2024-01-05T01:29:15,344 Created temporary directory: /tmp/pip-build-tracker-4qc96r2f 2024-01-05T01:29:15,346 Initialized build tracking at /tmp/pip-build-tracker-4qc96r2f 2024-01-05T01:29:15,346 Created build tracker: /tmp/pip-build-tracker-4qc96r2f 2024-01-05T01:29:15,346 Entered build tracker: /tmp/pip-build-tracker-4qc96r2f 2024-01-05T01:29:15,347 Created temporary directory: /tmp/pip-wheel-qe7bgnzy 2024-01-05T01:29:15,351 Created temporary directory: /tmp/pip-ephem-wheel-cache-wgnrq5uz 2024-01-05T01:29:15,379 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-05T01:29:15,383 2 location(s) to search for versions of trisicell: 2024-01-05T01:29:15,383 * https://pypi.org/simple/trisicell/ 2024-01-05T01:29:15,383 * https://www.piwheels.org/simple/trisicell/ 2024-01-05T01:29:15,383 Fetching project page and analyzing links: https://pypi.org/simple/trisicell/ 2024-01-05T01:29:15,384 Getting page https://pypi.org/simple/trisicell/ 2024-01-05T01:29:15,385 Found index url https://pypi.org/simple/ 2024-01-05T01:29:15,443 Fetched page https://pypi.org/simple/trisicell/ as application/vnd.pypi.simple.v1+json 2024-01-05T01:29:15,492 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d3/b8/2950fd2454a806fc4e752550f3a1e904c28b64cd00b2e3ee256347d0bf3e/trisicell-0.0.1-py3-none-any.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,493 Found link https://files.pythonhosted.org/packages/0f/77/31db547e742846df730f8781d49cc48ff7bd57e693f72b0395d30a6829c3/trisicell-0.0.1.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.1 2024-01-05T01:29:15,493 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/fa/b2/6fb0a205be456eb6fbcfc6c5b083c4f6d956632c21a34ffaa18b36c9fe76/trisicell-0.0.2-py3-none-any.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,494 Found link https://files.pythonhosted.org/packages/ce/b5/21b4e3824519dc1a88b1739b340f38af88b62eecfc9b5aa9cd7677df48a9/trisicell-0.0.2.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.2 2024-01-05T01:29:15,494 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/86/35/557a32884b5081d4645717d2d73bda6c75f7fde6f4f7511d74a7323a8a3e/trisicell-0.0.3-py3-none-any.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,495 Found link https://files.pythonhosted.org/packages/fe/42/67954c24d7ff4c671b56f453c80b4e16802763c1d6995ff92afb7fd31218/trisicell-0.0.3.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.3 2024-01-05T01:29:15,495 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/43/f2/e79dcc28e0095e1c808c1250cd9c6878a025ed842cb2f552099dfc0e75e1/trisicell-0.0.4-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,495 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e1/6b/2cde12b1c4a1e4e4c700fe1cb6381bfa45fd88dcaff9a8a11a466499d3a4/trisicell-0.0.5-cp37-cp37m-manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,495 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/52/77/f576fe4f1d51a1c25a0b48fca809994e32ba23fc97cdf7d46bce3d25a753/trisicell-0.0.6-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,496 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/5e/4d/9c8b5d9e3b215cc96eedc5e26653435d9b3672c6cfb550d4bb2c00d7b356/trisicell-0.0.7-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,496 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f6/14/06ed20f29289c004db1b2199ff3d16f6af748015fe9ea2f7359cfb15a77d/trisicell-0.0.8-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,496 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9d/31/2ba8d94d342b4ae52a741c024748302eaa5470e8016d6229ae8d70303805/trisicell-0.0.9-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,496 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/95/4a/2f93780b7f99a6d374aaf6e2683c88ae2816664461694bb1053a02d8ab2d/trisicell-0.0.10-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,496 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d7/c8/3955d678890b02ce13119cbfbd8845d0b4697f8011c049c4708f77c217fa/trisicell-0.0.10-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,497 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/15/fc/8c9ccb70b5bc5f772bf1ed47fb5a69f57c9366c3080eb51bc1ffe179395c/trisicell-0.0.10-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,497 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/37/40a4dc368c6c9fe0e5322ef68de70fe2f82052acd7c4f86e78809b204d9d/trisicell-0.0.10-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,497 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/89/ce/21f6ba6ea18fe75c6bdc3bdef8b738e9e38d8410f97acecc31f1c34a1ea6/trisicell-0.0.10-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,497 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b3/88/2818eaaefda0fe41d7d9244c3baa10826c2a816b61853c35b76c2ea0cf08/trisicell-0.0.10-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,497 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3d/54/dd8fd80a1519d5d2b61be06976dc83ecb4a313c67222784979b4dd4562a3/trisicell-0.0.10-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,498 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d0/f7/71587b93fd9a862b23b593d68981164c462cbc171e8f83396694a69f66ad/trisicell-0.0.10-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,498 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e6/e3/4d22c1afbf3984957aa19ff3d552e0daa89c560a48b12691d12600efd7e6/trisicell-0.0.10-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,498 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f4/57/dc75865dfa7f68ce1ecc5da762ea64e716c2992ee3c091ae049c0afbab76/trisicell-0.0.10-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,498 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0b/5c/25cb5b003df9264665bf20eab56e654f35a5352f581e54d2fee83c85a0e8/trisicell-0.0.10-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,498 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b5/ac/1ffd83c0cdb49aae3e2407de9b988b11ab36fda097faf5cf33ac21649812/trisicell-0.0.10-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,499 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1e/af/dbdafefd2bd2ae816e1945b9195b30c0c54785f8122fc9d664531b590e7c/trisicell-0.0.10-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,499 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/96/41/2b2b17f0b7bb66ababb403d1132a69115e1d25357f20e388b66d1b4a84dd/trisicell-0.0.10-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,499 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9b/7f/5cac564f5e251b071fa271e4c0549c8b001ddd1a31fd7ab3bd319c55e429/trisicell-0.0.10-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,500 Found link https://files.pythonhosted.org/packages/be/35/77379d91c1ed8566f2692c3086936d1eec091a6ee37244e152e2d31e3d5c/trisicell-0.0.10.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.10 2024-01-05T01:29:15,500 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/39/9b/c6f63cfede491173af4570a3a8adb0b23e5db82963b3b3a49a12096e8727/trisicell-0.0.11-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,500 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/4b/ff3d54872b512626d17e9e1309e53a78ecc0dcfdae338372501bb974348a/trisicell-0.0.11-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,500 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/25/9d/e6175c0845bf72aee1d3a871f99fd0512df522d2076714c1271db43b1a98/trisicell-0.0.11-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,500 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/91/37/b6772ee6c1913db7797b17dfe25b925f664f23c964c17d5386cad2e15974/trisicell-0.0.11-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,501 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f3/14/6bc32344227b4b18a9e4e4f46d705e81c89c21d33be921845b407581d8f1/trisicell-0.0.11-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,501 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1b/3c/0ba95413a931207f805fb98c773ad42df37ef563b4303b53e674f81da3ae/trisicell-0.0.11-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,501 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/b2/50/0923287bd9d9e77601d7aad9bed1fe1e800f3a146b22537b10199f19b84d/trisicell-0.0.11-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,502 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/a5/45/acafa55914adb8ce819bf0414bb58a84046535ac53c200ec6fc30684d1b4/trisicell-0.0.11-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,502 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3a/f6/0ddcd1f79c438237935a58553f896f51b87852330303eba37f8091f30820/trisicell-0.0.11-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,502 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7b/63/108215b1ee9a07a503f3889a146c21fcb1a0216d0a9c9ee4a4ac58403335/trisicell-0.0.11-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,502 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ac/c7/cf4987e84c512495fcfd776fa3295e9c9c3bd27e0c5b47e9d1c727318b4d/trisicell-0.0.11-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,503 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ee/88/c4f3a4b20d01daec3dbc9bc150e10420a84e0f6737f8b8f1566116d70651/trisicell-0.0.11-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,503 Found link https://files.pythonhosted.org/packages/eb/2a/a163038e304553b5a43b7532fe6093486d48eada442e7efdc944b67b8cb6/trisicell-0.0.11.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.11 2024-01-05T01:29:15,503 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/89/4f/3fb4123f6e54a0e55759cd13a3ac5bad7329e0f12db6e1fefd5df5c50c02/trisicell-0.0.12-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,504 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b1/ef/fc937cc8002bdb83627ee72d573aaeadd0c1fdd3193f7d975acd022d51c6/trisicell-0.0.12-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,504 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/31/1f/6be51d3dbe2fc8c8bebcf9d3ef65bbc0eb032e2a6cae295d8b6ba90765c7/trisicell-0.0.12-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,504 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/a1/cbecb821708867f74b50850da19a73c6bd5f76ba9515e3c438f46dcba55a/trisicell-0.0.12-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,504 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d7/e5/c4c150f5efca3f50a7616e13264b54646b3ffa33814c7aa3600ebceae4d1/trisicell-0.0.12-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,504 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2c/2d/55edfcefb69b65b51fda5bcc4f35dff8e3d3bc9b635d06db52ebc5de0285/trisicell-0.0.12-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,505 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0f/56/1b51c8351499be210b2796341f52d6df8775993dc52f306403d734a295b8/trisicell-0.0.12-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,505 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7e/f8/d4bf1c3bc2d61c0fdf4517ee957710c901fb76185db17e971c0861bda284/trisicell-0.0.12-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,505 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1c/7c/faccfe894e56285406078ebc6b41aec43dc494813c28382277355bf9ee24/trisicell-0.0.12-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,505 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/dc/c3/6d40f602bf437f538e88dff4b954c4d68c2bce613e0ec7317afdc816ebd8/trisicell-0.0.12-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,505 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/80/f4/bd2b84a751e40c872e238094e51469feb02657fa518236a45793dd782d8e/trisicell-0.0.12-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,506 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/2c/17e9aed816b843dbdc618f82f319b4f8f0e7eb6314f379fb041afab061b3/trisicell-0.0.12-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,506 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/12/c5/e45f81f8e73901115c192f3fe34b5cae11ed6ab3d39e51153780b2a180e0/trisicell-0.0.12-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,506 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e0/88/82561e771a63dcfdecbb2b53c03ad596a906d678dac3a191a16688f9c0af/trisicell-0.0.12-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,506 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3a/7b/e9826627d69511e5882ca953a9e4a59a41802c6fe996f6e4da7804051962/trisicell-0.0.12-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,507 Found link https://files.pythonhosted.org/packages/c7/e1/ade053876eb2b0fdb9ef2a4f42f18b2403471a9b26cf899cba463043bdb7/trisicell-0.0.12.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.12 2024-01-05T01:29:15,507 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ab/e5/6fd6cbb639907d603cfdaa19ee4302399dd6cc8ab1132b9f7ca1cbf8ebdf/trisicell-0.0.13-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,507 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/20/0f/1fcaf044125497e9bbaa104a4633a471526da27ba8dfc99287cd43ef9ea6/trisicell-0.0.13-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,507 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/fa/88/b0954c49e4b3a57bdf6c16432d57c53ea3bb9e2167f8d740b48a654934b7/trisicell-0.0.13-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,508 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/91/c9f37b1e697162e05de9d4fe3f6b8618f64fc449b97039c6a3ecabe2bf0a/trisicell-0.0.13-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,508 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6b/1d/c7f96ba029d9245c41f01ed94e2adb4cb5b882b24cc08d5ef494dbab2861/trisicell-0.0.13-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,508 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e8/54/fb79653e635e525df834f961f12c0c7f2c9b74b8265bbe7e8431cc267c3f/trisicell-0.0.13-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,508 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7c/04/1adecb721dfb5995fbb5807098a2ceaf82a6dc3ee4ee818399459bd0b2bc/trisicell-0.0.13-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,508 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/04/27/9a6c31bc224f97a234a6fed633ea70838b1be42dba389b8bcf4e28d99ebd/trisicell-0.0.13-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,510 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/63/13/7de9b8204e69c845e12a4d5cb8bc013353e2ddec809d64f3dce801c4ab5d/trisicell-0.0.13-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,510 Found link https://files.pythonhosted.org/packages/10/c6/dec3a854615f1d75f90854c1e27c401d931f1c854f24bfabffcb7b73373a/trisicell-0.0.13.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.13 2024-01-05T01:29:15,511 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ef/1c/413c65088f586d97b3dafaad37e64223a31f0ca44ff1dd6ae98db6b92baf/trisicell-0.0.14-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,511 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/48/95/2976bc1892dcefadbef6ac9f3f57e8038b5d42b3253e3af527e4c1fcb9b6/trisicell-0.0.14-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,511 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9d/39/aa9dbdafcb926cbcbc3533d9084381508992d8d5de95e1e02187aae32286/trisicell-0.0.14-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,511 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/96/b4/2315f07e590ed7dd0c489a4a7ed0b101099192629a2ec3ae2b937cab0918/trisicell-0.0.14.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.14 2024-01-05T01:29:15,514 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/af/08/cb80b06db6765ecad6479ed30e8ecf9159bbf3778dedb614fc0846dda264/trisicell-0.0.15-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,514 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/23/33/03a174d81c58e8a719888629de16b89e8b365b2d030beab5306538e4de49/trisicell-0.0.15-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,514 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/23/b9/698c67ae9194ebb50148963fdc2740ad07e8b9775ffa49a2c2f77186cf19/trisicell-0.0.15-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,515 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/09/3e/c41835cb89d53b4952552796cc5f2827c6950f6c3934e8d648e3f1ff5605/trisicell-0.0.15-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,515 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/26/f4/42172fde474a5dcce1a06e9be79fcdfa9e28229289e1b67403159894ea9e/trisicell-0.0.15-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,515 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3e/14/af5b4d5e8615866ec8102aff1802592c29ff192bd09e42731dd6a8d160f3/trisicell-0.0.15-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,515 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/28/58/336004d3547aec8a0a23742b642c51356d5a5a597f4de162c381f09b37c4/trisicell-0.0.15-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,515 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0e/70/49207d6c5989b84af2e14e4815a486894b0825764e2303e8460804a2f6d5/trisicell-0.0.15-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,516 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c7/98/1ebae14aa5be3b1c97aff53a647c7d3c210129a00058c8c53ccaefcd8554/trisicell-0.0.15-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,516 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/49/30/7043332c770a9ea0f6de404ff7207997eb63e9235bc3d94df875adec6275/trisicell-0.0.15-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,516 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/5d/01/927e0e5d3f799adefe2eef3958d188c1d5fb64e9985b3ec61d6f25ee1887/trisicell-0.0.15-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,516 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/68/60/32ab36da479a3a5dbe3fed6940cbcb04ec2a37821cf74bc888ef8b83bd74/trisicell-0.0.15-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,516 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0d/5b/e0fed4825a2ca741be71ee2abbb993e33a91ea56319d04b474392b1ab310/trisicell-0.0.15-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,517 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/56/19/162c9241acabd2705cc5c2cc9ba6291ce71add4cda2286ed08f31d6d93d3/trisicell-0.0.15-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,517 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/1e/74/e59316d78a645710e28f41a0a286d4d712b517bf64a01bb543d40b9c67e7/trisicell-0.0.15-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,517 Found link https://files.pythonhosted.org/packages/09/51/b71422ae4bfc6904bc6197b9a0ba7b00873719306e27f8d549ea713a2eb4/trisicell-0.0.15.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.15 2024-01-05T01:29:15,518 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ba/ef/b141bb5e6beaf5d3f40aa0f47e5f58c4a3616f26f6b439d416c4a22c71e6/trisicell-0.0.17-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,518 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ce/bb/a84f280257973126cabf750f512aad66408f3ffc8eda178900d687902160/trisicell-0.0.17-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,518 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d9/8b/26e7b6fe7c9f0a801b9560f64ffa9d281bcb38252ca1e56df50c1fd34c8b/trisicell-0.0.17-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,518 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/47/d2/61987600a45df1b54af4c54b6c6ee808f9178103bbde24d89003378e6bb4/trisicell-0.0.17-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,518 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f9/0a/79294e867f4db48e0b382c39fb76360b77ec467eff09de99e7b772aedb7a/trisicell-0.0.17-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,519 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/09/c6/670c6154db038cf35e6e1ced5ebce4dcdc3b8a47103d042becde5b63bc78/trisicell-0.0.17-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,519 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/8b/7f/8c576ba6a21ff37ea84af2dd20e47edf0965dd82dfd88ee3717071d25dad/trisicell-0.0.17-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,519 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/f3/29/bffe7f588eca7168fd896e27d8f36a57c19caeb31469a34f3bfe7dd5de9c/trisicell-0.0.17-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,520 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ff/37/7765ac505e8d76a21adbcedf6830abd6c074c0c4dd694621ec3b959afa0b/trisicell-0.0.17-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,520 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c9/b3/8be886c5602d9719f47eca15a0093147649424da89bdf5034afa799a39d8/trisicell-0.0.17-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,520 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d5/3e/b4d8e5e2b1ab9d81c0b9e09ace7cf2e822b2aad41824555c57255c331c37/trisicell-0.0.17-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,520 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/fe/5b/281df62e3fd3a2427e173491695f1e53c86fc342c0af967025f6c497f5a0/trisicell-0.0.17-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,521 Found link https://files.pythonhosted.org/packages/8f/50/417a46ad6591aba07b8fbe81b15cae4dd35343d3524c2a150c824124b501/trisicell-0.0.17.