2023-12-14T04:59:46,576 Created temporary directory: /tmp/pip-build-tracker-99i5poye 2023-12-14T04:59:46,577 Initialized build tracking at /tmp/pip-build-tracker-99i5poye 2023-12-14T04:59:46,578 Created build tracker: /tmp/pip-build-tracker-99i5poye 2023-12-14T04:59:46,579 Entered build tracker: /tmp/pip-build-tracker-99i5poye 2023-12-14T04:59:46,580 Created temporary directory: /tmp/pip-wheel-qid1ujz3 2023-12-14T04:59:46,583 Created temporary directory: /tmp/pip-ephem-wheel-cache-4dbl1_pz 2023-12-14T04:59:46,608 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-14T04:59:46,611 2 location(s) to search for versions of ampal: 2023-12-14T04:59:46,611 * https://pypi.org/simple/ampal/ 2023-12-14T04:59:46,611 * https://www.piwheels.org/simple/ampal/ 2023-12-14T04:59:46,612 Fetching project page and analyzing links: https://pypi.org/simple/ampal/ 2023-12-14T04:59:46,613 Getting page https://pypi.org/simple/ampal/ 2023-12-14T04:59:46,614 Found index url https://pypi.org/simple/ 2023-12-14T04:59:46,823 Fetched page https://pypi.org/simple/ampal/ as application/vnd.pypi.simple.v1+json 2023-12-14T04:59:46,826 Found link https://files.pythonhosted.org/packages/3f/e5/03da3a77bba138c165451d3f8efb7fd32818aea4a6212b420c558e9088d8/AMPAL-1.0.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.0 2023-12-14T04:59:46,827 Found link https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.1 2023-12-14T04:59:46,827 Found link https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.1.0 2023-12-14T04:59:46,828 Found link https://files.pythonhosted.org/packages/f4/11/85ef80392ed433f9024abc0bacc2173dd88ce0e7c42f23b804cc3650b1e5/AMPAL-1.2.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.2.0 2023-12-14T04:59:46,829 Found link https://files.pythonhosted.org/packages/a4/9a/940d9cd5af9177e35487a99bf8bf0ae4c80b28eeca70c266ebc2f341cd4d/AMPAL-1.3.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.3.0 2023-12-14T04:59:46,829 Found link https://files.pythonhosted.org/packages/c9/14/728e14ff9e6c3372082ffc88a2f78016b05143f0d6bee5c432c002314169/AMPAL-1.4.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.4.0 2023-12-14T04:59:46,830 Found link https://files.pythonhosted.org/packages/83/d1/b310e662ee0fa4987e60088fb3f9590de690e01c25c1e682acb3905d9bfe/AMPAL-1.5.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.0 2023-12-14T04:59:46,838 Found link https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.1 2023-12-14T04:59:46,839 Fetching project page and analyzing links: https://www.piwheels.org/simple/ampal/ 2023-12-14T04:59:46,839 Getting page https://www.piwheels.org/simple/ampal/ 2023-12-14T04:59:46,841 Found index url https://www.piwheels.org/simple/ 2023-12-14T04:59:47,016 Fetched page https://www.piwheels.org/simple/ampal/ as text/html 2023-12-14T04:59:47,033 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv6l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,033 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv7l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,034 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv6l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,035 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv7l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,035 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv6l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,036 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv7l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,037 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv6l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,038 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv7l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,039 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv7l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,040 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv6l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,040 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv6l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,041 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv7l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,042 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv7l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,042 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv6l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,043 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv6l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,044 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv7l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,044 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv6l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,045 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv7l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,046 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv6l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,046 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv7l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,047 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv7l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,048 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv6l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,049 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv7l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,049 