2023-12-14T06:43:09,541 Created temporary directory: /tmp/pip-build-tracker-9xyhbuxh 2023-12-14T06:43:09,542 Initialized build tracking at /tmp/pip-build-tracker-9xyhbuxh 2023-12-14T06:43:09,543 Created build tracker: /tmp/pip-build-tracker-9xyhbuxh 2023-12-14T06:43:09,543 Entered build tracker: /tmp/pip-build-tracker-9xyhbuxh 2023-12-14T06:43:09,543 Created temporary directory: /tmp/pip-wheel-a5qbsjuo 2023-12-14T06:43:09,548 Created temporary directory: /tmp/pip-ephem-wheel-cache-fmevbzou 2023-12-14T06:43:09,572 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-14T06:43:09,575 2 location(s) to search for versions of ampal: 2023-12-14T06:43:09,575 * https://pypi.org/simple/ampal/ 2023-12-14T06:43:09,575 * https://www.piwheels.org/simple/ampal/ 2023-12-14T06:43:09,576 Fetching project page and analyzing links: https://pypi.org/simple/ampal/ 2023-12-14T06:43:09,576 Getting page https://pypi.org/simple/ampal/ 2023-12-14T06:43:09,578 Found index url https://pypi.org/simple/ 2023-12-14T06:43:09,630 Fetched page https://pypi.org/simple/ampal/ as application/vnd.pypi.simple.v1+json 2023-12-14T06:43:09,632 Found link https://files.pythonhosted.org/packages/3f/e5/03da3a77bba138c165451d3f8efb7fd32818aea4a6212b420c558e9088d8/AMPAL-1.0.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.0 2023-12-14T06:43:09,632 Found link https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.1 2023-12-14T06:43:09,633 Found link https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.1.0 2023-12-14T06:43:09,633 Found link https://files.pythonhosted.org/packages/f4/11/85ef80392ed433f9024abc0bacc2173dd88ce0e7c42f23b804cc3650b1e5/AMPAL-1.2.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.2.0 2023-12-14T06:43:09,633 Found link https://files.pythonhosted.org/packages/a4/9a/940d9cd5af9177e35487a99bf8bf0ae4c80b28eeca70c266ebc2f341cd4d/AMPAL-1.3.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.3.0 2023-12-14T06:43:09,634 Found link https://files.pythonhosted.org/packages/c9/14/728e14ff9e6c3372082ffc88a2f78016b05143f0d6bee5c432c002314169/AMPAL-1.4.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.4.0 2023-12-14T06:43:09,634 Found link https://files.pythonhosted.org/packages/83/d1/b310e662ee0fa4987e60088fb3f9590de690e01c25c1e682acb3905d9bfe/AMPAL-1.5.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.0 2023-12-14T06:43:09,634 Found link https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.1 2023-12-14T06:43:09,634 Fetching project page and analyzing links: https://www.piwheels.org/simple/ampal/ 2023-12-14T06:43:09,635 Getting page https://www.piwheels.org/simple/ampal/ 2023-12-14T06:43:09,636 Found index url https://www.piwheels.org/simple/ 2023-12-14T06:43:09,710 Fetched page https://www.piwheels.org/simple/ampal/ as text/html 2023-12-14T06:43:09,729 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp311-cp311-linux_armv6l.whl#sha256=293d80d7e02f1e3ab614a717dec0f5999b0ae2c4a43f2a0989d56a1f4514bd9d (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2023-12-14T06:43:09,729 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp311-cp311-linux_armv7l.whl#sha256=293d80d7e02f1e3ab614a717dec0f5999b0ae2c4a43f2a0989d56a1f4514bd9d (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2023-12-14T06:43:09,729 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv6l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,729 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv7l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,730 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv6l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,730 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv7l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,730 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv6l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,730 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv7l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,730 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv6l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,731 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv7l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,731 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv7l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,731 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv6l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,731 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv6l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,731 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv7l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,732 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv7l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,732 