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.17 2024-01-05T01:29:15,521 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/29/4e/5d083ebef8d7a8a73abc2991bc4f941b90faf5ab0e3bf1e45a8163a86473/trisicell-0.0.18-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,521 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6c/c1/52e9474e3f93bcf3424676c74c0844502cf2a4c52fdf36e6c746b9a1b3db/trisicell-0.0.18-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,521 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2c/bc/84692f18c164186b3b3c5f4c095ee289d6252d4c4253c188aa153c5514d1/trisicell-0.0.18-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,522 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/1e/1e/46b6dd9d3dfa063b03fe440d8419bb254ba347b9d6a6ed62036e21e70019/trisicell-0.0.18.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.18 2024-01-05T01:29:15,525 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d3/4f/d93614ac82e5b5edb63a95e8c9e75c98dea3ee346acaf16618f199f3301b/trisicell-0.0.19-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,525 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ff/89/cf976eb9b0ca028734e266cb632aa99170bcf964f1de41067c6051ede1ad/trisicell-0.0.19-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,525 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/83/01/7e365bc970805f0112341d214e9ceb6c3730ea123f466189cbe7282d0b08/trisicell-0.0.19-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,525 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ff/ff/f430af3b04d9850bb3c4676740bb8c0d12cd88e91aa97e78f5801ee30105/trisicell-0.0.19-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,525 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/89/22/7730486ef2001bbf8dd62950dc964176ca7c176f43ca790b652ad0d4e747/trisicell-0.0.19-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,526 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/92/32/a9558d6f6a9291e6cd95172849256e14c9997eb4ad60a82eb95615a5cdec/trisicell-0.0.19-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,526 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/eb/64/612915a71230c697a44a8835e1ddbad0ddfedfc882acbe5308570b727acb/trisicell-0.0.19-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,527 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2e/36/08d36f74261352be966a34ccb39f6fd23f4eb5fdbad3bdb5597226ed8f87/trisicell-0.0.19-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,527 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/79/279867ef139fa30bccb78f170ccdec30beebfb9746c7b5618fba1dd853b0/trisicell-0.0.19-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,527 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/72/d2/6460afb8eb78ac836faa1dfb4968dbd6fb28fe95c964ef3467e8b2da31ba/trisicell-0.0.19-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,527 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/66/00/8aee47eed339815441421aa74c44ffd9656cf6eb3644a4b6049fd2f154b9/trisicell-0.0.19-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,527 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ae/50/e671e71bda08d505e833d3b3257ca5ad0843365908660ee2f853e8de28b7/trisicell-0.0.19-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,528 Found link https://files.pythonhosted.org/packages/7f/8a/b21a4b088399b772c0d96379d71aec538e74da32131cf383c8903ca4b587/trisicell-0.0.19.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.19 2024-01-05T01:29:15,528 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/63/0e/f7622188c509b0bb7e8518b3a641c71c42d6c920dfa21d8a6f8d02668d9b/trisicell-0.0.20-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,528 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/85/ae/6a8a9c4b00b76c56ed29cad1bc15d6ad0579db4641dd0e3bed94e4af4f47/trisicell-0.0.20-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,528 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/bc/d5/f537f767ef0d300a60c99917b2a126e5c6e26fcc1a2f57a538ab98d5c1e7/trisicell-0.0.20-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,529 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/78/cc/d561d90e65c511fab3fb83c568c2a7435de0a795384e596b616d1ad2c456/trisicell-0.0.20-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,529 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/90/63/239bd4268a11e41aca96d5bee3a8d1f11a00a2d8f33e985a0bb16ee4c5a3/trisicell-0.0.20-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,529 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/4b/ca/bfac2fbaa3d2d4d094c015c9e590ce8032a11973b62dd176e439c2ee8ce8/trisicell-0.0.20-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,529 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/9c/cd/a811ef434301ef4af12de370f4a8af22d99b64b84cb62cbb7613584f1043/trisicell-0.0.20-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,529 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/40/17/b3abf3ab533d0bf6fd93bfd02ae9a55a7a4b5b19eb3f47069ed938b91697/trisicell-0.0.20-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,530 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/12/47/57725061d474ac4e36ca25ad288060de1da9910b156e0ad325602e9c6b0e/trisicell-0.0.20-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,530 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ca/06/247d875e24eda93a9ba980b2712e8af71cb7b6b99627a35cf4f872087af7/trisicell-0.0.20-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,530 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/80/50/a0e1fe6bff27cdfc657b06ca51df5260f7b64c490251a85cf1fcb02d561a/trisicell-0.0.20-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,530 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/6e/24/e0d9527cf63ef663dd39cb05add63e511267697e45e73d086bdbf6020512/trisicell-0.0.20-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,530 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2f/93/fe11b90918a4209cddf61733e2c7045280a75a361d8030bb42f6822c1847/trisicell-0.0.20-pp37-pypy37_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,531 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/66/fa/0cf1cbaabd9df2848cdc43014f875221f556bb10ccf96bc33032df736f0e/trisicell-0.0.20-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,531 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d8/e9/0a905a07667b2b284273601fe852ccd5098d7afa280e5f800d0488bba2e9/trisicell-0.0.20-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,531 Found link https://files.pythonhosted.org/packages/80/8f/5cd6e2543aa53fe39919c80fd76173bdb37cb178699120546b316119f78b/trisicell-0.0.20.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.0.20 2024-01-05T01:29:15,532 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/33/49/a197eaa50f21fe8410cdc124c190335e7be5ff686492601eb1f7261c7979/trisicell-0.0.21-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,532 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f8/97/570fd2f9a575ab00909f9664487b62843e31372b9733aa367e2186649554/trisicell-0.0.21-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,532 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/7e/b4/8a70a28c33fb18dd391ad89993da456cf5e652bd0bb29b20b8809c3f8736/trisicell-0.0.21-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,532 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/eb/1c/4c10230ff77851d054f097723acdf4a66e132aa736cc3c705a727ec6f9e2/trisicell-0.1.0-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,537 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c4/d3/1bcddcfd3ce3c43ff0fb1b8a433f74f3fecf1c3715b788b6abfebc1086e3/trisicell-0.1.0-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,537 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0b/ac/56179f89ddd9c3cf3fc6849ffdcb5f35d78de76c840a740dc3511109d985/trisicell-0.1.0-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,537 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/30/6f/bf5be03efc652f74b1f8524ff18d89cdf29e6164e2f07c4730ae68929558/trisicell-0.1.0-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,537 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/83/69/e02ad86d1b69212c45eaa10f4d92dffaa8f46d26344a144b21eb00b71a7c/trisicell-0.1.0-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,538 Found link https://files.pythonhosted.org/packages/66/f0/febc83c6d3ec0b2581b3da2cad09e7aecb4b9c9ef4c514269533d2e24f3d/trisicell-0.1.0.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.1.0 2024-01-05T01:29:15,538 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/f5/69/4e2c1069f4176c48abc5452fa946b7edec6e71bc27975a95fc97f52d983c/trisicell-0.1.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,540 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/a0/33/9e5fca7b580212cd645f02095495644af01d68bf4b28c02a599ef79e2e58/trisicell-0.1.1-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,540 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/24/37/13e115551b6163b6f7290c9b54a20fbaff16a16576d58d52491c5029198e/trisicell-0.1.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,541 Skipping link: No binaries permitted for trisicell: 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https://files.pythonhosted.org/packages/28/5a/c9fb3d16cf010332dd8160cb21447eda7793f0be19c3f615eada68ab241b/trisicell-0.2.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,546 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/d6/5d/3bd3c341b41b31c1c11f93cef0d0b2bdabd1c3eeac1385a137b55d552d60/trisicell-0.2.1-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,546 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/68/35/1b0abb114ca9f60bd35fb7144cac2e6d087d95662435d8a58bc6e01de89d/trisicell-0.2.1-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,547 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f1/bd/749862be7d2ef5e670f45b34ffc65c320edc1a4086586861772b0b416bd8/trisicell-0.2.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,547 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/aa/9b/4907f498332acde2ae777543087e8334c2036fa0477db8ccd185c6836ec6/trisicell-0.2.1-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,547 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b1/09/970b9c344cf22f521f8db3f3fd48c6ba001a4989c06a20d28f66141249eb/trisicell-0.2.1-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,547 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/27/4d/16d97713feb5b22dc403bf4604fddd80de70190501e0bd6e7e810cb6778c/trisicell-0.2.1-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,547 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/99/e5/c3ec3fd9029cd049b352ead5420226f318ab89261b74cd2f0cc0c9e8b0c6/trisicell-0.2.1-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,548 Found link https://files.pythonhosted.org/packages/38/bc/fc01229c47cd5bd5c5e92134b793f8846fb44fe04654a3ee296125d41973/trisicell-0.2.1.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.2.1 2024-01-05T01:29:15,548 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/2c/51/c9cbdb5c4ae35e5b829fecd6e63470252b645d6cc301347a08b611ccc0dd/trisicell-0.2.2-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,548 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e3/0e/0fd6c54fe3a5a332ac5a4cdccf328b9b753518f655ea3baca691d9b8cb80/trisicell-0.2.2-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,549 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c0/d5/5281f3c13ea3cab82a239def3e56f05c004ef253c83886d7dc474b9f774c/trisicell-0.2.2-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,549 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/31/7a/9d4576a44a96df35f6e9cca10c1385b373cec268de3e525c81695056d9a3/trisicell-0.2.2-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,549 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f4/76/d23ed76307c87a15e62776579e9ae983cfe034e10f1f7948ad4e717abb74/trisicell-0.2.2-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,549 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/0c/fd/82cb2f9badabaa6143a8d2a6b9cf0c65b6e90d432d931a9252cb895cd28f/trisicell-0.2.2-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,549 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/23/ca/5c55e2d89a42d1826aa6f0639a4e14c7873359dfad0175e9e4653bd16e96/trisicell-0.2.2-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,550 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/81/8a/d9e9632700274967ac0bfe8ca58f6ca2386ba5ba7d426ed1f5a044dad8ff/trisicell-0.2.2-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,550 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/8f/55/4180e701bc8ba8027976784b2642ad0d34aa19aa2b21fdd28b81b10c604a/trisicell-0.2.2-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,550 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c0/03/070d13f5038e3083d88d9acf8f1492868ec29b7773c3bafb073dea4c2883/trisicell-0.2.2-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,550 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/27/16/99447275dace4687a3c35cf1c6c00633086dd1d8d61b211db389b38d5293/trisicell-0.2.2-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,550 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e8/a3/3c114cfd5d009279f5fd7fecfe2738d57d8bb5723ea0ccaf228a1fb3bb25/trisicell-0.2.2-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,551 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c0/f1/baaaf6f4bc0575b921b43d8ae889b4bc59534ab4b08fcb940a0c1ae5715e/trisicell-0.2.2-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,551 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/de/4f/449d476a0a4c89a7fd6631425832fb6427b2a4fa97d3dfb6d260f41904c0/trisicell-0.2.2-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,551 Found link https://files.pythonhosted.org/packages/49/1b/9117ec01ed1bb7833b1ef3e7652185c6a0e7398a46319035456a9ff3e1be/trisicell-0.2.2.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.2.2 2024-01-05T01:29:15,552 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/69/da/216f46c2c713b88c68eaffa53c19c17112d9eef1f6069e028084307d4caa/trisicell-0.2.3-cp36-cp36m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,552 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b8/4c/f1503fad1b5fb18a7b3966a84a10041b812a25b586d926027124cea3a8a1/trisicell-0.2.3-cp36-cp36m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,552 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/21/2e/8e3c9cb0542a17bdefa6d363b2179372f033fe77b1431e355f805836d268/trisicell-0.2.3-cp36-cp36m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,552 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/f0/34/41c5c6ae2df1bacaecd0b727ee5126c80ad51683d5c95185a12bd15430ab/trisicell-0.2.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,552 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/37/1d/9bc80276f753bbeff4ebb10c9e4633425b1d7c1314783467100bcdac172a/trisicell-0.2.3-cp37-cp37m-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,552 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/3b/e6/35b58ea06b2a93d6e94b678f6ef700c9b72618c86ec41aea736273c08f37/trisicell-0.2.3-cp37-cp37m-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,553 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ec/0a/24074f85e5a41699e4d661264f13037753fc25862ce0b739fcbac753ff66/trisicell-0.2.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,553 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/4e/02/de1d7611efdef64eb94be6a4b117373162eda875b8f59bc999be43a637fb/trisicell-0.2.3-cp38-cp38-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,553 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c3/61/7ddb45c7d425ee9d87f923549e551cf87b27857489fbe8f11ad9aeaa2725/trisicell-0.2.3-cp38-cp38-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,553 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/ad/7c/b57f7b242a926f9d3e0d5fae04a55cd9b0353cc9f48eec67e7f282c089fe/trisicell-0.2.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,553 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/e2/8f/21ff211778e70fdca3810d9de8de95e705ce53c91a9f4a190f94bdde848c/trisicell-0.2.3-cp39-cp39-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,554 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/b9/eb/f9f3db7393b917b4057f26810ddedb1f639e290f5e34e4cbf199d5595707/trisicell-0.2.3-cp39-cp39-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,554 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/cd/ba/4d4da1dc00d7bb9211e7e9267b65237c21a512cbc39b3af72261c6a34534/trisicell-0.2.3-pp37-pypy37_pp73-manylinux_2_12_i686.manylinux2010_i686.