2023-12-14T02:48:07,841 Created temporary directory: /tmp/pip-build-tracker-sjkfwka5
2023-12-14T02:48:07,843 Initialized build tracking at /tmp/pip-build-tracker-sjkfwka5
2023-12-14T02:48:07,843 Created build tracker: /tmp/pip-build-tracker-sjkfwka5
2023-12-14T02:48:07,844 Entered build tracker: /tmp/pip-build-tracker-sjkfwka5
2023-12-14T02:48:07,845 Created temporary directory: /tmp/pip-wheel-nqa62qi4
2023-12-14T02:48:07,848 Created temporary directory: /tmp/pip-ephem-wheel-cache-_3hc7ist
2023-12-14T02:48:07,870 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-14T02:48:07,873 2 location(s) to search for versions of kage-genotyper:
2023-12-14T02:48:07,873 * https://pypi.org/simple/kage-genotyper/
2023-12-14T02:48:07,873 * https://www.piwheels.org/simple/kage-genotyper/
2023-12-14T02:48:07,874 Fetching project page and analyzing links: https://pypi.org/simple/kage-genotyper/
2023-12-14T02:48:07,875 Getting page https://pypi.org/simple/kage-genotyper/
2023-12-14T02:48:07,876 Found index url https://pypi.org/simple/
2023-12-14T02:48:08,014 Fetched page https://pypi.org/simple/kage-genotyper/ as application/vnd.pypi.simple.v1+json
2023-12-14T02:48:08,023   Found link https://files.pythonhosted.org/packages/e7/66/016860668992a70bab9c872c5032fbc34e2f9ecc6936b95b4e9a0b0c812b/kage-genotyper-0.0.2.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.2
2023-12-14T02:48:08,023   Found link https://files.pythonhosted.org/packages/80/ee/e08c95ccb0c401cfb2049e7271acdcb455196900f035e0700f6229d6c25d/kage-genotyper-0.0.3.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.3
2023-12-14T02:48:08,024   Found link https://files.pythonhosted.org/packages/47/5d/a155072db4e4e73f1a7b0f115f4641172458ef39411234990de2601e453a/kage-genotyper-0.0.4.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.4
2023-12-14T02:48:08,025   Found link https://files.pythonhosted.org/packages/9d/e0/92cb3c9de8704e94d12b1d13eee089389ba0b8cdeb5f7606e82357615039/kage-genotyper-0.0.5.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.5
2023-12-14T02:48:08,026   Found link https://files.pythonhosted.org/packages/98/56/5a01b760b477d84f2e0d4284563b1a49d4c7af720ce16d8fe35273e43659/kage-genotyper-0.0.6.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.6
2023-12-14T02:48:08,026   Found link https://files.pythonhosted.org/packages/62/2f/3fff47b02ebb52b577de8ff09e20d158d6796d577ab450cdee96f698915c/kage-genotyper-0.0.7.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.7
2023-12-14T02:48:08,027   Found link https://files.pythonhosted.org/packages/52/b9/4e0cdf90c6fdee475a81d9eb47e8313937d68047a26314a6f4106b1f2f1d/kage-genotyper-0.0.8.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.8
2023-12-14T02:48:08,028   Found link https://files.pythonhosted.org/packages/37/a0/b87d59cc79cc5ecdd5517141b7c9e29953bfea3e9272b99840e1cd9b3d97/kage-genotyper-0.0.9.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.9
2023-12-14T02:48:08,029   Found link https://files.pythonhosted.org/packages/a3/cc/ba453ad8b8cb30ad50f71f35eb171b5fd2419999465ec9ae2572fc1816bb/kage-genotyper-0.0.10.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.10
2023-12-14T02:48:08,029   Found link https://files.pythonhosted.org/packages/6a/54/8aba286e135663aade36ea3d9a597062aee31798db5622527b438994c2c2/kage-genotyper-0.0.12.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.12
2023-12-14T02:48:08,030   Found link https://files.pythonhosted.org/packages/17/30/f3311d5d12dd04c079c18f0003d3d2d71b5948ee3cd18a74c29890b64a1a/kage-genotyper-0.0.13.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.13
2023-12-14T02:48:08,030   Found link https://files.pythonhosted.org/packages/96/34/4fcd7e0720c9c302ff886c6a92fed693424313842c59864d7c85316dd688/kage-genotyper-0.0.14.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.14
2023-12-14T02:48:08,031   Found link https://files.pythonhosted.org/packages/f3/8b/e0cc70a7601f4c4104eed8edcfba5801143448954baa7aa5e8fdd052eee6/kage-genotyper-0.0.15.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.15
2023-12-14T02:48:08,032   Found link https://files.pythonhosted.org/packages/e6/d1/5686f2e34b84a0800c2f8ad566d16ae77ce5d0f42348ffbf48e62c360fe2/kage-genotyper-0.0.16.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.16
2023-12-14T02:48:08,033   Found link https://files.pythonhosted.org/packages/38/fb/7fc95292837f188450095b39cba3774e469cd086c1fbc646a67168fff033/kage-genotyper-0.0.17.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.17
2023-12-14T02:48:08,033   Found link https://files.pythonhosted.org/packages/11/d9/ac03f00ab30367578bb4b736502f5fe689b0eaa939bcf94d918c265bc66e/kage-genotyper-0.0.18.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.18
2023-12-14T02:48:08,034   Found link https://files.pythonhosted.org/packages/0f/78/d9e9825f272271a0710a2b61012c0d4408db5330306fbe7f9e44655f35c1/kage-genotyper-0.0.19.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.19
2023-12-14T02:48:08,034   Found link https://files.pythonhosted.org/packages/27/1c/1c7840b44249035052e4755c560195f8fc3e3bb9eb0c5c7ef948cfdd7b81/kage-genotyper-0.0.20.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.20
2023-12-14T02:48:08,035   Found link https://files.pythonhosted.org/packages/a0/22/7a0ee3155f5dcb657d1bb2b45d005a5b809ca34b5efae40e2e8fd8a5be4e/kage-genotyper-0.0.21.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.21
