2023-12-19T11:54:23,686 Created temporary directory: /tmp/pip-build-tracker-qadb0cjr 2023-12-19T11:54:23,687 Initialized build tracking at /tmp/pip-build-tracker-qadb0cjr 2023-12-19T11:54:23,687 Created build tracker: /tmp/pip-build-tracker-qadb0cjr 2023-12-19T11:54:23,688 Entered build tracker: /tmp/pip-build-tracker-qadb0cjr 2023-12-19T11:54:23,688 Created temporary directory: /tmp/pip-wheel-xcx28t7h 2023-12-19T11:54:23,692 Created temporary directory: /tmp/pip-ephem-wheel-cache-ixu5hoz9 2023-12-19T11:54:23,716 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-12-19T11:54:23,720 2 location(s) to search for versions of bad-phylo: 2023-12-19T11:54:23,720 * https://pypi.org/simple/bad-phylo/ 2023-12-19T11:54:23,720 * https://www.piwheels.org/simple/bad-phylo/ 2023-12-19T11:54:23,721 Fetching project page and analyzing links: https://pypi.org/simple/bad-phylo/ 2023-12-19T11:54:23,721 Getting page https://pypi.org/simple/bad-phylo/ 2023-12-19T11:54:23,723 Found index url https://pypi.org/simple/ 2023-12-19T11:54:23,937 Fetched page https://pypi.org/simple/bad-phylo/ as application/vnd.pypi.simple.v1+json 2023-12-19T11:54:23,939 Found link https://files.pythonhosted.org/packages/02/fc/c70d36218e75c04ee5b6d09e7946a51ee55b4a380a8a963885975a7e4a69/bad-phylo-0.0.1.tar.gz (from https://pypi.org/simple/bad-phylo/), version: 0.0.1 2023-12-19T11:54:23,940 Skipping link: No binaries permitted for bad-phylo: https://files.pythonhosted.org/packages/2d/90/41a31c97a18f591ad6af4476e917b6a9b86b608c628132288a89f8e4dfef/bad_phylo-0.0.1-py3-none-any.whl (from https://pypi.org/simple/bad-phylo/) 2023-12-19T11:54:23,941 Found link https://files.pythonhosted.org/packages/be/8c/ce567f6e37458111037e34ce953dccae59875dd7161d0e935e3dc482d1a2/bad-phylo-0.0.2.tar.gz (from https://pypi.org/simple/bad-phylo/), version: 0.0.2 2023-12-19T11:54:23,941 Skipping link: No binaries permitted for bad-phylo: https://files.pythonhosted.org/packages/b7/0b/f3eb9aa7ce8a8ed72c4cd2148282bb063d595568c11f0cb63b4f7aee6b16/bad_phylo-0.0.2-py3-none-any.whl (from https://pypi.org/simple/bad-phylo/) 2023-12-19T11:54:23,942 Fetching project page and analyzing links: https://www.piwheels.org/simple/bad-phylo/ 2023-12-19T11:54:23,943 Getting page https://www.piwheels.org/simple/bad-phylo/ 2023-12-19T11:54:23,944 Found index url https://www.piwheels.org/simple/ 2023-12-19T11:54:24,102 Fetched page https://www.piwheels.org/simple/bad-phylo/ as text/html 2023-12-19T11:54:24,104 Skipping link: No binaries permitted for bad-phylo: https://www.piwheels.org/simple/bad-phylo/bad_phylo-0.0.1-py3-none-any.whl#sha256=f701605e617f69e9425b1ae549e1f86ae8c35eff76bb675deabaa5d5075e3333 (from https://www.piwheels.org/simple/bad-phylo/) 2023-12-19T11:54:24,105 Skipping link: not a file: https://www.piwheels.org/simple/bad-phylo/ 2023-12-19T11:54:24,105 Skipping link: not a file: https://pypi.org/simple/bad-phylo/ 2023-12-19T11:54:24,123 Given no hashes to check 1 links for project 'bad-phylo': discarding no candidates 2023-12-19T11:54:24,142 Collecting bad-phylo==0.0.2 2023-12-19T11:54:24,144 Created temporary directory: /tmp/pip-unpack-pkznrig3 2023-12-19T11:54:24,356 Downloading bad-phylo-0.0.2.tar.gz (117 kB) 2023-12-19T11:54:24,481 Added bad-phylo==0.0.2 from https://files.pythonhosted.org/packages/be/8c/ce567f6e37458111037e34ce953dccae59875dd7161d0e935e3dc482d1a2/bad-phylo-0.