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,554 Skipping link: No binaries permitted for trisicell: https://files.pythonhosted.org/packages/c6/09/85a11a73c41e1c14ff3571474d6cc21b8b98d16cfafdb46a3d529bb08580/trisicell-0.2.3-pp37-pypy37_pp73-manylinux_2_12_x86_64.manylinux2010_x86_64.whl (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,555 Found link https://files.pythonhosted.org/packages/02/bb/9a7d54ba088771a7fd849b68126beb5b8c95a6812777f27acada198d7abb/trisicell-0.2.3.tar.gz (from https://pypi.org/simple/trisicell/) (requires-python:>=3.6), version: 0.2.3 2024-01-05T01:29:15,555 Fetching project page and analyzing links: https://www.piwheels.org/simple/trisicell/ 2024-01-05T01:29:15,555 Getting page https://www.piwheels.org/simple/trisicell/ 2024-01-05T01:29:15,556 Found index url https://www.piwheels.org/simple/ 2024-01-05T01:29:15,619 Fetched page https://www.piwheels.org/simple/trisicell/ as text/html 2024-01-05T01:29:15,631 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.3-cp37-cp37m-linux_armv6l.whl#sha256=aa69e14dc72b96e6bd2b8832d16ca2f5e9294741bb883c79c57729a34b83068b (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,632 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.3-cp37-cp37m-linux_armv7l.whl#sha256=aa69e14dc72b96e6bd2b8832d16ca2f5e9294741bb883c79c57729a34b83068b (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,632 Skipping link: No binaries permitted for trisicell: 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https://www.piwheels.org/simple/trisicell/trisicell-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=597af8a51c727fb20d17b79c98fdc1faa9519e43b90279220543fa65197e056a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,633 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=597af8a51c727fb20d17b79c98fdc1faa9519e43b90279220543fa65197e056a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,634 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=00ba5c58632ed9d2f2ebedf98081dbf9f38375b41b8e599a35e1e9132cb4834a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,634 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=00ba5c58632ed9d2f2ebedf98081dbf9f38375b41b8e599a35e1e9132cb4834a (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,634 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.1.1-cp37-cp37m-linux_armv6l.whl#sha256=e74653a1ef66937894f29971b74a1cc1d70045d234acd164911bcec67e2952e8 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,634 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.1.1-cp37-cp37m-linux_armv7l.whl#sha256=e74653a1ef66937894f29971b74a1cc1d70045d234acd164911bcec67e2952e8 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,634 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.1.1-cp39-cp39-linux_armv6l.whl#sha256=ee93293a4ce5e1ebe82b4e1becf6d975bce20d216b825ccd5f308cbf3f4fc4ff (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,634 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.1.1-cp39-cp39-linux_armv7l.whl#sha256=ee93293a4ce5e1ebe82b4e1becf6d975bce20d216b825ccd5f308cbf3f4fc4ff (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,635 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.1.0-cp37-cp37m-linux_armv6l.whl#sha256=6301b968acdb272d9ee2fb01c5899e872d143b5bda79bbfb2818870ba901e29f (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,635 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.1.0-cp37-cp37m-linux_armv7l.whl#sha256=6301b968acdb272d9ee2fb01c5899e872d143b5bda79bbfb2818870ba901e29f (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,635 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.21-cp37-cp37m-linux_armv6l.whl#sha256=078798ade8f12ac3b557cb210efe34fb6475f13e6129210bf3f85d8217cc1805 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,635 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.21-cp37-cp37m-linux_armv7l.whl#sha256=078798ade8f12ac3b557cb210efe34fb6475f13e6129210bf3f85d8217cc1805 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,636 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.20-cp37-cp37m-linux_armv6l.whl#sha256=e7a777af6cf3d91b731ef0875a29580fd49c7c27700aebee550d7dd6b8102e4c (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,636 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.20-cp37-cp37m-linux_armv7l.whl#sha256=e7a777af6cf3d91b731ef0875a29580fd49c7c27700aebee550d7dd6b8102e4c (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,636 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.19-cp37-cp37m-linux_armv6l.whl#sha256=10ad6684da70f6e91695da430ff8160d6552a2aee6c02a20ce70f6ed6d2e2032 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,636 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.19-cp37-cp37m-linux_armv7l.whl#sha256=10ad6684da70f6e91695da430ff8160d6552a2aee6c02a20ce70f6ed6d2e2032 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,636 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.18-cp37-cp37m-linux_armv6l.whl#sha256=1020abcca11f1faa9f8cb0f44d3704a26ed794c8455a607a69cc6ee04ac63aa9 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,637 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.18-cp37-cp37m-linux_armv7l.whl#sha256=1020abcca11f1faa9f8cb0f44d3704a26ed794c8455a607a69cc6ee04ac63aa9 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,637 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.17-cp37-cp37m-linux_armv6l.whl#sha256=14d3765fb838b5d7dc5c91370d01a70ca76e168ffbd75c603ee2c534d4dedc9f (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,637 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.17-cp37-cp37m-linux_armv7l.whl#sha256=14d3765fb838b5d7dc5c91370d01a70ca76e168ffbd75c603ee2c534d4dedc9f (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,637 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.15-cp37-cp37m-linux_armv6l.whl#sha256=66b1ea8e75e9269ef4d9a4fcc7094368b213193ca7b700bd834ab49f51112233 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,637 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.15-cp37-cp37m-linux_armv7l.whl#sha256=66b1ea8e75e9269ef4d9a4fcc7094368b213193ca7b700bd834ab49f51112233 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,637 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.14-cp37-cp37m-linux_armv6l.whl#sha256=eca54393ec3f5b01375af2a46f2e5c8e00aaed58dfdacd3582faaa7d023d5d32 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,638 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.14-cp37-cp37m-linux_armv7l.whl#sha256=eca54393ec3f5b01375af2a46f2e5c8e00aaed58dfdacd3582faaa7d023d5d32 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,638 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.13-cp37-cp37m-linux_armv6l.whl#sha256=b538af8cb5159e34fd8aaf08fb00ac3a8ada7be95279ce1565fad68ef8e1f545 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,638 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.13-cp37-cp37m-linux_armv7l.whl#sha256=b538af8cb5159e34fd8aaf08fb00ac3a8ada7be95279ce1565fad68ef8e1f545 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,638 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.12-cp37-cp37m-linux_armv6l.whl#sha256=be47193a781f646cf5d624f2466e56352ae1c0109ae58882df17243b38f741b7 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,638 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.12-cp37-cp37m-linux_armv7l.whl#sha256=be47193a781f646cf5d624f2466e56352ae1c0109ae58882df17243b38f741b7 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,639 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.11-cp37-cp37m-linux_armv6l.whl#sha256=114c2ab469dd69016bd12069f65fa9fe336eca53946100f7cf84d03af6c45ab0 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,639 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.11-cp37-cp37m-linux_armv7l.whl#sha256=114c2ab469dd69016bd12069f65fa9fe336eca53946100f7cf84d03af6c45ab0 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,639 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.10-cp37-cp37m-linux_armv6l.whl#sha256=4f26739081fad7d8eb0337285a5d72579f019cf3ce413af89dc37c17bbfb4bab (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,639 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.10-cp37-cp37m-linux_armv7l.whl#sha256=4f26739081fad7d8eb0337285a5d72579f019cf3ce413af89dc37c17bbfb4bab (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,639 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.3-py3-none-any.whl#sha256=1673dfd550aa8b6f6fbb7ab02f404f6bc0cbc9c8ef6350da9101e756f50d1172 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,640 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.2-py3-none-any.whl#sha256=90e36d6a009270d45a57c8519ffaebd1c79ba4037d2f68abf2d17af9263fcd38 (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,640 Skipping link: No binaries permitted for trisicell: https://www.piwheels.org/simple/trisicell/trisicell-0.0.1-py3-none-any.whl#sha256=9bd9a3c4d1224294fe104ca92f349bd257ccb36c21f2210f4fbedb000b0736fc (from https://www.piwheels.org/simple/trisicell/) (requires-python:>=3.6) 2024-01-05T01:29:15,640 Skipping link: not a file: https://www.piwheels.org/simple/trisicell/ 2024-01-05T01:29:15,640 Skipping link: not a file: https://pypi.org/simple/trisicell/ 2024-01-05T01:29:15,660 Given no hashes to check 1 links for project 'trisicell': discarding no candidates 2024-01-05T01:29:15,677 Collecting trisicell==0.2.3 2024-01-05T01:29:15,679 Created temporary directory: /tmp/pip-unpack-qen9d25r 2024-01-05T01:29:15,723 Downloading trisicell-0.2.3.tar.gz (21.8 MB) 2024-01-05T01:29:19,040 Added trisicell==0.2.3 from https://files.pythonhosted.org/packages/02/bb/9a7d54ba088771a7fd849b68126beb5b8c95a6812777f27acada198d7abb/trisicell-0.2.3.tar.gz to build tracker '/tmp/pip-build-tracker-4qc96r2f' 2024-01-05T01:29:19,046 Created temporary directory: /tmp/pip-build-env-gt9tiiyz 2024-01-05T01:29:19,056 Installing build dependencies: started 2024-01-05T01:29:19,057 Running command pip subprocess to install build dependencies 2024-01-05T01:29:20,254 Using pip 23.3 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2024-01-05T01:29:20,792 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-05T01:29:22,233 Collecting setuptools 2024-01-05T01:29:22,250 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl (819 kB) 2024-01-05T01:29:22,599 Collecting setuptools_scm 2024-01-05T01:29:22,624 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2024-01-05T01:29:22,859 Collecting wheel 2024-01-05T01:29:23,091 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-01-05T01:29:24,017 Collecting numpy 2024-01-05T01:29:24,033 Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.2-cp39-cp39-linux_armv7l.whl (19.4 MB) 2024-01-05T01:29:25,963 Collecting Cython 2024-01-05T01:29:25,980 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.7-cp39-cp39-linux_armv7l.whl (10.7 MB) 2024-01-05T01:29:26,674 Collecting packaging>=20 (from setuptools_scm) 2024-01-05T01:29:26,691 Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB) 2024-01-05T01:29:26,816 Collecting typing-extensions (from setuptools_scm) 2024-01-05T01:29:26,832 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.9.0-py3-none-any.whl (32 kB) 2024-01-05T01:29:26,943 Collecting tomli>=1 (from setuptools_scm) 2024-01-05T01:29:26,958 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2024-01-05T01:29:28,856 Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, numpy, Cython, setuptools_scm 2024-01-05T01:29:29,081 Creating /tmp/pip-build-env-gt9tiiyz/overlay/bin 2024-01-05T01:29:29,083 changing mode of /tmp/pip-build-env-gt9tiiyz/overlay/bin/wheel to 755 2024-01-05T01:29:39,116 changing mode of /tmp/pip-build-env-gt9tiiyz/overlay/bin/f2py to 755 2024-01-05T01:29:42,545 changing mode of /tmp/pip-build-env-gt9tiiyz/overlay/bin/cygdb to 755 2024-01-05T01:29:42,547 changing mode of /tmp/pip-build-env-gt9tiiyz/overlay/bin/cython to 755 2024-01-05T01:29:42,550 changing mode of /tmp/pip-build-env-gt9tiiyz/overlay/bin/cythonize to 755 2024-01-05T01:29:42,769 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2024-01-05T01:29:42,769 scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.26.2 which is incompatible. 2024-01-05T01:29:42,770 Successfully installed Cython-3.0.7 numpy-1.26.2 packaging-23.2 setuptools-69.0.3 setuptools_scm-8.0.4 tomli-2.0.1 typing-extensions-4.9.0 wheel-0.42.0 2024-01-05T01:29:42,952 WARNING: There was an error checking the latest version of pip. 2024-01-05T01:29:43,422 Installing build dependencies: finished with status 'done' 2024-01-05T01:29:43,427 Getting requirements to build wheel: started 2024-01-05T01:29:43,428 Running command Getting requirements to build wheel 2024-01-05T01:29:44,000 Getting requirements to build wheel: finished with status 'done' 2024-01-05T01:29:44,013 Created temporary directory: /tmp/pip-modern-metadata-vvqry6sm 2024-01-05T01:29:44,016 Preparing metadata (pyproject.toml): started 2024-01-05T01:29:44,017 Running command Preparing metadata (pyproject.toml) 2024-01-05T01:29:44,502 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'email' 2024-01-05T01:29:44,503 warnings.warn(msg) 2024-01-05T01:29:44,596 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools_scm/_integration/setuptools.py:90: UserWarning: version of trisicell already set 2024-01-05T01:29:44,596 warnings.warn(f"version of {dist_name} already set") 2024-01-05T01:29:44,650 running dist_info 2024-01-05T01:29:44,672 creating /tmp/pip-modern-metadata-vvqry6sm/trisicell.egg-info 2024-01-05T01:29:44,679 writing /tmp/pip-modern-metadata-vvqry6sm/trisicell.egg-info/PKG-INFO 2024-01-05T01:29:44,692 writing dependency_links to /tmp/pip-modern-metadata-vvqry6sm/trisicell.egg-info/dependency_links.txt 2024-01-05T01:29:44,694 writing entry points to /tmp/pip-modern-metadata-vvqry6sm/trisicell.egg-info/entry_points.txt 2024-01-05T01:29:44,701 writing requirements to /tmp/pip-modern-metadata-vvqry6sm/trisicell.egg-info/requires.txt 2024-01-05T01:29:44,703 writing top-level names to /tmp/pip-modern-metadata-vvqry6sm/trisicell.egg-info/top_level.txt 2024-01-05T01:29:44,704 writing manifest file '/tmp/pip-modern-metadata-vvqry6sm/trisicell.egg-info/SOURCES.txt' 2024-01-05T01:29:44,978 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-01-05T01:29:44,988 reading manifest file '/tmp/pip-modern-metadata-vvqry6sm/trisicell.egg-info/SOURCES.txt' 2024-01-05T01:29:44,991 reading manifest template 'MANIFEST.in' 2024-01-05T01:29:44,993 no previously-included directories found matching 'docs' 2024-01-05T01:29:44,993 no previously-included directories found matching '.scripts' 2024-01-05T01:29:44,994 no previously-included directories found matching '.github' 2024-01-05T01:29:44,996 adding license file 'LICENSE' 2024-01-05T01:29:45,003 writing manifest file '/tmp/pip-modern-metadata-vvqry6sm/trisicell.egg-info/SOURCES.txt' 2024-01-05T01:29:45,005 creating '/tmp/pip-modern-metadata-vvqry6sm/trisicell-0.2.3.dist-info' 2024-01-05T01:29:45,202 Preparing metadata (pyproject.toml): finished with status 'done' 2024-01-05T01:29:45,209 Source in /tmp/pip-wheel-qe7bgnzy/trisicell_24597e1410544b81b1a36ff53e3c7819 has version 0.2.3, which satisfies requirement trisicell==0.2.3 from https://files.pythonhosted.org/packages/02/bb/9a7d54ba088771a7fd849b68126beb5b8c95a6812777f27acada198d7abb/trisicell-0.2.3.tar.gz 2024-01-05T01:29:45,210 Removed trisicell==0.2.3 from https://files.pythonhosted.org/packages/02/bb/9a7d54ba088771a7fd849b68126beb5b8c95a6812777f27acada198d7abb/trisicell-0.2.3.tar.gz from build tracker '/tmp/pip-build-tracker-4qc96r2f' 2024-01-05T01:29:45,216 Created temporary directory: /tmp/pip-unpack-3_pxh973 2024-01-05T01:29:45,217 Created temporary directory: /tmp/pip-unpack-bqaie3bz 2024-01-05T01:29:45,303 Building wheels for collected packages: trisicell 2024-01-05T01:29:45,308 Created temporary directory: /tmp/pip-wheel-rfvd8s1w 2024-01-05T01:29:45,308 Destination directory: /tmp/pip-wheel-rfvd8s1w 2024-01-05T01:29:45,310 Building wheel for trisicell (pyproject.toml): started 2024-01-05T01:29:45,311 Running command Building wheel for trisicell (pyproject.toml) 2024-01-05T01:29:45,774 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'email' 2024-01-05T01:29:45,775 warnings.warn(msg) 2024-01-05T01:29:45,840 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools_scm/_integration/setuptools.py:90: UserWarning: version of trisicell already set 2024-01-05T01:29:45,840 warnings.warn(f"version of {dist_name} already set") 2024-01-05T01:29:45,947 running bdist_wheel 2024-01-05T01:29:46,167 running build 2024-01-05T01:29:46,168 running build_py 2024-01-05T01:29:46,179 creating build 2024-01-05T01:29:46,179 creating build/lib.linux-armv7l-cpython-39 2024-01-05T01:29:46,180 creating build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,181 copying tests/test_datasets.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,183 copying tests/test_tl_scores.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,184 copying tests/test_pl.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,186 copying tests/test_tl_partition_function.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,188 copying tests/test_tl_solvers.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,190 copying tests/test_io.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,192 copying tests/test_pp.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,195 copying tests/__init__.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,197 copying tests/test_ul.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,200 copying tests/_helpers.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,202 copying tests/test_commands.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,206 copying tests/test_tl_solvers_tmp.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,210 copying tests/test_logging.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,213 copying tests/test_tl_consensus.py -> build/lib.linux-armv7l-cpython-39/tests 2024-01-05T01:29:46,218 creating build/lib.linux-armv7l-cpython-39/trisicell 2024-01-05T01:29:46,220 copying trisicell/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell 2024-01-05T01:29:46,225 creating build/lib.linux-armv7l-cpython-39/trisicell/settings 2024-01-05T01:29:46,227 copying trisicell/settings/_settings.py -> build/lib.linux-armv7l-cpython-39/trisicell/settings 2024-01-05T01:29:46,232 copying trisicell/settings/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/settings 2024-01-05T01:29:46,238 creating build/lib.linux-armv7l-cpython-39/trisicell/tl 2024-01-05T01:29:46,240 copying trisicell/tl/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl 2024-01-05T01:29:46,247 creating build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,249 copying trisicell/commands/_consensus.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,254 copying trisicell/commands/_trees.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,259 copying trisicell/commands/_grmt.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,264 copying trisicell/commands/_sphyr.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,269 copying trisicell/commands/_score.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,275 copying trisicell/commands/trisicell.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,281 copying trisicell/commands/_siclonefit.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,286 copying trisicell/commands/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,291 copying trisicell/commands/_partf.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,297 copying trisicell/commands/_huntress.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,304 copying trisicell/commands/_search.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,308 copying trisicell/commands/_scite.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,310 copying trisicell/commands/_onconem.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,312 copying trisicell/commands/_scistree.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,314 copying trisicell/commands/_bnb.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,316 copying trisicell/commands/_gpps.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,319 copying trisicell/commands/_mcalling.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,322 copying trisicell/commands/_phiscs.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,325 copying trisicell/commands/_booster.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands 2024-01-05T01:29:46,330 creating build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,332 copying trisicell/external/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,546 copying trisicell/external/_mp3.py -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,548 copying trisicell/external/_betabinom.py -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,551 creating build/lib.linux-armv7l-cpython-39/trisicell/logging 2024-01-05T01:29:46,552 copying trisicell/logging/_logging.py -> build/lib.linux-armv7l-cpython-39/trisicell/logging 2024-01-05T01:29:46,555 copying trisicell/logging/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/logging 2024-01-05T01:29:46,557 creating build/lib.linux-armv7l-cpython-39/trisicell/pl 2024-01-05T01:29:46,558 copying trisicell/pl/_data.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2024-01-05T01:29:46,560 copying trisicell/pl/_trees.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2024-01-05T01:29:46,562 copying trisicell/pl/_helper.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2024-01-05T01:29:46,564 copying trisicell/pl/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/pl 2024-01-05T01:29:46,566 creating build/lib.linux-armv7l-cpython-39/trisicell/io 2024-01-05T01:29:46,567 copying trisicell/io/_tree.py -> build/lib.linux-armv7l-cpython-39/trisicell/io 2024-01-05T01:29:46,569 copying trisicell/io/_genotype.py -> build/lib.linux-armv7l-cpython-39/trisicell/io 2024-01-05T01:29:46,571 copying trisicell/io/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/io 2024-01-05T01:29:46,573 creating build/lib.linux-armv7l-cpython-39/trisicell/ul 2024-01-05T01:29:46,574 copying trisicell/ul/_hclustering.