2023-12-18T10:10:57,523 Created temporary directory: /tmp/pip-build-tracker-5z_hin_q 2023-12-18T10:10:57,524 Initialized build tracking at /tmp/pip-build-tracker-5z_hin_q 2023-12-18T10:10:57,524 Created build tracker: /tmp/pip-build-tracker-5z_hin_q 2023-12-18T10:10:57,525 Entered build tracker: /tmp/pip-build-tracker-5z_hin_q 2023-12-18T10:10:57,526 Created temporary directory: /tmp/pip-wheel-tailss1l 2023-12-18T10:10:57,529 Created temporary directory: /tmp/pip-ephem-wheel-cache-jdjq0sol 2023-12-18T10:10:57,552 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-18T10:10:57,555 2 location(s) to search for versions of mdapy: 2023-12-18T10:10:57,555 * https://pypi.org/simple/mdapy/ 2023-12-18T10:10:57,555 * https://www.piwheels.org/simple/mdapy/ 2023-12-18T10:10:57,556 Fetching project page and analyzing links: https://pypi.org/simple/mdapy/ 2023-12-18T10:10:57,556 Getting page https://pypi.org/simple/mdapy/ 2023-12-18T10:10:57,558 Found index url https://pypi.org/simple/ 2023-12-18T10:10:57,795 Fetched page https://pypi.org/simple/mdapy/ as application/vnd.pypi.simple.v1+json 2023-12-18T10:10:57,855 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f8/b3/fa3165f5371bf25f330d582412ce6111d81d16e1068c6a52fff3aeed48fd/mdapy-0.7.6-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,856 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/af/78/2606a229dc0aeee9d63eecc4aaa6768aa4d2bb0a78564e452d46b970a43a/mdapy-0.7.6-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,857 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/73/6a/640a3d6e6e3c97d06a1bf73d2b6904c3a7f1b1a9c11de29ae1e0476fe7c6/mdapy-0.7.6-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,857 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/66/fc/4d83046add95582345104742c12fb8e2a6b3a8968732fe31c8579f5a97ef/mdapy-0.7.6-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,858 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/07/5c/7a729f1a535afa699f6dfb3b0397896298f5657a64b71084398cf6cfdc49/mdapy-0.7.6-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,859 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/d5/75/b981c88ef7545d76c6319a483c42086b789bf60aa8ee28eb0607f5f8b154/mdapy-0.7.6-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,859 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/ce/f4/0990d772c757a937e56751013af5908d37cff6ecb567d08ce583492c9d1b/mdapy-0.7.6-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,860 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/42/e6/0e929a981723be23cf81fcc63c7b3c01ca77c8922750a4cbbbb83e267c79/mdapy-0.7.6-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,861 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/14/2c/f0eb260b52cfb221f26d5c334067e6d40e62ee530257b26202bc6db7d1a5/mdapy-0.7.7-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,861 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/34/8a/93cd6fbd746a8c595d4af152a3dbcf030e6d28659886cd07a4b2f1e8e1c2/mdapy-0.7.7-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,862 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/bc/ad/c7c9bdfaa2b1fdb0053910f21cf3f7ff576a2880a6d6c17767ea9232faa3/mdapy-0.7.7-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,862 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f3/bf/9be55b37f2e836515bc7f1b8e9668dc5e2fd023cb79656647fbed4d1f1be/mdapy-0.7.7-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,863 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/8b/a9/45c25f4ab8b7ab05ec032f1dfa62c1d7804fa146c2b212b4daf059ddc6a2/mdapy-0.7.7-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,864 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/fb/54/c2934735ce4f6ea9518a1a247ffe136ce0c332794680f5fa0ea102efe3f6/mdapy-0.7.7-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,864 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/98/a0/c93988cb06071f1bffd1456c70ff7d4c44097118770f0b48ff6258eb2e70/mdapy-0.7.7-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,865 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/63/57/d03d7cc497f604328eebe8969f74599617857dd3d2ab3625273b1c7186de/mdapy-0.7.7-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7) 2023-12-18T10:10:57,865 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/6d/8c/4139c161385c8f21777eb003899d40ca9da4223cc323930d278703c99d7c/mdapy-0.7.8-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,866 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/47/83/350174a1238e5d982e7d5a58966ffb1b142fb1c65d15359d8b58b3455b7a/mdapy-0.7.8-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,867 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/52/f6/c3fe6f103679c6ad7285525645c4bf14ae435a289b08a3830b374a81cecf/mdapy-0.7.8-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,867 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/b2/50/dbac02eb7159c6e96f0d5bbb97ae538f52fc7ec25423e600caa81aeab089/mdapy-0.7.8-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,868 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/27/48/dc4cb441bf2e06da3eecfaa9b13554f8a6282312c842f271b6bf3059e331/mdapy-0.7.8-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,869 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/14/24/39fced0a574be250cfeb26e75acf14336ffb3481dc072b7eb6afcf8ad699/mdapy-0.7.8-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,869 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f6/ea/8e024914da8f894f8d5ab36f8ff5a1e6eadbd92fdc38210b84ae7e2f17ce/mdapy-0.7.8-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,870 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/2e/f7/f4a7060466bc8fa883d1228fca3f4feef9b4c1709d2f9f8211e5268d8a10/mdapy-0.7.8-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,870 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/e0/da/f6c45682567bb4ad304ba49d204bc5ddeba01492a0a019f66b3f369e3bfc/mdapy-0.7.9-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,871 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/09/bc/81f2af61d79dd67d9b7f0c6943ebb540637e3d9976395e102d98c67b2c3a/mdapy-0.7.9-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,872 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/64/37/535f581360ef0de48cfffd4b513b2aa8f0614c98cbe5feef87a5f3930bd8/mdapy-0.7.9-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,872 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f9/b2/72561dbdc5fa58ef0d747248bd751325b02c8d4c7baa1519bd09d57bbc8e/mdapy-0.7.9-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,873 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/13/4e/be694bee4fffcd3f5600fd814b608c09e61b3c46a13fc84d4c521f6e6d1e/mdapy-0.7.9-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,873 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/41/d8/817cc28ba5a64d9a1b521ef81d4111a989d0e53bf4cc8ec13dd96ee8f161/mdapy-0.7.9-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,874 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/cf/40/508593c043867dd44cce50205b0655c5ee126e7e3970c9d3253977ab12ac/mdapy-0.7.9-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,874 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/bd/0e/9e3f7b468657d407e2653ba96fc2bcd2e856b44f11f3d06c9700f505f7c7/mdapy-0.7.9-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.7,<3.11) 2023-12-18T10:10:57,875 Skipping link: No binaries permitted for mdapy: 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https://files.pythonhosted.org/packages/3b/3b/f2d34c38530949d911cad9b77fce6d0a3f560625f7f6dd42c535b5c0639f/mdapy-0.10.0-cp38-cp38-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,043 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/eb/a9/a985dc1d7a73966353ad5f9624f1c0f042cd31d50313995c25250b18edb8/mdapy-0.10.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,043 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/8b/95/cb8ebf762b68c2d8f0e338f213f39f7fded3a0e5d3e93539da4bc82cb0a2/mdapy-0.10.0-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,044 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/95/35/488f1a2ca79bd78be1a2344864c8f679a8460c49b2ce795020ef368163cf/mdapy-0.10.0-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,044 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/92/43/465a224d416728911326becb09fb2a9e4b19ed6092231b2af587fe300c40/mdapy-0.10.0-cp39-cp39-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,045 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/41/c0/fca1f7debe06923ba4fe08817a7495a7b5d353248712f479034610833075/mdapy-0.10.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,046 Found link https://files.pythonhosted.org/packages/4a/0a/777c0074a7028fbca1149e677587a82f6c0b38180f0a47470a8177ebccfa/mdapy-0.10.0.tar.gz (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12), version: 0.10.0 2023-12-18T10:10:58,047 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/11/00/96808dd125142d8e57bd743a01cbaec0e7e5fe919ca90c26dacf104e3583/mdapy-0.10.1-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,048 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/ac/98/25550f54b1b0c69129fa9a7c6a91503d34c471f3aaa96eacfcdc99cc9aa0/mdapy-0.10.1-cp310-cp310-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,048 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/88/83/cb0cf218eadefac49ac6021a9d8f8275bc6d344775e4411178752c35831e/mdapy-0.10.1-cp310-cp310-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,049 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/b5/1a/48ccce2288ac129c3d67882f416bfddb653d3585b27656f056d3503dfeb6/mdapy-0.10.1-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,050 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/02/1f/f21ca26eb1c6e3e63e9a552be735a4cd49d4d0572fa5e13bb0bf83bfa5c4/mdapy-0.10.1-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,050 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/f5/8f/3b0287a78b779f9146ddab932e1a43c5a645a3e09954b8ca112a84c1142e/mdapy-0.10.1-cp311-cp311-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,051 Skipping link: No binaries permitted for mdapy: 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https://files.pythonhosted.org/packages/ce/3a/bd178a87e639215d142380219d6262df6d4501a22fd334dce95e15687294/mdapy-0.10.1-cp38-cp38-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,053 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/b4/d3/4b1d1bf31fa60f3b64be1051007ae0968541ba25b65ba9ee7fb4a258e2eb/mdapy-0.10.1-cp38-cp38-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,053 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/c3/0a/a431c889c7eeaea326bb9d726e01b9a6a02aea7b1c73d1f7eef9c81b28a5/mdapy-0.10.1-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,054 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/54/94/2f22e225ee161ef763cb2fb5818fbd425a41471e3a3d6f0309cb4f6d7433/mdapy-0.10.