2023-12-14T02:48:08,035   Found link https://files.pythonhosted.org/packages/e5/85/7107f0bddffb62199b75a0d83b1f2f147738b6288f9bcae648f682530538/kage-genotyper-0.0.22.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.22
2023-12-14T02:48:08,036   Found link https://files.pythonhosted.org/packages/4c/e6/e5bde91b67bc9c0e2214f2c7d5553a607fa9ab1f3cb7fcae077f7b66806c/kage-genotyper-0.0.23.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.23
2023-12-14T02:48:08,036   Found link https://files.pythonhosted.org/packages/2c/8b/dc4fdf2d083fb0c65d6cc2da49f912cbb7d84511c989a57e53d84396ab96/kage-genotyper-0.0.24.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.24
2023-12-14T02:48:08,037   Found link https://files.pythonhosted.org/packages/bd/82/1a0c533aaef379daaac2135e30b3d88828af5edbe197e92898853b2a4685/kage-genotyper-0.0.25.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.25
2023-12-14T02:48:08,038   Found link https://files.pythonhosted.org/packages/7e/bb/8b366a0178c24ad815438653c9e01602e62052069868f8c49f1c4ad6d8a3/kage-genotyper-0.0.26.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.26
2023-12-14T02:48:08,038   Found link https://files.pythonhosted.org/packages/ef/63/244a1b6a43e4e32b6a570481f97d5d6d609c53eee340d8748d081269355d/kage-genotyper-0.0.27.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.27
2023-12-14T02:48:08,039   Found link https://files.pythonhosted.org/packages/06/fd/b5325cd9790510b27b2ada67c89671cf629d00761ee7bcd2c54c0e7aa3ca/kage-genotyper-0.0.28.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.28
2023-12-14T02:48:08,040   Found link https://files.pythonhosted.org/packages/c4/13/28d486029d280fe02c2f7b2c40376ec7fc481ef1df68745df2948f602616/kage-genotyper-0.0.29.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.29
2023-12-14T02:48:08,041   Found link https://files.pythonhosted.org/packages/34/29/5624612fbd8ecc4fa9fa120a2c98a6b03990db6d0bd8b949450c31a0607a/kage-genotyper-0.0.30.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.0.30
2023-12-14T02:48:08,041   Found link https://files.pythonhosted.org/packages/e2/20/58431b71a41936744a457814111b46939b67bc9f5a8c5aa3286e97eeb370/kage-genotyper-0.1.0.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.0
2023-12-14T02:48:08,042   Found link https://files.pythonhosted.org/packages/60/02/88cd3521d06f167af9773608ac2db840bb7f90943fb8d9463436a2406baa/kage-genotyper-0.1.1.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.1
2023-12-14T02:48:08,042   Found link https://files.pythonhosted.org/packages/9d/11/2de2b62db1ed40a897bf2c8b31399ca3b3c774d5ad8732f69a08a3702261/kage-genotyper-0.1.2.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.2
2023-12-14T02:48:08,043   Found link https://files.pythonhosted.org/packages/a0/05/f5534cac773ba893d3c93012a0150dbf9f8cb535a3b33f1f03957d3dbd69/kage-genotyper-0.1.3.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.3
2023-12-14T02:48:08,044   Found link https://files.pythonhosted.org/packages/82/aa/9aced1ac4cc86f4bee19188f607e13563fb10b00353cf2dd43468ecf53b8/kage-genotyper-0.1.4.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.4
2023-12-14T02:48:08,044   Found link https://files.pythonhosted.org/packages/c7/e3/b7c4d3b74ba8925070ce4a3bf43649f3c2307e16f410784948827d60121a/kage-genotyper-0.1.5.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.5
2023-12-14T02:48:08,045   Found link https://files.pythonhosted.org/packages/03/2a/60bf909f494aa560ab360d944e5a8d50fb3c49e0b8234c66a8707450c700/kage-genotyper-0.1.6.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.6
2023-12-14T02:48:08,046   Found link https://files.pythonhosted.org/packages/92/a7/16ea375bfd0cedabe9ff3e3de05dac0200e29b8e10da32ca14fa2a08618a/kage-genotyper-0.1.7.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.7
2023-12-14T02:48:08,046   Found link https://files.pythonhosted.org/packages/38/17/f0baef7183ba4438de06bc31f1b8f2c0ff2d74d4c4722c3eb03b6775a1db/kage-genotyper-0.1.9.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.9
2023-12-14T02:48:08,047   Found link https://files.pythonhosted.org/packages/ea/65/6603d0188274d337bf016d69e92d70c0346b18cf82aee13e9636fb8a98ea/kage-genotyper-0.1.11.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.11
2023-12-14T02:48:08,047   Found link https://files.pythonhosted.org/packages/83/51/4614c411c210988f58596f9dd2074d917ba9e5434f0da4887dd7c1df7737/kage-genotyper-0.1.12.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.12
2023-12-14T02:48:08,048   Found link https://files.pythonhosted.org/packages/39/09/58efe36d13073b7e4e1d0a34ac7d4e5a30c05c6fb99a2e0723b4c7882285/kage-genotyper-0.1.13.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.13
2023-12-14T02:48:08,048   Found link https://files.pythonhosted.org/packages/77/c4/2bc34acb31ab5175cdb7a195a9fe1f59c7795cc859f869c5d5efd5dad759/kage-genotyper-0.1.14.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.1.14
2023-12-14T02:48:08,049   Found link https://files.pythonhosted.org/packages/77/e5/892007364823bbc1ff487614d77afcd1b738dadf40009ee9a7c4baf3dc41/kage-genotyper-0.2.0.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.2.0
2023-12-14T02:48:08,050   Found link https://files.pythonhosted.org/packages/c0/22/2af38d12dc8622e10ea42e304ba06fe3655398885f043098ff22a0725652/kage-genotyper-0.2.1.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.2.1