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2024-01-05T01:29:46,577 copying trisicell/ul/_trees.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2024-01-05T01:29:46,579 copying trisicell/ul/_servers.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2024-01-05T01:29:46,581 copying trisicell/ul/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2024-01-05T01:29:46,582 copying trisicell/ul/_utils.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2024-01-05T01:29:46,584 copying trisicell/ul/_packages.py -> build/lib.linux-armv7l-cpython-39/trisicell/ul 2024-01-05T01:29:46,587 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets 2024-01-05T01:29:46,588 copying trisicell/datasets/_datasets.py -> build/lib.linux-armv7l-cpython-39/trisicell/datasets 2024-01-05T01:29:46,590 copying trisicell/datasets/_simulate.py -> build/lib.linux-armv7l-cpython-39/trisicell/datasets 2024-01-05T01:29:46,592 copying trisicell/datasets/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/datasets 2024-01-05T01:29:46,595 creating build/lib.linux-armv7l-cpython-39/trisicell/pp 2024-01-05T01:29:46,596 copying trisicell/pp/_tree.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2024-01-05T01:29:46,598 copying trisicell/pp/_binary.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2024-01-05T01:29:46,600 copying trisicell/pp/_readcount.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2024-01-05T01:29:46,602 copying trisicell/pp/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2024-01-05T01:29:46,604 copying trisicell/pp/_bifiltering.py -> build/lib.linux-armv7l-cpython-39/trisicell/pp 2024-01-05T01:29:46,606 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2024-01-05T01:29:46,607 copying trisicell/tl/score/_others.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2024-01-05T01:29:46,610 copying trisicell/tl/score/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2024-01-05T01:29:46,611 copying trisicell/tl/score/_ours.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/score 2024-01-05T01:29:46,614 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2024-01-05T01:29:46,615 copying trisicell/tl/partition_function/_partition_function.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2024-01-05T01:29:46,617 copying trisicell/tl/partition_function/_pf.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2024-01-05T01:29:46,619 copying trisicell/tl/partition_function/_clt_sampler.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2024-01-05T01:29:46,621 copying trisicell/tl/partition_function/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function 2024-01-05T01:29:46,623 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/cna 2024-01-05T01:29:46,624 copying trisicell/tl/cna/_cna.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/cna 2024-01-05T01:29:46,627 copying trisicell/tl/cna/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/cna 2024-01-05T01:29:46,631 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,632 copying trisicell/tl/solver/_sciphi.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,634 copying trisicell/tl/solver/_grmt.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,636 copying trisicell/tl/solver/_sasc.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,637 copying trisicell/tl/solver/_dendro.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,639 copying trisicell/tl/solver/_sphyr.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,641 copying trisicell/tl/solver/_sbm.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,643 copying trisicell/tl/solver/_cellphy.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,645 copying trisicell/tl/solver/_siclonefit.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,647 copying trisicell/tl/solver/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,648 copying trisicell/tl/solver/_scelestial.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,650 copying trisicell/tl/solver/_scite.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,652 copying trisicell/tl/solver/_onconem.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,654 copying trisicell/tl/solver/_scistree.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,657 copying trisicell/tl/solver/_bnb.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,659 copying trisicell/tl/solver/_gpps.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,661 copying trisicell/tl/solver/_cardelino.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,663 copying trisicell/tl/solver/_phiscs.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver 2024-01-05T01:29:46,666 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2024-01-05T01:29:46,667 copying trisicell/tl/consensus/_consensus.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2024-01-05T01:29:46,669 copying trisicell/tl/consensus/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2024-01-05T01:29:46,671 copying trisicell/tl/consensus/_consensus_day.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus 2024-01-05T01:29:46,673 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch 2024-01-05T01:29:46,674 copying trisicell/tl/fitch/_fitch.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch 2024-01-05T01:29:46,676 copying trisicell/tl/fitch/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch 2024-01-05T01:29:46,678 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress 2024-01-05T01:29:46,679 copying trisicell/tl/solver/huntress/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress 2024-01-05T01:29:46,681 copying trisicell/tl/solver/huntress/_huntress.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress 2024-01-05T01:29:46,684 creating build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2024-01-05T01:29:46,685 copying trisicell/tl/solver/booster/_dependencies.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2024-01-05T01:29:46,688 copying trisicell/tl/solver/booster/_reconstruct_big_tree.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2024-01-05T01:29:46,691 copying trisicell/tl/solver/booster/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2024-01-05T01:29:46,693 copying trisicell/tl/solver/booster/_subsamples.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2024-01-05T01:29:46,695 copying trisicell/tl/solver/booster/_booster.py -> build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster 2024-01-05T01:29:46,699 creating build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,700 copying trisicell/commands/mcalling/s06jointcalling.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,702 copying trisicell/commands/mcalling/s07merging.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,704 copying trisicell/commands/mcalling/z03clean.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,706 copying trisicell/commands/mcalling/s10velocitying.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,708 copying trisicell/commands/mcalling/s01indexing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,710 copying trisicell/commands/mcalling/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,712 copying trisicell/commands/mcalling/s02mapping.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,714 copying trisicell/commands/mcalling/s09expressing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,716 copying trisicell/commands/mcalling/s03indexing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,718 copying trisicell/commands/mcalling/s05calling.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,720 copying trisicell/commands/mcalling/z01status.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,722 copying trisicell/commands/mcalling/s04mapping.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,725 copying trisicell/commands/mcalling/s08annotating.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,727 copying trisicell/commands/mcalling/z02matrixing.py -> build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling 2024-01-05T01:29:46,731 creating build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2024-01-05T01:29:46,732 copying trisicell/external/gpps/_gpps_hc.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2024-01-05T01:29:46,734 copying trisicell/external/gpps/_utils_hc.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2024-01-05T01:29:46,737 copying trisicell/external/gpps/_nh2lgf.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2024-01-05T01:29:46,739 copying trisicell/external/gpps/__init__.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2024-01-05T01:29:46,741 copying trisicell/external/gpps/_utils_ilp.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2024-01-05T01:29:46,743 copying trisicell/external/gpps/_gpps_ilp.py -> build/lib.linux-armv7l-cpython-39/trisicell/external/gpps 2024-01-05T01:29:46,746 running egg_info 2024-01-05T01:29:46,755 writing trisicell.egg-info/PKG-INFO 2024-01-05T01:29:46,774 writing dependency_links to trisicell.egg-info/dependency_links.txt 2024-01-05T01:29:46,776 writing entry points to trisicell.egg-info/entry_points.txt 2024-01-05T01:29:46,787 writing requirements to trisicell.egg-info/requires.txt 2024-01-05T01:29:46,788 writing top-level names to trisicell.egg-info/top_level.txt 2024-01-05T01:29:46,847 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-01-05T01:29:46,856 reading manifest file 'trisicell.egg-info/SOURCES.txt' 2024-01-05T01:29:46,874 reading manifest template 'MANIFEST.in' 2024-01-05T01:29:46,876 no previously-included directories found matching '.scripts' 2024-01-05T01:29:46,877 no previously-included directories found matching '.github' 2024-01-05T01:29:46,878 adding license file 'LICENSE' 2024-01-05T01:29:46,891 writing manifest file 'trisicell.egg-info/SOURCES.txt' 2024-01-05T01:29:46,896 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'trisicell.datasets.data' is absent from the `packages` configuration. 2024-01-05T01:29:46,896 !! 2024-01-05T01:29:46,896 ******************************************************************************** 2024-01-05T01:29:46,896 ############################ 2024-01-05T01:29:46,896 # Package would be ignored # 2024-01-05T01:29:46,897 ############################ 2024-01-05T01:29:46,897 Python recognizes 'trisicell.datasets.data' as an importable package[^1], 2024-01-05T01:29:46,897 but it is absent from setuptools' `packages` configuration. 2024-01-05T01:29:46,897 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-05T01:29:46,897 package, please make sure that 'trisicell.datasets.data' is explicitly added 2024-01-05T01:29:46,897 to the `packages` configuration field. 2024-01-05T01:29:46,898 Alternatively, you can also rely on setuptools' discovery methods 2024-01-05T01:29:46,898 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-05T01:29:46,898 instead of `find_packages(...)`/`find:`). 2024-01-05T01:29:46,898 You can read more about "package discovery" on setuptools documentation page: 2024-01-05T01:29:46,898 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-05T01:29:46,898 If you don't want 'trisicell.datasets.data' to be distributed and are 2024-01-05T01:29:46,899 already explicitly excluding 'trisicell.datasets.data' via 2024-01-05T01:29:46,899 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-05T01:29:46,899 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-05T01:29:46,899 combination with a more fine grained `package-data` configuration. 2024-01-05T01:29:46,899 You can read more about "package data files" on setuptools documentation page: 2024-01-05T01:29:46,899 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-05T01:29:46,900 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-05T01:29:46,900 even if it does not contain any `.py` files. 2024-01-05T01:29:46,900 On the other hand, currently there is no concept of package data 2024-01-05T01:29:46,900 directory, all directories are treated like packages. 2024-01-05T01:29:46,900 ******************************************************************************** 2024-01-05T01:29:46,900 !! 2024-01-05T01:29:46,900 check.warn(importable) 2024-01-05T01:29:46,901 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'trisicell.datasets.real' is absent from the `packages` configuration. 2024-01-05T01:29:46,901 !! 2024-01-05T01:29:46,901 ******************************************************************************** 2024-01-05T01:29:46,901 ############################ 2024-01-05T01:29:46,901 # Package would be ignored # 2024-01-05T01:29:46,901 ############################ 2024-01-05T01:29:46,902 Python recognizes 'trisicell.datasets.real' as an importable package[^1], 2024-01-05T01:29:46,902 but it is absent from setuptools' `packages` configuration. 2024-01-05T01:29:46,902 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-05T01:29:46,902 package, please make sure that 'trisicell.datasets.real' is explicitly added 2024-01-05T01:29:46,902 to the `packages` configuration field. 2024-01-05T01:29:46,902 Alternatively, you can also rely on setuptools' discovery methods 2024-01-05T01:29:46,902 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-05T01:29:46,903 instead of `find_packages(...)`/`find:`). 2024-01-05T01:29:46,903 You can read more about "package discovery" on setuptools documentation page: 2024-01-05T01:29:46,903 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-05T01:29:46,903 If you don't want 'trisicell.datasets.real' to be distributed and are 2024-01-05T01:29:46,903 already explicitly excluding 'trisicell.datasets.real' via 2024-01-05T01:29:46,903 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-05T01:29:46,904 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-05T01:29:46,904 combination with a more fine grained `package-data` configuration. 2024-01-05T01:29:46,904 You can read more about "package data files" on setuptools documentation page: 2024-01-05T01:29:46,904 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-05T01:29:46,904 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-05T01:29:46,905 even if it does not contain any `.py` files. 2024-01-05T01:29:46,905 On the other hand, currently there is no concept of package data 2024-01-05T01:29:46,905 directory, all directories are treated like packages. 2024-01-05T01:29:46,905 ******************************************************************************** 2024-01-05T01:29:46,905 !! 2024-01-05T01:29:46,905 check.warn(importable) 2024-01-05T01:29:46,905 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'trisicell.datasets.test' is absent from the `packages` configuration. 2024-01-05T01:29:46,906 !! 2024-01-05T01:29:46,906 ******************************************************************************** 2024-01-05T01:29:46,906 ############################ 2024-01-05T01:29:46,906 # Package would be ignored # 2024-01-05T01:29:46,906 ############################ 2024-01-05T01:29:46,906 Python recognizes 'trisicell.datasets.test' as an importable package[^1], 2024-01-05T01:29:46,906 but it is absent from setuptools' `packages` configuration. 2024-01-05T01:29:46,907 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-05T01:29:46,907 package, please make sure that 'trisicell.datasets.test' is explicitly added 2024-01-05T01:29:46,907 to the `packages` configuration field. 2024-01-05T01:29:46,907 Alternatively, you can also rely on setuptools' discovery methods 2024-01-05T01:29:46,907 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-05T01:29:46,907 instead of `find_packages(...)`/`find:`). 2024-01-05T01:29:46,907 You can read more about "package discovery" on setuptools documentation page: 2024-01-05T01:29:46,908 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-05T01:29:46,908 If you don't want 'trisicell.datasets.test' to be distributed and are 2024-01-05T01:29:46,908 already explicitly excluding 'trisicell.datasets.test' via 2024-01-05T01:29:46,908 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-05T01:29:46,908 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-05T01:29:46,908 combination with a more fine grained `package-data` configuration. 2024-01-05T01:29:46,909 You can read more about "package data files" on setuptools documentation page: 2024-01-05T01:29:46,909 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-05T01:29:46,909 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-05T01:29:46,909 even if it does not contain any `.py` files. 2024-01-05T01:29:46,910 On the other hand, currently there is no concept of package data 2024-01-05T01:29:46,910 directory, all directories are treated like packages. 2024-01-05T01:29:46,910 ******************************************************************************** 2024-01-05T01:29:46,910 !! 2024-01-05T01:29:46,910 check.warn(importable) 2024-01-05T01:29:46,910 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'trisicell.datasets.test.consensus' is absent from the `packages` configuration. 2024-01-05T01:29:46,911 !! 2024-01-05T01:29:46,911 ******************************************************************************** 2024-01-05T01:29:46,911 ############################ 2024-01-05T01:29:46,911 # Package would be ignored # 2024-01-05T01:29:46,911 ############################ 2024-01-05T01:29:46,911 Python recognizes 'trisicell.datasets.test.consensus' as an importable package[^1], 2024-01-05T01:29:46,911 but it is absent from setuptools' `packages` configuration. 2024-01-05T01:29:46,912 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-05T01:29:46,912 package, please make sure that 'trisicell.datasets.test.consensus' is explicitly added 2024-01-05T01:29:46,912 to the `packages` configuration field. 2024-01-05T01:29:46,912 Alternatively, you can also rely on setuptools' discovery methods 2024-01-05T01:29:46,912 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-05T01:29:46,912 instead of `find_packages(...)`/`find:`). 2024-01-05T01:29:46,912 You can read more about "package discovery" on setuptools documentation page: 2024-01-05T01:29:46,913 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-05T01:29:46,913 If you don't want 'trisicell.datasets.test.consensus' to be distributed and are 2024-01-05T01:29:46,913 already explicitly excluding 'trisicell.datasets.test.consensus' via 2024-01-05T01:29:46,913 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-05T01:29:46,913 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-05T01:29:46,913 combination with a more fine grained `package-data` configuration. 2024-01-05T01:29:46,914 You can read more about "package data files" on setuptools documentation page: 2024-01-05T01:29:46,914 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-05T01:29:46,914 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-05T01:29:46,914 even if it does not contain any `.py` files. 2024-01-05T01:29:46,914 On the other hand, currently there is no concept of package data 2024-01-05T01:29:46,914 directory, all directories are treated like packages. 2024-01-05T01:29:46,914 ******************************************************************************** 2024-01-05T01:29:46,915 !! 2024-01-05T01:29:46,915 check.warn(importable) 2024-01-05T01:29:46,915 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'trisicell.datasets.test.mcalling' is absent from the `packages` configuration. 2024-01-05T01:29:46,915 !! 2024-01-05T01:29:46,915 ******************************************************************************** 2024-01-05T01:29:46,915 ############################ 2024-01-05T01:29:46,916 # Package would be ignored # 2024-01-05T01:29:46,916 ############################ 2024-01-05T01:29:46,916 Python recognizes 'trisicell.datasets.test.mcalling' as an importable package[^1], 2024-01-05T01:29:46,916 but it is absent from setuptools' `packages` configuration. 