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,054 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/61/ff/a025fd5983341693f1d1463b8cd00e05069978ba3b207351201eaf550962/mdapy-0.10.1-cp39-cp39-manylinux1_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,055 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/0b/e6/8b0d9c71d0c4b19c064dcf5ef7186a5f0fd0517230b6a72246b5c55d1cec/mdapy-0.10.1-cp39-cp39-manylinux_2_35_x86_64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,056 Skipping link: No binaries permitted for mdapy: https://files.pythonhosted.org/packages/3a/80/4199e419bebb555646233aae3163ce440189d70fdbea3d5f1cd6261d70cb/mdapy-0.10.1-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,057 Found link https://files.pythonhosted.org/packages/b3/3a/abeff5f88d416dbe617a5e9b591ba536f131722511c852734408ca4a1c02/mdapy-0.10.1.tar.gz (from https://pypi.org/simple/mdapy/) (requires-python:>=3.8,<3.12), version: 0.10.1 2023-12-18T10:10:58,058 Fetching project page and analyzing links: https://www.piwheels.org/simple/mdapy/ 2023-12-18T10:10:58,059 Getting page https://www.piwheels.org/simple/mdapy/ 2023-12-18T10:10:58,060 Found index url https://www.piwheels.org/simple/ 2023-12-18T10:10:58,210 Fetched page https://www.piwheels.org/simple/mdapy/ as text/html 2023-12-18T10:10:58,221 Skipping link: No binaries permitted for mdapy: 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https://www.piwheels.org/simple/mdapy/mdapy-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=66dfe86b09862b2a244119be790fe588da000a82d6e9a7a4a517d68d3d52621b (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,237 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.3-cp311-cp311-linux_armv6l.whl#sha256=8cb78787290c397b9dfece2e2dea33932dbd7f8bfc25102ffb19d3cfc3e8a21b (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,237 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.3-cp311-cp311-linux_armv7l.whl#sha256=8cb78787290c397b9dfece2e2dea33932dbd7f8bfc25102ffb19d3cfc3e8a21b (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,238 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=60b547ad8a094bed5c30220348077063f31aa610cd786220c201b113ce3bcce7 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,238 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=60b547ad8a094bed5c30220348077063f31aa610cd786220c201b113ce3bcce7 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,239 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.2-cp311-cp311-linux_armv6l.whl#sha256=3b806283528bd30dd065430bcac469fdfa9e9c3c51b68bdae3dd21bd50b224e7 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,240 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.2-cp311-cp311-linux_armv7l.whl#sha256=3b806283528bd30dd065430bcac469fdfa9e9c3c51b68bdae3dd21bd50b224e7 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,240 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=bdfb377dcc2463dc346ce1b63cfcf791a2ebfb039812edd97171e427316fab54 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,241 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=bdfb377dcc2463dc346ce1b63cfcf791a2ebfb039812edd97171e427316fab54 (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,241 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.1-cp311-cp311-linux_armv6l.whl#sha256=4a614bb384e0b45f19f4a1b65ea1bab28abda3e4b1fa3cba4c7160385983f16e (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,242 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.1-cp311-cp311-linux_armv7l.whl#sha256=4a614bb384e0b45f19f4a1b65ea1bab28abda3e4b1fa3cba4c7160385983f16e (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,242 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=1f00cd684879a3b96744cdb2afedbc5fbca471c4329dd972df12eda72573861d (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,243 Skipping link: No binaries permitted for mdapy: https://www.piwheels.org/simple/mdapy/mdapy-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=1f00cd684879a3b96744cdb2afedbc5fbca471c4329dd972df12eda72573861d (from https://www.piwheels.org/simple/mdapy/) (requires-python:>=3.8,<3.12) 2023-12-18T10:10:58,244 Skipping link: not a file: https://www.piwheels.org/simple/mdapy/ 2023-12-18T10:10:58,245 Skipping link: not a file: https://pypi.org/simple/mdapy/ 2023-12-18T10:10:58,264 Given no hashes to check 1 links for project 'mdapy': discarding no candidates 2023-12-18T10:10:58,282 Collecting mdapy==0.10.1 2023-12-18T10:10:58,285 Created temporary directory: /tmp/pip-unpack-9zkgy4yh 2023-12-18T10:10:58,497 Downloading mdapy-0.10.1.tar.gz (4.1 MB) 2023-12-18T10:10:59,804 Added mdapy==0.10.1 from https://files.pythonhosted.org/packages/b3/3a/abeff5f88d416dbe617a5e9b591ba536f131722511c852734408ca4a1c02/mdapy-0.10.1.tar.gz to build tracker '/tmp/pip-build-tracker-5z_hin_q' 2023-12-18T10:10:59,813 Created temporary directory: /tmp/pip-build-env-bagfoufr 2023-12-18T10:10:59,820 Installing build dependencies: started 2023-12-18T10:10:59,822 Running command pip subprocess to install build dependencies 2023-12-18T10:11:01,004 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-12-18T10:11:01,526 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-18T10:11:02,953 Collecting setuptools 2023-12-18T10:11:02,978 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.2-py3-none-any.whl (819 kB) 2023-12-18T10:11:03,201 Collecting wheel 2023-12-18T10:11:03,215 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2023-12-18T10:11:03,376 Collecting pybind11 2023-12-18T10:11:03,391 Using cached https://www.piwheels.org/simple/pybind11/pybind11-2.11.1-py3-none-any.whl (227 kB) 2023-12-18T10:11:06,020 Installing collected packages: wheel, setuptools, pybind11 2023-12-18T10:11:06,258 Creating /tmp/pip-build-env-bagfoufr/overlay/local/bin 2023-12-18T10:11:06,260 changing mode of /tmp/pip-build-env-bagfoufr/overlay/local/bin/wheel to 755 2023-12-18T10:11:08,617 changing mode of /tmp/pip-build-env-bagfoufr/overlay/local/bin/pybind11-config to 755 2023-12-18T10:11:08,639 Successfully installed pybind11-2.11.1 setuptools-69.0.2 wheel-0.42.0 2023-12-18T10:11:09,234 Installing build dependencies: finished with status 'done' 2023-12-18T10:11:09,237 Getting requirements to build wheel: started 2023-12-18T10:11:09,238 Running command Getting requirements to build wheel 2023-12-18T10:11:09,773 /tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-12-18T10:11:09,773 corresp(dist, value, root_dir) 2023-12-18T10:11:10,052 running egg_info 2023-12-18T10:11:10,057 writing mdapy.egg-info/PKG-INFO 2023-12-18T10:11:10,062 writing dependency_links to mdapy.egg-info/dependency_links.txt 2023-12-18T10:11:10,064 writing entry points to mdapy.egg-info/entry_points.txt 2023-12-18T10:11:10,067 writing requirements to mdapy.egg-info/requires.txt 2023-12-18T10:11:10,068 writing top-level names to mdapy.egg-info/top_level.txt 2023-12-18T10:11:10,089 reading manifest file 'mdapy.egg-info/SOURCES.txt' 2023-12-18T10:11:10,106 adding license file 'LICENSE' 2023-12-18T10:11:10,112 writing manifest file 'mdapy.egg-info/SOURCES.txt' 2023-12-18T10:11:10,231 Getting requirements to build wheel: finished with status 'done' 2023-12-18T10:11:10,240 Created temporary directory: /tmp/pip-modern-metadata-c0qexdpo 2023-12-18T10:11:10,242 Preparing metadata (pyproject.toml): started 2023-12-18T10:11:10,243 Running command Preparing metadata (pyproject.toml) 2023-12-18T10:11:10,741 /tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-12-18T10:11:10,741 corresp(dist, value, root_dir) 2023-12-18T10:11:11,010 running dist_info 2023-12-18T10:11:11,016 creating /tmp/pip-modern-metadata-c0qexdpo/mdapy.egg-info 2023-12-18T10:11:11,020 writing /tmp/pip-modern-metadata-c0qexdpo/mdapy.egg-info/PKG-INFO 2023-12-18T10:11:11,026 writing dependency_links to /tmp/pip-modern-metadata-c0qexdpo/mdapy.egg-info/dependency_links.txt 2023-12-18T10:11:11,028 writing entry points to /tmp/pip-modern-metadata-c0qexdpo/mdapy.egg-info/entry_points.txt 2023-12-18T10:11:11,030 writing requirements to /tmp/pip-modern-metadata-c0qexdpo/mdapy.egg-info/requires.txt 2023-12-18T10:11:11,031 writing top-level names to /tmp/pip-modern-metadata-c0qexdpo/mdapy.egg-info/top_level.txt 2023-12-18T10:11:11,032 writing manifest file '/tmp/pip-modern-metadata-c0qexdpo/mdapy.egg-info/SOURCES.txt' 2023-12-18T10:11:11,048 reading manifest file '/tmp/pip-modern-metadata-c0qexdpo/mdapy.egg-info/SOURCES.txt' 2023-12-18T10:11:11,051 adding license file 'LICENSE' 2023-12-18T10:11:11,054 writing manifest file '/tmp/pip-modern-metadata-c0qexdpo/mdapy.egg-info/SOURCES.txt' 2023-12-18T10:11:11,055 creating '/tmp/pip-modern-metadata-c0qexdpo/mdapy-0.10.1.dist-info' 2023-12-18T10:11:11,207 Preparing metadata (pyproject.toml): finished with status 'done' 2023-12-18T10:11:11,212 Source in /tmp/pip-wheel-tailss1l/mdapy_d6f279e6de64425088e66878c434a8ad has version 0.10.1, which satisfies requirement mdapy==0.10.1 from https://files.pythonhosted.org/packages/b3/3a/abeff5f88d416dbe617a5e9b591ba536f131722511c852734408ca4a1c02/mdapy-0.10.1.tar.gz 2023-12-18T10:11:11,212 Removed mdapy==0.10.1 from https://files.pythonhosted.org/packages/b3/3a/abeff5f88d416dbe617a5e9b591ba536f131722511c852734408ca4a1c02/mdapy-0.10.1.tar.gz from build tracker '/tmp/pip-build-tracker-5z_hin_q' 2023-12-18T10:11:11,219 Created temporary directory: /tmp/pip-unpack-nvx4y1zu 2023-12-18T10:11:11,220 Created temporary directory: /tmp/pip-unpack-trd5m40g 2023-12-18T10:11:11,245 Building wheels for collected packages: mdapy 2023-12-18T10:11:11,249 Created temporary directory: /tmp/pip-wheel-3582q9_p 2023-12-18T10:11:11,249 Destination directory: /tmp/pip-wheel-3582q9_p 2023-12-18T10:11:11,252 Building wheel for mdapy (pyproject.toml): started 2023-12-18T10:11:11,253 Running command Building wheel for mdapy (pyproject.toml) 2023-12-18T10:11:11,741 /tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2023-12-18T10:11:11,741 corresp(dist, value, root_dir) 2023-12-18T10:11:11,999 running bdist_wheel 2023-12-18T10:11:12,013 running build 2023-12-18T10:11:12,014 running build_py 2023-12-18T10:11:12,019 creating build 2023-12-18T10:11:12,020 creating build/lib.linux-armv7l-cpython-311 2023-12-18T10:11:12,020 creating build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,022 copying mdapy/polyhedral_template_matching.