2023-12-14T02:48:08,051   Found link https://files.pythonhosted.org/packages/bd/65/426b8d4ed8b16fa400bd19959a26592979c02947830463d8da779476a20c/kage-genotyper-0.2.2.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.2.2
2023-12-14T02:48:08,051   Found link https://files.pythonhosted.org/packages/c3/8f/95df6d19af07be70be24557f51402a59aa7ce7e2e6ffa6fb041070c41582/kage-genotyper-0.2.3.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.2.3
2023-12-14T02:48:08,052   Found link https://files.pythonhosted.org/packages/70/14/3538d6180ab9c9be1eda254b5863c70777e456de977b6225c43910925f15/kage-genotyper-0.2.4.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.2.4
2023-12-14T02:48:08,053   Found link https://files.pythonhosted.org/packages/1c/a5/c6591ac37f3fc7bdf32a74ce53db483b9b15779fa388d2f133eea500915d/kage-genotyper-0.2.5.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.2.5
2023-12-14T02:48:08,053   Found link https://files.pythonhosted.org/packages/ca/46/4ff6a1f5155651e33979d6535c2e33e16e16a503099b235238cdb530ba8b/kage-genotyper-0.2.6.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.2.6
2023-12-14T02:48:08,054   Found link https://files.pythonhosted.org/packages/6c/6d/ad14f41ec3a5c63c35ac4d8b407788a1547d426c3ef80e8867f440cb1d2a/kage-genotyper-0.2.7.tar.gz (from https://pypi.org/simple/kage-genotyper/), version: 0.2.7
2023-12-14T02:48:08,055 Fetching project page and analyzing links: https://www.piwheels.org/simple/kage-genotyper/
2023-12-14T02:48:08,055 Getting page https://www.piwheels.org/simple/kage-genotyper/
2023-12-14T02:48:08,057 Found index url https://www.piwheels.org/simple/
2023-12-14T02:48:08,209 Fetched page https://www.piwheels.org/simple/kage-genotyper/ as text/html
2023-12-14T02:48:08,221   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.2.6-py3-none-any.whl#sha256=40ecf95a0cd3bbfd4aed84c5ec136abdc028509b54dfba312d6f4a12ebcb74ff (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,222   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.2.5-py3-none-any.whl#sha256=f4ad36936c43302464dbf960a90e948e2f98adbb0d47dacb114d8f4867056001 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,222   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.2.4-py3-none-any.whl#sha256=cdb335691524a6f2b06b79a2a3675f9756e7d2e22823b02f6fedcaf4c369ea2f (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,223   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.2.3-py3-none-any.whl#sha256=6964f2b2b0b90ba2e872e5f10f422b0b6f538318362a4307c4688b77d43805d2 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,223   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.2.2-py3-none-any.whl#sha256=88d2948dca9541da3d416e6931026b4f4cf80b78c15c58a58b9ce9ae1665e343 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,224   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.2.1-py3-none-any.whl#sha256=787bcfd15fdadab85ee28dd29967a3f92c4302cb16549911d93f7b95ac14c50d (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,224   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.2.0-py3-none-any.whl#sha256=c6f295d7ee07f206eb458327d59668b39e20994daa63a92c41f5eea2b751c768 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,225   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.14-py3-none-any.whl#sha256=89aa46552e9ebf050aee9b3e46e89416d8f1aea98bd1b612338c3fda037644ac (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,226   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.13-py3-none-any.whl#sha256=9bab52d5e6efcb201a0c5e79e1e7137c1edb5fbe54012b27da2e1ecec3430b40 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,226   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.12-py3-none-any.whl#sha256=cd646570f0e14c8ab99fcc6d060f5fd865d19cf26c182b9496dbd5036ef8474f (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,227   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.11-py3-none-any.whl#sha256=712cbb5cdf0871b3e86a1bfe294160b9dd2f5e975cbeb0b069608b05e61c2e63 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,227   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.9-py3-none-any.whl#sha256=abd4c09ec1c0e4e768343edc00f128ef5051e536f64ea1cf8574bc4189560df4 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,228   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.7-py3-none-any.whl#sha256=8f43fee2c6e410f98da126e538c321be6635f13c4117ae655b5903f85ba61a37 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,229   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.6-py3-none-any.whl#sha256=9a7614ebd0f8fbe1f2ffd60e6026cca8df99304e7df1a63f9a12e083dd8783c9 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,229   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.5-py3-none-any.whl#sha256=863ff32767fc3a5a4edf2d12a875bdb5282e1d7585f5cccadd07e34291bace14 (from https://www.piwheels.org/simple/kage-genotyper/)