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv6l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,050 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv6l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,050 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv7l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,051 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv7l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,052 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv6l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,052 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv7l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,053 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv6l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,054 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,054 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,055 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv6l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,056 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv7l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,057 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,058 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,058 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv7l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,059 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv6l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,059 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,060 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,060 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,061 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,062 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,063 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,063 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,064 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,065 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv6l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,065 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv7l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,066 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv6l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,066 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv7l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,067 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,068 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,068 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,069 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,069 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,070 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,070 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv6l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,071 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv7l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,072 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv7l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,072 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv6l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,073 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,074 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,074 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,075 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,075 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,076 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T04:59:47,077 Skipping link: not a file: https://www.piwheels.org/simple/ampal/ 2023-12-14T04:59:47,078 Skipping link: not a file: https://pypi.org/simple/ampal/ 2023-12-14T04:59:47,097 Given no hashes to check 1 links for project 'ampal': discarding no candidates 2023-12-14T04:59:47,115 Collecting ampal==1.5.1 2023-12-14T04:59:47,118 Created temporary directory: /tmp/pip-unpack-f1f9smzp 2023-12-14T04:59:47,326 Downloading AMPAL-1.5.1.tar.gz (325 kB) 2023-12-14T04:59:47,577 Added ampal==1.5.1 from https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz to build tracker '/tmp/pip-build-tracker-99i5poye' 2023-12-14T04:59:47,582 Created temporary directory: /tmp/pip-build-env-rvvl4iq_ 2023-12-14T04:59:47,587 Installing build dependencies: started 2023-12-14T04:59:47,588 Running command pip subprocess to install build dependencies 2023-12-14T04:59:48,781 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-12-14T04:59:49,302 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-14T04:59:52,001 Collecting setuptools 2023-12-14T04:59:52,015 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.2-py3-none-any.whl (819 kB) 2023-12-14T04:59:52,240 Collecting wheel 2023-12-14T04:59:52,253 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2023-12-14T04:59:53,329 Collecting Cython 2023-12-14T04:59:53,345 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.6-cp311-cp311-linux_armv7l.whl (11.7 MB) 2023-12-14T04:59:56,791 Installing collected packages: wheel, setuptools, Cython 2023-12-14T04:59:57,405 Creating /tmp/pip-build-env-rvvl4iq_/overlay/local/bin 2023-12-14T04:59:57,415 changing mode of /tmp/pip-build-env-rvvl4iq_/overlay/local/bin/wheel to 755 2023-12-14T05:00:12,809 changing mode of /tmp/pip-build-env-rvvl4iq_/overlay/local/bin/cygdb to 755 2023-12-14T05:00:12,812 changing mode of /tmp/pip-build-env-rvvl4iq_/overlay/local/bin/cython to 755 2023-12-14T05:00:12,814 