib/cas 2023-12-14T01:21:05,877 copying src/cas/__main__.py -> build/lib/cas 2023-12-14T01:21:05,879 copying src/cas/anndata_conversion.py -> build/lib/cas 2023-12-14T01:21:05,882 copying src/cas/flatten_data_to_tables.py -> build/lib/cas 2023-12-14T01:21:05,884 copying src/cas/populate_cell_ids.py -> build/lib/cas 2023-12-14T01:21:05,886 copying src/cas/model.py -> build/lib/cas 2023-12-14T01:21:05,888 copying src/cas/__init__.py -> build/lib/cas 2023-12-14T01:21:05,890 creating build/lib/cas/accession 2023-12-14T01:21:05,891 copying src/cas/accession/incremental_accession_manager.py -> build/lib/cas/accession 2023-12-14T01:21:05,893 copying src/cas/accession/hash_accession_manager.py -> build/lib/cas/accession 2023-12-14T01:21:05,895 copying src/cas/accession/__init__.py -> build/lib/cas/accession 2023-12-14T01:21:05,896 copying src/cas/accession/base_accession_manager.py -> build/lib/cas/accession 2023-12-14T01:21:05,898 creating build/lib/cas/ingest 2023-12-14T01:21:05,899 copying src/cas/ingest/config_validator.py -> build/lib/cas/ingest 2023-12-14T01:21:05,901 copying src/cas/ingest/ingest_user_table.py -> build/lib/cas/ingest 2023-12-14T01:21:05,903 copying src/cas/ingest/__init__.py -> build/lib/cas/ingest 2023-12-14T01:21:05,905 creating build/lib/cas/matrix_file 2023-12-14T01:21:05,906 copying src/cas/matrix_file/base_resolver.py -> build/lib/cas/matrix_file 2023-12-14T01:21:05,907 copying src/cas/matrix_file/cxg_resolver.py -> build/lib/cas/matrix_file 2023-12-14T01:21:05,909 copying src/cas/matrix_file/resolver.py -> build/lib/cas/matrix_file 2023-12-14T01:21:05,910 copying src/cas/matrix_file/__init__.py -> build/lib/cas/matrix_file 2023-12-14T01:21:05,912 running egg_info 2023-12-14T01:21:05,966 writing src/cas_tools.egg-info/PKG-INFO 2023-12-14T01:21:05,969 writing dependency_links to src/cas_tools.egg-info/dependency_links.txt 2023-12-14T01:21:05,971 writing entry points to src/cas_tools.egg-info/entry_points.txt 2023-12-14T01:21:05,973 writing requirements to src/cas_tools.egg-info/requires.txt 2023-12-14T01:21:05,974 writing top-level names to src/cas_tools.egg-info/top_level.txt 2023-12-14T01:21:06,002 reading manifest file 'src/cas_tools.egg-info/SOURCES.txt' 2023-12-14T01:21:06,005 reading manifest template 'MANIFEST.in' 2023-12-14T01:21:06,008 writing manifest file 'src/cas_tools.egg-info/SOURCES.txt' 2023-12-14T01:21:06,011 copying src/cas/ingest/config_schema.yaml -> build/lib/cas/ingest 2023-12-14T01:21:06,039 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-12-14T01:21:06,039 !! 2023-12-14T01:21:06,040 ******************************************************************************** 2023-12-14T01:21:06,041 Please avoid running ``setup.py`` directly. 2023-12-14T01:21:06,042 Instead, use pypa/build, pypa/installer or other 2023-12-14T01:21:06,042 standards-based tools. 2023-12-14T01:21:06,043 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-12-14T01:21:06,044 ******************************************************************************** 2023-12-14T01:21:06,045 !! 2023-12-14T01:21:06,046 self.initialize_options() 2023-12-14T01:21:06,064 installing to build/bdist.linux-armv7l/wheel 2023-12-14T01:21:06,065 running install 2023-12-14T01:21:06,089 running install_lib 2023-12-14T01:21:06,113 creating build/bdist.linux-armv7l 2023-12-14T01:21:06,114 creating build/bdist.linux-armv7l/wheel 2023-12-14T01:21:06,115 creating build/bdist.linux-armv7l/wheel/cas 2023-12-14T01:21:06,116 copying build/lib/cas/flatten_data_to_anndata.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-14T01:21:06,119 copying build/lib/cas/file_utils.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-14T01:21:06,121 copying build/lib/cas/__main__.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-14T01:21:06,123 copying build/lib/cas/anndata_conversion.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-14T01:21:06,126 copying build/lib/cas/flatten_data_to_tables.