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,024 copying mdapy/tool_function.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,026 copying mdapy/potential.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,029 copying mdapy/warren_cowley_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,031 copying mdapy/centro_symmetry_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,033 copying mdapy/main.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,036 copying mdapy/void_distribution.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,039 copying mdapy/neighbor.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,041 copying mdapy/visualize.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,043 copying mdapy/pair_distribution.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,045 copying mdapy/common_neighbor_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,047 copying mdapy/__init__.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,049 copying mdapy/ackland_jones_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,051 copying mdapy/entropy.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,053 copying mdapy/steinhardt_bond_orientation.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,056 copying mdapy/voronoi_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,058 copying mdapy/eam_generate.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,060 copying mdapy/eam_average.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,062 copying mdapy/plotset.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,064 copying mdapy/timer.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,066 copying mdapy/lattice_maker.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,068 copying mdapy/calculator.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,070 copying mdapy/replicate.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,072 copying mdapy/lindemann_parameter.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,074 copying mdapy/spatial_binning.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,076 copying mdapy/common_neighbor_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,079 copying mdapy/load_save_data.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,081 copying mdapy/identify_SFs_TBs.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,083 copying mdapy/pigz.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,086 copying mdapy/mean_squared_displacement.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,088 copying mdapy/temperature.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,090 copying mdapy/cluser_analysis.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,092 copying mdapy/create_polycrystalline.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,095 copying mdapy/__main__.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,096 copying mdapy/nearest_neighbor.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,098 copying mdapy/system.py -> build/lib.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,102 running egg_info 2023-12-18T10:11:12,105 writing mdapy.egg-info/PKG-INFO 2023-12-18T10:11:12,110 writing dependency_links to mdapy.egg-info/dependency_links.txt 2023-12-18T10:11:12,112 writing entry points to mdapy.egg-info/entry_points.txt 2023-12-18T10:11:12,114 writing requirements to mdapy.egg-info/requires.txt 2023-12-18T10:11:12,116 writing top-level names to mdapy.egg-info/top_level.txt 2023-12-18T10:11:12,125 reading manifest file 'mdapy.egg-info/SOURCES.txt' 2023-12-18T10:11:12,131 adding license file 'LICENSE' 2023-12-18T10:11:12,138 writing manifest file 'mdapy.egg-info/SOURCES.txt' 2023-12-18T10:11:12,142 /tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'mdapy.cluster' is absent from the `packages` configuration. 2023-12-18T10:11:12,143 !! 2023-12-18T10:11:12,144 ******************************************************************************** 2023-12-18T10:11:12,145 ############################ 2023-12-18T10:11:12,145 # Package would be ignored # 2023-12-18T10:11:12,146 ############################ 2023-12-18T10:11:12,147 Python recognizes 'mdapy.cluster' as an importable package[^1], 2023-12-18T10:11:12,147 but it is absent from setuptools' `packages` configuration. 2023-12-18T10:11:12,149 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-18T10:11:12,149 package, please make sure that 'mdapy.cluster' is explicitly added 2023-12-18T10:11:12,150 to the `packages` configuration field. 2023-12-18T10:11:12,151 Alternatively, you can also rely on setuptools' discovery methods 2023-12-18T10:11:12,151 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-18T10:11:12,152 instead of `find_packages(...)`/`find:`). 2023-12-18T10:11:12,152 You can read more about "package discovery" on setuptools documentation page: 2023-12-18T10:11:12,153 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-18T10:11:12,154 If you don't want 'mdapy.cluster' to be distributed and are 2023-12-18T10:11:12,154 already explicitly excluding 'mdapy.cluster' via 2023-12-18T10:11:12,155 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-18T10:11:12,155 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-18T10:11:12,155 combination with a more fine grained `package-data` configuration. 2023-12-18T10:11:12,156 You can read more about "package data files" on setuptools documentation page: 2023-12-18T10:11:12,157 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-18T10:11:12,159 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-18T10:11:12,159 even if it does not contain any `.py` files. 2023-12-18T10:11:12,160 On the other hand, currently there is no concept of package data 2023-12-18T10:11:12,160 directory, all directories are treated like packages. 2023-12-18T10:11:12,160 ******************************************************************************** 2023-12-18T10:11:12,161 !! 2023-12-18T10:11:12,162 check.warn(importable) 2023-12-18T10:11:12,162 /tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'mdapy.neigh' is absent from the `packages` configuration. 2023-12-18T10:11:12,163 !! 2023-12-18T10:11:12,164 ******************************************************************************** 2023-12-18T10:11:12,164 ############################ 2023-12-18T10:11:12,165 # Package would be ignored # 2023-12-18T10:11:12,165 ############################ 2023-12-18T10:11:12,166 Python recognizes 'mdapy.neigh' as an importable package[^1], 2023-12-18T10:11:12,166 but it is absent from setuptools' `packages` configuration. 2023-12-18T10:11:12,168 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-18T10:11:12,168 package, please make sure that 'mdapy.neigh' is explicitly added 2023-12-18T10:11:12,169 to the `packages` configuration field. 2023-12-18T10:11:12,170 Alternatively, you can also rely on setuptools' discovery methods 2023-12-18T10:11:12,170 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-18T10:11:12,171 instead of `find_packages(...)`/`find:`). 2023-12-18T10:11:12,172 You can read more about "package discovery" on setuptools documentation page: 2023-12-18T10:11:12,173 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-18T10:11:12,174 If you don't want 'mdapy.neigh' to be distributed and are 2023-12-18T10:11:12,174 already explicitly excluding 'mdapy.neigh' via 2023-12-18T10:11:12,175 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-18T10:11:12,176 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-18T10:11:12,176 combination with a more fine grained `package-data` configuration. 2023-12-18T10:11:12,177 You can read more about "package data files" on setuptools documentation page: 2023-12-18T10:11:12,178 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-18T10:11:12,180 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-18T10:11:12,180 even if it does not contain any `.py` files. 2023-12-18T10:11:12,181 On the other hand, currently there is no concept of package data 2023-12-18T10:11:12,181 directory, all directories are treated like packages. 2023-12-18T10:11:12,181 ******************************************************************************** 2023-12-18T10:11:12,182 !! 2023-12-18T10:11:12,183 check.warn(importable) 2023-12-18T10:11:12,183 /tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'mdapy.ptm' is absent from the `packages` configuration. 2023-12-18T10:11:12,184 !! 2023-12-18T10:11:12,184 ******************************************************************************** 2023-12-18T10:11:12,185 ############################ 2023-12-18T10:11:12,185 # Package would be ignored # 2023-12-18T10:11:12,186 ############################ 2023-12-18T10:11:12,186 Python recognizes 'mdapy.ptm' as an importable package[^1], 2023-12-18T10:11:12,186 but it is absent from setuptools' `packages` configuration. 2023-12-18T10:11:12,187 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-18T10:11:12,188 package, please make sure that 'mdapy.ptm' is explicitly added 2023-12-18T10:11:12,188 to the `packages` configuration field. 2023-12-18T10:11:12,189 Alternatively, you can also rely on setuptools' discovery methods 2023-12-18T10:11:12,190 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-18T10:11:12,190 instead of `find_packages(...)`/`find:`). 2023-12-18T10:11:12,191 You can read more about "package discovery" on setuptools documentation page: 2023-12-18T10:11:12,195 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-18T10:11:12,197 If you don't want 'mdapy.ptm' to be distributed and are 2023-12-18T10:11:12,198 already explicitly excluding 'mdapy.ptm' via 2023-12-18T10:11:12,198 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-18T10:11:12,198 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-18T10:11:12,199 combination with a more fine grained `package-data` configuration. 