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2023-12-14T02:48:08,230   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.3-py3-none-any.whl#sha256=019dc5797ec7e2f674c903aec8ffec4e6144d072983bc357b84210d089c2aa00 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,230   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.2-py3-none-any.whl#sha256=7b7e6244fdda2b946ac39cc1f3f5ec058a048b088badccf4a7b51d8558a836c0 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,231   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.1-py3-none-any.whl#sha256=38c35463a41fb2abfeb920906eeeff7c05abd5b24007b70ab960699884a57030 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,232   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.1.0-py3-none-any.whl#sha256=6982f507c36702a89842b3b169e08b64968e0a45d8cc1f240e9bab2d00fa6e30 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,232   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.30-py3-none-any.whl#sha256=925040198aeaf8ee50b389c1f5b53028e48e9864866f33f19b3c5683d09b88c0 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,233   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.29-py3-none-any.whl#sha256=a3d4f0096efe9011cee430d801727472fc57ae199b0a9c2505c7c1dced2a1f42 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,233   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.28-py3-none-any.whl#sha256=300dac9a2f965c3a5db0db983ff25a0f3f87d77fdf2e4337a39b9d32960ebf35 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,234   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.27-py3-none-any.whl#sha256=158cb4cc23fc99e88fffd12cc33f45706f00ffd4bf61f8e154c6784da6ad3dab (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,235   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.26-py3-none-any.whl#sha256=47ba5f3687b9a97062b67420b47afffa3db43ab055ab75214953f259bf27097a (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,235   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.25-py3-none-any.whl#sha256=2d96189cd413c6434b7493e54e3c958233b879124d1196fd2af50d8b3bb3f801 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,236   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.24-py3-none-any.whl#sha256=b71fc42047e6354a93f096624bba70c64d698923d0c463291ba16a9330719df3 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,236   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.23-py3-none-any.whl#sha256=c18fe0b577c6929804d2c27354474dff0c3ee75b07aa56352a7a58cad13e6faa (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,237   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.22-py3-none-any.whl#sha256=d69afe43c7ad35a7f1a56f2bd46a364119ecc57afc5f66db5cb9441de6bde4be (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,237   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.21-py3-none-any.whl#sha256=986ef6dc08553b37b5f45a3f5d4fab3fe7b7533b66c46d61d0ccd7e1805808e9 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,237   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.20-py3-none-any.whl#sha256=52ce4e67bf082e0c52c1e017279afb7f816d91a56ba7b84f05da7b2f90c5f773 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,238   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.19-py3-none-any.whl#sha256=1e722fb7bd2ba87c1876b357e13c266b42cac5fe7a90181bdf470c0adf294a8b (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,238   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.18-py3-none-any.whl#sha256=e86a7b9cffd0dbcc1521c3de19e5df55b99115a71bb548f2987aca3e271eb3c4 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,239   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.17-py3-none-any.whl#sha256=028c50f35435ecf5cc9340632b04277e33156d88e7b5a7845902e025f88bd9d3 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,239   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.16-py3-none-any.whl#sha256=dab976f34303030cadeacc00def520c328db9330fcd801e2bcbd553b867566c4 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,240   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.15-py3-none-any.whl#sha256=81609a0f4e374c51e06eeb78fe684d382f3004234eba4b9bb5f10677f62f185c (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,241   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.14-py3-none-any.whl#sha256=a08f7b62017bb01e15c21b4752a1c020e022b2d1c97e4f473c1b4e1486c786a1 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,241   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.13-py3-none-any.whl#sha256=a256a7d8c6fbb49d6029a56d01e7608d04434d6016d8851d750b3c0a946fe0d4 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,242   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.12-py3-none-any.whl#sha256=7d3956620409c7b4f5acbfb7ba2f2c5b1ac4fa3761bc803d9500f4e627943de5 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,242   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.10-py3-none-any.whl#sha256=f0de4fec6f21e6c0e0fe926b55af6a9032fb8af3ff0ac0a4e462c49fa9fefaf5 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,243   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.9-py3-none-any.whl#sha256=6728e2c34e7473f450ba0dc3b680189ec324937e583ce456df04d4352047531b (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,244   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.8-py3-none-any.whl#sha256=17c38eb9469806ae1d16028b61450a754b7a2e9607b63cf4cb2c1bc4cd19f562 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,244   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.7-py3-none-any.whl#sha256=6c45550e73562e3543e4dedf63f5e42897169f62a701603f2c4a460ac1e0b5fa (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,244   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.6-py3-none-any.whl#sha256=7f26289022b49cd9611615aa9f542bea798b0827f5df45e23c5d65148fb2f169 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,245   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.5-py3-none-any.whl#sha256=dbca21ae8964d1bf38306442e517c6b17b688a29519f7675082be82135c4c98f (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,245   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.4-py3-none-any.whl#sha256=a279c71d67ea133f1cf0818eb5c559c97e5f2460cc45aba044dd17abf30d6446 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,246   Skipping link: No binaries permitted for kage-genotyper: https://www.piwheels.org/simple/kage-genotyper/kage_genotyper-0.0.3-py3-none-any.whl#sha256=7d52b7bdc251d8fa41b2627126137f9c9d6b34e76dcc9d8c85de8d0d42f6bf33 (from https://www.piwheels.org/simple/kage-genotyper/)
