2023-12-14T02:43:10,744 Created temporary directory: /tmp/pip-build-tracker-ogajwjex 2023-12-14T02:43:10,745 Initialized build tracking at /tmp/pip-build-tracker-ogajwjex 2023-12-14T02:43:10,745 Created build tracker: /tmp/pip-build-tracker-ogajwjex 2023-12-14T02:43:10,746 Entered build tracker: /tmp/pip-build-tracker-ogajwjex 2023-12-14T02:43:10,747 Created temporary directory: /tmp/pip-wheel-v9fpsc9c 2023-12-14T02:43:10,750 Created temporary directory: /tmp/pip-ephem-wheel-cache-58036o9j 2023-12-14T02:43:10,772 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-14T02:43:10,775 2 location(s) to search for versions of sniffles2-plot: 2023-12-14T02:43:10,775 * https://pypi.org/simple/sniffles2-plot/ 2023-12-14T02:43:10,775 * https://www.piwheels.org/simple/sniffles2-plot/ 2023-12-14T02:43:10,776 Fetching project page and analyzing links: https://pypi.org/simple/sniffles2-plot/ 2023-12-14T02:43:10,777 Getting page https://pypi.org/simple/sniffles2-plot/ 2023-12-14T02:43:10,778 Found index url https://pypi.org/simple/ 2023-12-14T02:43:11,020 Fetched page https://pypi.org/simple/sniffles2-plot/ as application/vnd.pypi.simple.v1+json 2023-12-14T02:43:11,023 Skipping link: No binaries permitted for sniffles2-plot: https://files.pythonhosted.org/packages/d9/5d/0160a5c898b2c850cf51f59d98375d54bc2949060c1ccf0ea42c35a84a1a/sniffles2_plot-0.1.0-py3-none-any.whl (from https://pypi.org/simple/sniffles2-plot/) (requires-python:>=3.8) 2023-12-14T02:43:11,024 Found link https://files.pythonhosted.org/packages/a9/ee/91559f1a98379d16d0bb7098089040e52bf2d56940c608ca96980e84620c/sniffles2_plot-0.1.0.tar.gz (from https://pypi.org/simple/sniffles2-plot/) (requires-python:>=3.8), version: 0.1.0 2023-12-14T02:43:11,024 Skipping link: No binaries permitted for sniffles2-plot: https://files.pythonhosted.org/packages/bb/bb/01f7b60f67ea5a56372fcb06cfb462a4befc36ddb076c243bd917ee43598/sniffles2_plot-0.1.1-py3-none-any.whl (from https://pypi.org/simple/sniffles2-plot/) (requires-python:>=3.8) 2023-12-14T02:43:11,025 Found link https://files.pythonhosted.org/packages/7f/c2/5160fed1dcb23124e52fbac0f42a5d001ed498a930d526477cac4e42e64e/sniffles2_plot-0.1.1.tar.gz (from https://pypi.org/simple/sniffles2-plot/) (requires-python:>=3.8), version: 0.1.1 2023-12-14T02:43:11,026 Skipping link: No binaries permitted for sniffles2-plot: https://files.pythonhosted.org/packages/49/a0/ecfa254b9e4bfec9753b66f1044159f5fa08720143284ce498f4535ea5e4/sniffles2_plot-0.1.2-py3-none-any.whl (from https://pypi.org/simple/sniffles2-plot/) (requires-python:>=3.8) 2023-12-14T02:43:11,027 Found link https://files.pythonhosted.org/packages/d7/49/5e806d20319b922305201ad49da882cc4557e0fd56c0c50c5a842d966945/sniffles2_plot-0.1.2.tar.gz (from https://pypi.org/simple/sniffles2-plot/) (requires-python:>=3.8), version: 0.1.2 2023-12-14T02:43:11,028 Fetching project page and analyzing links: https://www.piwheels.org/simple/sniffles2-plot/ 2023-12-14T02:43:11,029 Getting page https://www.piwheels.org/simple/sniffles2-plot/ 2023-12-14T02:43:11,030 Found index url https://www.piwheels.org/simple/ 2023-12-14T02:43:11,193 Fetched page https://www.piwheels.org/simple/sniffles2-plot/ as text/html 2023-12-14T02:43:11,195 Skipping link: No binaries permitted for sniffles2-plot: https://www.piwheels.org/simple/sniffles2-plot/sniffles2_plot-0.1.1-py3-none-any.whl#sha256=a706f447683efbad321401138c3a5bd011a02217c7eb1ff3d1fa21d46e4d6d91 (from https://www.piwheels.org/simple/sniffles2-plot/) (requires-python:>=3.8) 2023-12-14T02:43:11,196 Skipping link: No binaries permitted for sniffles2-plot: https://www.piwheels.org/simple/sniffles2-plot/sniffles2_plot-0.1.0-py3-none-any.whl#sha256=dbeb63c6d8bedfdb3f51c9a8dc907f33ef69c1cb1753c988ca1cfbdcfb2d447f (from