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv6l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,732 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv6l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,732 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv7l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,732 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv6l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,733 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv7l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,733 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv6l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,733 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv7l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,733 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv7l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,733 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv6l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,734 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv7l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,734 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv6l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,734 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv6l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,734 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv7l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,734 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv7l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,734 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv6l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,735 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv7l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,735 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv6l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,735 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,735 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,735 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv6l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,736 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv7l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,736 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,736 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,736 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv7l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,736 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv6l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,737 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,737 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,737 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,737 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,737 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,737 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,738 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,738 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,738 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv6l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,738 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv7l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,738 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv6l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,739 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv7l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,739 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,739 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,739 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,739 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,740 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,740 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,740 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv6l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,740 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv7l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,740 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv7l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,741 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv6l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,741 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,741 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,741 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,741 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,741 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,742 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2023-12-14T06:43:09,742 Skipping link: not a file: https://www.piwheels.org/simple/ampal/ 2023-12-14T06:43:09,742 Skipping link: not a file: https://pypi.org/simple/ampal/ 2023-12-14T06:43:09,761 Given no hashes to check 1 links for project 'ampal': discarding no candidates 2023-12-14T06:43:09,784 Collecting ampal==1.5.1 2023-12-14T06:43:09,787 Created temporary directory: /tmp/pip-unpack-561j9mr9 2023-12-14T06:43:09,848 Downloading AMPAL-1.5.1.tar.gz (325 kB) 2023-12-14T06:43:10,037 Added ampal==1.5.1 from https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz to build tracker '/tmp/pip-build-tracker-9xyhbuxh' 2023-12-14T06:43:10,042 Created temporary directory: /tmp/pip-build-env-0vj5lkes 2023-12-14T06:43:10,052 Installing build dependencies: started 2023-12-14T06:43:10,053 Running command pip subprocess to install build dependencies 2023-12-14T06:43:11,210 Using pip 23.3.1 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2023-12-14T06:43:11,945 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-14T06:43:13,422 Collecting setuptools 2023-12-14T06:43:13,438 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.2-py3-none-any.whl (819 kB) 2023-12-14T06:43:13,690 Collecting wheel 2023-12-14T06:43:13,706 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2023-12-14T06:43:14,906 Collecting Cython 2023-12-14T06:43:14,922 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.6-cp39-cp39-linux_armv7l.whl (10.7 MB) 2023-12-14T06:43:16,959 Installing collected packages: wheel, setuptools, Cython 2023-12-14T06:43:17,176 Creating /tmp/pip-build-env-0vj5lkes/overlay/bin 2023-12-14T06:43:17,178 changing mode of /tmp/pip-build-env-0vj5lkes/overlay/bin/wheel to 755 2023-12-14T06:43:23,001 changing mode of /tmp/pip-build-env-0vj5lkes/overlay/bin/cygdb to 755 2023-12-14T06:43:23,004 changing mode of /tmp/pip-build-env-0vj5lkes/overlay/bin/cython to 755 2023-12-14T06:43:23,006 changing mode of /tmp/pip-build-env-0vj5lkes/overlay/bin/cythonize to 755 2023-12-14T06:43:23,027 Successfully installed Cython-3.0.6 setuptools-69.0.2 wheel-0.42.0 2023-12-14T06:43:23,559 Installing build dependencies: finished with status 'done' 2023-12-14T06:43:23,564 Getting requirements to build wheel: started 2023-12-14T06:43:23,565 Running command Getting requirements to build wheel 2023-12-14T06:43:25,859 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-a5qbsjuo/ampal_969edf6b86d04de08d409ae7d3d97eb7/src/ampal/geometry.pyx 2023-12-14T06:43:25,860 tree = Parsing.p_module(s, pxd, full_module_name) 2023-12-14T06:43:27,813 Compiling src/ampal/geometry.pyx because it depends on /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/Cython/Includes/libc/math.pxd. 2023-12-14T06:43:27,813 [1/1] Cythonizing src/ampal/geometry.pyx 2023-12-14T06:43:28,080 Getting requirements to build wheel: finished with status 'done' 2023-12-14T06:43:28,090 Created temporary directory: /tmp/pip-modern-metadata-bc5jifjm 2023-12-14T06:43:28,093 Preparing metadata (pyproject.toml): started 2023-12-14T06:43:28,094 Running command Preparing metadata (pyproject.toml) 2023-12-14T06:43:29,338 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored. 2023-12-14T06:43:29,338 !! 2023-12-14T06:43:29,339 ******************************************************************************** 2023-12-14T06:43:29,339 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T06:43:29,339 `description = 'A simple framework for representing biomolecular structure.'` 2023-12-14T06:43:29,339 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T06:43:29,339 consider this value unless `description` is listed as `dynamic`. 2023-12-14T06:43:29,340 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T06:43:29,340 To prevent this problem, you can list `description` under `dynamic` or alternatively 2023-12-14T06:43:29,340 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T06:43:29,340 configuration. 2023-12-14T06:43:29,340 ******************************************************************************** 2023-12-14T06:43:29,341 !! 2023-12-14T06:43:29,341 _handle_missing_dynamic(dist, project_table) 2023-12-14T06:43:29,341 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored. 2023-12-14T06:43:29,341 !! 2023-12-14T06:43:29,341 ******************************************************************************** 2023-12-14T06:43:29,342 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T06:43:29,342 `authors = 'Woolfson Group, University of Bristol'` 2023-12-14T06:43:29,342 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T06:43:29,342 consider this value unless `authors` is listed as `dynamic`. 2023-12-14T06:43:29,342 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T06:43:29,343 To prevent this problem, you can list `authors` under `dynamic` or alternatively 2023-12-14T06:43:29,343 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T06:43:29,343 configuration. 