2023-12-14T02:48:08,247 Skipping link: not a file: https://www.piwheels.org/simple/kage-genotyper/
2023-12-14T02:48:08,247 Skipping link: not a file: https://pypi.org/simple/kage-genotyper/
2023-12-14T02:48:08,271 Given no hashes to check 1 links for project 'kage-genotyper': discarding no candidates
2023-12-14T02:48:08,290 Collecting kage-genotyper==0.2.7
2023-12-14T02:48:08,292   Created temporary directory: /tmp/pip-unpack-d1_y7mty
2023-12-14T02:48:08,630   Downloading kage-genotyper-0.2.7.tar.gz (12.8 MB)
2023-12-14T02:48:11,749   Added kage-genotyper==0.2.7 from https://files.pythonhosted.org/packages/6c/6d/ad14f41ec3a5c63c35ac4d8b407788a1547d426c3ef80e8867f440cb1d2a/kage-genotyper-0.2.7.tar.gz to build tracker '/tmp/pip-build-tracker-sjkfwka5'
2023-12-14T02:48:11,751   Running setup.py (path:/tmp/pip-wheel-nqa62qi4/kage-genotyper_54bad76d2cb14bd5be93e00952694fce/setup.py) egg_info for package kage-genotyper
2023-12-14T02:48:11,752   Created temporary directory: /tmp/pip-pip-egg-info-cc_ggijn
2023-12-14T02:48:11,753   Preparing metadata (setup.py): started
2023-12-14T02:48:11,754   Running command python setup.py egg_info
2023-12-14T02:48:12,757   running egg_info
2023-12-14T02:48:12,758   creating /tmp/pip-pip-egg-info-cc_ggijn/kage_genotyper.egg-info
2023-12-14T02:48:12,783   writing /tmp/pip-pip-egg-info-cc_ggijn/kage_genotyper.egg-info/PKG-INFO
2023-12-14T02:48:12,787   writing dependency_links to /tmp/pip-pip-egg-info-cc_ggijn/kage_genotyper.egg-info/dependency_links.txt
2023-12-14T02:48:12,788   writing entry points to /tmp/pip-pip-egg-info-cc_ggijn/kage_genotyper.egg-info/entry_points.txt
2023-12-14T02:48:12,790   writing requirements to /tmp/pip-pip-egg-info-cc_ggijn/kage_genotyper.egg-info/requires.txt
2023-12-14T02:48:12,791   writing top-level names to /tmp/pip-pip-egg-info-cc_ggijn/kage_genotyper.egg-info/top_level.txt
2023-12-14T02:48:12,793   writing manifest file '/tmp/pip-pip-egg-info-cc_ggijn/kage_genotyper.egg-info/SOURCES.txt'
2023-12-14T02:48:12,881   reading manifest file '/tmp/pip-pip-egg-info-cc_ggijn/kage_genotyper.egg-info/SOURCES.txt'
2023-12-14T02:48:12,882   adding license file 'LICENSE'
2023-12-14T02:48:12,886   writing manifest file '/tmp/pip-pip-egg-info-cc_ggijn/kage_genotyper.egg-info/SOURCES.txt'
2023-12-14T02:48:12,993   Preparing metadata (setup.py): finished with status 'done'
2023-12-14T02:48:12,997   Source in /tmp/pip-wheel-nqa62qi4/kage-genotyper_54bad76d2cb14bd5be93e00952694fce has version 0.2.7, which satisfies requirement kage-genotyper==0.2.7 from https://files.pythonhosted.org/packages/6c/6d/ad14f41ec3a5c63c35ac4d8b407788a1547d426c3ef80e8867f440cb1d2a/kage-genotyper-0.2.7.tar.gz
2023-12-14T02:48:12,998   Removed kage-genotyper==0.2.7 from https://files.pythonhosted.org/packages/6c/6d/ad14f41ec3a5c63c35ac4d8b407788a1547d426c3ef80e8867f440cb1d2a/kage-genotyper-0.2.7.tar.gz from build tracker '/tmp/pip-build-tracker-sjkfwka5'
2023-12-14T02:48:13,003 Created temporary directory: /tmp/pip-unpack-4bvq9vko
2023-12-14T02:48:13,003 Created temporary directory: /tmp/pip-unpack-hyqh7c0w
2023-12-14T02:48:13,024 Building wheels for collected packages: kage-genotyper
2023-12-14T02:48:13,028   Created temporary directory: /tmp/pip-wheel-95k6fr0w
2023-12-14T02:48:13,029   Building wheel for kage-genotyper (setup.py): started
2023-12-14T02:48:13,030   Destination directory: /tmp/pip-wheel-95k6fr0w
2023-12-14T02:48:13,030   Running command python setup.py bdist_wheel
2023-12-14T02:48:14,017   running bdist_wheel
2023-12-14T02:48:14,115   running build
2023-12-14T02:48:14,116   running build_py
2023-12-14T02:48:14,143   creating build
2023-12-14T02:48:14,144   creating build/lib
2023-12-14T02:48:14,145   creating build/lib/kage
2023-12-14T02:48:14,147   copying kage/configuration.py -> build/lib/kage
2023-12-14T02:48:14,149   copying kage/io.py -> build/lib/kage
2023-12-14T02:48:14,151   copying kage/variant_filtering.py -> build/lib/kage
2023-12-14T02:48:14,153   copying kage/util.py -> build/lib/kage
2023-12-14T02:48:14,156   copying kage/node_counts.py -> build/lib/kage
2023-12-14T02:48:14,158   copying kage/__init__.py -> build/lib/kage
2023-12-14T02:48:14,159   copying kage/naive_genotyper.py -> build/lib/kage
2023-12-14T02:48:14,161   copying kage/command_line_interface.py -> build/lib/kage
2023-12-14T02:48:14,165   creating build/lib/kage/benchmarking
2023-12-14T02:48:14,166   copying kage/benchmarking/vcf_preprocessing.py -> build/lib/kage/benchmarking
2023-12-14T02:48:14,168   copying kage/benchmarking/__init__.py -> build/lib/kage/benchmarking
2023-12-14T02:48:14,170   creating build/lib/kage/simulation
2023-12-14T02:48:14,172   copying kage/simulation/read_simulation.py -> build/lib/kage/simulation
2023-12-14T02:48:14,174   copying kage/simulation/__init__.py -> build/lib/kage/simulation