2023-12-18T10:11:12,200 You can read more about "package data files" on setuptools documentation page: 2023-12-18T10:11:12,201 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-18T10:11:12,203 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-18T10:11:12,204 even if it does not contain any `.py` files. 2023-12-18T10:11:12,204 On the other hand, currently there is no concept of package data 2023-12-18T10:11:12,205 directory, all directories are treated like packages. 2023-12-18T10:11:12,205 ******************************************************************************** 2023-12-18T10:11:12,206 !! 2023-12-18T10:11:12,207 check.warn(importable) 2023-12-18T10:11:12,208 /tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'mdapy.rdf' is absent from the `packages` configuration. 2023-12-18T10:11:12,208 !! 2023-12-18T10:11:12,210 ******************************************************************************** 2023-12-18T10:11:12,210 ############################ 2023-12-18T10:11:12,211 # Package would be ignored # 2023-12-18T10:11:12,212 ############################ 2023-12-18T10:11:12,212 Python recognizes 'mdapy.rdf' as an importable package[^1], 2023-12-18T10:11:12,213 but it is absent from setuptools' `packages` configuration. 2023-12-18T10:11:12,214 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-18T10:11:12,214 package, please make sure that 'mdapy.rdf' is explicitly added 2023-12-18T10:11:12,215 to the `packages` configuration field. 2023-12-18T10:11:12,216 Alternatively, you can also rely on setuptools' discovery methods 2023-12-18T10:11:12,216 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-18T10:11:12,217 instead of `find_packages(...)`/`find:`). 2023-12-18T10:11:12,218 You can read more about "package discovery" on setuptools documentation page: 2023-12-18T10:11:12,218 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-18T10:11:12,219 If you don't want 'mdapy.rdf' to be distributed and are 2023-12-18T10:11:12,220 already explicitly excluding 'mdapy.rdf' via 2023-12-18T10:11:12,220 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-18T10:11:12,221 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-18T10:11:12,221 combination with a more fine grained `package-data` configuration. 2023-12-18T10:11:12,222 You can read more about "package data files" on setuptools documentation page: 2023-12-18T10:11:12,223 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-18T10:11:12,224 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-18T10:11:12,225 even if it does not contain any `.py` files. 2023-12-18T10:11:12,226 On the other hand, currently there is no concept of package data 2023-12-18T10:11:12,226 directory, all directories are treated like packages. 2023-12-18T10:11:12,227 ******************************************************************************** 2023-12-18T10:11:12,228 !! 2023-12-18T10:11:12,228 check.warn(importable) 2023-12-18T10:11:12,229 /tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'mdapy.voronoi' is absent from the `packages` configuration. 2023-12-18T10:11:12,229 !! 2023-12-18T10:11:12,231 ******************************************************************************** 2023-12-18T10:11:12,231 ############################ 2023-12-18T10:11:12,232 # Package would be ignored # 2023-12-18T10:11:12,233 ############################ 2023-12-18T10:11:12,234 Python recognizes 'mdapy.voronoi' as an importable package[^1], 2023-12-18T10:11:12,234 but it is absent from setuptools' `packages` configuration. 2023-12-18T10:11:12,235 This leads to an ambiguous overall configuration. If you want to distribute this 2023-12-18T10:11:12,236 package, please make sure that 'mdapy.voronoi' is explicitly added 2023-12-18T10:11:12,236 to the `packages` configuration field. 2023-12-18T10:11:12,237 Alternatively, you can also rely on setuptools' discovery methods 2023-12-18T10:11:12,238 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-12-18T10:11:12,238 instead of `find_packages(...)`/`find:`). 2023-12-18T10:11:12,240 You can read more about "package discovery" on setuptools documentation page: 2023-12-18T10:11:12,241 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-12-18T10:11:12,242 If you don't want 'mdapy.voronoi' to be distributed and are 2023-12-18T10:11:12,242 already explicitly excluding 'mdapy.voronoi' via 2023-12-18T10:11:12,243 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-12-18T10:11:12,243 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-12-18T10:11:12,244 combination with a more fine grained `package-data` configuration. 2023-12-18T10:11:12,245 You can read more about "package data files" on setuptools documentation page: 2023-12-18T10:11:12,246 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-12-18T10:11:12,247 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-12-18T10:11:12,248 even if it does not contain any `.py` files. 2023-12-18T10:11:12,248 On the other hand, currently there is no concept of package data 2023-12-18T10:11:12,248 directory, all directories are treated like packages. 2023-12-18T10:11:12,249 ******************************************************************************** 2023-12-18T10:11:12,250 !! 2023-12-18T10:11:12,250 check.warn(importable) 2023-12-18T10:11:12,251 creating build/lib.linux-armv7l-cpython-311/mdapy/cluster 2023-12-18T10:11:12,251 copying mdapy/cluster/_cluster.cpp -> build/lib.linux-armv7l-cpython-311/mdapy/cluster 2023-12-18T10:11:12,252 creating build/lib.linux-armv7l-cpython-311/mdapy/neigh 2023-12-18T10:11:12,252 copying mdapy/neigh/_neigh.cpp -> build/lib.linux-armv7l-cpython-311/mdapy/neigh 2023-12-18T10:11:12,253 creating build/lib.linux-armv7l-cpython-311/mdapy/ptm 2023-12-18T10:11:12,253 copying mdapy/ptm/_ptm.cpp -> build/lib.linux-armv7l-cpython-311/mdapy/ptm 2023-12-18T10:11:12,253 creating build/lib.linux-armv7l-cpython-311/mdapy/rdf 2023-12-18T10:11:12,254 copying mdapy/rdf/_rdf.cpp -> build/lib.linux-armv7l-cpython-311/mdapy/rdf 2023-12-18T10:11:12,254 creating build/lib.linux-armv7l-cpython-311/mdapy/voronoi 2023-12-18T10:11:12,255 copying mdapy/voronoi/_voro.cpp -> build/lib.linux-armv7l-cpython-311/mdapy/voronoi 2023-12-18T10:11:12,255 running build_ext 2023-12-18T10:11:12,256 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c flagcheck.cpp -o flagcheck.o -std=c++17 2023-12-18T10:11:12,322 building '_cluster_analysis' extension 2023-12-18T10:11:12,323 creating build/temp.linux-armv7l-cpython-311 2023-12-18T10:11:12,323 creating build/temp.linux-armv7l-cpython-311/mdapy 2023-12-18T10:11:12,324 creating build/temp.linux-armv7l-cpython-311/mdapy/cluster 2023-12-18T10:11:12,328 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/cluster/_cluster.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/cluster/_cluster.o -std=c++17 -fvisibility=hidden -g0 2023-12-18T10:11:31,472 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/cluster/_cluster.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_cluster_analysis.cpython-311-arm-linux-gnueabihf.so 2023-12-18T10:11:31,720 building '_voronoi_analysis' extension 2023-12-18T10:11:31,721 creating build/temp.linux-armv7l-cpython-311/mdapy/voronoi 2023-12-18T10:11:31,722 creating build/temp.linux-armv7l-cpython-311/thirdparty 2023-12-18T10:11:31,722 creating build/temp.linux-armv7l-cpython-311/thirdparty/voro++ 2023-12-18T10:11:31,726 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/voro++ -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/voronoi/_voro.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/voronoi/_voro.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:11:31,727 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/voro++ -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/voro++/voro++.cc -o build/temp.linux-armv7l-cpython-311/thirdparty/voro++/voro++.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:11:33,042 In file included from thirdparty/voro++/container_2d.cc:10, 2023-12-18T10:11:33,042 from thirdparty/voro++/voro++.cc:10: 2023-12-18T10:11:33,043 thirdparty/voro++/iter_2d.hh:16:49: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,043 16 | class container_base_2d::iterator : public std::iterator { 2023-12-18T10:11:33,044 | ^~~~~~~~ 2023-12-18T10:11:33,045 In file included from /usr/include/c++/12/bits/stl_algobase.h:65, 2023-12-18T10:11:33,045 from /usr/include/c++/12/vector:60, 2023-12-18T10:11:33,046 from thirdparty/voro++/cell_2d.hh:11, 2023-12-18T10:11:33,047 from thirdparty/voro++/cell_2d.cc:7, 2023-12-18T10:11:33,047 from thirdparty/voro++/voro++.cc:7: 2023-12-18T10:11:33,048 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,049 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,049 | ^~~~~~~~ 2023-12-18T10:11:33,050 thirdparty/voro++/iter_2d.hh:21:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,051 21 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,051 | ^~~~~~~~ 2023-12-18T10:11:33,052 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,053 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,054 | ^~~~~~~~ 2023-12-18T10:11:33,055 thirdparty/voro++/iter_2d.hh:22:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,055 22 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,056 | ^~~~~~~~ 2023-12-18T10:11:33,057 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,058 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,059 | ^~~~~~~~ 2023-12-18T10:11:33,059 thirdparty/voro++/iter_2d.hh:23:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,060 23 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,061 | ^~~~~~~~ 2023-12-18T10:11:33,062 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,063 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,063 | ^~~~~~~~ 2023-12-18T10:11:33,065 thirdparty/voro++/iter_2d.hh:153:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,066 153 | class container_base_2d::iterator_subset : public std::iterator { 2023-12-18T10:11:33,067 | ^~~~~~~~ 2023-12-18T10:11:33,068 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,069 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,069 | ^~~~~~~~ 2023-12-18T10:11:33,070 thirdparty/voro++/iter_2d.hh:155:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,070 