2023-12-14T06:43:29,343 ******************************************************************************** 2023-12-14T06:43:29,343 !! 2023-12-14T06:43:29,343 _handle_missing_dynamic(dist, project_table) 2023-12-14T06:43:29,344 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2023-12-14T06:43:29,344 !! 2023-12-14T06:43:29,344 ******************************************************************************** 2023-12-14T06:43:29,344 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T06:43:29,344 `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']` 2023-12-14T06:43:29,345 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T06:43:29,345 consider this value unless `classifiers` is listed as `dynamic`. 2023-12-14T06:43:29,345 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T06:43:29,345 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2023-12-14T06:43:29,346 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T06:43:29,346 configuration. 2023-12-14T06:43:29,346 ******************************************************************************** 2023-12-14T06:43:29,346 !! 2023-12-14T06:43:29,347 _handle_missing_dynamic(dist, project_table) 2023-12-14T06:43:29,347 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-12-14T06:43:29,347 corresp(dist, value, root_dir) 2023-12-14T06:43:29,611 running dist_info 2023-12-14T06:43:29,617 creating /tmp/pip-modern-metadata-bc5jifjm/AMPAL.egg-info 2023-12-14T06:43:29,622 writing /tmp/pip-modern-metadata-bc5jifjm/AMPAL.egg-info/PKG-INFO 2023-12-14T06:43:29,626 writing dependency_links to /tmp/pip-modern-metadata-bc5jifjm/AMPAL.egg-info/dependency_links.txt 2023-12-14T06:43:29,628 writing requirements to /tmp/pip-modern-metadata-bc5jifjm/AMPAL.egg-info/requires.txt 2023-12-14T06:43:29,629 writing top-level names to /tmp/pip-modern-metadata-bc5jifjm/AMPAL.egg-info/top_level.txt 2023-12-14T06:43:29,630 writing manifest file '/tmp/pip-modern-metadata-bc5jifjm/AMPAL.egg-info/SOURCES.txt' 2023-12-14T06:43:29,653 reading manifest file '/tmp/pip-modern-metadata-bc5jifjm/AMPAL.egg-info/SOURCES.txt' 2023-12-14T06:43:29,655 reading manifest template 'MANIFEST.in' 2023-12-14T06:43:29,656 warning: no files found matching 'LICENSE.txt' 2023-12-14T06:43:29,667 adding license file 'LICENSE' 2023-12-14T06:43:29,670 writing manifest file '/tmp/pip-modern-metadata-bc5jifjm/AMPAL.egg-info/SOURCES.txt' 2023-12-14T06:43:29,671 creating '/tmp/pip-modern-metadata-bc5jifjm/AMPAL-1.5.1.dist-info' 2023-12-14T06:43:29,838 Preparing metadata (pyproject.toml): finished with status 'done' 2023-12-14T06:43:29,845 Source in /tmp/pip-wheel-a5qbsjuo/ampal_969edf6b86d04de08d409ae7d3d97eb7 has version 1.5.1, which satisfies requirement ampal==1.5.1 from https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz 2023-12-14T06:43:29,846 Removed ampal==1.5.1 from https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz from build tracker '/tmp/pip-build-tracker-9xyhbuxh' 2023-12-14T06:43:29,852 Created temporary directory: /tmp/pip-unpack-k15zyv6a 2023-12-14T06:43:29,853 Created temporary directory: /tmp/pip-unpack-mgmqv3_q 2023-12-14T06:43:29,860 Building wheels for collected packages: ampal 2023-12-14T06:43:29,864 Created temporary directory: /tmp/pip-wheel-tjeaa6a_ 2023-12-14T06:43:29,864 Destination directory: /tmp/pip-wheel-tjeaa6a_ 2023-12-14T06:43:29,866 Building wheel for ampal (pyproject.toml): started 2023-12-14T06:43:29,867 Running command Building wheel for ampal (pyproject.toml) 2023-12-14T06:43:31,079 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored. 2023-12-14T06:43:31,080 !! 2023-12-14T06:43:31,080 ******************************************************************************** 2023-12-14T06:43:31,080 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T06:43:31,081 `description = 'A simple framework for representing biomolecular structure.'` 2023-12-14T06:43:31,081 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T06:43:31,081 consider this value unless `description` is listed as `dynamic`. 2023-12-14T06:43:31,081 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T06:43:31,082 To prevent this problem, you can list `description` under `dynamic` or alternatively 2023-12-14T06:43:31,082 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T06:43:31,082 configuration. 2023-12-14T06:43:31,082 ******************************************************************************** 2023-12-14T06:43:31,082 !! 2023-12-14T06:43:31,082 _handle_missing_dynamic(dist, project_table) 2023-12-14T06:43:31,083 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored. 2023-12-14T06:43:31,083 !! 