2024-01-05T01:29:46,916 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-05T01:29:46,916 package, please make sure that 'trisicell.datasets.test.mcalling' is explicitly added 2024-01-05T01:29:46,916 to the `packages` configuration field. 2024-01-05T01:29:46,917 Alternatively, you can also rely on setuptools' discovery methods 2024-01-05T01:29:46,917 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-05T01:29:46,917 instead of `find_packages(...)`/`find:`). 2024-01-05T01:29:46,917 You can read more about "package discovery" on setuptools documentation page: 2024-01-05T01:29:46,917 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-05T01:29:46,918 If you don't want 'trisicell.datasets.test.mcalling' to be distributed and are 2024-01-05T01:29:46,918 already explicitly excluding 'trisicell.datasets.test.mcalling' via 2024-01-05T01:29:46,918 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-05T01:29:46,918 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-05T01:29:46,918 combination with a more fine grained `package-data` configuration. 2024-01-05T01:29:46,918 You can read more about "package data files" on setuptools documentation page: 2024-01-05T01:29:46,919 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-05T01:29:46,919 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-05T01:29:46,919 even if it does not contain any `.py` files. 2024-01-05T01:29:46,919 On the other hand, currently there is no concept of package data 2024-01-05T01:29:46,919 directory, all directories are treated like packages. 2024-01-05T01:29:46,920 ******************************************************************************** 2024-01-05T01:29:46,920 !! 2024-01-05T01:29:46,920 check.warn(importable) 2024-01-05T01:29:46,920 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'trisicell.external.mltd' is absent from the `packages` configuration. 2024-01-05T01:29:46,920 !! 2024-01-05T01:29:46,920 ******************************************************************************** 2024-01-05T01:29:46,920 ############################ 2024-01-05T01:29:46,921 # Package would be ignored # 2024-01-05T01:29:46,921 ############################ 2024-01-05T01:29:46,921 Python recognizes 'trisicell.external.mltd' as an importable package[^1], 2024-01-05T01:29:46,921 but it is absent from setuptools' `packages` configuration. 2024-01-05T01:29:46,921 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-05T01:29:46,921 package, please make sure that 'trisicell.external.mltd' is explicitly added 2024-01-05T01:29:46,921 to the `packages` configuration field. 2024-01-05T01:29:46,922 Alternatively, you can also rely on setuptools' discovery methods 2024-01-05T01:29:46,922 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-05T01:29:46,922 instead of `find_packages(...)`/`find:`). 2024-01-05T01:29:46,922 You can read more about "package discovery" on setuptools documentation page: 2024-01-05T01:29:46,922 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-05T01:29:46,923 If you don't want 'trisicell.external.mltd' to be distributed and are 2024-01-05T01:29:46,923 already explicitly excluding 'trisicell.external.mltd' via 2024-01-05T01:29:46,923 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-05T01:29:46,923 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-05T01:29:46,923 combination with a more fine grained `package-data` configuration. 2024-01-05T01:29:46,923 You can read more about "package data files" on setuptools documentation page: 2024-01-05T01:29:46,924 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-05T01:29:46,924 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-05T01:29:46,924 even if it does not contain any `.py` files. 2024-01-05T01:29:46,924 On the other hand, currently there is no concept of package data 2024-01-05T01:29:46,924 directory, all directories are treated like packages. 2024-01-05T01:29:46,925 ******************************************************************************** 2024-01-05T01:29:46,925 !! 2024-01-05T01:29:46,925 check.warn(importable) 2024-01-05T01:29:46,925 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'trisicell.external.scistree' is absent from the `packages` configuration. 2024-01-05T01:29:46,925 !! 2024-01-05T01:29:46,925 ******************************************************************************** 2024-01-05T01:29:46,926 ############################ 2024-01-05T01:29:46,926 # Package would be ignored # 2024-01-05T01:29:46,926 ############################ 2024-01-05T01:29:46,926 Python recognizes 'trisicell.external.scistree' as an importable package[^1], 2024-01-05T01:29:46,926 but it is absent from setuptools' `packages` configuration. 2024-01-05T01:29:46,926 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-05T01:29:46,926 package, please make sure that 'trisicell.external.scistree' is explicitly added 2024-01-05T01:29:46,927 to the `packages` configuration field. 2024-01-05T01:29:46,927 Alternatively, you can also rely on setuptools' discovery methods 2024-01-05T01:29:46,927 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-05T01:29:46,927 instead of `find_packages(...)`/`find:`). 2024-01-05T01:29:46,927 You can read more about "package discovery" on setuptools documentation page: 2024-01-05T01:29:46,928 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-05T01:29:46,928 If you don't want 'trisicell.external.scistree' to be distributed and are 2024-01-05T01:29:46,928 already explicitly excluding 'trisicell.external.scistree' via 2024-01-05T01:29:46,928 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-05T01:29:46,929 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-05T01:29:46,929 combination with a more fine grained `package-data` configuration. 2024-01-05T01:29:46,929 You can read more about "package data files" on setuptools documentation page: 2024-01-05T01:29:46,930 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-05T01:29:46,930 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-05T01:29:46,930 even if it does not contain any `.py` files. 2024-01-05T01:29:46,930 On the other hand, currently there is no concept of package data 2024-01-05T01:29:46,931 directory, all directories are treated like packages. 2024-01-05T01:29:46,931 ******************************************************************************** 2024-01-05T01:29:46,931 !! 2024-01-05T01:29:46,931 check.warn(importable) 2024-01-05T01:29:46,931 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'trisicell.external.scite' is absent from the `packages` configuration. 2024-01-05T01:29:46,931 !! 2024-01-05T01:29:46,932 ******************************************************************************** 2024-01-05T01:29:46,932 ############################ 2024-01-05T01:29:46,932 # Package would be ignored # 2024-01-05T01:29:46,932 ############################ 2024-01-05T01:29:46,932 Python recognizes 'trisicell.external.scite' as an importable package[^1], 2024-01-05T01:29:46,932 but it is absent from setuptools' `packages` configuration. 2024-01-05T01:29:46,933 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-05T01:29:46,933 package, please make sure that 'trisicell.external.scite' is explicitly added 2024-01-05T01:29:46,933 to the `packages` configuration field. 2024-01-05T01:29:46,933 Alternatively, you can also rely on setuptools' discovery methods 2024-01-05T01:29:46,933 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-05T01:29:46,933 instead of `find_packages(...)`/`find:`). 2024-01-05T01:29:46,934 You can read more about "package discovery" on setuptools documentation page: 2024-01-05T01:29:46,934 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-05T01:29:46,934 If you don't want 'trisicell.external.scite' to be distributed and are 2024-01-05T01:29:46,934 already explicitly excluding 'trisicell.external.scite' via 2024-01-05T01:29:46,934 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-05T01:29:46,934 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-05T01:29:46,935 combination with a more fine grained `package-data` configuration. 2024-01-05T01:29:46,936 You can read more about "package data files" on setuptools documentation page: 2024-01-05T01:29:46,936 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-05T01:29:46,937 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-05T01:29:46,937 even if it does not contain any `.py` files. 2024-01-05T01:29:46,937 On the other hand, currently there is no concept of package data 2024-01-05T01:29:46,937 directory, all directories are treated like packages. 2024-01-05T01:29:46,937 ******************************************************************************** 2024-01-05T01:29:46,937 !! 2024-01-05T01:29:46,937 check.warn(importable) 2024-01-05T01:29:46,938 /tmp/pip-build-env-gt9tiiyz/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'trisicell.external.scprob' is absent from the `packages` configuration. 2024-01-05T01:29:46,938 !! 2024-01-05T01:29:46,938 ******************************************************************************** 2024-01-05T01:29:46,938 ############################ 2024-01-05T01:29:46,938 # Package would be ignored # 2024-01-05T01:29:46,938 ############################ 2024-01-05T01:29:46,939 Python recognizes 'trisicell.external.scprob' as an importable package[^1], 2024-01-05T01:29:46,939 but it is absent from setuptools' `packages` configuration. 2024-01-05T01:29:46,939 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-05T01:29:46,939 package, please make sure that 'trisicell.external.scprob' is explicitly added 2024-01-05T01:29:46,939 to the `packages` configuration field. 2024-01-05T01:29:46,939 Alternatively, you can also rely on setuptools' discovery methods 2024-01-05T01:29:46,940 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-05T01:29:46,940 instead of `find_packages(...)`/`find:`). 2024-01-05T01:29:46,940 You can read more about "package discovery" on setuptools documentation page: 2024-01-05T01:29:46,940 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-05T01:29:46,940 If you don't want 'trisicell.external.scprob' to be distributed and are 2024-01-05T01:29:46,941 already explicitly excluding 'trisicell.external.scprob' via 2024-01-05T01:29:46,941 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-05T01:29:46,941 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-05T01:29:46,941 combination with a more fine grained `package-data` configuration. 2024-01-05T01:29:46,941 You can read more about "package data files" on setuptools documentation page: 2024-01-05T01:29:46,942 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-05T01:29:46,942 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-05T01:29:46,942 even if it does not contain any `.py` files. 2024-01-05T01:29:46,942 On the other hand, currently there is no concept of package data 2024-01-05T01:29:46,942 directory, all directories are treated like packages. 2024-01-05T01:29:46,943 ******************************************************************************** 2024-01-05T01:29:46,943 !! 2024-01-05T01:29:46,943 check.warn(importable) 2024-01-05T01:29:46,943 copying trisicell/external/_mltd.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,943 copying trisicell/external/_mltd.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,943 copying trisicell/external/_scistree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,943 copying trisicell/external/_scistree.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,944 copying trisicell/external/_scite.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,944 copying trisicell/external/_scite.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,946 copying trisicell/external/_scprob.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,951 copying trisicell/external/_scprob.pyx -> build/lib.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:46,952 creating build/lib.linux-armv7l-cpython-39/trisicell/external/mltd 2024-01-05T01:29:46,953 copying trisicell/external/mltd/mltd.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/mltd 2024-01-05T01:29:46,955 copying trisicell/external/mltd/mltd.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/mltd 2024-01-05T01:29:46,957 creating build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,958 copying trisicell/external/scistree/BinaryMatrix.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,961 copying trisicell/external/scistree/BinaryMatrix.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,963 copying trisicell/external/scistree/BioSequenceMatrix.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,966 copying trisicell/external/scistree/BioSequenceMatrix.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,968 copying trisicell/external/scistree/GenotypeMatrix.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,971 copying trisicell/external/scistree/GenotypeMatrix.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,972 copying trisicell/external/scistree/MarginalTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,976 copying trisicell/external/scistree/MarginalTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,978 copying trisicell/external/scistree/PhylogenyTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,981 copying trisicell/external/scistree/PhylogenyTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,983 copying trisicell/external/scistree/PhylogenyTreeBasic.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,989 copying trisicell/external/scistree/PhylogenyTreeBasic.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,992 copying trisicell/external/scistree/RBT.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,996 copying trisicell/external/scistree/RBT.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:46,998 copying trisicell/external/scistree/RerootTreeUtils.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,000 copying trisicell/external/scistree/RerootTreeUtils.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,002 copying trisicell/external/scistree/ScistDoublet.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,006 copying trisicell/external/scistree/ScistDoublet.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,008 copying trisicell/external/scistree/ScistErrRateInf.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,010 copying trisicell/external/scistree/ScistErrRateInf.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,012 copying trisicell/external/scistree/ScistGenotype.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,015 copying trisicell/external/scistree/ScistGenotype.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,017 copying trisicell/external/scistree/ScistPerfPhyImp.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,020 copying trisicell/external/scistree/ScistPerfPhyImp.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,022 copying trisicell/external/scistree/ScistPerfPhyUtils.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,025 copying trisicell/external/scistree/ScistPerfPhyUtils.hpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,027 copying trisicell/external/scistree/TreeBuilder.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,030 copying trisicell/external/scistree/TreeBuilder.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,032 copying trisicell/external/scistree/UnWeightedGraph.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,035 copying trisicell/external/scistree/UnWeightedGraph.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,037 copying trisicell/external/scistree/Utils.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,040 copying trisicell/external/scistree/Utils.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,043 copying trisicell/external/scistree/Utils2.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,046 copying trisicell/external/scistree/Utils2.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,048 copying trisicell/external/scistree/Utils3.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,051 copying trisicell/external/scistree/Utils3.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,054 copying trisicell/external/scistree/Utils4.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,057 copying trisicell/external/scistree/Utils4.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,060 copying trisicell/external/scistree/UtilsNumerical.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,062 copying trisicell/external/scistree/UtilsNumerical.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,064 copying trisicell/external/scistree/ctpl_stl.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,067 copying trisicell/external/scistree/main.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,069 copying trisicell/external/scistree/main.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:29:47,071 creating build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,072 copying trisicell/external/scite/findBestTrees.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,075 copying trisicell/external/scite/findBestTrees.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,076 copying trisicell/external/scite/matrices.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,079 copying trisicell/external/scite/matrices.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,080 copying trisicell/external/scite/mcmc.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,083 copying trisicell/external/scite/mcmc.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,085 copying trisicell/external/scite/mcmcBinTreeMove.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,087 copying trisicell/external/scite/mcmcBinTreeMove.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,088 copying trisicell/external/scite/mcmcTreeMove.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,091 copying trisicell/external/scite/mcmcTreeMove.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,093 copying trisicell/external/scite/output.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,095 copying trisicell/external/scite/output.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,097 copying trisicell/external/scite/rand.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,099 copying trisicell/external/scite/rand.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,101 copying trisicell/external/scite/scoreBinTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,104 copying trisicell/external/scite/scoreBinTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,106 copying trisicell/external/scite/scoreTree.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,108 copying trisicell/external/scite/scoreTree.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,110 copying trisicell/external/scite/treelist.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,113 copying trisicell/external/scite/treelist.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,114 copying trisicell/external/scite/trees.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,117 copying trisicell/external/scite/trees.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:29:47,119 creating build/lib.linux-armv7l-cpython-39/trisicell/external/scprob 2024-01-05T01:29:47,119 copying trisicell/external/scprob/main.cpp -> build/lib.linux-armv7l-cpython-39/trisicell/external/scprob 2024-01-05T01:29:47,122 copying trisicell/external/scprob/main.h -> build/lib.linux-armv7l-cpython-39/trisicell/external/scprob 2024-01-05T01:29:47,124 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2024-01-05T01:29:47,125 copying trisicell/datasets/data/expression.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2024-01-05T01:29:47,254 copying trisicell/datasets/data/genotype.