2023-12-14T02:48:14,176   copying kage/simulation/simulation.py -> build/lib/kage/simulation
2023-12-14T02:48:14,179   creating build/lib/kage/indexing
2023-12-14T02:48:14,180   copying kage/indexing/path_based_count_model.py -> build/lib/kage/indexing
2023-12-14T02:48:14,183   copying kage/indexing/main.py -> build/lib/kage/indexing
2023-12-14T02:48:14,186   copying kage/indexing/index_bundle.py -> build/lib/kage/indexing
2023-12-14T02:48:14,187   copying kage/indexing/signatures.py -> build/lib/kage/indexing
2023-12-14T02:48:14,191   copying kage/indexing/div.py -> build/lib/kage/indexing
2023-12-14T02:48:14,193   copying kage/indexing/kmer_scoring.py -> build/lib/kage/indexing
2023-12-14T02:48:14,195   copying kage/indexing/modulo_filter.py -> build/lib/kage/indexing
2023-12-14T02:48:14,197   copying kage/indexing/__init__.py -> build/lib/kage/indexing
2023-12-14T02:48:14,199   copying kage/indexing/graph.py -> build/lib/kage/indexing
2023-12-14T02:48:14,201   copying kage/indexing/paths.py -> build/lib/kage/indexing
2023-12-14T02:48:14,204   copying kage/indexing/sparse_haplotype_matrix.py -> build/lib/kage/indexing
2023-12-14T02:48:14,206   copying kage/indexing/path_variant_indexing.py -> build/lib/kage/indexing
2023-12-14T02:48:14,209   copying kage/indexing/tricky_variants.py -> build/lib/kage/indexing
2023-12-14T02:48:14,211   creating build/lib/kage/analysis
2023-12-14T02:48:14,212   copying kage/analysis/analysis.py -> build/lib/kage/analysis
2023-12-14T02:48:14,215   copying kage/analysis/debugging.py -> build/lib/kage/analysis
2023-12-14T02:48:14,218   copying kage/analysis/genotype_accuracy.py -> build/lib/kage/analysis
2023-12-14T02:48:14,220   copying kage/analysis/__init__.py -> build/lib/kage/analysis
2023-12-14T02:48:14,222   copying kage/analysis/variant_kmer_analyser.py -> build/lib/kage/analysis
2023-12-14T02:48:14,225   creating build/lib/kage/models
2023-12-14T02:48:14,226   copying kage/models/sampling_combo_model.py -> build/lib/kage/models
2023-12-14T02:48:14,229   copying kage/models/helper_index_using_duplicate_counts.py -> build/lib/kage/models
2023-12-14T02:48:14,230   copying kage/models/helper_index.py -> build/lib/kage/models
2023-12-14T02:48:14,232   copying kage/models/joint_distribution.py -> build/lib/kage/models
2023-12-14T02:48:14,234   copying kage/models/__init__.py -> build/lib/kage/models
2023-12-14T02:48:14,236   copying kage/models/mapping_model.py -> build/lib/kage/models
2023-12-14T02:48:14,238   copying kage/models/models.py -> build/lib/kage/models
2023-12-14T02:48:14,240   copying kage/models/helper_model.py -> build/lib/kage/models
2023-12-14T02:48:14,243   creating build/lib/kage/preprocessing
2023-12-14T02:48:14,245   copying kage/preprocessing/variants.py -> build/lib/kage/preprocessing
2023-12-14T02:48:14,248   copying kage/preprocessing/__init__.py -> build/lib/kage/preprocessing
2023-12-14T02:48:14,250   creating build/lib/kage/modles
2023-12-14T02:48:14,251   copying kage/modles/__init__.py -> build/lib/kage/modles
2023-12-14T02:48:14,253   creating build/lib/kage/glimpse
2023-12-14T02:48:14,255   copying kage/glimpse/glimpse_wrapper.py -> build/lib/kage/glimpse
2023-12-14T02:48:14,257   copying kage/glimpse/__init__.py -> build/lib/kage/glimpse
2023-12-14T02:48:14,259   creating build/lib/kage/genotyping
2023-12-14T02:48:14,260   copying kage/genotyping/multiallelic.py -> build/lib/kage/genotyping
2023-12-14T02:48:14,262   copying kage/genotyping/combination_model_genotyper.py -> build/lib/kage/genotyping
2023-12-14T02:48:14,265   copying kage/genotyping/__init__.py -> build/lib/kage/genotyping
2023-12-14T02:48:14,298   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-12-14T02:48:14,299   !!

2023-12-14T02:48:14,300           ********************************************************************************
2023-12-14T02:48:14,300           Please avoid running ``setup.py`` directly.
2023-12-14T02:48:14,301           Instead, use pypa/build, pypa/installer or other
2023-12-14T02:48:14,301           standards-based tools.

2023-12-14T02:48:14,302           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-12-14T02:48:14,303           ********************************************************************************

2023-12-14T02:48:14,304   !!
2023-12-14T02:48:14,305     self.initialize_options()
2023-12-14T02:48:14,327   installing to build/bdist.linux-armv7l/wheel
2023-12-14T02:48:14,328   running install
2023-12-14T02:48:14,353   running install_lib
2023-12-14T02:48:14,378   creating build/bdist.linux-armv7l
2023-12-14T02:48:14,379   creating build/bdist.linux-armv7l/wheel
2023-12-14T02:48:14,381   creating build/bdist.linux-armv7l/wheel/kage
2023-12-14T02:48:14,383   copying build/lib/kage/configuration.py -> build/bdist.linux-armv7l/wheel/kage
2023-12-14T02:48:14,386   creating build/bdist.linux-armv7l/wheel/kage/benchmarking
2023-12-14T02:48:14,387   copying build/lib/kage/benchmarking/vcf_preprocessing.py -> build/bdist.linux-armv7l/wheel/kage/benchmarking
2023-12-14T02:48:14,390   copying build/lib/kage/benchmarking/__init__.py -> build/bdist.linux-armv7l/wheel/kage/benchmarking
2023-12-14T02:48:14,392   copying build/lib/kage/io.py -> build/bdist.linux-armv7l/wheel/kage
2023-12-14T02:48:14,395   copying build/lib/kage/variant_filtering.py -> build/bdist.linux-armv7l/wheel/kage