changing mode of /tmp/pip-build-env-rvvl4iq_/overlay/local/bin/cythonize to 755 2023-12-14T05:00:12,845 Successfully installed Cython-3.0.6 setuptools-69.0.2 wheel-0.42.0 2023-12-14T05:00:13,506 Installing build dependencies: finished with status 'done' 2023-12-14T05:00:13,554 Getting requirements to build wheel: started 2023-12-14T05:00:13,561 Running command Getting requirements to build wheel 2023-12-14T05:00:16,881 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-qid1ujz3/ampal_5a0f1a82efe747f6a16db46ef5c51f92/src/ampal/geometry.pyx 2023-12-14T05:00:16,882 tree = Parsing.p_module(s, pxd, full_module_name) 2023-12-14T05:00:20,830 Compiling src/ampal/geometry.pyx because it depends on /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/math.pxd. 2023-12-14T05:00:20,830 [1/1] Cythonizing src/ampal/geometry.pyx 2023-12-14T05:00:21,174 Getting requirements to build wheel: finished with status 'done' 2023-12-14T05:00:21,192 Created temporary directory: /tmp/pip-modern-metadata-pe7u2bym 2023-12-14T05:00:21,195 Preparing metadata (pyproject.toml): started 2023-12-14T05:00:21,196 Running command Preparing metadata (pyproject.toml) 2023-12-14T05:00:24,948 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored. 2023-12-14T05:00:24,948 !! 2023-12-14T05:00:24,950 ******************************************************************************** 2023-12-14T05:00:24,951 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T05:00:24,952 `description = 'A simple framework for representing biomolecular structure.'` 2023-12-14T05:00:24,954 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T05:00:24,955 consider this value unless `description` is listed as `dynamic`. 2023-12-14T05:00:24,956 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T05:00:24,958 To prevent this problem, you can list `description` under `dynamic` or alternatively 2023-12-14T05:00:24,958 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T05:00:24,959 configuration. 2023-12-14T05:00:24,960 ******************************************************************************** 2023-12-14T05:00:24,962 !! 2023-12-14T05:00:24,963 _handle_missing_dynamic(dist, project_table) 2023-12-14T05:00:24,963 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored. 2023-12-14T05:00:24,964 !! 2023-12-14T05:00:24,966 ******************************************************************************** 2023-12-14T05:00:24,967 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T05:00:24,969 `authors = 'Woolfson Group, University of Bristol'` 2023-12-14T05:00:24,971 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T05:00:24,971 consider this value unless `authors` is listed as `dynamic`. 2023-12-14T05:00:24,973 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T05:00:24,975 To prevent this problem, you can list `authors` under `dynamic` or alternatively 2023-12-14T05:00:24,976 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T05:00:24,977 configuration. 2023-12-14T05:00:24,977 ******************************************************************************** 2023-12-14T05:00:24,979 !! 2023-12-14T05:00:24,980 _handle_missing_dynamic(dist, project_table) 2023-12-14T05:00:24,981 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2023-12-14T05:00:24,982 !! 2023-12-14T05:00:24,984 ******************************************************************************** 2023-12-14T05:00:24,985 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T05:00:24,987 `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']` 2023-12-14T05:00:24,989 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T05:00:24,990 consider this value unless `classifiers` is listed as `dynamic`. 2023-12-14T05:00:24,991 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T05:00:24,993 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2023-12-14T05:00:24,994 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T05:00:24,995 configuration. 2023-12-14T05:00:24,996 ******************************************************************************** 2023-12-14T05:00:24,998 !! 2023-12-14T05:00:24,999 _handle_missing_dynamic(dist, project_table) 2023-12-14T05:00:25,000 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-12-14T05:00:25,001 corresp(dist, value, root_dir) 2023-12-14T05:00:25,270 running dist_info 2023-12-14T05:00:25,276 creating /tmp/pip-modern-metadata-pe7u2bym/AMPAL.egg-info 2023-12-14T05:00:25,282 writing /tmp/pip-modern-metadata-pe7u2bym/AMPAL.egg-info/PKG-INFO 2023-12-14T05:00:25,286 writing dependency_links to /tmp/pip-modern-metadata-pe7u2bym/AMPAL.egg-info/dependency_links.txt 2023-12-14T05:00:25,289 writing requirements to /tmp/pip-modern-metadata-pe7u2bym/AMPAL.egg-info/requires.txt 2023-12-14T05:00:25,290 writing top-level names to /tmp/pip-modern-metadata-pe7u2bym/AMPAL.egg-info/top_level.txt 2023-12-14T05:00:25,292 writing manifest file '/tmp/pip-modern-metadata-pe7u2bym/AMPAL.egg-info/SOURCES.txt' 2023-12-14T05:00:25,313 reading manifest file '/tmp/pip-modern-metadata-pe7u2bym/AMPAL.egg-info/SOURCES.txt' 2023-12-14T05:00:25,315 reading manifest template 'MANIFEST.in' 2023-12-14T05:00:25,317 warning: no files found matching 'LICENSE.txt' 2023-12-14T05:00:25,330 adding license file 'LICENSE' 2023-12-14T05:00:25,333 writing manifest file '/tmp/pip-modern-metadata-pe7u2bym/AMPAL.egg-info/SOURCES.txt' 2023-12-14T05:00:25,335 creating '/tmp/pip-modern-metadata-pe7u2bym/AMPAL-1.5.1.dist-info' 2023-12-14T05:00:25,528 