2023-12-14T06:43:31,083 ******************************************************************************** 2023-12-14T06:43:31,083 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T06:43:31,083 `authors = 'Woolfson Group, University of Bristol'` 2023-12-14T06:43:31,084 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T06:43:31,084 consider this value unless `authors` is listed as `dynamic`. 2023-12-14T06:43:31,084 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T06:43:31,084 To prevent this problem, you can list `authors` under `dynamic` or alternatively 2023-12-14T06:43:31,084 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T06:43:31,085 configuration. 2023-12-14T06:43:31,085 ******************************************************************************** 2023-12-14T06:43:31,085 !! 2023-12-14T06:43:31,085 _handle_missing_dynamic(dist, project_table) 2023-12-14T06:43:31,085 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:75: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2023-12-14T06:43:31,085 !! 2023-12-14T06:43:31,085 ******************************************************************************** 2023-12-14T06:43:31,086 The following seems to be defined outside of `pyproject.toml`: 2023-12-14T06:43:31,086 `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']` 2023-12-14T06:43:31,086 According to the spec (see the link below), however, setuptools CANNOT 2023-12-14T06:43:31,086 consider this value unless `classifiers` is listed as `dynamic`. 2023-12-14T06:43:31,086 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2023-12-14T06:43:31,087 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2023-12-14T06:43:31,087 remove the `[project]` table from your file and rely entirely on other means of 2023-12-14T06:43:31,087 configuration. 2023-12-14T06:43:31,087 ******************************************************************************** 2023-12-14T06:43:31,087 !! 2023-12-14T06:43:31,087 _handle_missing_dynamic(dist, project_table) 2023-12-14T06:43:31,088 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-12-14T06:43:31,088 corresp(dist, value, root_dir) 2023-12-14T06:43:31,332 running bdist_wheel 2023-12-14T06:43:31,352 running build 2023-12-14T06:43:31,353 running build_py 2023-12-14T06:43:31,359 creating build 2023-12-14T06:43:31,359 creating build/lib.linux-armv7l-cpython-39 2023-12-14T06:43:31,360 creating build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,361 copying src/ampal/ampal_warnings.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,363 copying src/ampal/interactions.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,365 copying src/ampal/dssp.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,367 copying src/ampal/align.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,369 copying src/ampal/ligands.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,371 copying src/ampal/data.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,373 copying src/ampal/__init__.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,374 copying src/ampal/analyse_protein.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,377 copying src/ampal/pseudo_atoms.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,379 copying src/ampal/nucleic_acid.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,381 copying src/ampal/base_ampal.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,384 copying src/ampal/assembly.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,386 copying src/ampal/pdb_parser.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,389 copying src/ampal/amino_acids.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,392 copying src/ampal/naccess.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,394 copying src/ampal/protein.py -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,397 running egg_info 2023-12-14T06:43:31,402 writing src/AMPAL.egg-info/PKG-INFO 2023-12-14T06:43:31,404 writing dependency_links to src/AMPAL.egg-info/dependency_links.txt 2023-12-14T06:43:31,406 writing requirements to src/AMPAL.egg-info/requires.txt 2023-12-14T06:43:31,407 writing top-level names to src/AMPAL.egg-info/top_level.txt 2023-12-14T06:43:31,417 reading manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2023-12-14T06:43:31,419 reading manifest template 'MANIFEST.in' 2023-12-14T06:43:31,420 warning: no files found matching 'LICENSE.txt' 2023-12-14T06:43:31,432 adding license file 'LICENSE' 2023-12-14T06:43:31,435 writing manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2023-12-14T06:43:31,438 /tmp/pip-build-env-0vj5lkes/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'ampal.datafiles' is absent from the `packages` configuration. 2023-12-14T06:43:31,438 !! 2023-12-14T06:43:31,438 ******************************************************************************** 2023-12-14T06:43:31,438 ############################ 2023-12-14T06:43:31,438 # Package would be ignored # 2023-12-14T06:43:31,438 ############################ 2023-12-14T06:43:31,439 Python recognizes 'ampal.datafiles' as an importable package[^1], 2023-12-14T06:43:31,439 but it is absent from setuptools' `packages` configuration. 