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-14T01:21:06,128 creating build/bdist.linux-armv7l/wheel/cas/accession 2023-12-14T01:21:06,129 copying build/lib/cas/accession/incremental_accession_manager.py -> build/bdist.linux-armv7l/wheel/cas/accession 2023-12-14T01:21:06,131 copying build/lib/cas/accession/hash_accession_manager.py -> build/bdist.linux-armv7l/wheel/cas/accession 2023-12-14T01:21:06,133 copying build/lib/cas/accession/__init__.py -> build/bdist.linux-armv7l/wheel/cas/accession 2023-12-14T01:21:06,135 copying build/lib/cas/accession/base_accession_manager.py -> build/bdist.linux-armv7l/wheel/cas/accession 2023-12-14T01:21:06,137 creating build/bdist.linux-armv7l/wheel/cas/ingest 2023-12-14T01:21:06,138 copying build/lib/cas/ingest/config_schema.yaml -> build/bdist.linux-armv7l/wheel/cas/ingest 2023-12-14T01:21:06,139 copying build/lib/cas/ingest/config_validator.py -> build/bdist.linux-armv7l/wheel/cas/ingest 2023-12-14T01:21:06,141 copying build/lib/cas/ingest/ingest_user_table.py -> build/bdist.linux-armv7l/wheel/cas/ingest 2023-12-14T01:21:06,143 copying build/lib/cas/ingest/__init__.py -> build/bdist.linux-armv7l/wheel/cas/ingest 2023-12-14T01:21:06,145 copying build/lib/cas/populate_cell_ids.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-14T01:21:06,147 copying build/lib/cas/model.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-14T01:21:06,148 copying build/lib/cas/__init__.py -> build/bdist.linux-armv7l/wheel/cas 2023-12-14T01:21:06,150 creating build/bdist.linux-armv7l/wheel/cas/matrix_file 2023-12-14T01:21:06,151 copying build/lib/cas/matrix_file/base_resolver.py -> build/bdist.linux-armv7l/wheel/cas/matrix_file 2023-12-14T01:21:06,153 copying build/lib/cas/matrix_file/cxg_resolver.py -> build/bdist.linux-armv7l/wheel/cas/matrix_file 2023-12-14T01:21:06,155 copying build/lib/cas/matrix_file/resolver.py -> build/bdist.linux-armv7l/wheel/cas/matrix_file 2023-12-14T01:21:06,156 copying build/lib/cas/matrix_file/__init__.py -> build/bdist.linux-armv7l/wheel/cas/matrix_file 2023-12-14T01:21:06,158 running install_egg_info 2023-12-14T01:21:06,187 Copying src/cas_tools.egg-info to build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev13-py3.11.egg-info 2023-12-14T01:21:06,198 running install_scripts 2023-12-14T01:21:06,211 creating build/bdist.linux-armv7l/wheel/cas_tools-0.0.1.dev13.dist-info/WHEEL 2023-12-14T01:21:06,214 creating '/tmp/pip-wheel-h4fnssql/cas_tools-0.0.1.dev13-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-14T01:21:06,216 adding 'cas/__init__.py' 2023-12-14T01:21:06,217 adding 'cas/__main__.py' 2023-12-14T01:21:06,219 adding 'cas/anndata_conversion.py' 2023-12-14T01:21:06,221 adding 'cas/file_utils.py' 2023-12-14T01:21:06,223 adding 'cas/flatten_data_to_anndata.py' 2023-12-14T01:21:06,225 adding 'cas/flatten_data_to_tables.py' 2023-12-14T01:21:06,227 adding 'cas/model.py' 2023-12-14T01:21:06,228 adding 'cas/populate_cell_ids.py' 2023-12-14T01:21:06,230 adding 'cas/accession/__init__.py' 2023-12-14T01:21:06,231 adding 'cas/accession/base_accession_manager.py' 2023-12-14T01:21:06,232 adding 'cas/accession/hash_accession_manager.py' 2023-12-14T01:21:06,234 adding 'cas/accession/incremental_accession_manager.py' 2023-12-14T01:21:06,236 adding 'cas/ingest/__init__.py' 2023-12-14T01:21:06,237 adding 'cas/ingest/config_schema.yaml' 2023-12-14T01:21:06,238 adding 'cas/ingest/config_validator.py' 2023-12-14T01:21:06,240 adding 'cas/ingest/ingest_user_table.py' 2023-12-14T01:21:06,242 adding 'cas/matrix_file/__init__.py' 2023-12-14T01:21:06,243 adding 'cas/matrix_file/base_resolver.py' 2023-12-14T01:21:06,244 adding 'cas/matrix_file/cxg_resolver.py' 2023-12-14T01:21:06,245 adding 'cas/matrix_file/resolver.py' 2023-12-14T01:21:06,247 adding 'cas_tools-0.0.1.dev13.dist-info/METADATA' 2023-12-14T01:21:06,248 adding 'cas_tools-0.0.1.dev13.dist-info/WHEEL' 2023-12-14T01:21:06,249 adding 'cas_tools-0.0.1.dev13.dist-info/entry_points.txt' 2023-12-14T01:21:06,250 adding 'cas_tools-0.0.1.dev13.dist-info/top_level.txt' 2023-12-14T01:21:06,251 adding 'cas_tools-0.0.1.dev13.dist-info/RECORD' 2023-12-14T01:21:06,253 removing build/bdist.linux-armv7l/wheel 2023-12-14T01:21:06,368 Building wheel for cas-tools (setup.py): finished with status 'done' 2023-12-14T01:21:06,371 Created wheel for cas-tools: filename=cas_tools-0.0.1.dev13-py3-none-any.whl size=24377 sha256=e697eaf479a7f95a0617d50fb7d163d0ab959e46ed2005321b0e27a51615ea2c 2023-12-14T01:21:06,372 Stored in directory: /tmp/pip-ephem-wheel-cache-im2rw_54/wheels/49/06/40/6d12344e88183450cf0115e8c96cf2c745fe47cd74b8007d02 2023-12-14T01:21:06,382 Successfully built cas-tools 2023-12-14T01:21:06,386 Removed build tracker: '/tmp/pip-build-tracker-8elar5d_'