155 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,071 | ^~~~~~~~ 2023-12-18T10:11:33,072 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,072 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,073 | ^~~~~~~~ 2023-12-18T10:11:33,074 thirdparty/voro++/iter_2d.hh:156:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,074 156 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,075 | ^~~~~~~~ 2023-12-18T10:11:33,075 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,076 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,077 | ^~~~~~~~ 2023-12-18T10:11:33,077 thirdparty/voro++/iter_2d.hh:157:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,078 157 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,079 | ^~~~~~~~ 2023-12-18T10:11:33,080 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,080 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,081 | ^~~~~~~~ 2023-12-18T10:11:33,082 thirdparty/voro++/iter_2d.hh:246:55: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,083 246 | class container_base_2d::iterator_order : public std::iterator { 2023-12-18T10:11:33,084 | ^~~~~~~~ 2023-12-18T10:11:33,084 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,085 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,086 | ^~~~~~~~ 2023-12-18T10:11:33,086 thirdparty/voro++/iter_2d.hh:248:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,087 248 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,088 | ^~~~~~~~ 2023-12-18T10:11:33,089 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,090 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,090 | ^~~~~~~~ 2023-12-18T10:11:33,091 thirdparty/voro++/iter_2d.hh:249:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,092 249 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,093 | ^~~~~~~~ 2023-12-18T10:11:33,094 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,094 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,096 | ^~~~~~~~ 2023-12-18T10:11:33,096 thirdparty/voro++/iter_2d.hh:250:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,097 250 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,098 | ^~~~~~~~ 2023-12-18T10:11:33,098 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,099 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,100 | ^~~~~~~~ 2023-12-18T10:11:33,204 In file included from thirdparty/voro++/container_3d.cc:10, 2023-12-18T10:11:33,204 from thirdparty/voro++/voro++.cc:11: 2023-12-18T10:11:33,205 thirdparty/voro++/iter_3d.hh:17:49: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,206 17 | class container_base_3d::iterator : public std::iterator { 2023-12-18T10:11:33,206 | ^~~~~~~~ 2023-12-18T10:11:33,207 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,208 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,209 | ^~~~~~~~ 2023-12-18T10:11:33,209 thirdparty/voro++/iter_3d.hh:22:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,210 22 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,211 | ^~~~~~~~ 2023-12-18T10:11:33,212 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,213 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,213 | ^~~~~~~~ 2023-12-18T10:11:33,214 thirdparty/voro++/iter_3d.hh:23:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,215 23 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,216 | ^~~~~~~~ 2023-12-18T10:11:33,217 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,217 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,218 | ^~~~~~~~ 2023-12-18T10:11:33,219 thirdparty/voro++/iter_3d.hh:24:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,220 24 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,220 | ^~~~~~~~ 2023-12-18T10:11:33,221 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,222 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,223 | ^~~~~~~~ 2023-12-18T10:11:33,224 thirdparty/voro++/iter_3d.hh:159:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,225 159 | class container_base_3d::iterator_subset : public std::iterator { 2023-12-18T10:11:33,225 | ^~~~~~~~ 2023-12-18T10:11:33,226 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,227 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,227 | ^~~~~~~~ 2023-12-18T10:11:33,228 thirdparty/voro++/iter_3d.hh:161:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,229 161 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,229 | ^~~~~~~~ 2023-12-18T10:11:33,230 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,230 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,231 | ^~~~~~~~ 2023-12-18T10:11:33,232 thirdparty/voro++/iter_3d.hh:162:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,233 162 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,233 | ^~~~~~~~ 2023-12-18T10:11:33,234 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,235 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,235 | ^~~~~~~~ 2023-12-18T10:11:33,236 thirdparty/voro++/iter_3d.hh:163:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,237 163 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,238 | ^~~~~~~~ 2023-12-18T10:11:33,238 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,239 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,240 | ^~~~~~~~ 2023-12-18T10:11:33,241 thirdparty/voro++/iter_3d.hh:252:55: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,242 252 | class container_base_3d::iterator_order : public std::iterator { 2023-12-18T10:11:33,243 | ^~~~~~~~ 2023-12-18T10:11:33,243 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,244 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,245 | ^~~~~~~~ 2023-12-18T10:11:33,246 thirdparty/voro++/iter_3d.hh:254:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,246 254 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,247 | ^~~~~~~~ 2023-12-18T10:11:33,248 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,249 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,250 | ^~~~~~~~ 2023-12-18T10:11:33,251 thirdparty/voro++/iter_3d.hh:255:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,252 255 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,252 | ^~~~~~~~ 2023-12-18T10:11:33,253 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,253 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,254 | ^~~~~~~~ 2023-12-18T10:11:33,255 thirdparty/voro++/iter_3d.hh:256:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,255 256 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,256 | ^~~~~~~~ 2023-12-18T10:11:33,257 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,257 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,258 | ^~~~~~~~ 2023-12-18T10:11:33,259 thirdparty/voro++/iter_3d.hh:365:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,259 365 | class container_triclinic_base::iterator : public std::iterator 2023-12-18T10:11:33,260 | ^~~~~~~~ 2023-12-18T10:11:33,261 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,262 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,263 | ^~~~~~~~ 2023-12-18T10:11:33,263 thirdparty/voro++/iter_3d.hh:378:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,264 378 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,265 | ^~~~~~~~ 2023-12-18T10:11:33,266 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,267 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,268 | ^~~~~~~~ 2023-12-18T10:11:33,269 thirdparty/voro++/iter_3d.hh:379:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,269 379 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,270 | ^~~~~~~~ 2023-12-18T10:11:33,271 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,271 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,272 | ^~~~~~~~ 2023-12-18T10:11:33,273 thirdparty/voro++/iter_3d.hh:380:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,274 380 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,275 | ^~~~~~~~ 2023-12-18T10:11:33,276 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,276 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,277 | ^~~~~~~~ 2023-12-18T10:11:33,278 thirdparty/voro++/iter_3d.hh:450:62: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,278 450 | class container_triclinic_base::iterator_order : public std::iterator 2023-12-18T10:11:33,279 | ^~~~~~~~ 2023-12-18T10:11:33,280 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,280 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,281 | ^~~~~~~~ 2023-12-18T10:11:33,282 thirdparty/voro++/iter_3d.hh:458:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,282 458 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,283 | ^~~~~~~~ 2023-12-18T10:11:33,284 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,284 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,285 | ^~~~~~~~ 2023-12-18T10:11:33,286 thirdparty/voro++/iter_3d.hh:459:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,286 459 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,287 | ^~~~~~~~ 2023-12-18T10:11:33,288 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,288 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,289 | ^~~~~~~~ 2023-12-18T10:11:33,290 thirdparty/voro++/iter_3d.hh:460:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,291 460 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,292 | ^~~~~~~~ 2023-12-18T10:11:33,292 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,293 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,294 | ^~~~~~~~ 2023-12-18T10:11:33,318 In file included from thirdparty/voro++/voro++.hh:337, 2023-12-18T10:11:33,319 from mdapy/voronoi/_voro.cpp:6: 2023-12-18T10:11:33,319 thirdparty/voro++/iter_2d.hh:16:49: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,320 16 | class container_base_2d::iterator : public std::iterator { 2023-12-18T10:11:33,321 | ^~~~~~~~ 2023-12-18T10:11:33,322 In file included from /usr/include/c++/12/bits/stl_algobase.h:65, 2023-12-18T10:11:33,323 from /usr/include/c++/12/vector:60, 2023-12-18T10:11:33,323 from thirdparty/voro++/common.hh:12, 2023-12-18T10:11:33,324 from thirdparty/voro++/voro++.hh:318: 2023-12-18T10:11:33,325 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,326 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,327 | ^~~~~~~~ 2023-12-18T10:11:33,327 thirdparty/voro++/iter_2d.hh:21:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,328 