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/data 2024-01-05T01:29:47,260 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2024-01-05T01:29:47,261 copying trisicell/datasets/real/colorectal2.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2024-01-05T01:29:47,264 copying trisicell/datasets/real/colorectal2.rc.h5ad -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2024-01-05T01:29:47,269 copying trisicell/datasets/real/ovarian.h5ad.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/real 2024-01-05T01:29:47,539 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2024-01-05T01:29:47,540 copying trisicell/datasets/test/T00.nwk -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2024-01-05T01:29:47,543 copying trisicell/datasets/test/T06.nwk -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2024-01-05T01:29:47,546 copying trisicell/datasets/test/fp_0-fn_0-na_0.ground.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2024-01-05T01:29:47,549 copying trisicell/datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2024-01-05T01:29:47,552 copying trisicell/datasets/test/mcalling_config.yml -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2024-01-05T01:29:47,554 copying trisicell/datasets/test/test.tsv -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test 2024-01-05T01:29:47,556 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2024-01-05T01:29:47,557 copying trisicell/datasets/test/consensus/biorxiv.fig3b.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2024-01-05T01:29:47,566 copying trisicell/datasets/test/consensus/biorxiv.fig3c.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2024-01-05T01:29:47,569 copying trisicell/datasets/test/consensus/biorxiv.fig4b.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2024-01-05T01:29:47,581 copying trisicell/datasets/test/consensus/biorxiv.fig4c.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2024-01-05T01:29:47,584 copying trisicell/datasets/test/consensus/biorxiv.figs18a.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2024-01-05T01:29:47,588 copying trisicell/datasets/test/consensus/recomb.fig1a.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2024-01-05T01:29:47,592 copying trisicell/datasets/test/consensus/recomb.fig1b.CFMatrix -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus 2024-01-05T01:29:47,597 creating build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,597 copying trisicell/datasets/test/mcalling/cell0_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,599 copying trisicell/datasets/test/mcalling/cell0_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,601 copying trisicell/datasets/test/mcalling/cell1_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,603 copying trisicell/datasets/test/mcalling/cell1_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,607 copying trisicell/datasets/test/mcalling/cell2_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,609 copying trisicell/datasets/test/mcalling/cell2_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,611 copying trisicell/datasets/test/mcalling/cell3_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,612 copying trisicell/datasets/test/mcalling/cell3_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,615 copying trisicell/datasets/test/mcalling/cell4_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,616 copying trisicell/datasets/test/mcalling/cell4_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,618 copying trisicell/datasets/test/mcalling/cell5_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,620 copying trisicell/datasets/test/mcalling/cell5_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,622 copying trisicell/datasets/test/mcalling/cell6_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,624 copying trisicell/datasets/test/mcalling/cell6_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,626 copying trisicell/datasets/test/mcalling/cell7_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,628 copying trisicell/datasets/test/mcalling/cell7_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,631 copying trisicell/datasets/test/mcalling/cell8_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,633 copying trisicell/datasets/test/mcalling/cell8_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,635 copying trisicell/datasets/test/mcalling/cell9_1.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,637 copying trisicell/datasets/test/mcalling/cell9_2.fastq.gz -> build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling 2024-01-05T01:29:47,653 running build_ext 2024-01-05T01:29:48,210 building 'trisicell.external._mltd' extension 2024-01-05T01:29:48,211 creating build/temp.linux-armv7l-cpython-39 2024-01-05T01:29:48,211 creating build/temp.linux-armv7l-cpython-39/trisicell 2024-01-05T01:29:48,212 creating build/temp.linux-armv7l-cpython-39/trisicell/external 2024-01-05T01:29:48,213 creating build/temp.linux-armv7l-cpython-39/trisicell/external/mltd 2024-01-05T01:29:48,214 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/mltd -I/usr/include/python3.9 -c trisicell/external/_mltd.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_mltd.o -std=c++11 2024-01-05T01:29:51,128 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/mltd -I/usr/include/python3.9 -c trisicell/external/mltd/mltd.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.o -std=c++11 2024-01-05T01:29:57,408 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/trisicell/external/_mltd.o build/temp.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.cpython-39-arm-linux-gnueabihf.so 2024-01-05T01:29:57,700 building 'trisicell.external._scprob' extension 2024-01-05T01:29:57,701 creating build/temp.linux-armv7l-cpython-39/trisicell/external/scprob 2024-01-05T01:29:57,702 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scprob -I/usr/include/python3.9 -c trisicell/external/_scprob.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_scprob.o -std=c++11 2024-01-05T01:29:59,176 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scprob -I/usr/include/python3.9 -c trisicell/external/scprob/main.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scprob/main.o -std=c++11 2024-01-05T01:30:01,355 trisicell/external/scprob/main.cpp:501:13: warning: ‘void AdjustReadCountForDrop(int, int, const std::map, std::pair >&, std::pair&)’ defined but not used [-Wunused-function] 2024-01-05T01:30:01,355 501 | static void AdjustReadCountForDrop(int cell, int site, const map, pair > &setDropPos, pair &readCount) 2024-01-05T01:30:01,355 | ^~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:01,355 trisicell/external/scprob/main.cpp:487:13: warning: ‘void ConvReadBasedProbToGeno(const std::vector > >&, std::vector >&)’ defined but not used [-Wunused-function] 2024-01-05T01:30:01,356 487 | static void ConvReadBasedProbToGeno( const vector > > &listReadBasedProb, vector > &listGenos) 2024-01-05T01:30:01,356 | ^~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:01,356 trisicell/external/scprob/main.cpp:440:12: warning: ‘int CountTotAlleleForGenos(const std::map >&)’ defined but not used [-Wunused-function] 2024-01-05T01:30:01,356 440 | static int CountTotAlleleForGenos(const map > &mapGenosOfCells) 2024-01-05T01:30:01,356 | ^~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:01,357 trisicell/external/scprob/main.cpp:426:12: warning: ‘int CalcAllele0FreqForGenos(const std::vector&)’ defined but not used [-Wunused-function] 2024-01-05T01:30:01,357 426 | static int CalcAllele0FreqForGenos(const vector &listGenos) 2024-01-05T01:30:01,357 | ^~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:01,357 trisicell/external/scprob/main.cpp:242:13: warning: ‘void CalcGenotypeProbOfReads(const std::pair&, double, std::vector&)’ defined but not used [-Wunused-function] 2024-01-05T01:30:01,357 242 | static void CalcGenotypeProbOfReads(const pair &readsCount01, double allele0Freq, vector &listGenoProbs) 2024-01-05T01:30:01,357 | ^~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:01,357 trisicell/external/scprob/main.cpp:166:15: warning: ‘double CalcProb1()’ defined but not used [-Wunused-function] 2024-01-05T01:30:01,358 166 | static double CalcProb1() 2024-01-05T01:30:01,358 | ^~~~~~~~~ 2024-01-05T01:30:01,358 trisicell/external/scprob/main.cpp:158:15: warning: ‘double CalcProb0(int)’ defined but not used [-Wunused-function] 2024-01-05T01:30:01,358 158 | static double CalcProb0(int cell) 2024-01-05T01:30:01,358 | ^~~~~~~~~ 2024-01-05T01:30:01,358 trisicell/external/scprob/main.cpp:37:15: warning: ‘stdStrandBias’ defined but not used [-Wunused-variable] 2024-01-05T01:30:01,359 37 | static double stdStrandBias = 0.0; 2024-01-05T01:30:01,359 | ^~~~~~~~~~~~~ 2024-01-05T01:30:01,359 trisicell/external/scprob/main.cpp:36:15: warning: ‘aveStrandBias’ defined but not used [-Wunused-variable] 2024-01-05T01:30:01,359 36 | static double aveStrandBias = 0.0; 2024-01-05T01:30:01,359 | ^~~~~~~~~~~~~ 2024-01-05T01:30:01,359 trisicell/external/scprob/main.cpp:35:15: warning: ‘stdReadDepth’ defined but not used [-Wunused-variable] 2024-01-05T01:30:01,359 35 | static double stdReadDepth = 2.0; 2024-01-05T01:30:01,360 | ^~~~~~~~~~~~ 2024-01-05T01:30:01,360 trisicell/external/scprob/main.cpp:34:15: warning: ‘aveReadDepth’ defined but not used [-Wunused-variable] 2024-01-05T01:30:01,360 34 | static double aveReadDepth = 4.0; 2024-01-05T01:30:01,360 | ^~~~~~~~~~~~ 2024-01-05T01:30:01,360 trisicell/external/scprob/main.cpp:28:15: warning: ‘minAlleFreq’ defined but not used [-Wunused-variable] 2024-01-05T01:30:01,360 28 | static double minAlleFreq = 0.0; 2024-01-05T01:30:01,360 | ^~~~~~~~~~~ 2024-01-05T01:30:01,361 trisicell/external/scprob/main.cpp:27:13: warning: ‘seedRndUserDef’ defined but not used [-Wunused-variable] 2024-01-05T01:30:01,361 27 | static bool seedRndUserDef = true; 2024-01-05T01:30:01,361 | ^~~~~~~~~~~~~~ 2024-01-05T01:30:01,361 trisicell/external/scprob/main.cpp:26:15: warning: ‘fracMissing’ defined but not used [-Wunused-variable] 2024-01-05T01:30:01,361 26 | static double fracMissing = 0.0; 2024-01-05T01:30:01,361 | ^~~~~~~~~~~ 2024-01-05T01:30:01,361 trisicell/external/scprob/main.cpp:24:15: warning: ‘rateDropoutstd’ defined but not used [-Wunused-variable] 2024-01-05T01:30:01,362 24 | static double rateDropoutstd = 0.0; 2024-01-05T01:30:01,362 | ^~~~~~~~~~~~~~ 2024-01-05T01:30:02,055 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:02,055 from trisicell/external/scprob/main.cpp:8: 2024-01-05T01:30:02,056 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:30:02,056 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:30:02,056 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:30:02,056 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:02,928 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:30:02,929 from trisicell/external/scprob/main.cpp:8: 2024-01-05T01:30:02,929 /usr/include/c++/10/bits/stl_vector.h: In function ‘int main_in_c(int, char**)’: 2024-01-05T01:30:02,929 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:02,929 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:02,929 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:02,929 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:02,930 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:02,930 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:02,932 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:02,932 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:02,932 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:02,933 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:02,933 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:02,933 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:02,933 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:02,934 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:02,934 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:02,934 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:02,934 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:02,934 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:02,934 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:02,934 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:02,935 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:02,935 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:02,935 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:02,935 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:02,935 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:02,935 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:02,936 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:04,498 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/trisicell/external/_scprob.o build/temp.linux-armv7l-cpython-39/trisicell/external/scprob/main.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.cpython-39-arm-linux-gnueabihf.so 2024-01-05T01:30:04,779 building 'trisicell.external._scistree' extension 2024-01-05T01:30:04,780 creating build/temp.linux-armv7l-cpython-39/trisicell/external/scistree 2024-01-05T01:30:04,782 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/_scistree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_scistree.o -O3 -std=c++11 -c 2024-01-05T01:30:06,310 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/BinaryMatrix.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.o -O3 -std=c++11 -c 2024-01-05T01:30:07,835 trisicell/external/scistree/BinaryMatrix.cpp: In member function ‘void BinaryMatrix::TrimDupSites(std::set*, bool)’: 2024-01-05T01:30:07,835 trisicell/external/scistree/BinaryMatrix.cpp:96:9: warning: variable ‘f’ set but not used [-Wunused-but-set-variable] 2024-01-05T01:30:07,835 96 | bool f = false; 2024-01-05T01:30:07,835 | ^ 2024-01-05T01:30:07,865 trisicell/external/scistree/BinaryMatrix.cpp: In member function ‘bool BinaryMatrix::IsCompatibleRooted(int, int, int, int)’: 2024-01-05T01:30:07,865 trisicell/external/scistree/BinaryMatrix.cpp:870:7: warning: variable ‘f00’ set but not used [-Wunused-but-set-variable] 2024-01-05T01:30:07,866 870 | bool f00 = false; 2024-01-05T01:30:07,866 | ^~~ 2024-01-05T01:30:14,350 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:14,351 from trisicell/external/scistree/BinaryMatrix.h:5, 2024-01-05T01:30:14,351 from trisicell/external/scistree/BinaryMatrix.cpp:1: 2024-01-05T01:30:14,351 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:30:14,351 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:30:14,351 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:30:14,351 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:14,352 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:30:14,455 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:30:14,455 from trisicell/external/scistree/BinaryMatrix.h:5, 2024-01-05T01:30:14,456 from trisicell/external/scistree/BinaryMatrix.cpp:1: 2024-01-05T01:30:14,456 /usr/include/c++/10/bits/stl_vector.h: In function ‘void ReadSitePosFromFirstRowInFile(const char*, int, std::vector&)’: 2024-01-05T01:30:14,456 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:14,456 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:14,456 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:16,308 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:16,309 from trisicell/external/scistree/BinaryMatrix.h:5, 2024-01-05T01:30:16,309 from trisicell/external/scistree/BinaryMatrix.cpp:1: 2024-01-05T01:30:16,309 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:30:16,309 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:30:16,309 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:30:16,309 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:16,348 /usr/include/c++/10/bits/vector.tcc: In member function ‘void BinaryMatrix::CalcSFS(std::vector&) const’: 2024-01-05T01:30:16,348 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:16,348 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:16,348 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:16,384 /usr/include/c++/10/bits/vector.tcc: In member function ‘void BinaryMatrix::CollectAllPairwiseDiffs(const std::set&, const std::set&, std::vector&) const’: 2024-01-05T01:30:16,384 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:16,384 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:16,384 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:17,642 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/BioSequenceMatrix.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.o -O3 -std=c++11 -c 2024-01-05T01:30:18,969 trisicell/external/scistree/BioSequenceMatrix.cpp: In member function ‘void BioSequenceMatrix::TrimDupRows(std::set*, std::vector >*)’: 2024-01-05T01:30:18,969 trisicell/external/scistree/BioSequenceMatrix.cpp:273:7: warning: variable ‘res’ set but not used [-Wunused-but-set-variable] 2024-01-05T01:30:18,970 273 | bool res = false; // we stop unless we find some duplicate rows and/or non-informat site 2024-01-05T01:30:18,970 | ^~~ 2024-01-05T01:30:26,196 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/GenotypeMatrix.