https://www.piwheels.org/simple/sniffles2-plot/) (requires-python:>=3.8) 2023-12-14T02:43:11,197 Skipping link: not a file: https://www.piwheels.org/simple/sniffles2-plot/ 2023-12-14T02:43:11,197 Skipping link: not a file: https://pypi.org/simple/sniffles2-plot/ 2023-12-14T02:43:11,216 Given no hashes to check 1 links for project 'sniffles2-plot': discarding no candidates 2023-12-14T02:43:11,234 Collecting sniffles2-plot==0.1.2 2023-12-14T02:43:11,237 Created temporary directory: /tmp/pip-unpack-fe30xwr5 2023-12-14T02:43:11,448 Downloading sniffles2_plot-0.1.2.tar.gz (13 kB) 2023-12-14T02:43:11,506 Added sniffles2-plot==0.1.2 from https://files.pythonhosted.org/packages/d7/49/5e806d20319b922305201ad49da882cc4557e0fd56c0c50c5a842d966945/sniffles2_plot-0.1.2.tar.gz to build tracker '/tmp/pip-build-tracker-ogajwjex' 2023-12-14T02:43:11,511 Created temporary directory: /tmp/pip-build-env-ko4kkjac 2023-12-14T02:43:11,515 Installing build dependencies: started 2023-12-14T02:43:11,516 Running command pip subprocess to install build dependencies 2023-12-14T02:43:12,675 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-12-14T02:43:13,164 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-14T02:43:14,563 Collecting setuptools>=61.0.0 2023-12-14T02:43:14,576 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.2-py3-none-any.whl (819 kB) 2023-12-14T02:43:14,796 Collecting wheel 2023-12-14T02:43:14,808 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2023-12-14T02:43:17,621 Installing collected packages: wheel, setuptools 2023-12-14T02:43:17,850 Creating /tmp/pip-build-env-ko4kkjac/overlay/local/bin 2023-12-14T02:43:17,852 changing mode of /tmp/pip-build-env-ko4kkjac/overlay/local/bin/wheel to 755 2023-12-14T02:43:20,103 Successfully installed setuptools-69.0.2 wheel-0.42.0 2023-12-14T02:43:20,647 Installing build dependencies: finished with status 'done' 2023-12-14T02:43:20,650 Getting requirements to build wheel: started 2023-12-14T02:43:20,652 Running command Getting requirements to build wheel 2023-12-14T02:43:21,998 running egg_info 2023-12-14T02:43:22,003 writing src/sniffles2_plot.egg-info/PKG-INFO 2023-12-14T02:43:22,006 writing dependency_links to src/sniffles2_plot.egg-info/dependency_links.txt 2023-12-14T02:43:22,009 writing entry points to src/sniffles2_plot.egg-info/entry_points.txt 2023-12-14T02:43:22,011 writing requirements to src/sniffles2_plot.egg-info/requires.txt 2023-12-14T02:43:22,012 writing top-level names to src/sniffles2_plot.egg-info/top_level.txt 2023-12-14T02:43:22,032 reading manifest file 'src/sniffles2_plot.egg-info/SOURCES.txt' 2023-12-14T02:43:22,037 writing manifest file 'src/sniffles2_plot.egg-info/SOURCES.txt' 2023-12-14T02:43:22,156 Getting requirements to build wheel: finished with status 'done' 2023-12-14T02:43:22,168 Created temporary directory: /tmp/pip-modern-metadata-63sq8j4z 2023-12-14T02:43:22,207 Preparing metadata (pyproject.toml): started 2023-12-14T02:43:22,208 Running command Preparing metadata (pyproject.toml) 2023-12-14T02:43:23,000 running dist_info 2023-12-14T02:43:23,005 creating /tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot.egg-info 2023-12-14T02:43:23,009 writing /tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot.egg-info/PKG-INFO 2023-12-14T02:43:23,012 writing dependency_links to /tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot.egg-info/dependency_links.txt 2023-12-14T02:43:23,014 writing entry points to /tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot.egg-info/entry_points.txt 2023-12-14T02:43:23,016 writing requirements to /tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot.egg-info/requires.txt 2023-12-14T02:43:23,017 writing top-level names to /tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot.egg-info/top_level.txt 