2023-12-14T02:48:14,397   creating build/bdist.linux-armv7l/wheel/kage/simulation
2023-12-14T02:48:14,399   copying build/lib/kage/simulation/read_simulation.py -> build/bdist.linux-armv7l/wheel/kage/simulation
2023-12-14T02:48:14,401   copying build/lib/kage/simulation/__init__.py -> build/bdist.linux-armv7l/wheel/kage/simulation
2023-12-14T02:48:14,403   copying build/lib/kage/simulation/simulation.py -> build/bdist.linux-armv7l/wheel/kage/simulation
2023-12-14T02:48:14,407   creating build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,408   copying build/lib/kage/indexing/path_based_count_model.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,411   copying build/lib/kage/indexing/main.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,414   copying build/lib/kage/indexing/index_bundle.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,416   copying build/lib/kage/indexing/signatures.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,420   copying build/lib/kage/indexing/div.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,422   copying build/lib/kage/indexing/kmer_scoring.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,425   copying build/lib/kage/indexing/modulo_filter.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,427   copying build/lib/kage/indexing/__init__.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,429   copying build/lib/kage/indexing/graph.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,432   copying build/lib/kage/indexing/paths.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,435   copying build/lib/kage/indexing/sparse_haplotype_matrix.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,437   copying build/lib/kage/indexing/path_variant_indexing.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,440   copying build/lib/kage/indexing/tricky_variants.py -> build/bdist.linux-armv7l/wheel/kage/indexing
2023-12-14T02:48:14,443   creating build/bdist.linux-armv7l/wheel/kage/analysis
2023-12-14T02:48:14,445   copying build/lib/kage/analysis/analysis.py -> build/bdist.linux-armv7l/wheel/kage/analysis
2023-12-14T02:48:14,448   copying build/lib/kage/analysis/debugging.py -> build/bdist.linux-armv7l/wheel/kage/analysis
2023-12-14T02:48:14,450   copying build/lib/kage/analysis/genotype_accuracy.py -> build/bdist.linux-armv7l/wheel/kage/analysis
2023-12-14T02:48:14,453   copying build/lib/kage/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/kage/analysis
2023-12-14T02:48:14,455   copying build/lib/kage/analysis/variant_kmer_analyser.py -> build/bdist.linux-armv7l/wheel/kage/analysis
2023-12-14T02:48:14,458   creating build/bdist.linux-armv7l/wheel/kage/models
2023-12-14T02:48:14,459   copying build/lib/kage/models/sampling_combo_model.py -> build/bdist.linux-armv7l/wheel/kage/models
2023-12-14T02:48:14,462   copying build/lib/kage/models/helper_index_using_duplicate_counts.py -> build/bdist.linux-armv7l/wheel/kage/models
2023-12-14T02:48:14,464   copying build/lib/kage/models/helper_index.py -> build/bdist.linux-armv7l/wheel/kage/models
2023-12-14T02:48:14,467   copying build/lib/kage/models/joint_distribution.py -> build/bdist.linux-armv7l/wheel/kage/models
2023-12-14T02:48:14,469   copying build/lib/kage/models/__init__.py -> build/bdist.linux-armv7l/wheel/kage/models
2023-12-14T02:48:14,471   copying build/lib/kage/models/mapping_model.py -> build/bdist.linux-armv7l/wheel/kage/models
2023-12-14T02:48:14,473   copying build/lib/kage/models/models.py -> build/bdist.linux-armv7l/wheel/kage/models
2023-12-14T02:48:14,476   copying build/lib/kage/models/helper_model.py -> build/bdist.linux-armv7l/wheel/kage/models
2023-12-14T02:48:14,479   creating build/bdist.linux-armv7l/wheel/kage/preprocessing
2023-12-14T02:48:14,480   copying build/lib/kage/preprocessing/variants.py -> build/bdist.linux-armv7l/wheel/kage/preprocessing
2023-12-14T02:48:14,483   copying build/lib/kage/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/kage/preprocessing
2023-12-14T02:48:14,486   copying build/lib/kage/util.py -> build/bdist.linux-armv7l/wheel/kage
2023-12-14T02:48:14,488   copying build/lib/kage/node_counts.py -> build/bdist.linux-armv7l/wheel/kage
2023-12-14T02:48:14,490   creating build/bdist.linux-armv7l/wheel/kage/modles
2023-12-14T02:48:14,492   copying build/lib/kage/modles/__init__.py -> build/bdist.linux-armv7l/wheel/kage/modles
2023-12-14T02:48:14,494   creating build/bdist.linux-armv7l/wheel/kage/glimpse
2023-12-14T02:48:14,495   copying build/lib/kage/glimpse/glimpse_wrapper.py -> build/bdist.linux-armv7l/wheel/kage/glimpse
2023-12-14T02:48:14,497   copying build/lib/kage/glimpse/__init__.py -> build/bdist.linux-armv7l/wheel/kage/glimpse
2023-12-14T02:48:14,499   copying build/lib/kage/__init__.py -> build/bdist.linux-armv7l/wheel/kage
2023-12-14T02:48:14,501   creating build/bdist.linux-armv7l/wheel/kage/genotyping
2023-12-14T02:48:14,503   copying build/lib/kage/genotyping/multiallelic.py -> build/bdist.linux-armv7l/wheel/kage/genotyping
2023-12-14T02:48:14,505   copying build/lib/kage/genotyping/combination_model_genotyper.py -> build/bdist.linux-armv7l/wheel/kage/genotyping
2023-12-14T02:48:14,507   copying build/lib/kage/genotyping/__init__.py -> build/bdist.linux-armv7l/wheel/kage/genotyping
2023-12-14T02:48:14,509   copying build/lib/kage/naive_genotyper.py -> build/bdist.linux-armv7l/wheel/kage