Preparing metadata (pyproject.toml): finished with status 'done' 2023-12-14T05:00:25,533 Source in /tmp/pip-wheel-qid1ujz3/ampal_5a0f1a82efe747f6a16db46ef5c51f92 has version 1.5.1, which satisfies requirement ampal==1.5.1 from https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz 2023-12-14T05:00:25,535 Removed ampal==1.5.1 from https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz from build tracker '/tmp/pip-build-tracker-99i5poye' 2023-12-14T05:00:25,541 Created temporary directory: /tmp/pip-unpack-opyq59km 2023-12-14T05:00:25,542 Created temporary directory: /tmp/pip-unpack-uc__g6im 2023-12-14T05:00:25,548 Building wheels for collected packages: ampal 2023-12-14T05:00:25,553 Created temporary directory: /tmp/pip-wheel-6_tmsfpi 2023-12-14T05:00:25,554 Destination directory: /tmp/pip-wheel-6_tmsfpi 2023-12-14T05:00:25,556 Building wheel for ampal (pyproject.toml): started 2023-12-14T05:00:25,558 Running command Building wheel for ampal (pyproject.toml) 2023-12-14T05:00:28,971 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored. 2023-12-14T05:00:28,971 !! 2023-12-14T05:00:28,973 ******************************************************************************** 2023-12-14T05:00:28,973 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T05:00:28,975 `description = 'A simple framework for representing biomolecular structure.'` 2023-12-14T05:00:28,976 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T05:00:28,976 consider this value unless `description` is listed as `dynamic`. 2023-12-14T05:00:28,978 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T05:00:28,979 To prevent this problem, you can list `description` under `dynamic` or alternatively 2023-12-14T05:00:28,980 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T05:00:28,980 configuration. 2023-12-14T05:00:28,981 ******************************************************************************** 2023-12-14T05:00:28,983 !! 2023-12-14T05:00:28,983 _handle_missing_dynamic(dist, project_table) 2023-12-14T05:00:28,984 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored. 2023-12-14T05:00:28,984 !! 2023-12-14T05:00:28,985 ******************************************************************************** 2023-12-14T05:00:28,986 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T05:00:28,987 `authors = 'Woolfson Group, University of Bristol'` 2023-12-14T05:00:28,988 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T05:00:28,988 consider this value unless `authors` is listed as `dynamic`. 2023-12-14T05:00:28,989 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T05:00:28,990 To prevent this problem, you can list `authors` under `dynamic` or alternatively 2023-12-14T05:00:28,991 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T05:00:28,991 configuration. 2023-12-14T05:00:28,992 ******************************************************************************** 2023-12-14T05:00:28,993 !! 2023-12-14T05:00:28,993 _handle_missing_dynamic(dist, project_table) 2023-12-14T05:00:28,994 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2023-12-14T05:00:28,994 !! 2023-12-14T05:00:28,995 ******************************************************************************** 2023-12-14T05:00:28,996 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T05:00:28,997 `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']` 2023-12-14T05:00:28,998 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T05:00:28,998 consider this value unless `classifiers` is listed as `dynamic`. 2023-12-14T05:00:28,999 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T05:00:29,000 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2023-12-14T05:00:29,001 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T05:00:29,002 configuration. 2023-12-14T05:00:29,002 ******************************************************************************** 2023-12-14T05:00:29,003 !! 2023-12-14T05:00:29,004 _handle_missing_dynamic(dist, project_table) 2023-12-14T05:00:29,004 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-12-14T05:00:29,005 corresp(dist, value, root_dir) 2023-12-14T05:00:29,223 running bdist_wheel 2023-12-14T05:00:29,242 running build 2023-12-14T05:00:29,243 running build_py 2023-12-14T05:00:29,248 creating build 2023-12-14T05:00:29,248 creating build/lib.linux-armv7l-cpython-311 2023-12-14T05:00:29,249 creating build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,250 copying src/ampal/base_ampal.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,253 copying src/ampal/ampal_warnings.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,256 copying src/ampal/assembly.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,258 copying src/ampal/dssp.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,261 copying src/ampal/nucleic_acid.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,263 copying src/ampal/protein.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,266 copying src/ampal/ligands.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,268 copying src/ampal/naccess.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,270 copying src/ampal/__init__.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,272 copying src/ampal/align.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,275 copying src/ampal/analyse_protein.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,277 copying src/ampal/interactions.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,280 copying src/ampal/data.