2023-12-14T02:43:23,019 writing manifest file '/tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot.egg-info/SOURCES.txt' 2023-12-14T02:43:23,034 reading manifest file '/tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot.egg-info/SOURCES.txt' 2023-12-14T02:43:23,038 writing manifest file '/tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot.egg-info/SOURCES.txt' 2023-12-14T02:43:23,039 creating '/tmp/pip-modern-metadata-63sq8j4z/sniffles2_plot-0.1.2.dist-info' 2023-12-14T02:43:23,187 Preparing metadata (pyproject.toml): finished with status 'done' 2023-12-14T02:43:23,192 Source in /tmp/pip-wheel-v9fpsc9c/sniffles2-plot_070cea6588404c46beaaad75672d592d has version 0.1.2, which satisfies requirement sniffles2-plot==0.1.2 from https://files.pythonhosted.org/packages/d7/49/5e806d20319b922305201ad49da882cc4557e0fd56c0c50c5a842d966945/sniffles2_plot-0.1.2.tar.gz 2023-12-14T02:43:23,193 Removed sniffles2-plot==0.1.2 from https://files.pythonhosted.org/packages/d7/49/5e806d20319b922305201ad49da882cc4557e0fd56c0c50c5a842d966945/sniffles2_plot-0.1.2.tar.gz from build tracker '/tmp/pip-build-tracker-ogajwjex' 2023-12-14T02:43:23,197 Created temporary directory: /tmp/pip-unpack-7ta027ga 2023-12-14T02:43:23,198 Created temporary directory: /tmp/pip-unpack-mnioarc8 2023-12-14T02:43:23,206 Building wheels for collected packages: sniffles2-plot 2023-12-14T02:43:23,210 Created temporary directory: /tmp/pip-wheel-10wqledd 2023-12-14T02:43:23,211 Destination directory: /tmp/pip-wheel-10wqledd 2023-12-14T02:43:23,212 Building wheel for sniffles2-plot (pyproject.toml): started 2023-12-14T02:43:23,214 Running command Building wheel for sniffles2-plot (pyproject.toml) 2023-12-14T02:43:23,961 running bdist_wheel 2023-12-14T02:43:23,978 running build 2023-12-14T02:43:23,978 running build_py 2023-12-14T02:43:23,982 creating build 2023-12-14T02:43:23,983 creating build/lib 2023-12-14T02:43:23,983 creating build/lib/sniffles2_plot 2023-12-14T02:43:23,985 copying src/sniffles2_plot/__main__.py -> build/lib/sniffles2_plot 2023-12-14T02:43:23,987 copying src/sniffles2_plot/schemas.py -> build/lib/sniffles2_plot 2023-12-14T02:43:23,989 copying src/sniffles2_plot/__init__.py -> build/lib/sniffles2_plot 2023-12-14T02:43:23,991 creating build/lib/sniffles2_plot/helper 2023-12-14T02:43:23,992 copying src/sniffles2_plot/helper/io_class.py -> build/lib/sniffles2_plot/helper 2023-12-14T02:43:23,994 copying src/sniffles2_plot/helper/__init__.py -> build/lib/sniffles2_plot/helper 2023-12-14T02:43:23,997 creating build/lib/sniffles2_plot/chart_generator 2023-12-14T02:43:23,998 copying src/sniffles2_plot/chart_generator/__init__.py -> build/lib/sniffles2_plot/chart_generator 2023-12-14T02:43:24,000 copying src/sniffles2_plot/chart_generator/functions_variables_single.py -> build/lib/sniffles2_plot/chart_generator 2023-12-14T02:43:24,002 copying src/sniffles2_plot/chart_generator/sv_sites_per_genome.py -> build/lib/sniffles2_plot/chart_generator 2023-12-14T02:43:24,005 copying src/sniffles2_plot/chart_generator/size_distribution.py -> build/lib/sniffles2_plot/chart_generator 2023-12-14T02:43:24,007 copying src/sniffles2_plot/chart_generator/variant_count.py -> build/lib/sniffles2_plot/chart_generator 2023-12-14T02:43:24,008 copying src/sniffles2_plot/chart_generator/functions_variables_multi.py -> build/lib/sniffles2_plot/chart_generator 2023-12-14T02:43:24,011 creating build/lib/sniffles2_plot/parser 2023-12-14T02:43:24,012 copying src/sniffles2_plot/parser/vcf_line_parser.py -> build/lib/sniffles2_plot/parser 2023-12-14T02:43:24,015 copying src/sniffles2_plot/parser/__init__.py -> build/lib/sniffles2_plot/parser 2023-12-14T02:43:24,017 creating build/lib/sniffles2_plot/cli 2023-12-14T02:43:24,018 