2023-12-14T06:43:31,439 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-14T06:43:31,439 package, please make sure that 'ampal.datafiles' is explicitly added 2023-12-14T06:43:31,439 to the `packages` configuration field. 2023-12-14T06:43:31,439 Alternatively, you can also rely on setuptools' discovery methods 2023-12-14T06:43:31,440 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-14T06:43:31,440 instead of `find_packages(...)`/`find:`). 2023-12-14T06:43:31,440 You can read more about "package discovery" on setuptools documentation page: 2023-12-14T06:43:31,440 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-14T06:43:31,441 If you don't want 'ampal.datafiles' to be distributed and are 2023-12-14T06:43:31,441 already explicitly excluding 'ampal.datafiles' via 2023-12-14T06:43:31,441 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-14T06:43:31,441 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-14T06:43:31,441 combination with a more fine grained `package-data` configuration. 2023-12-14T06:43:31,441 You can read more about "package data files" on setuptools documentation page: 2023-12-14T06:43:31,442 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-14T06:43:31,442 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-14T06:43:31,442 even if it does not contain any `.py` files. 2023-12-14T06:43:31,442 On the other hand, currently there is no concept of package data 2023-12-14T06:43:31,442 directory, all directories are treated like packages. 2023-12-14T06:43:31,443 ******************************************************************************** 2023-12-14T06:43:31,443 !! 2023-12-14T06:43:31,443 check.warn(importable) 2023-12-14T06:43:31,443 copying src/ampal/geometry.c -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,472 copying src/ampal/geometry.pyx -> build/lib.linux-armv7l-cpython-39/ampal 2023-12-14T06:43:31,475 creating build/lib.linux-armv7l-cpython-39/ampal/datafiles 2023-12-14T06:43:31,476 copying src/ampal/datafiles/amino_acids.json -> build/lib.linux-armv7l-cpython-39/ampal/datafiles 2023-12-14T06:43:31,485 copying src/ampal/datafiles/chemical_elements.json -> build/lib.linux-armv7l-cpython-39/ampal/datafiles 2023-12-14T06:43:31,489 copying src/ampal/datafiles/pdb_atom_column_format.json -> build/lib.linux-armv7l-cpython-39/ampal/datafiles 2023-12-14T06:43:31,493 running build_ext 2023-12-14T06:43:31,500 building 'ampal.geometry' extension 2023-12-14T06:43:31,501 creating build/temp.linux-armv7l-cpython-39 2023-12-14T06:43:31,502 creating build/temp.linux-armv7l-cpython-39/src 2023-12-14T06:43:31,503 creating build/temp.linux-armv7l-cpython-39/src/ampal 2023-12-14T06:43:31,504 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c src/ampal/geometry.c -o build/temp.linux-armv7l-cpython-39/src/ampal/geometry.o 2023-12-14T06:43:35,283 src/ampal/geometry.c:7369:18: warning: ‘__pyx_f_5ampal_8geometry__unit_vector’ defined but not used [-Wunused-function] 2023-12-14T06:43:35,284 7369 | static PyObject *__pyx_f_5ampal_8geometry__unit_vector(double *__pyx_v_a) { 2023-12-14T06:43:35,284 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-12-14T06:43:35,287 src/ampal/geometry.c:6448:15: warning: ‘__pyx_f_5ampal_8geometry__dot_product_2d’ defined but not used [-Wunused-function] 2023-12-14T06:43:35,287 6448 | static double __pyx_f_5ampal_8geometry__dot_product_2d(double *__pyx_v_a, double *__pyx_v_b) { 2023-12-14T06:43:35,287 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-12-14T06:44:54,859 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/ampal/geometry.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/ampal/geometry.cpython-39-arm-linux-gnueabihf.so 2023-12-14T06:44:55,100 installing to build/bdist.linux-armv7l/wheel 2023-12-14T06:44:55,101 running install 2023-12-14T06:44:55,126 running install_lib 2023-12-14T06:44:55,131 creating build/bdist.linux-armv7l 2023-12-14T06:44:55,132 creating build/bdist.linux-armv7l/wheel 2023-12-14T06:44:55,133 creating build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,134 copying build/lib.linux-armv7l-cpython-39/ampal/ampal_warnings.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,136 copying build/lib.linux-armv7l-cpython-39/ampal/interactions.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,139 copying build/lib.linux-armv7l-cpython-39/ampal/dssp.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,141 copying build/lib.linux-armv7l-cpython-39/ampal/geometry.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,192 copying build/lib.linux-armv7l-cpython-39/ampal/align.