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-qadb0cjr' 2023-12-19T11:54:24,483 Running setup.py (path:/tmp/pip-wheel-xcx28t7h/bad-phylo_e4696a12728946b4ba8372c94db3cbc1/setup.py) egg_info for package bad-phylo 2023-12-19T11:54:24,484 Created temporary directory: /tmp/pip-pip-egg-info-kebjmmxo 2023-12-19T11:54:24,485 Preparing metadata (setup.py): started 2023-12-19T11:54:24,486 Running command python setup.py egg_info 2023-12-19T11:54:25,573 running egg_info 2023-12-19T11:54:25,575 creating /tmp/pip-pip-egg-info-kebjmmxo/bad_phylo.egg-info 2023-12-19T11:54:25,600 writing /tmp/pip-pip-egg-info-kebjmmxo/bad_phylo.egg-info/PKG-INFO 2023-12-19T11:54:25,603 writing dependency_links to /tmp/pip-pip-egg-info-kebjmmxo/bad_phylo.egg-info/dependency_links.txt 2023-12-19T11:54:25,605 writing entry points to /tmp/pip-pip-egg-info-kebjmmxo/bad_phylo.egg-info/entry_points.txt 2023-12-19T11:54:25,607 writing requirements to /tmp/pip-pip-egg-info-kebjmmxo/bad_phylo.egg-info/requires.txt 2023-12-19T11:54:25,608 writing top-level names to /tmp/pip-pip-egg-info-kebjmmxo/bad_phylo.egg-info/top_level.txt 2023-12-19T11:54:25,609 writing manifest file '/tmp/pip-pip-egg-info-kebjmmxo/bad_phylo.egg-info/SOURCES.txt' 2023-12-19T11:54:25,692 reading manifest file '/tmp/pip-pip-egg-info-kebjmmxo/bad_phylo.egg-info/SOURCES.txt' 2023-12-19T11:54:25,694 reading manifest template 'MANIFEST.in' 2023-12-19T11:54:25,698 adding license file 'LICENSE' 2023-12-19T11:54:25,700 writing manifest file '/tmp/pip-pip-egg-info-kebjmmxo/bad_phylo.egg-info/SOURCES.txt' 2023-12-19T11:54:25,806 Preparing metadata (setup.py): finished with status 'done' 2023-12-19T11:54:25,810 Source in /tmp/pip-wheel-xcx28t7h/bad-phylo_e4696a12728946b4ba8372c94db3cbc1 has version 0.0.2, which satisfies requirement bad-phylo==0.0.2 from https://files.pythonhosted.org/packages/be/8c/ce567f6e37458111037e34ce953dccae59875dd7161d0e935e3dc482d1a2/bad-phylo-0.0.2.tar.gz 2023-12-19T11:54:25,811 Removed bad-phylo==0.0.2 from https://files.pythonhosted.org/packages/be/8c/ce567f6e37458111037e34ce953dccae59875dd7161d0e935e3dc482d1a2/bad-phylo-0.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-qadb0cjr' 2023-12-19T11:54:25,816 Created temporary directory: /tmp/pip-unpack-i07b3g_m 2023-12-19T11:54:25,817 Created temporary directory: /tmp/pip-unpack-rsg13v3k 2023-12-19T11:54:25,829 Building wheels for collected packages: bad-phylo 2023-12-19T11:54:25,834 Created temporary directory: /tmp/pip-wheel-e1tgbcyw 2023-12-19T11:54:25,834 Building wheel for bad-phylo (setup.py): started 2023-12-19T11:54:25,835 Destination directory: /tmp/pip-wheel-e1tgbcyw 2023-12-19T11:54:25,836 Running command python setup.py bdist_wheel 2023-12-19T11:54:26,824 running bdist_wheel 2023-12-19T11:54:26,921 running build 2023-12-19T11:54:26,922 running build_py 2023-12-19T11:54:26,950 creating build 2023-12-19T11:54:26,950 creating build/lib 2023-12-19T11:54:26,951 creating build/lib/features 2023-12-19T11:54:26,953 copying features/kmer_processing.py -> build/lib/features 2023-12-19T11:54:26,955 copying features/perceptual_hash_processing.py -> build/lib/features 2023-12-19T11:54:26,957 copying features/feature_extractor.py -> build/lib/features 2023-12-19T11:54:26,959 copying features/feature_computer.py -> build/lib/features 2023-12-19T11:54:26,962 copying features/__init__.py -> build/lib/features 2023-12-19T11:54:26,963 copying