copying src/sniffles2_plot/cli/multi_vcf_visualizer.py -> build/lib/sniffles2_plot/cli 2023-12-14T02:43:24,020 copying src/sniffles2_plot/cli/entry_point.py -> build/lib/sniffles2_plot/cli 2023-12-14T02:43:24,022 copying src/sniffles2_plot/cli/arg_parser.py -> build/lib/sniffles2_plot/cli 2023-12-14T02:43:24,023 copying src/sniffles2_plot/cli/single_vcf_visulaizer.py -> build/lib/sniffles2_plot/cli 2023-12-14T02:43:24,025 copying src/sniffles2_plot/cli/__init__.py -> build/lib/sniffles2_plot/cli 2023-12-14T02:43:24,027 copying src/sniffles2_plot/cli/generate_charts.py -> build/lib/sniffles2_plot/cli 2023-12-14T02:43:24,029 running egg_info 2023-12-14T02:43:24,032 writing src/sniffles2_plot.egg-info/PKG-INFO 2023-12-14T02:43:24,035 writing dependency_links to src/sniffles2_plot.egg-info/dependency_links.txt 2023-12-14T02:43:24,036 writing entry points to src/sniffles2_plot.egg-info/entry_points.txt 2023-12-14T02:43:24,038 writing requirements to src/sniffles2_plot.egg-info/requires.txt 2023-12-14T02:43:24,039 writing top-level names to src/sniffles2_plot.egg-info/top_level.txt 2023-12-14T02:43:24,049 reading manifest file 'src/sniffles2_plot.egg-info/SOURCES.txt' 2023-12-14T02:43:24,053 writing manifest file 'src/sniffles2_plot.egg-info/SOURCES.txt' 2023-12-14T02:43:24,065 installing to build/bdist.linux-armv7l/wheel 2023-12-14T02:43:24,065 running install 2023-12-14T02:43:24,089 running install_lib 2023-12-14T02:43:24,093 creating build/bdist.linux-armv7l 2023-12-14T02:43:24,094 creating build/bdist.linux-armv7l/wheel 2023-12-14T02:43:24,095 creating build/bdist.linux-armv7l/wheel/sniffles2_plot 2023-12-14T02:43:24,096 creating build/bdist.linux-armv7l/wheel/sniffles2_plot/helper 2023-12-14T02:43:24,097 copying build/lib/sniffles2_plot/helper/io_class.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/helper 2023-12-14T02:43:24,099 copying build/lib/sniffles2_plot/helper/__init__.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/helper 2023-12-14T02:43:24,101 creating build/bdist.linux-armv7l/wheel/sniffles2_plot/chart_generator 2023-12-14T02:43:24,102 copying build/lib/sniffles2_plot/chart_generator/__init__.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/chart_generator 2023-12-14T02:43:24,104 copying build/lib/sniffles2_plot/chart_generator/functions_variables_single.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/chart_generator 2023-12-14T02:43:24,106 copying build/lib/sniffles2_plot/chart_generator/sv_sites_per_genome.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/chart_generator 2023-12-14T02:43:24,108 copying build/lib/sniffles2_plot/chart_generator/size_distribution.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/chart_generator 2023-12-14T02:43:24,111 copying build/lib/sniffles2_plot/chart_generator/variant_count.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/chart_generator 2023-12-14T02:43:24,112 copying build/lib/sniffles2_plot/chart_generator/functions_variables_multi.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/chart_generator 2023-12-14T02:43:24,115 copying build/lib/sniffles2_plot/__main__.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot 2023-12-14T02:43:24,117 copying build/lib/sniffles2_plot/schemas.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot 2023-12-14T02:43:24,119 creating build/bdist.linux-armv7l/wheel/sniffles2_plot/parser 2023-12-14T02:43:24,120 copying build/lib/sniffles2_plot/parser/vcf_line_parser.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/parser 2023-12-14T02:43:24,123 copying build/lib/sniffles2_plot/parser/__init__.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/parser 2023-12-14T02:43:24,125 copying build/lib/sniffles2_plot/__init__.