2023-12-14T02:48:14,511   copying build/lib/kage/command_line_interface.py -> build/bdist.linux-armv7l/wheel/kage
2023-12-14T02:48:14,514   running install_egg_info
2023-12-14T02:48:14,574   running egg_info
2023-12-14T02:48:14,598   writing kage_genotyper.egg-info/PKG-INFO
2023-12-14T02:48:14,601   writing dependency_links to kage_genotyper.egg-info/dependency_links.txt
2023-12-14T02:48:14,602   writing entry points to kage_genotyper.egg-info/entry_points.txt
2023-12-14T02:48:14,604   writing requirements to kage_genotyper.egg-info/requires.txt
2023-12-14T02:48:14,605   writing top-level names to kage_genotyper.egg-info/top_level.txt
2023-12-14T02:48:14,639   reading manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2023-12-14T02:48:14,644   adding license file 'LICENSE'
2023-12-14T02:48:14,649   writing manifest file 'kage_genotyper.egg-info/SOURCES.txt'
2023-12-14T02:48:14,651   Copying kage_genotyper.egg-info to build/bdist.linux-armv7l/wheel/kage_genotyper-0.2.7-py3.11.egg-info
2023-12-14T02:48:14,663   running install_scripts
2023-12-14T02:48:14,682   creating build/bdist.linux-armv7l/wheel/kage_genotyper-0.2.7.dist-info/WHEEL
2023-12-14T02:48:14,684   creating '/tmp/pip-wheel-95k6fr0w/kage_genotyper-0.2.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-12-14T02:48:14,686   adding 'kage/__init__.py'
2023-12-14T02:48:14,689   adding 'kage/command_line_interface.py'
2023-12-14T02:48:14,691   adding 'kage/configuration.py'
2023-12-14T02:48:14,693   adding 'kage/io.py'
2023-12-14T02:48:14,694   adding 'kage/naive_genotyper.py'
2023-12-14T02:48:14,695   adding 'kage/node_counts.py'
2023-12-14T02:48:14,697   adding 'kage/util.py'
2023-12-14T02:48:14,698   adding 'kage/variant_filtering.py'
2023-12-14T02:48:14,700   adding 'kage/analysis/__init__.py'
2023-12-14T02:48:14,702   adding 'kage/analysis/analysis.py'
2023-12-14T02:48:14,704   adding 'kage/analysis/debugging.py'
2023-12-14T02:48:14,707   adding 'kage/analysis/genotype_accuracy.py'
2023-12-14T02:48:14,708   adding 'kage/analysis/variant_kmer_analyser.py'
2023-12-14T02:48:14,710   adding 'kage/benchmarking/__init__.py'
2023-12-14T02:48:14,712   adding 'kage/benchmarking/vcf_preprocessing.py'
2023-12-14T02:48:14,714   adding 'kage/genotyping/__init__.py'
2023-12-14T02:48:14,715   adding 'kage/genotyping/combination_model_genotyper.py'
2023-12-14T02:48:14,716   adding 'kage/genotyping/multiallelic.py'
2023-12-14T02:48:14,718   adding 'kage/glimpse/__init__.py'
2023-12-14T02:48:14,719   adding 'kage/glimpse/glimpse_wrapper.py'
2023-12-14T02:48:14,721   adding 'kage/indexing/__init__.py'
2023-12-14T02:48:14,722   adding 'kage/indexing/div.py'
2023-12-14T02:48:14,724   adding 'kage/indexing/graph.py'
2023-12-14T02:48:14,725   adding 'kage/indexing/index_bundle.py'
2023-12-14T02:48:14,727   adding 'kage/indexing/kmer_scoring.py'
2023-12-14T02:48:14,729   adding 'kage/indexing/main.py'
2023-12-14T02:48:14,730   adding 'kage/indexing/modulo_filter.py'
2023-12-14T02:48:14,733   adding 'kage/indexing/path_based_count_model.py'
2023-12-14T02:48:14,735   adding 'kage/indexing/path_variant_indexing.py'
2023-12-14T02:48:14,738   adding 'kage/indexing/paths.py'
2023-12-14T02:48:14,745   adding 'kage/indexing/signatures.py'
2023-12-14T02:48:14,747   adding 'kage/indexing/sparse_haplotype_matrix.py'
2023-12-14T02:48:14,748   adding 'kage/indexing/tricky_variants.py'
2023-12-14T02:48:14,750   adding 'kage/models/__init__.py'
2023-12-14T02:48:14,751   adding 'kage/models/helper_index.py'
2023-12-14T02:48:14,752   adding 'kage/models/helper_index_using_duplicate_counts.py'
2023-12-14T02:48:14,754   adding 'kage/models/helper_model.py'
2023-12-14T02:48:14,756   adding 'kage/models/joint_distribution.py'
2023-12-14T02:48:14,757   adding 'kage/models/mapping_model.py'
2023-12-14T02:48:14,759   adding 'kage/models/models.py'
2023-12-14T02:48:14,762   adding 'kage/models/sampling_combo_model.py'
2023-12-14T02:48:14,763   adding 'kage/modles/__init__.py'
2023-12-14T02:48:14,765   adding 'kage/preprocessing/__init__.py'
2023-12-14T02:48:14,769   adding 'kage/preprocessing/variants.py'
2023-12-14T02:48:14,770   adding 'kage/simulation/__init__.py'
2023-12-14T02:48:14,772   adding 'kage/simulation/read_simulation.py'
2023-12-14T02:48:14,774   adding 'kage/simulation/simulation.py'
2023-12-14T02:48:14,781   adding 'kage_genotyper-0.2.7.dist-info/LICENSE'
2023-12-14T02:48:14,782   adding 'kage_genotyper-0.2.7.dist-info/METADATA'
2023-12-14T02:48:14,783   adding 'kage_genotyper-0.2.7.dist-info/WHEEL'
2023-12-14T02:48:14,784   adding 'kage_genotyper-0.2.7.dist-info/entry_points.txt'
2023-12-14T02:48:14,784   adding 'kage_genotyper-0.2.7.dist-info/top_level.txt'
2023-12-14T02:48:14,786   adding 'kage_genotyper-0.2.7.dist-info/RECORD'
2023-12-14T02:48:14,789   removing build/bdist.linux-armv7l/wheel
2023-12-14T02:48:14,916   Building wheel for kage-genotyper (setup.py): finished with status 'done'
2023-12-14T02:48:14,920   Created wheel for kage-genotyper: filename=kage_genotyper-0.2.7-py3-none-any.whl size=121467 sha256=8b95dcd13302dc1aeb5a90560d02410b2f9917286fa3c664bb9b82b5b3cd4667
2023-12-14T02:48:14,921   Stored in directory: /tmp/pip-ephem-wheel-cache-_3hc7ist/wheels/c4/5e/1d/9946456db3e08b9a882400b3e00648c182adbdf9450ec5eea9
2023-12-14T02:48:14,933 Successfully built kage-genotyper
2023-12-14T02:48:14,939 Removed build tracker: '/tmp/pip-build-tracker-sjkfwka5'