features/substitution_processing.py -> build/lib/features 2023-12-19T11:54:26,966 creating build/lib/models 2023-12-19T11:54:26,967 copying models/get_model.py -> build/lib/models 2023-12-19T11:54:26,969 copying models/__init__.py -> build/lib/models 2023-12-19T11:54:26,970 creating build/lib/prediction 2023-12-19T11:54:26,971 copying prediction/predictor.py -> build/lib/prediction 2023-12-19T11:54:26,974 copying prediction/__init__.py -> build/lib/prediction 2023-12-19T11:54:26,976 creating build/lib/utils 2023-12-19T11:54:26,977 copying utils/utils.py -> build/lib/utils 2023-12-19T11:54:26,979 copying utils/__init__.py -> build/lib/utils 2023-12-19T11:54:26,980 creating build/lib/app 2023-12-19T11:54:26,982 copying app/__main__.py -> build/lib/app 2023-12-19T11:54:26,984 copying app/__init__.py -> build/lib/app 2023-12-19T11:54:26,985 running egg_info 2023-12-19T11:54:27,041 writing bad_phylo.egg-info/PKG-INFO 2023-12-19T11:54:27,045 writing dependency_links to bad_phylo.egg-info/dependency_links.txt 2023-12-19T11:54:27,046 writing entry points to bad_phylo.egg-info/entry_points.txt 2023-12-19T11:54:27,048 writing requirements to bad_phylo.egg-info/requires.txt 2023-12-19T11:54:27,049 writing top-level names to bad_phylo.egg-info/top_level.txt 2023-12-19T11:54:27,077 reading manifest file 'bad_phylo.egg-info/SOURCES.txt' 2023-12-19T11:54:27,080 reading manifest template 'MANIFEST.in' 2023-12-19T11:54:27,089 adding license file 'LICENSE' 2023-12-19T11:54:27,091 writing manifest file 'bad_phylo.egg-info/SOURCES.txt' 2023-12-19T11:54:27,094 copying models/bad.pkl -> build/lib/models 2023-12-19T11:54:27,126 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-12-19T11:54:27,127 !! 2023-12-19T11:54:27,128 ******************************************************************************** 2023-12-19T11:54:27,128 Please avoid running ``setup.py`` directly. 2023-12-19T11:54:27,129 Instead, use pypa/build, pypa/installer or other 2023-12-19T11:54:27,129 standards-based tools. 2023-12-19T11:54:27,130 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-12-19T11:54:27,130 ******************************************************************************** 2023-12-19T11:54:27,131 !! 2023-12-19T11:54:27,132 self.initialize_options() 2023-12-19T11:54:27,151 installing to build/bdist.linux-armv7l/wheel 2023-12-19T11:54:27,151 running install 2023-12-19T11:54:27,175 running install_lib 2023-12-19T11:54:27,199 creating build/bdist.linux-armv7l 2023-12-19T11:54:27,199 creating build/bdist.linux-armv7l/wheel 2023-12-19T11:54:27,201 creating build/bdist.linux-armv7l/wheel/features 2023-12-19T11:54:27,202 copying build/lib/features/kmer_processing.py -> build/bdist.linux-armv7l/wheel/features 2023-12-19T11:54:27,204 copying build/lib/features/perceptual_hash_processing.py -> build/bdist.linux-armv7l/wheel/features 2023-12-19T11:54:27,206 copying build/lib/features/feature_extractor.py -> build/bdist.linux-armv7l/wheel/features 2023-12-19T11:54:27,208 copying build/lib/features/feature_computer.py -> build/bdist.linux-armv7l/wheel/features 2023-12-19T11:54:27,211 copying build/lib/features/__init__.py -> build/bdist.linux-armv7l/wheel/features 2023-12-19T11:54:27,212 copying build/lib/features/substitution_processing.py -> build/bdist.linux-armv7l/wheel/features 2023-12-19T11:54:27,215 creating build/bdist.linux-armv7l/wheel/models 2023-12-19T11:54:27,216 copying