21 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,329 | ^~~~~~~~ 2023-12-18T10:11:33,329 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,330 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,331 | ^~~~~~~~ 2023-12-18T10:11:33,331 thirdparty/voro++/iter_2d.hh:22:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,332 22 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,333 | ^~~~~~~~ 2023-12-18T10:11:33,334 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,334 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,335 | ^~~~~~~~ 2023-12-18T10:11:33,336 thirdparty/voro++/iter_2d.hh:23:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,336 23 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,337 | ^~~~~~~~ 2023-12-18T10:11:33,338 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,339 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,339 | ^~~~~~~~ 2023-12-18T10:11:33,340 thirdparty/voro++/iter_2d.hh:153:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,341 153 | class container_base_2d::iterator_subset : public std::iterator { 2023-12-18T10:11:33,342 | ^~~~~~~~ 2023-12-18T10:11:33,343 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,343 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,344 | ^~~~~~~~ 2023-12-18T10:11:33,345 thirdparty/voro++/iter_2d.hh:155:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,346 155 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,346 | ^~~~~~~~ 2023-12-18T10:11:33,348 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,348 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,349 | ^~~~~~~~ 2023-12-18T10:11:33,350 thirdparty/voro++/iter_2d.hh:156:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,351 156 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,352 | ^~~~~~~~ 2023-12-18T10:11:33,353 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,353 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,354 | ^~~~~~~~ 2023-12-18T10:11:33,355 thirdparty/voro++/iter_2d.hh:157:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,355 157 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,356 | ^~~~~~~~ 2023-12-18T10:11:33,357 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,357 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,358 | ^~~~~~~~ 2023-12-18T10:11:33,359 thirdparty/voro++/iter_2d.hh:246:55: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,359 246 | class container_base_2d::iterator_order : public std::iterator { 2023-12-18T10:11:33,360 | ^~~~~~~~ 2023-12-18T10:11:33,361 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,361 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,362 | ^~~~~~~~ 2023-12-18T10:11:33,363 thirdparty/voro++/iter_2d.hh:248:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,363 248 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,364 | ^~~~~~~~ 2023-12-18T10:11:33,365 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,366 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,367 | ^~~~~~~~ 2023-12-18T10:11:33,367 thirdparty/voro++/iter_2d.hh:249:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,368 249 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,369 | ^~~~~~~~ 2023-12-18T10:11:33,370 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,371 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,371 | ^~~~~~~~ 2023-12-18T10:11:33,372 thirdparty/voro++/iter_2d.hh:250:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,373 250 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,373 | ^~~~~~~~ 2023-12-18T10:11:33,374 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,375 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,376 | ^~~~~~~~ 2023-12-18T10:11:33,377 In file included from thirdparty/voro++/voro++.hh:338: 2023-12-18T10:11:33,377 thirdparty/voro++/iter_3d.hh:17:49: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,378 17 | class container_base_3d::iterator : public std::iterator { 2023-12-18T10:11:33,379 | ^~~~~~~~ 2023-12-18T10:11:33,380 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,381 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,381 | ^~~~~~~~ 2023-12-18T10:11:33,382 thirdparty/voro++/iter_3d.hh:22:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,383 22 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,384 | ^~~~~~~~ 2023-12-18T10:11:33,384 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,385 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,385 | ^~~~~~~~ 2023-12-18T10:11:33,386 thirdparty/voro++/iter_3d.hh:23:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,387 23 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,387 | ^~~~~~~~ 2023-12-18T10:11:33,388 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,389 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,390 | ^~~~~~~~ 2023-12-18T10:11:33,390 thirdparty/voro++/iter_3d.hh:24:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,391 24 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,392 | ^~~~~~~~ 2023-12-18T10:11:33,393 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,394 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,394 | ^~~~~~~~ 2023-12-18T10:11:33,395 thirdparty/voro++/iter_3d.hh:159:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,396 159 | class container_base_3d::iterator_subset : public std::iterator { 2023-12-18T10:11:33,396 | ^~~~~~~~ 2023-12-18T10:11:33,397 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,398 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,399 | ^~~~~~~~ 2023-12-18T10:11:33,399 thirdparty/voro++/iter_3d.hh:161:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,400 161 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,401 | ^~~~~~~~ 2023-12-18T10:11:33,402 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,402 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,403 | ^~~~~~~~ 2023-12-18T10:11:33,404 thirdparty/voro++/iter_3d.hh:162:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,405 162 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,406 | ^~~~~~~~ 2023-12-18T10:11:33,406 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,407 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,408 | ^~~~~~~~ 2023-12-18T10:11:33,408 thirdparty/voro++/iter_3d.hh:163:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,409 163 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,410 | ^~~~~~~~ 2023-12-18T10:11:33,410 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,411 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,412 | ^~~~~~~~ 2023-12-18T10:11:33,413 thirdparty/voro++/iter_3d.hh:252:55: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,413 252 | class container_base_3d::iterator_order : public std::iterator { 2023-12-18T10:11:33,414 | ^~~~~~~~ 2023-12-18T10:11:33,415 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,416 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,416 | ^~~~~~~~ 2023-12-18T10:11:33,417 thirdparty/voro++/iter_3d.hh:254:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,418 254 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,418 | ^~~~~~~~ 2023-12-18T10:11:33,419 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,420 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,421 | ^~~~~~~~ 2023-12-18T10:11:33,421 thirdparty/voro++/iter_3d.hh:255:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,422 255 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,423 | ^~~~~~~~ 2023-12-18T10:11:33,423 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,424 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,425 | ^~~~~~~~ 2023-12-18T10:11:33,426 thirdparty/voro++/iter_3d.hh:256:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,426 256 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,427 | ^~~~~~~~ 2023-12-18T10:11:33,428 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,429 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,430 | ^~~~~~~~ 2023-12-18T10:11:33,430 thirdparty/voro++/iter_3d.hh:365:56: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,431 365 | class container_triclinic_base::iterator : public std::iterator 2023-12-18T10:11:33,431 | ^~~~~~~~ 2023-12-18T10:11:33,432 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,433 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,434 | ^~~~~~~~ 2023-12-18T10:11:33,434 thirdparty/voro++/iter_3d.hh:378:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,435 378 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,436 | ^~~~~~~~ 2023-12-18T10:11:33,436 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,437 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,438 | ^~~~~~~~ 2023-12-18T10:11:33,438 thirdparty/voro++/iter_3d.hh:379:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,439 379 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,440 | ^~~~~~~~ 2023-12-18T10:11:33,440 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,441 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,442 | ^~~~~~~~ 2023-12-18T10:11:33,442 thirdparty/voro++/iter_3d.hh:380:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,443 380 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,444 | ^~~~~~~~ 2023-12-18T10:11:33,445 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,446 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,447 | ^~~~~~~~ 2023-12-18T10:11:33,447 thirdparty/voro++/iter_3d.hh:450:62: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,448 450 | class container_triclinic_base::iterator_order : public std::iterator 2023-12-18T10:11:33,449 | ^~~~~~~~ 2023-12-18T10:11:33,450 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,450 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,451 | ^~~~~~~~ 2023-12-18T10:11:33,452 thirdparty/voro++/iter_3d.hh:458:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,453 458 | typedef typename std::iterator::pointer pointer; 2023-12-18T10:11:33,454 | ^~~~~~~~ 2023-12-18T10:11:33,455 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,455 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,456 | ^~~~~~~~ 2023-12-18T10:11:33,456 thirdparty/voro++/iter_3d.hh:459:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,457 459 | typedef typename std::iterator::reference reference; 2023-12-18T10:11:33,458 | ^~~~~~~~ 2023-12-18T10:11:33,458 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,459 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,460 | ^~~~~~~~ 2023-12-18T10:11:33,460 thirdparty/voro++/iter_3d.hh:460:27: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 2023-12-18T10:11:33,461 460 | typedef typename std::iterator::difference_type difference_type; 2023-12-18T10:11:33,461 | ^~~~~~~~ 2023-12-18T10:11:33,462 /usr/include/c++/12/bits/stl_iterator_base_types.h:127:34: note: declared here 2023-12-18T10:11:33,463 127 | struct _GLIBCXX17_DEPRECATED iterator 2023-12-18T10:11:33,463 | ^~~~~~~~ 2023-12-18T10:11:38,891 mdapy/voronoi/_voro.cpp: In function ‘std::tuple >, std::allocator > > >, std::allocator >, std::allocator > > > > >, std::vector >, std::allocator > > >, std::allocator >, std::allocator > > > > >, std::vector >, std::vector >, std::vector >, std::allocator > > > > get_cell_info(pybind11::array, pybind11::array, pybind11::array, int)’: 2023-12-18T10:11:38,892 mdapy/voronoi/_voro.cpp:114:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2023-12-18T10:11:38,893 114 | while (j < face_index_vector.size()) 2023-12-18T10:11:38,894 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-12-18T10:12:02,841 In file included from /usr/include/c++/12/vector:70: 2023-12-18T10:12:02,842 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2023-12-18T10:12:02,843 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-12-18T10:12:02,843 439 | vector<_Tp, _Alloc>:: 2023-12-18T10:12:02,844 | ^~~~~~~~~~~~~~~~~~~ 2023-12-18T10:12:13,956 In file included from /usr/include/c++/12/vector:64: 2023-12-18T10:12:13,956 In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’, 2023-12-18T10:12:13,957 inlined from ‘void voro::unitcell::images(std::vector&, std::vector&)’ at thirdparty/voro++/unitcell.cc:147:25: 2023-12-18T10:12:13,958 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-12-18T10:12:13,958 1287 | _M_realloc_insert(end(), __x); 2023-12-18T10:12:13,959 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-12-18T10:12:14,414 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/voronoi/_voro.o build/temp.linux-armv7l-cpython-311/thirdparty/voro++/voro++.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_voronoi_analysis.cpython-311-arm-linux-gnueabihf.so -fopenmp 2023-12-18T10:12:14,732 building '_ptm' extension 2023-12-18T10:12:14,732 creating build/temp.linux-armv7l-cpython-311/mdapy/ptm 2023-12-18T10:12:14,733 creating build/temp.linux-armv7l-cpython-311/thirdparty/ptm 2023-12-18T10:12:14,737 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/ptm/_ptm.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/ptm/_ptm.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:14,738 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_alloy_types.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_alloy_types.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:14,739 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_canonical_coloured.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_canonical_coloured.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:14,742 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_constants.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_constants.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:14,845 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_convex_hull_incremental.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_convex_hull_incremental.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:15,663 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_deformation_gradient.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_deformation_gradient.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:16,337 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_graph_data.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_data.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:16,402 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_graph_tools.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_tools.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:16,701 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_index.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_index.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:16,921 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_initialize_data.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_initialize_data.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:17,115 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_neighbour_ordering.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_neighbour_ordering.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:18,011 thirdparty/ptm/ptm_initialize_data.cpp: In function ‘int initialize_graphs(const ptm::refdata_t*, int8_t*)’: 2023-12-18T10:12:18,012 thirdparty/ptm/ptm_initialize_data.cpp:34:21: warning: unused variable ‘_max_degree’ [-Wunused-variable] 2023-12-18T10:12:18,013 34 | int _max_degree = ptm::graph_degree(s->num_facets, s->graphs[i].facets, s->num_nbrs, degree); 2023-12-18T10:12:18,014 | ^~~~~~~~~~~ 2023-12-18T10:12:18,346 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_normalize_vertices.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_normalize_vertices.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:18,384 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_polar.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_polar.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:19,452 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_quat.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_quat.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:20,025 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_structure_matcher.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_structure_matcher.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:20,863 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ithirdparty/ptm -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c thirdparty/ptm/ptm_voronoi_cell.cpp -o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_voronoi_cell.o -std=c++17 -std=c++17 -fvisibility=hidden -g0 -fvisibility=hidden -g0 -fopenmp 2023-12-18T10:12:22,984 mdapy/ptm/_ptm.cpp: In function ‘void get_ptm(char*, double_py, int_py, pybind11::array_t, pybind11::array_t, pybind11::array_t, double, pybind11::array)’: 2023-12-18T10:12:22,985 mdapy/ptm/_ptm.cpp:102:14: warning: variable ‘found’ set but not used [-Wunused-but-set-variable] 2023-12-18T10:12:22,986 102 | bool found = false; 2023-12-18T10:12:22,986 | ^~~~~ 2023-12-18T10:12:25,825 In file included from /usr/include/c++/12/vector:70, 2023-12-18T10:12:25,826 from thirdparty/ptm/ptm_voronoi_cell.h:59, 2023-12-18T10:12:25,827 from thirdparty/ptm/ptm_voronoi_cell.cpp:59: 2023-12-18T10:12:25,828 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2023-12-18T10:12:25,829 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2023-12-18T10:12:25,829 439 | vector<_Tp, _Alloc>:: 2023-12-18T10:12:25,830 | ^~~~~~~~~~~~~~~~~~~ 2023-12-18T10:12:25,899 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2023-12-18T10:12:25,900 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2023-12-18T10:12:25,901 inlined from ‘void ptm_voro::voronoicell_base::face_areas(std::vector&)’ at thirdparty/ptm/ptm_voronoi_cell.cpp:1251:36: 2023-12-18T10:12:25,902 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2023-12-18T10:12:25,903 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2023-12-18T10:12:25,903 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2023-12-18T10:12:37,564 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/ptm/_ptm.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_alloy_types.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_canonical_coloured.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_constants.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_convex_hull_incremental.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_deformation_gradient.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_data.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_graph_tools.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_index.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_initialize_data.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_neighbour_ordering.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_normalize_vertices.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_polar.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_quat.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_structure_matcher.o build/temp.linux-armv7l-cpython-311/thirdparty/ptm/ptm_voronoi_cell.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_ptm.cpython-311-arm-linux-gnueabihf.so -fopenmp 2023-12-18T10:12:37,864 building '_rdf' extension 2023-12-18T10:12:37,865 creating build/temp.linux-armv7l-cpython-311/mdapy/rdf 2023-12-18T10:12:37,868 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/rdf/_rdf.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/rdf/_rdf.o -std=c++17 -fvisibility=hidden -g0 2023-12-18T10:12:56,461 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/rdf/_rdf.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_rdf.cpython-311-arm-linux-gnueabihf.so 2023-12-18T10:12:56,708 building '_neigh' extension 2023-12-18T10:12:56,709 creating build/temp.linux-armv7l-cpython-311/mdapy/neigh 2023-12-18T10:12:56,712 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-bagfoufr/overlay/local/lib/python3.11/dist-packages/pybind11/include -I/usr/include/python3.11 -c mdapy/neigh/_neigh.cpp -o build/temp.linux-armv7l-cpython-311/mdapy/neigh/_neigh.o -std=c++17 -fvisibility=hidden -g0 2023-12-18T10:13:15,425 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/mdapy/neigh/_neigh.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/_neigh.cpython-311-arm-linux-gnueabihf.so 2023-12-18T10:13:15,678 installing to build/bdist.linux-armv7l/wheel 2023-12-18T10:13:15,678 running install 2023-12-18T10:13:15,702 running install_lib 2023-12-18T10:13:15,706 creating build/bdist.linux-armv7l 2023-12-18T10:13:15,707 creating build/bdist.linux-armv7l/wheel 2023-12-18T10:13:15,709 creating build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,710 creating build/bdist.linux-armv7l/wheel/mdapy/rdf 2023-12-18T10:13:15,715 copying build/lib.linux-armv7l-cpython-311/mdapy/rdf/_rdf.cpp -> build/bdist.linux-armv7l/wheel/mdapy/rdf 2023-12-18T10:13:15,717 copying build/lib.linux-armv7l-cpython-311/mdapy/polyhedral_template_matching.