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,195 copying build/lib.linux-armv7l-cpython-39/ampal/geometry.pyx -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,198 copying build/lib.linux-armv7l-cpython-39/ampal/ligands.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,200 copying build/lib.linux-armv7l-cpython-39/ampal/data.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,202 copying build/lib.linux-armv7l-cpython-39/ampal/__init__.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,204 creating build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-12-14T06:44:55,205 copying build/lib.linux-armv7l-cpython-39/ampal/datafiles/amino_acids.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-12-14T06:44:55,209 copying build/lib.linux-armv7l-cpython-39/ampal/datafiles/pdb_atom_column_format.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-12-14T06:44:55,213 copying build/lib.linux-armv7l-cpython-39/ampal/datafiles/chemical_elements.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2023-12-14T06:44:55,216 copying build/lib.linux-armv7l-cpython-39/ampal/analyse_protein.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,219 copying build/lib.linux-armv7l-cpython-39/ampal/pseudo_atoms.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,221 copying build/lib.linux-armv7l-cpython-39/ampal/nucleic_acid.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,223 copying build/lib.linux-armv7l-cpython-39/ampal/base_ampal.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,226 copying build/lib.linux-armv7l-cpython-39/ampal/assembly.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,228 copying build/lib.linux-armv7l-cpython-39/ampal/pdb_parser.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,231 copying build/lib.linux-armv7l-cpython-39/ampal/amino_acids.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,233 copying build/lib.linux-armv7l-cpython-39/ampal/geometry.c -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,266 copying build/lib.linux-armv7l-cpython-39/ampal/naccess.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,268 copying build/lib.linux-armv7l-cpython-39/ampal/protein.py -> build/bdist.linux-armv7l/wheel/ampal 2023-12-14T06:44:55,270 running install_egg_info 2023-12-14T06:44:55,275 Copying src/AMPAL.egg-info to build/bdist.linux-armv7l/wheel/AMPAL-1.5.1-py3.9.egg-info 2023-12-14T06:44:55,288 running install_scripts 2023-12-14T06:44:55,335 creating build/bdist.linux-armv7l/wheel/AMPAL-1.5.1.dist-info/WHEEL 2023-12-14T06:44:55,338 creating '/tmp/pip-wheel-tjeaa6a_/.tmp-7gfgz2l2/AMPAL-1.5.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-14T06:44:55,342 adding 'ampal/__init__.py' 2023-12-14T06:44:55,343 adding 'ampal/align.py' 2023-12-14T06:44:55,346 adding 'ampal/amino_acids.py' 2023-12-14T06:44:55,347 adding 'ampal/ampal_warnings.py' 2023-12-14T06:44:55,351 adding 'ampal/analyse_protein.py' 2023-12-14T06:44:55,353 adding 'ampal/assembly.py' 2023-12-14T06:44:55,357 adding 'ampal/base_ampal.py' 2023-12-14T06:44:55,358 adding 'ampal/data.py' 2023-12-14T06:44:55,360 adding 'ampal/dssp.py' 2023-12-14T06:44:55,492 adding 'ampal/geometry.c' 2023-12-14T06:44:56,003 adding 'ampal/geometry.cpython-39-arm-linux-gnueabihf.so' 2023-12-14T06:44:56,026 adding 'ampal/geometry.pyx' 2023-12-14T06:44:56,028 adding 'ampal/interactions.py' 2023-12-14T06:44:56,029 adding 'ampal/ligands.py' 2023-12-14T06:44:56,031 adding 'ampal/naccess.py' 2023-12-14T06:44:56,032 adding 'ampal/nucleic_acid.py' 2023-12-14T06:44:56,035 adding 'ampal/pdb_parser.py' 2023-12-14T06:44:56,039 adding 'ampal/protein.py' 2023-12-14T06:44:56,041 adding 'ampal/pseudo_atoms.py' 2023-12-14T06:44:56,049 adding 'ampal/datafiles/amino_acids.json' 2023-12-14T06:44:56,054 adding 'ampal/datafiles/chemical_elements.json' 2023-12-14T06:44:56,071 adding 'ampal/datafiles/pdb_atom_column_format.json' 2023-12-14T06:44:56,073 adding 'AMPAL-1.5.1.dist-info/LICENSE' 2023-12-14T06:44:56,074 adding 'AMPAL-1.5.1.dist-info/METADATA' 2023-12-14T06:44:56,075 adding 'AMPAL-1.5.1.dist-info/WHEEL' 2023-12-14T06:44:56,076 adding 'AMPAL-1.5.1.dist-info/top_level.txt' 2023-12-14T06:44:56,077 adding 'AMPAL-1.5.1.dist-info/RECORD' 2023-12-14T06:44:56,094 removing build/bdist.linux-armv7l/wheel 2023-12-14T06:44:56,248 Building wheel for ampal (pyproject.toml): finished with status 'done' 2023-12-14T06:44:56,280 Created wheel for ampal: filename=AMPAL-1.5.1-cp39-cp39-linux_armv7l.whl size=1302050 sha256=308c2269e72e03f6d10ba52bc77726d210007f90293fac278119389202a71d19 2023-12-14T06:44:56,281 Stored in directory: /tmp/pip-ephem-wheel-cache-fmevbzou/wheels/6a/aa/55/ea0c246c24cd4ae1c578aa6ea984bbb2d81f18c4624bb05584 2023-12-14T06:44:56,293 Successfully built ampal 2023-12-14T06:44:56,328 Removed build tracker: '/tmp/pip-build-tracker-9xyhbuxh'