build/lib/models/get_model.py -> build/bdist.linux-armv7l/wheel/models 2023-12-19T11:54:27,218 copying build/lib/models/bad.pkl -> build/bdist.linux-armv7l/wheel/models 2023-12-19T11:54:27,224 copying build/lib/models/__init__.py -> build/bdist.linux-armv7l/wheel/models 2023-12-19T11:54:27,226 creating build/bdist.linux-armv7l/wheel/prediction 2023-12-19T11:54:27,227 copying build/lib/prediction/predictor.py -> build/bdist.linux-armv7l/wheel/prediction 2023-12-19T11:54:27,229 copying build/lib/prediction/__init__.py -> build/bdist.linux-armv7l/wheel/prediction 2023-12-19T11:54:27,231 creating build/bdist.linux-armv7l/wheel/utils 2023-12-19T11:54:27,232 copying build/lib/utils/utils.py -> build/bdist.linux-armv7l/wheel/utils 2023-12-19T11:54:27,234 copying build/lib/utils/__init__.py -> build/bdist.linux-armv7l/wheel/utils 2023-12-19T11:54:27,235 creating build/bdist.linux-armv7l/wheel/app 2023-12-19T11:54:27,236 copying build/lib/app/__main__.py -> build/bdist.linux-armv7l/wheel/app 2023-12-19T11:54:27,238 copying build/lib/app/__init__.py -> build/bdist.linux-armv7l/wheel/app 2023-12-19T11:54:27,240 running install_egg_info 2023-12-19T11:54:27,271 Copying bad_phylo.egg-info to build/bdist.linux-armv7l/wheel/bad_phylo-0.0.2-py3.11.egg-info 2023-12-19T11:54:27,283 running install_scripts 2023-12-19T11:54:27,301 creating build/bdist.linux-armv7l/wheel/bad_phylo-0.0.2.dist-info/WHEEL 2023-12-19T11:54:27,304 creating '/tmp/pip-wheel-e1tgbcyw/bad_phylo-0.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-12-19T11:54:27,306 adding 'app/__init__.py' 2023-12-19T11:54:27,307 adding 'app/__main__.py' 2023-12-19T11:54:27,310 adding 'features/__init__.py' 2023-12-19T11:54:27,313 adding 'features/feature_computer.py' 2023-12-19T11:54:27,315 adding 'features/feature_extractor.py' 2023-12-19T11:54:27,316 adding 'features/kmer_processing.py' 2023-12-19T11:54:27,317 adding 'features/perceptual_hash_processing.py' 2023-12-19T11:54:27,319 adding 'features/substitution_processing.py' 2023-12-19T11:54:27,321 adding 'models/__init__.py' 2023-12-19T11:54:27,368 adding 'models/bad.pkl' 2023-12-19T11:54:27,371 adding 'models/get_model.py' 2023-12-19T11:54:27,372 adding 'prediction/__init__.py' 2023-12-19T11:54:27,374 adding 'prediction/predictor.py' 2023-12-19T11:54:27,375 adding 'utils/__init__.py' 2023-12-19T11:54:27,377 adding 'utils/utils.py' 2023-12-19T11:54:27,383 adding 'bad_phylo-0.0.2.dist-info/LICENSE' 2023-12-19T11:54:27,385 adding 'bad_phylo-0.0.2.dist-info/METADATA' 2023-12-19T11:54:27,386 adding 'bad_phylo-0.0.2.dist-info/WHEEL' 2023-12-19T11:54:27,386 adding 'bad_phylo-0.0.2.dist-info/entry_points.txt' 2023-12-19T11:54:27,387 adding 'bad_phylo-0.0.2.dist-info/top_level.txt' 2023-12-19T11:54:27,388 adding 'bad_phylo-0.0.2.dist-info/RECORD' 2023-12-19T11:54:27,391 removing build/bdist.linux-armv7l/wheel 2023-12-19T11:54:27,506 Building wheel for bad-phylo (setup.py): finished with status 'done' 2023-12-19T11:54:27,509 Created wheel for bad-phylo: filename=bad_phylo-0.0.2-py3-none-any.whl size=120658 sha256=30b47886d6f2d8804edb2445b78346be5601ca5ae8c14b7da2801c8492f2a6eb 2023-12-19T11:54:27,511 Stored in directory: /tmp/pip-ephem-wheel-cache-ixu5hoz9/wheels/65/d9/af/902d0d97070c1b6edf4e343d56790ca8fe3393912db904486b 2023-12-19T11:54:27,522 Successfully built bad-phylo 2023-12-19T11:54:27,528 Removed build tracker: '/tmp/pip-build-tracker-qadb0cjr'