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,282 copying src/ampal/pdb_parser.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,284 copying src/ampal/amino_acids.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,286 copying src/ampal/pseudo_atoms.py -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,288 running egg_info 2023-12-14T05:00:29,292 writing src/AMPAL.egg-info/PKG-INFO 2023-12-14T05:00:29,295 writing dependency_links to src/AMPAL.egg-info/dependency_links.txt 2023-12-14T05:00:29,297 writing requirements to src/AMPAL.egg-info/requires.txt 2023-12-14T05:00:29,300 writing top-level names to src/AMPAL.egg-info/top_level.txt 2023-12-14T05:00:29,307 reading manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2023-12-14T05:00:29,310 reading manifest template 'MANIFEST.in' 2023-12-14T05:00:29,310 warning: no files found matching 'LICENSE.txt' 2023-12-14T05:00:29,323 adding license file 'LICENSE' 2023-12-14T05:00:29,326 writing manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2023-12-14T05:00:29,328 /tmp/pip-build-env-rvvl4iq_/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'ampal.datafiles' is absent from the `packages` configuration. 2023-12-14T05:00:29,329 !! 2023-12-14T05:00:29,330 ******************************************************************************** 2023-12-14T05:00:29,330 ############################ 2023-12-14T05:00:29,331 # Package would be ignored # 2023-12-14T05:00:29,331 ############################ 2023-12-14T05:00:29,332 Python recognizes 'ampal.datafiles' as an importable package[^1], 2023-12-14T05:00:29,333 but it is absent from setuptools' `packages` configuration. 2023-12-14T05:00:29,334 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-14T05:00:29,334 package, please make sure that 'ampal.datafiles' is explicitly added 2023-12-14T05:00:29,335 to the `packages` configuration field. 2023-12-14T05:00:29,336 Alternatively, you can also rely on setuptools' discovery methods 2023-12-14T05:00:29,337 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-14T05:00:29,337 instead of `find_packages(...)`/`find:`). 2023-12-14T05:00:29,340 You can read more about "package discovery" on setuptools documentation page: 2023-12-14T05:00:29,342 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-14T05:00:29,344 If you don't want 'ampal.datafiles' to be distributed and are 2023-12-14T05:00:29,346 already explicitly excluding 'ampal.datafiles' via 2023-12-14T05:00:29,355 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-14T05:00:29,359 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-14T05:00:29,362 combination with a more fine grained `package-data` configuration. 2023-12-14T05:00:29,363 You can read more about "package data files" on setuptools documentation page: 2023-12-14T05:00:29,365 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-14T05:00:29,367 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-14T05:00:29,367 even if it does not contain any `.py` files. 2023-12-14T05:00:29,367 On the other hand, currently there is no concept of package data 2023-12-14T05:00:29,368 directory, all directories are treated like packages. 2023-12-14T05:00:29,368 ******************************************************************************** 2023-12-14T05:00:29,369 !! 2023-12-14T05:00:29,370 check.warn(importable) 2023-12-14T05:00:29,370 copying src/ampal/geometry.c -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,372 copying src/ampal/geometry.pyx -> build/lib.linux-armv7l-cpython-311/ampal 2023-12-14T05:00:29,372 creating build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-12-14T05:00:29,373 copying src/ampal/datafiles/amino_acids.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-12-14T05:00:29,373 copying src/ampal/datafiles/chemical_elements.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-12-14T05:00:29,377 copying src/ampal/datafiles/pdb_atom_column_format.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2023-12-14T05:00:29,382 running build_ext 2023-12-14T05:00:29,388 building 'ampal.geometry' extension 2023-12-14T05:00:29,389 creating build/temp.linux-armv7l-cpython-311 2023-12-14T05:00:29,389 creating build/temp.linux-armv7l-cpython-311/src 2023-12-14T05:00:29,391 creating build/temp.linux-armv7l-cpython-311/src/ampal 2023-12-14T05:00:29,392 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c src/ampal/geometry.c -o build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o 2023-12-14T05:00:35,309 src/ampal/geometry.c:7369:18: warning: ‘__pyx_f_5ampal_8geometry__unit_vector’ defined but not used [-Wunused-function] 2023-12-14T05:00:35,310 7369 | static PyObject *__pyx_f_5ampal_8geometry__unit_vector(double *__pyx_v_a) { 2023-12-14T05:00:35,311 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-12-14T05:00:35,316 src/ampal/geometry.c:6448:15: warning: ‘__pyx_f_5ampal_8geometry__dot_product_2d’ defined but not used [-Wunused-function] 2023-12-14T05:00:35,317 6448 | static double __pyx_f_5ampal_8geometry__dot_product_2d(double *__pyx_v_a, double *__pyx_v_b) { 2023-12-14T05:00:35,318 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-12-14T05:02:03,929 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so 2023-12-14T05:02:04,172 installing to build/bdist.linux-armv7l/wheel 2023-12-14T05:02:04,173 running install 2023-12-14T05:02:04,196 running install_lib 2023-12-14T05:02:04,201 creating build/bdist.linux-armv7l 2023-12-14T05:02:04,201 creating build/bdist.linux-armv7l/wheel 2023-12-14T05:02:04,203 creating build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,204 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,255 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.pyx -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,258 copying build/lib.linux-armv7l-cpython-311/ampal/base_ampal.