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.o -O3 -std=c++11 -c 2024-01-05T01:30:27,498 trisicell/external/scistree/GenotypeMatrix.cpp: In member function ‘bool GenotypeMatrix::AreColumnsComplete(int, int)’: 2024-01-05T01:30:27,498 trisicell/external/scistree/GenotypeMatrix.cpp:140:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:27,498 140 | for (int i = 0; i < completePairs.size(); ++i) 2024-01-05T01:30:27,498 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:29,933 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/MarginalTree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.o -O3 -std=c++11 -c 2024-01-05T01:30:37,904 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:37,904 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:37,905 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:37,905 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:30:37,905 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:30:37,905 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:30:37,905 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:38,169 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:30:38,169 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:38,169 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:38,170 /usr/include/c++/10/bits/stl_vector.h: In function ‘bool ReadinMarginalTrees(std::ifstream&, std::vector&)’: 2024-01-05T01:30:38,170 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:38,170 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:38,170 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:41,556 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:41,557 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:41,557 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:41,557 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:30:41,557 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:30:41,557 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:30:41,557 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:41,558 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:30:41,599 /usr/include/c++/10/bits/vector.tcc: In function ‘void InitMarginalTree(MarginalTree&, int, const std::vector&, const std::vector&)’: 2024-01-05T01:30:41,600 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:41,600 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:41,600 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:41,600 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:41,600 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:41,601 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:41,601 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:41,601 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:41,601 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:41,653 /usr/include/c++/10/bits/vector.tcc: In function ‘void GenRandBinaryTree(int, MarginalTree&)’: 2024-01-05T01:30:41,653 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:41,653 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:41,653 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:41,653 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:41,653 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:41,654 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:41,724 /usr/include/c++/10/bits/vector.tcc: In function ‘bool ReadinMarginalTreesNewickWLenString(const string&, int, MarginalTree&, bool, TaxaMapper*)’: 2024-01-05T01:30:41,724 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:41,724 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:41,724 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,016 /usr/include/c++/10/bits/vector.tcc: In member function ‘void MarginalTree::InitUnitEdgelen()’: 2024-01-05T01:30:42,016 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,016 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:42,016 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,063 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:30:42,064 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:42,064 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,064 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void MarginalTree::InitDefaultEdgeLen()’: 2024-01-05T01:30:42,064 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,064 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:42,064 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:42,065 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:42,065 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:42,065 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,065 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,065 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:42,065 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,208 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:30:42,208 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:42,208 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,208 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void MarginalTree::Binarize()’: 2024-01-05T01:30:42,208 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,208 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:42,209 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:42,209 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,209 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:42,209 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:42,209 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:42,210 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:42,210 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,210 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,210 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:42,210 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,210 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:30:42,211 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:42,211 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,211 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,211 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:42,211 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:42,476 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:42,476 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:42,476 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,476 /usr/include/c++/10/bits/vector.tcc: In member function ‘void MarginalTree::MakeLeafSubtreeOfTwo(int, int, int, double, double)’: 2024-01-05T01:30:42,476 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,477 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:42,477 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,477 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:30:42,477 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:42,477 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,477 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,477 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:42,478 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:42,478 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,478 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:42,478 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:42,478 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:42,478 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:42,478 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,479 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,479 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:42,479 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,479 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,479 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:42,479 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,627 In file included from /usr/include/c++/10/set:60, 2024-01-05T01:30:42,627 from trisicell/external/scistree/Utils.h:6, 2024-01-05T01:30:42,628 from trisicell/external/scistree/MarginalTree.h:8, 2024-01-05T01:30:42,628 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,628 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2024-01-05T01:30:42,628 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:30:42,628 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2024-01-05T01:30:42,628 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,735 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:30:42,735 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:42,735 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,735 /usr/include/c++/10/bits/vector.tcc: In function ‘void GenRandBinaryTreeClock(int, double, MarginalTree&)’: 2024-01-05T01:30:42,735 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,735 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:42,736 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,736 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:42,736 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:30:42,736 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,737 In file included from /usr/include/c++/10/map:61, 2024-01-05T01:30:42,737 from trisicell/external/scistree/Utils.h:7, 2024-01-05T01:30:42,737 from trisicell/external/scistree/MarginalTree.h:8, 2024-01-05T01:30:42,737 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:42,738 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:30:42,738 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:30:42,738 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,738 502 | std::tuple(__k), 2024-01-05T01:30:42,738 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,738 503 | std::tuple<>()); 2024-01-05T01:30:42,738 | ~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,738 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:30:42,739 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:30:42,739 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,739 502 | std::tuple(__k), 2024-01-05T01:30:42,739 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:42,739 503 | std::tuple<>()); 2024-01-05T01:30:42,739 | ~~~~~~~~~~~~~~~ 2024-01-05T01:30:43,164 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:30:43,164 from trisicell/external/scistree/MarginalTree.h:5, 2024-01-05T01:30:43,164 from trisicell/external/scistree/MarginalTree.cpp:1: 2024-01-05T01:30:43,165 /usr/include/c++/10/bits/stl_vector.h: In function ‘void UpdateBranchLenInSubtree(MarginalTree&, std::map&, MarginalTree&)’: 2024-01-05T01:30:43,165 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:43,165 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:43,165 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:44,301 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void MarginalTree::Consolidate()’: 2024-01-05T01:30:44,302 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:30:44,302 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:30:44,302 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:30:49,302 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/PhylogenyTree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.o -O3 -std=c++11 -c 2024-01-05T01:30:50,738 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::SortByOneBit(int, const BinaryMatrix&, const std::vector&, std::vector&)’: 2024-01-05T01:30:50,738 trisicell/external/scistree/PhylogenyTree.cpp:95:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,738 95 | for (int i = 0; i < preList.size(); ++i) 2024-01-05T01:30:50,739 | ~~^~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,739 trisicell/external/scistree/PhylogenyTree.cpp:107:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,739 107 | for (int i = 0; i < preList.size(); ++i) 2024-01-05T01:30:50,739 | ~~^~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,743 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::RemoveDupSites(const BinaryMatrix&, std::vector&, std::vector >&)’: 2024-01-05T01:30:50,743 trisicell/external/scistree/PhylogenyTree.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,743 129 | for (int i = 1; i < sortedPosList.size(); ++i) 2024-01-05T01:30:50,743 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,744 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::ComputeLijLj(const BinaryMatrix&, const std::vector&, const std::vector&, std::vector&, std::vector&)’: 2024-01-05T01:30:50,745 trisicell/external/scistree/PhylogenyTree.cpp:182:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,745 182 | for (int j = 0; j < sortedPosList.size(); ++j) 2024-01-05T01:30:50,745 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,745 trisicell/external/scistree/PhylogenyTree.cpp:199:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,745 199 | for (int j = 0; j < sortedPosList.size(); ++j) 2024-01-05T01:30:50,746 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,747 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘bool PhylogenyTree::ExamineLijLj(const BinaryMatrix&, const std::vector&, const std::vector&, const std::vector&, const std::vector&)’: 2024-01-05T01:30:50,747 trisicell/external/scistree/PhylogenyTree.cpp:221:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,747 221 | for (int j = 0; j < sortedPosList.size(); ++j) 2024-01-05T01:30:50,747 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,752 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::BuildTree(const BinaryMatrix&, const std::vector&, const std::vector&, const std::vector >&, const std::vector&)’: 2024-01-05T01:30:50,752 trisicell/external/scistree/PhylogenyTree.cpp:250:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,753 250 | for (int i = 0; i < sortedPosList.size(); ++i) 2024-01-05T01:30:50,753 | ~~^~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,753 trisicell/external/scistree/PhylogenyTree.cpp:257:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,753 257 | for (int j = 0; j < Lj.size(); ++j) 2024-01-05T01:30:50,753 | ~~^~~~~~~~~~~ 2024-01-05T01:30:50,754 trisicell/external/scistree/PhylogenyTree.cpp:263:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,754 263 | for (int dup = 0; dup < duplicates[j].size(); ++dup) 2024-01-05T01:30:50,754 | ~~~~^~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,758 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::CleanupTree(const BinaryMatrix&)’: 2024-01-05T01:30:50,759 trisicell/external/scistree/PhylogenyTree.cpp:373:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,759 373 | for (int i = 0; i < curTN->nodeValues.size(); ++i) 2024-01-05T01:30:50,759 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,760 trisicell/external/scistree/PhylogenyTree.cpp:399:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,760 399 | for (int i = 0; i < curTN->listChildren.size(); ++i) 2024-01-05T01:30:50,761 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,762 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘void PhylogenyTree::RemoveDegreeTwoNodes()’: 2024-01-05T01:30:50,762 trisicell/external/scistree/PhylogenyTree.cpp:424:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,762 424 | for (int i = 0; i < curTN->listChildren.size(); ++i) 2024-01-05T01:30:50,762 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:50,774 trisicell/external/scistree/PhylogenyTree.cpp: In member function ‘bool PhylogenyTree::ConsOnBinMatrix(const BinaryMatrix&)’: 2024-01-05T01:30:50,774 trisicell/external/scistree/PhylogenyTree.cpp:522:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:50,774 522 | for (int i = 0; i < Lij.size(); ++i) 2024-01-05T01:30:50,774 | ~~^~~~~~~~~~~~ 2024-01-05T01:30:50,865 trisicell/external/scistree/PhylogenyTree.cpp: In function ‘std::string ConsRootedPerfectPhylogenyFromMat(const BinaryMatrix&, bool, bool)’: 2024-01-05T01:30:50,865 trisicell/external/scistree/PhylogenyTree.cpp:564:26: warning: comparison of integer expressions of different signedness: ‘std::set::size_type’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2024-01-05T01:30:50,865 564 | if (split.size() == matInput.GetRowNum()) 2024-01-05T01:30:50,865 | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:57,328 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/PhylogenyTreeBasic.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.o -O3 -std=c++11 -c 2024-01-05T01:30:58,958 trisicell/external/scistree/PhylogenyTreeBasic.cpp: In function ‘bool ReadinPhyloTreesNewick(std::ifstream&, int, std::vector&, TaxaMapper*)’: 2024-01-05T01:30:58,958 trisicell/external/scistree/PhylogenyTreeBasic.cpp:105:9: warning: variable ‘nLvs’ set but not used [-Wunused-but-set-variable] 2024-01-05T01:30:58,958 105 | int nLvs = numLeaves; 2024-01-05T01:30:58,959 | ^~~~ 2024-01-05T01:30:59,499 trisicell/external/scistree/PhylogenyTreeBasic.cpp: In member function ‘void TreeNode::IncEdgeLabelsBy(int, bool)’: 2024-01-05T01:30:59,499 trisicell/external/scistree/PhylogenyTreeBasic.cpp:2346:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:30:59,499 2346 | for (int j = 0; j < listEdgeLabels[i].size(); ++j) 2024-01-05T01:30:59,499 | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:30:59,577 trisicell/external/scistree/PhylogenyTreeBasic.cpp: In member function ‘TreeNode* PhylogenyTreeBasic::ConsOnNewickSubtree(const string&, int&, int&, int, bool, TaxaMapper*)’: 2024-01-05T01:30:59,578 trisicell/external/scistree/PhylogenyTreeBasic.cpp:3543:13: warning: variable ‘rightPos’ set but not used [-Wunused-but-set-variable] 2024-01-05T01:30:59,578 3543 | int rightPos = (int)nwStringPart.size() - 1; 2024-01-05T01:30:59,578 | ^~~~~~~~ 2024-01-05T01:31:18,875 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:31:18,875 from trisicell/external/scistree/PhylogenyTreeBasic.h:7, 2024-01-05T01:31:18,875 from trisicell/external/scistree/PhylogenyTreeBasic.cpp:5: 2024-01-05T01:31:18,875 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:31:18,875 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:31:18,876 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:31:18,876 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:26,126 /usr/include/c++/10/bits/vector.tcc: In function ‘void RandTrimLeavesFromTree(PhylogenyTreeBasic*, int)’: 2024-01-05T01:31:26,126 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:31:26,127 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:31:26,127 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:40,422 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/RBT.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.o -O3 -std=c++11 -c 2024-01-05T01:31:49,196 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:31:49,196 from trisicell/external/scistree/RBT.h:7, 2024-01-05T01:31:49,196 from trisicell/external/scistree/RBT.cpp:1: 2024-01-05T01:31:49,197 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:31:49,197 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:31:49,197 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:31:49,197 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:49,312 /usr/include/c++/10/bits/vector.tcc: In member function ‘void RBT::RetrievePlainDesc(int&, std::vector&, std::vector&, std::vector&)’: 2024-01-05T01:31:49,313 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:31:49,313 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:31:49,313 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:50,571 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/RerootTreeUtils.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.o -O3 -std=c++11 -c 2024-01-05T01:31:51,709 trisicell/external/scistree/RerootTreeUtils.cpp: In function ‘double stringToDouble(std::string&)’: 2024-01-05T01:31:51,709 trisicell/external/scistree/RerootTreeUtils.cpp:62:14: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:31:51,709 62 | for (; i < content.size() && content[i] != '.'; ++i) 2024-01-05T01:31:51,709 | ~~^~~~~~~~~~~~~~~~ 2024-01-05T01:31:51,758 trisicell/external/scistree/RerootTreeUtils.cpp: In function ‘void buildGraph(std::vector >&, std::map >&, std::map, int>&)’: 2024-01-05T01:31:51,758 trisicell/external/scistree/RerootTreeUtils.cpp:95:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:31:51,758 95 | for (int i = 0; i < elements.size(); ++i) 2024-01-05T01:31:51,758 | ~~^~~~~~~~~~~~~~~~~ 2024-01-05T01:31:52,003 trisicell/external/scistree/RerootTreeUtils.cpp: In function ‘void Test_split()’: 2024-01-05T01:31:52,003 trisicell/external/scistree/RerootTreeUtils.cpp:384:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:31:52,003 384 | for (int i = 0; i < elements.size(); ++i) 2024-01-05T01:31:52,003 | ~~^~~~~~~~~~~~~~~~~ 2024-01-05T01:31:52,003 trisicell/external/scistree/RerootTreeUtils.cpp:390:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:31:52,004 390 | for (int i = 0; i < elements.size(); ++i) 2024-01-05T01:31:52,004 | ~~^~~~~~~~~~~~~~~~~ 2024-01-05T01:31:55,146 In file included from /usr/include/c++/10/map:60, 2024-01-05T01:31:55,146 from trisicell/external/scistree/RerootTreeUtils.cpp:8: 2024-01-05T01:31:55,147 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2024-01-05T01:31:55,147 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:55,147 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2024-01-05T01:31:55,147 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,397 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:31:56,397 from trisicell/external/scistree/RerootTreeUtils.cpp:6: 2024-01-05T01:31:56,397 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:31:56,397 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:31:56,398 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:31:56,398 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,895 In file included from /usr/include/c++/10/map:61, 2024-01-05T01:31:56,895 from trisicell/external/scistree/RerootTreeUtils.cpp:8: 2024-01-05T01:31:56,895 /usr/include/c++/10/bits/stl_map.h: In function ‘void buildGraph(std::vector >&, std::map >&, std::map, int>&)’: 2024-01-05T01:31:56,895 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:56,896 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:31:56,896 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,896 502 | std::tuple(__k), 2024-01-05T01:31:56,896 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,896 503 | std::tuple<>()); 2024-01-05T01:31:56,896 | ~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,897 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:56,897 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:31:56,897 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,897 502 | std::tuple(__k), 2024-01-05T01:31:56,897 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,897 503 | std::tuple<>()); 