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,719 creating build/bdist.linux-armv7l/wheel/mdapy/neigh 2023-12-18T10:13:15,720 copying build/lib.linux-armv7l-cpython-311/mdapy/neigh/_neigh.cpp -> build/bdist.linux-armv7l/wheel/mdapy/neigh 2023-12-18T10:13:15,723 copying build/lib.linux-armv7l-cpython-311/mdapy/tool_function.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,725 copying build/lib.linux-armv7l-cpython-311/mdapy/potential.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,728 copying build/lib.linux-armv7l-cpython-311/mdapy/warren_cowley_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,730 copying build/lib.linux-armv7l-cpython-311/mdapy/centro_symmetry_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,732 copying build/lib.linux-armv7l-cpython-311/mdapy/main.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,736 copying build/lib.linux-armv7l-cpython-311/mdapy/void_distribution.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,738 copying build/lib.linux-armv7l-cpython-311/mdapy/neighbor.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,740 copying build/lib.linux-armv7l-cpython-311/mdapy/visualize.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,742 copying build/lib.linux-armv7l-cpython-311/mdapy/pair_distribution.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,744 copying build/lib.linux-armv7l-cpython-311/mdapy/common_neighbor_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,747 copying build/lib.linux-armv7l-cpython-311/mdapy/__init__.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,748 copying build/lib.linux-armv7l-cpython-311/mdapy/ackland_jones_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,750 copying build/lib.linux-armv7l-cpython-311/mdapy/entropy.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,753 copying build/lib.linux-armv7l-cpython-311/mdapy/steinhardt_bond_orientation.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,756 creating build/bdist.linux-armv7l/wheel/mdapy/cluster 2023-12-18T10:13:15,757 copying build/lib.linux-armv7l-cpython-311/mdapy/cluster/_cluster.cpp -> build/bdist.linux-armv7l/wheel/mdapy/cluster 2023-12-18T10:13:15,759 copying build/lib.linux-armv7l-cpython-311/mdapy/voronoi_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,761 copying build/lib.linux-armv7l-cpython-311/mdapy/eam_generate.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,763 copying build/lib.linux-armv7l-cpython-311/mdapy/eam_average.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,766 copying build/lib.linux-armv7l-cpython-311/mdapy/plotset.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,768 copying build/lib.linux-armv7l-cpython-311/mdapy/timer.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,770 copying build/lib.linux-armv7l-cpython-311/mdapy/lattice_maker.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,772 copying build/lib.linux-armv7l-cpython-311/mdapy/calculator.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,775 copying build/lib.linux-armv7l-cpython-311/mdapy/replicate.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,777 copying build/lib.linux-armv7l-cpython-311/mdapy/lindemann_parameter.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,779 copying build/lib.linux-armv7l-cpython-311/mdapy/spatial_binning.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,782 creating build/bdist.linux-armv7l/wheel/mdapy/ptm 2023-12-18T10:13:15,783 copying build/lib.linux-armv7l-cpython-311/mdapy/ptm/_ptm.cpp -> build/bdist.linux-armv7l/wheel/mdapy/ptm 2023-12-18T10:13:15,785 copying build/lib.linux-armv7l-cpython-311/mdapy/common_neighbor_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,787 copying build/lib.linux-armv7l-cpython-311/mdapy/load_save_data.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,790 copying build/lib.linux-armv7l-cpython-311/mdapy/identify_SFs_TBs.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,792 copying build/lib.linux-armv7l-cpython-311/mdapy/pigz.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,795 copying build/lib.linux-armv7l-cpython-311/mdapy/mean_squared_displacement.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,797 copying build/lib.linux-armv7l-cpython-311/mdapy/temperature.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,799 copying build/lib.linux-armv7l-cpython-311/mdapy/cluser_analysis.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,802 copying build/lib.linux-armv7l-cpython-311/mdapy/create_polycrystalline.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,804 copying build/lib.linux-armv7l-cpython-311/mdapy/__main__.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,806 copying build/lib.linux-armv7l-cpython-311/mdapy/nearest_neighbor.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,809 creating build/bdist.linux-armv7l/wheel/mdapy/voronoi 2023-12-18T10:13:15,810 copying build/lib.linux-armv7l-cpython-311/mdapy/voronoi/_voro.cpp -> build/bdist.linux-armv7l/wheel/mdapy/voronoi 2023-12-18T10:13:15,813 copying build/lib.linux-armv7l-cpython-311/mdapy/system.py -> build/bdist.linux-armv7l/wheel/mdapy 2023-12-18T10:13:15,817 copying build/lib.linux-armv7l-cpython-311/_ptm.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-12-18T10:13:15,824 copying build/lib.linux-armv7l-cpython-311/_neigh.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-12-18T10:13:15,828 copying build/lib.linux-armv7l-cpython-311/_cluster_analysis.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-12-18T10:13:15,832 copying build/lib.linux-armv7l-cpython-311/_voronoi_analysis.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-12-18T10:13:15,843 copying build/lib.linux-armv7l-cpython-311/_rdf.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2023-12-18T10:13:15,848 running install_egg_info 2023-12-18T10:13:15,852 Copying mdapy.egg-info to build/bdist.linux-armv7l/wheel/mdapy-0.10.1-py3.11.egg-info 2023-12-18T10:13:15,866 running install_scripts 2023-12-18T10:13:15,916 creating build/bdist.linux-armv7l/wheel/mdapy-0.10.1.dist-info/WHEEL 2023-12-18T10:13:15,919 creating '/tmp/pip-wheel-3582q9_p/.tmp-1ty1c92f/mdapy-0.10.1-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-18T10:13:15,947 adding '_cluster_analysis.cpython-311-arm-linux-gnueabihf.so' 2023-12-18T10:13:15,975 adding '_neigh.cpython-311-arm-linux-gnueabihf.so' 2023-12-18T10:13:16,022 adding '_ptm.cpython-311-arm-linux-gnueabihf.so' 2023-12-18T10:13:16,051 adding '_rdf.cpython-311-arm-linux-gnueabihf.so' 2023-12-18T10:13:16,156 adding '_voronoi_analysis.cpython-311-arm-linux-gnueabihf.so' 2023-12-18T10:13:16,162 adding 'mdapy/__init__.py' 2023-12-18T10:13:16,163 adding 'mdapy/__main__.py' 2023-12-18T10:13:16,165 adding 'mdapy/ackland_jones_analysis.py' 2023-12-18T10:13:16,167 adding 'mdapy/calculator.py' 2023-12-18T10:13:16,169 adding 'mdapy/centro_symmetry_parameter.py' 2023-12-18T10:13:16,171 adding 'mdapy/cluser_analysis.py' 2023-12-18T10:13:16,173 adding 'mdapy/common_neighbor_analysis.py' 2023-12-18T10:13:16,174 adding 'mdapy/common_neighbor_parameter.py' 2023-12-18T10:13:16,177 adding 'mdapy/create_polycrystalline.py' 2023-12-18T10:13:16,179 adding 'mdapy/eam_average.py' 2023-12-18T10:13:16,181 adding 'mdapy/eam_generate.py' 2023-12-18T10:13:16,183 adding 'mdapy/entropy.py' 2023-12-18T10:13:16,185 adding 'mdapy/identify_SFs_TBs.py' 2023-12-18T10:13:16,187 adding 'mdapy/lattice_maker.py' 2023-12-18T10:13:16,189 adding 'mdapy/lindemann_parameter.py' 2023-12-18T10:13:16,193 adding 'mdapy/load_save_data.py' 2023-12-18T10:13:16,199 adding 'mdapy/main.py' 2023-12-18T10:13:16,201 adding 'mdapy/mean_squared_displacement.py' 2023-12-18T10:13:16,203 adding 'mdapy/nearest_neighbor.py' 2023-12-18T10:13:16,205 adding 'mdapy/neighbor.py' 2023-12-18T10:13:16,207 adding 'mdapy/pair_distribution.py' 2023-12-18T10:13:16,209 adding 'mdapy/pigz.py' 2023-12-18T10:13:16,211 adding 'mdapy/plotset.py' 2023-12-18T10:13:16,213 adding 'mdapy/polyhedral_template_matching.py' 2023-12-18T10:13:16,215 adding 'mdapy/potential.py' 2023-12-18T10:13:16,216 adding 'mdapy/replicate.py' 2023-12-18T10:13:16,218 adding 'mdapy/spatial_binning.py' 2023-12-18T10:13:16,222 adding 'mdapy/steinhardt_bond_orientation.py' 2023-12-18T10:13:16,231 adding 'mdapy/system.py' 2023-12-18T10:13:16,233 adding 'mdapy/temperature.py' 2023-12-18T10:13:16,234 adding 'mdapy/timer.py' 2023-12-18T10:13:16,237 adding 'mdapy/tool_function.py' 2023-12-18T10:13:16,238 adding 'mdapy/visualize.py' 2023-12-18T10:13:16,240 adding 'mdapy/void_distribution.py' 2023-12-18T10:13:16,242 adding 'mdapy/voronoi_analysis.py' 2023-12-18T10:13:16,244 adding 'mdapy/warren_cowley_parameter.py' 2023-12-18T10:13:16,246 adding 'mdapy/cluster/_cluster.cpp' 2023-12-18T10:13:16,248 adding 'mdapy/neigh/_neigh.cpp' 2023-12-18T10:13:16,250 adding 'mdapy/ptm/_ptm.cpp' 2023-12-18T10:13:16,252 adding 'mdapy/rdf/_rdf.cpp' 2023-12-18T10:13:16,254 adding 'mdapy/voronoi/_voro.cpp' 2023-12-18T10:13:16,256 adding 'mdapy-0.10.1.dist-info/LICENSE' 2023-12-18T10:13:16,257 adding 'mdapy-0.10.1.dist-info/METADATA' 2023-12-18T10:13:16,258 adding 'mdapy-0.10.1.dist-info/WHEEL' 2023-12-18T10:13:16,259 adding 'mdapy-0.10.1.dist-info/entry_points.txt' 2023-12-18T10:13:16,260 adding 'mdapy-0.10.1.dist-info/top_level.txt' 2023-12-18T10:13:16,262 adding 'mdapy-0.10.1.dist-info/RECORD' 2023-12-18T10:13:16,270 removing build/bdist.linux-armv7l/wheel 2023-12-18T10:13:16,409 Building wheel for mdapy (pyproject.toml): finished with status 'done' 2023-12-18T10:13:16,430 Created wheel for mdapy: filename=mdapy-0.10.1-cp311-cp311-linux_armv7l.whl size=660904 sha256=6d9f1038d0140f3868829a246d7da94e5c2f24c2a0adcef8dde9e87bfd764227 2023-12-18T10:13:16,431 Stored in directory: /tmp/pip-ephem-wheel-cache-jdjq0sol/wheels/36/0a/cc/0df68ffc5e512381b6bcf816e29b5bb3a228793f799346d8a3 2023-12-18T10:13:16,445 Successfully built mdapy 2023-12-18T10:13:16,473 Removed build tracker: '/tmp/pip-build-tracker-5z_hin_q'