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,261 copying build/lib.linux-armv7l-cpython-311/ampal/ampal_warnings.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,262 copying build/lib.linux-armv7l-cpython-311/ampal/assembly.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,265 copying build/lib.linux-armv7l-cpython-311/ampal/dssp.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,267 copying build/lib.linux-armv7l-cpython-311/ampal/nucleic_acid.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,269 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.c -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,302 copying build/lib.linux-armv7l-cpython-311/ampal/protein.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,304 copying build/lib.linux-armv7l-cpython-311/ampal/ligands.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,306 copying build/lib.linux-armv7l-cpython-311/ampal/naccess.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,309 creating build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-12-14T05:02:04,309 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/amino_acids.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-12-14T05:02:04,313 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/pdb_atom_column_format.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-12-14T05:02:04,316 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/chemical_elements.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-12-14T05:02:04,320 copying build/lib.linux-armv7l-cpython-311/ampal/__init__.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,321 copying build/lib.linux-armv7l-cpython-311/ampal/align.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,323 copying build/lib.linux-armv7l-cpython-311/ampal/analyse_protein.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,326 copying build/lib.linux-armv7l-cpython-311/ampal/interactions.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,329 copying build/lib.linux-armv7l-cpython-311/ampal/data.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,330 copying build/lib.linux-armv7l-cpython-311/ampal/pdb_parser.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,333 copying build/lib.linux-armv7l-cpython-311/ampal/amino_acids.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,335 copying build/lib.linux-armv7l-cpython-311/ampal/pseudo_atoms.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T05:02:04,337 running install_egg_info 2023-12-14T05:02:04,341 Copying src/AMPAL.egg-info to build/bdist.linux-armv7l/wheel/AMPAL-1.5.1-py3.11.egg-info 2023-12-14T05:02:04,352 running install_scripts 2023-12-14T05:02:04,399 creating build/bdist.linux-armv7l/wheel/AMPAL-1.5.1.dist-info/WHEEL 2023-12-14T05:02:04,402 creating '/tmp/pip-wheel-6_tmsfpi/.tmp-6zr6oyhl/AMPAL-1.5.1-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-14T05:02:04,405 adding 'ampal/__init__.py' 2023-12-14T05:02:04,407 adding 'ampal/align.py' 2023-12-14T05:02:04,409 adding 'ampal/amino_acids.py' 2023-12-14T05:02:04,411 adding 'ampal/ampal_warnings.py' 2023-12-14T05:02:04,414 adding 'ampal/analyse_protein.py' 2023-12-14T05:02:04,416 adding 'ampal/assembly.py' 2023-12-14T05:02:04,420 adding 'ampal/base_ampal.py' 2023-12-14T05:02:04,421 adding 'ampal/data.py' 2023-12-14T05:02:04,423 adding 'ampal/dssp.py' 2023-12-14T05:02:04,555 adding 'ampal/geometry.c' 2023-12-14T05:02:05,056 adding 'ampal/geometry.cpython-311-arm-linux-gnueabihf.so' 2023-12-14T05:02:05,077 adding 'ampal/geometry.pyx' 2023-12-14T05:02:05,079 adding 'ampal/interactions.py' 2023-12-14T05:02:05,080 adding 'ampal/ligands.py' 2023-12-14T05:02:05,082 adding 'ampal/naccess.py' 2023-12-14T05:02:05,083 adding 'ampal/nucleic_acid.py' 2023-12-14T05:02:05,086 adding 'ampal/pdb_parser.py' 2023-12-14T05:02:05,090 adding 'ampal/protein.py' 2023-12-14T05:02:05,092 adding 'ampal/pseudo_atoms.py' 2023-12-14T05:02:05,099 adding 'ampal/datafiles/amino_acids.json' 2023-12-14T05:02:05,104 adding 'ampal/datafiles/chemical_elements.json' 2023-12-14T05:02:05,121 adding 'ampal/datafiles/pdb_atom_column_format.json' 2023-12-14T05:02:05,123 adding 'AMPAL-1.5.1.dist-info/LICENSE' 2023-12-14T05:02:05,124 adding 'AMPAL-1.5.1.dist-info/METADATA' 2023-12-14T05:02:05,125 adding 'AMPAL-1.5.1.dist-info/WHEEL' 2023-12-14T05:02:05,126 adding 'AMPAL-1.5.1.dist-info/top_level.txt' 2023-12-14T05:02:05,127 adding 'AMPAL-1.5.1.dist-info/RECORD' 2023-12-14T05:02:05,143 removing build/bdist.linux-armv7l/wheel 2023-12-14T05:02:05,315 Building wheel for ampal (pyproject.toml): finished with status 'done' 2023-12-14T05:02:05,355 Created wheel for ampal: filename=AMPAL-1.5.1-cp311-cp311-linux_armv7l.whl size=1354496 sha256=293d80d7e02f1e3ab614a717dec0f5999b0ae2c4a43f2a0989d56a1f4514bd9d 2023-12-14T05:02:05,356 Stored in directory: /tmp/pip-ephem-wheel-cache-4dbl1_pz/wheels/81/fb/9c/021e637c5cedeba429d5e1201c08616691ea1e97e02989a24b 2023-12-14T05:02:05,367 Successfully built ampal 2023-12-14T05:02:05,414 Removed build tracker: '/tmp/pip-build-tracker-99i5poye'