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot 2023-12-14T02:43:24,127 creating build/bdist.linux-armv7l/wheel/sniffles2_plot/cli 2023-12-14T02:43:24,128 copying build/lib/sniffles2_plot/cli/multi_vcf_visualizer.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/cli 2023-12-14T02:43:24,130 copying build/lib/sniffles2_plot/cli/entry_point.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/cli 2023-12-14T02:43:24,132 copying build/lib/sniffles2_plot/cli/arg_parser.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/cli 2023-12-14T02:43:24,133 copying build/lib/sniffles2_plot/cli/single_vcf_visulaizer.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/cli 2023-12-14T02:43:24,135 copying build/lib/sniffles2_plot/cli/__init__.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/cli 2023-12-14T02:43:24,137 copying build/lib/sniffles2_plot/cli/generate_charts.py -> build/bdist.linux-armv7l/wheel/sniffles2_plot/cli 2023-12-14T02:43:24,139 running install_egg_info 2023-12-14T02:43:24,142 Copying src/sniffles2_plot.egg-info to build/bdist.linux-armv7l/wheel/sniffles2_plot-0.1.2-py3.11.egg-info 2023-12-14T02:43:24,154 running install_scripts 2023-12-14T02:43:24,168 creating build/bdist.linux-armv7l/wheel/sniffles2_plot-0.1.2.dist-info/WHEEL 2023-12-14T02:43:24,170 creating '/tmp/pip-wheel-10wqledd/.tmp-2fjnwhvc/sniffles2_plot-0.1.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-14T02:43:24,172 adding 'sniffles2_plot/__init__.py' 2023-12-14T02:43:24,173 adding 'sniffles2_plot/__main__.py' 2023-12-14T02:43:24,174 adding 'sniffles2_plot/schemas.py' 2023-12-14T02:43:24,176 adding 'sniffles2_plot/chart_generator/__init__.py' 2023-12-14T02:43:24,178 adding 'sniffles2_plot/chart_generator/functions_variables_multi.py' 2023-12-14T02:43:24,180 adding 'sniffles2_plot/chart_generator/functions_variables_single.py' 2023-12-14T02:43:24,181 adding 'sniffles2_plot/chart_generator/size_distribution.py' 2023-12-14T02:43:24,182 adding 'sniffles2_plot/chart_generator/sv_sites_per_genome.py' 2023-12-14T02:43:24,184 adding 'sniffles2_plot/chart_generator/variant_count.py' 2023-12-14T02:43:24,185 adding 'sniffles2_plot/cli/__init__.py' 2023-12-14T02:43:24,187 adding 'sniffles2_plot/cli/arg_parser.py' 2023-12-14T02:43:24,188 adding 'sniffles2_plot/cli/entry_point.py' 2023-12-14T02:43:24,189 adding 'sniffles2_plot/cli/generate_charts.py' 2023-12-14T02:43:24,190 adding 'sniffles2_plot/cli/multi_vcf_visualizer.py' 2023-12-14T02:43:24,192 adding 'sniffles2_plot/cli/single_vcf_visulaizer.py' 2023-12-14T02:43:24,193 adding 'sniffles2_plot/helper/__init__.py' 2023-12-14T02:43:24,195 adding 'sniffles2_plot/helper/io_class.py' 2023-12-14T02:43:24,196 adding 'sniffles2_plot/parser/__init__.py' 2023-12-14T02:43:24,198 adding 'sniffles2_plot/parser/vcf_line_parser.py' 2023-12-14T02:43:24,200 adding 'sniffles2_plot-0.1.2.dist-info/METADATA' 2023-12-14T02:43:24,201 adding 'sniffles2_plot-0.1.2.dist-info/WHEEL' 2023-12-14T02:43:24,202 adding 'sniffles2_plot-0.1.2.dist-info/entry_points.txt' 2023-12-14T02:43:24,203 adding 'sniffles2_plot-0.1.2.dist-info/top_level.txt' 2023-12-14T02:43:24,204 adding 'sniffles2_plot-0.1.2.dist-info/RECORD' 2023-12-14T02:43:24,205 removing build/bdist.linux-armv7l/wheel 2023-12-14T02:43:24,332 Building wheel for sniffles2-plot (pyproject.toml): finished with status 'done' 2023-12-14T02:43:24,337 Created wheel for sniffles2-plot: filename=sniffles2_plot-0.1.2-py3-none-any.whl size=18796 sha256=f90745bbeebe3987df2f1d3b2512cec129c9f260df3c8abdd6e38f082e8adf9b 2023-12-14T02:43:24,338 Stored in directory: /tmp/pip-ephem-wheel-cache-58036o9j/wheels/3f/60/32/15d483baf42beff49c8d9396d15969f33200fecff8a8808954 2023-12-14T02:43:24,348 Successfully built sniffles2-plot 2023-12-14T02:43:24,352 Removed build tracker: '/tmp/pip-build-tracker-ogajwjex'