2024-01-05T01:31:56,897 | ~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,898 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:56,898 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:31:56,898 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,898 502 | std::tuple(__k), 2024-01-05T01:31:56,898 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,898 503 | std::tuple<>()); 2024-01-05T01:31:56,898 | ~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,899 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:56,899 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:31:56,899 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,899 502 | std::tuple(__k), 2024-01-05T01:31:56,899 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:56,899 503 | std::tuple<>()); 2024-01-05T01:31:56,899 | ~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,396 /usr/include/c++/10/bits/stl_map.h: In function ‘std::string convert(char*, char*)’: 2024-01-05T01:31:58,397 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:58,397 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:31:58,397 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,397 502 | std::tuple(__k), 2024-01-05T01:31:58,397 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,397 503 | std::tuple<>()); 2024-01-05T01:31:58,397 | ~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,398 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:58,398 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:31:58,398 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,398 502 | std::tuple(__k), 2024-01-05T01:31:58,398 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,398 503 | std::tuple<>()); 2024-01-05T01:31:58,398 | ~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,399 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:58,399 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:31:58,399 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,399 502 | std::tuple(__k), 2024-01-05T01:31:58,399 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,399 503 | std::tuple<>()); 2024-01-05T01:31:58,400 | ~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,400 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:58,400 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:31:58,400 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,400 502 | std::tuple(__k), 2024-01-05T01:31:58,400 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,401 503 | std::tuple<>()); 2024-01-05T01:31:58,401 | ~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,401 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:31:58,401 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:31:58,401 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,401 502 | std::tuple(__k), 2024-01-05T01:31:58,402 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,402 503 | std::tuple<>()); 2024-01-05T01:31:58,402 | ~~~~~~~~~~~~~~~ 2024-01-05T01:31:58,402 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:31:58,402 from trisicell/external/scistree/RerootTreeUtils.cpp:6: 2024-01-05T01:31:58,402 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:31:58,402 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:31:58,403 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:32:01,882 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistDoublet.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.o -O3 -std=c++11 -c 2024-01-05T01:32:06,795 trisicell/external/scistree/ScistDoublet.cpp:744:15: warning: ‘std::string GetNonDoubleName(const string&)’ defined but not used [-Wunused-function] 2024-01-05T01:32:06,795 744 | static string GetNonDoubleName(const string &strTaxon) 2024-01-05T01:32:06,795 | ^~~~~~~~~~~~~~~~ 2024-01-05T01:32:11,397 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:32:11,397 from trisicell/external/scistree/ScistDoublet.hpp:12, 2024-01-05T01:32:11,397 from trisicell/external/scistree/ScistDoublet.cpp:9: 2024-01-05T01:32:11,397 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair&}; _Tp = std::pair; _Alloc = std::allocator >]’: 2024-01-05T01:32:11,398 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2024-01-05T01:32:11,398 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:32:11,398 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:32:11,692 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:32:11,692 from trisicell/external/scistree/ScistDoublet.hpp:12, 2024-01-05T01:32:11,692 from trisicell/external/scistree/ScistDoublet.cpp:9: 2024-01-05T01:32:11,693 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void ScistDoublet::ConsDPTblDoubletNodes(const std::map&, const std::map&, int, ScistPerfPhyClusTreeNode*, std::map > >&) const’: 2024-01-05T01:32:11,693 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2024-01-05T01:32:11,693 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:11,693 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:11,693 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2024-01-05T01:32:11,693 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:11,694 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:11,694 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2024-01-05T01:32:11,695 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:11,695 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:11,697 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2024-01-05T01:32:11,697 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:11,697 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:17,529 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistErrRateInf.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.o -O3 -std=c++11 -c 2024-01-05T01:32:22,221 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistGenotype.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.o -O3 -std=c++11 -c 2024-01-05T01:32:38,575 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistPerfPhyImp.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.o -O3 -std=c++11 -c 2024-01-05T01:32:51,982 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:32:51,982 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2024-01-05T01:32:51,983 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2024-01-05T01:32:51,983 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:32:51,983 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:32:51,983 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:32:51,983 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:32:52,057 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:32:52,058 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2024-01-05T01:32:52,058 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2024-01-05T01:32:52,058 /usr/include/c++/10/bits/stl_vector.h: In member function ‘void ScistPerfPhyMLE::Init()’: 2024-01-05T01:32:52,058 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:32:52,058 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:52,058 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:52,265 /usr/include/c++/10/bits/stl_vector.h: In member function ‘double ScistPerfPhyProbOnTree::CalcProbMaxForSiteGeno(int, ScistPerfPhyCluster&, ScistPerfPhyCluster&) const’: 2024-01-05T01:32:52,265 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:32:52,265 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:52,265 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:52,265 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:32:52,266 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:52,266 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:52,266 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:32:52,266 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:52,266 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:52,266 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:32:52,266 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:52,267 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:52,890 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:32:52,890 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2024-01-05T01:32:52,890 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2024-01-05T01:32:52,890 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:32:52,891 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:32:52,891 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:32:52,891 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:32:52,947 /usr/include/c++/10/bits/vector.tcc: In member function ‘double ScistPerfPhyProbOnTree::CalcProbMaxForSiteHap(int, ScistPerfPhyCluster&) const’: 2024-01-05T01:32:52,947 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:32:52,947 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:32:52,947 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:32:53,065 /usr/include/c++/10/bits/vector.tcc: In member function ‘double ScistPerfPhyProbOnTree::CalcProbForSiteHap(int, double, const std::vector >&) const’: 2024-01-05T01:32:53,065 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:32:53,066 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:32:53,066 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:32:53,555 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:32:53,555 from trisicell/external/scistree/ScistPerfPhyImp.hpp:13, 2024-01-05T01:32:53,555 from trisicell/external/scistree/ScistPerfPhyImp.cpp:9: 2024-01-05T01:32:53,555 /usr/include/c++/10/bits/stl_vector.h: In constructor ‘ScistPerfPhyProbOnTree::ScistPerfPhyProbOnTree(ScistGenGenotypeMat&, MarginalTree&)’: 2024-01-05T01:32:53,555 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:32:53,556 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:32:53,556 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:32:58,803 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/ScistPerfPhyUtils.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.o -O3 -std=c++11 -c 2024-01-05T01:33:07,069 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/TreeBuilder.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.o -O3 -std=c++11 -c 2024-01-05T01:33:14,845 In file included from /usr/include/c++/10/map:60, 2024-01-05T01:33:14,845 from trisicell/external/scistree/TreeBuilder.h:13, 2024-01-05T01:33:14,845 from trisicell/external/scistree/TreeBuilder.cpp:9: 2024-01-05T01:33:14,845 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple&>, std::tuple<>}; _Key = std::pair; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: 2024-01-05T01:33:14,846 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:14,846 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2024-01-05T01:33:14,846 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:14,926 In file included from /usr/include/c++/10/map:61, 2024-01-05T01:33:14,926 from trisicell/external/scistree/TreeBuilder.h:13, 2024-01-05T01:33:14,927 from trisicell/external/scistree/TreeBuilder.cpp:9: 2024-01-05T01:33:14,927 /usr/include/c++/10/bits/stl_map.h: In member function ‘double PhyloDistance::GetDistance(int, int) const’: 2024-01-05T01:33:14,927 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:14,927 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:14,927 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:14,927 502 | std::tuple(__k), 2024-01-05T01:33:14,927 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:14,928 503 | std::tuple<>()); 2024-01-05T01:33:14,928 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:14,928 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:14,928 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:14,928 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:14,928 502 | std::tuple(__k), 2024-01-05T01:33:14,928 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:14,928 503 | std::tuple<>()); 2024-01-05T01:33:14,929 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,173 In file included from /usr/include/c++/10/map:60, 2024-01-05T01:33:15,174 from trisicell/external/scistree/TreeBuilder.h:13, 2024-01-05T01:33:15,174 from trisicell/external/scistree/TreeBuilder.cpp:9: 2024-01-05T01:33:15,174 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::tuple<>}; _Key = int; _Val = std::pair; _KeyOfValue = std::_Select1st >; _Compare = std::less; _Alloc = std::allocator >]’: 2024-01-05T01:33:15,174 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:15,174 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2024-01-05T01:33:15,175 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,302 In file included from /usr/include/c++/10/map:61, 2024-01-05T01:33:15,302 from trisicell/external/scistree/TreeBuilder.h:13, 2024-01-05T01:33:15,302 from trisicell/external/scistree/TreeBuilder.cpp:9: 2024-01-05T01:33:15,302 /usr/include/c++/10/bits/stl_map.h: In member function ‘void DistanceTreeBuilder::NJFindNgbrs(int, std::set&, int&, int&)’: 2024-01-05T01:33:15,302 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:15,303 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:15,303 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,303 502 | std::tuple(__k), 2024-01-05T01:33:15,303 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,303 503 | std::tuple<>()); 2024-01-05T01:33:15,303 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,303 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:15,304 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:15,304 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,304 502 | std::tuple(__k), 2024-01-05T01:33:15,304 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,304 503 | std::tuple<>()); 2024-01-05T01:33:15,304 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,304 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:15,305 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:15,305 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,305 502 | std::tuple(__k), 2024-01-05T01:33:15,305 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,305 503 | std::tuple<>()); 2024-01-05T01:33:15,305 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,305 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:15,306 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:15,306 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,306 502 | std::tuple(__k), 2024-01-05T01:33:15,306 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,306 503 | std::tuple<>()); 2024-01-05T01:33:15,306 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,306 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:15,307 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:15,307 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,307 502 | std::tuple(__k), 2024-01-05T01:33:15,307 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,307 503 | std::tuple<>()); 2024-01-05T01:33:15,307 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,307 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:15,307 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:15,308 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,308 502 | std::tuple(__k), 2024-01-05T01:33:15,308 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:15,308 503 | std::tuple<>()); 2024-01-05T01:33:15,308 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:17,807 In file included from /usr/include/c++/10/map:60, 2024-01-05T01:33:17,807 from trisicell/external/scistree/TreeBuilder.h:13, 2024-01-05T01:33:17,807 from trisicell/external/scistree/TreeBuilder.cpp:9: 2024-01-05T01:33:17,807 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >, std::set, std::allocator > >&>, std::tuple<>}; _Key = std::pair, std::set >; _Val = std::pair, std::set >, double>; _KeyOfValue = std::_Select1st, std::set >, double> >; _Compare = std::less, std::set > >; _Alloc = std::allocator, std::set >, double> >]’: 2024-01-05T01:33:17,808 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:17,808 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2024-01-05T01:33:17,808 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:18,465 In file included from /usr/include/c++/10/map:61, 2024-01-05T01:33:18,465 from trisicell/external/scistree/TreeBuilder.h:13, 2024-01-05T01:33:18,466 from trisicell/external/scistree/TreeBuilder.cpp:9: 2024-01-05T01:33:18,466 /usr/include/c++/10/bits/stl_map.h: In member function ‘void ConstrainedUPGMATreeBuilder::SetDistForTwoClusters(const std::set&, const std::set&, double)’: 2024-01-05T01:33:18,466 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:18,466 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:18,466 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:18,466 502 | std::tuple(__k), 2024-01-05T01:33:18,466 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:18,466 503 | std::tuple<>()); 2024-01-05T01:33:18,467 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:18,656 /usr/include/c++/10/bits/stl_map.h: In member function ‘void ConstrainedUPGMATreeBuilder::UpdateDistUPGMA(const std::set&, const std::set&)’: 2024-01-05T01:33:18,656 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:18,656 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:18,657 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:18,657 502 | std::tuple(__k), 2024-01-05T01:33:18,657 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:18,657 503 | std::tuple<>()); 2024-01-05T01:33:18,657 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:18,657 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:18,657 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:18,658 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:18,658 502 | std::tuple(__k), 2024-01-05T01:33:18,658 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:18,658 503 | std::tuple<>()); 2024-01-05T01:33:18,658 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:19,187 /usr/include/c++/10/bits/stl_map.h: In member function ‘void DistanceTreeBuilder::UpdateDistUPGMA(const std::pair, std::set >&, const std::map, std::pair, double> >&, std::map, std::set >, double>&)’: 2024-01-05T01:33:19,188 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:19,188 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:19,188 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:19,188 502 | std::tuple(__k), 2024-01-05T01:33:19,188 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:19,189 503 | std::tuple<>()); 2024-01-05T01:33:19,189 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:19,189 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::set >, std::pair, std::set >, double>, std::_Select1st, std::set >, double> >, std::less, std::set > >, std::allocator, std::set >, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:33:19,189 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:33:19,189 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:19,189 502 | std::tuple(__k), 2024-01-05T01:33:19,189 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:19,190 503 | std::tuple<>()); 2024-01-05T01:33:19,190 | ~~~~~~~~~~~~~~~ 2024-01-05T01:33:24,422 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/UnWeightedGraph.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.o -O3 -std=c++11 -c 2024-01-05T01:33:34,306 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.o -O3 -std=c++11 -c 2024-01-05T01:33:35,494 trisicell/external/scistree/Utils.cpp: In function ‘void DumpIntVec(const std::vector&)’: 2024-01-05T01:33:35,494 trisicell/external/scistree/Utils.cpp:175:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,495 175 | for(int i=0; i&, const std::vector&)’: 2024-01-05T01:33:35,496 trisicell/external/scistree/Utils.cpp:186:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,496 186 | for(int i=0; i&, const std::vector&)’: 2024-01-05T01:33:35,498 trisicell/external/scistree/Utils.cpp:216:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,498 216 | for(int i=0; i&, const std::vector&)’: 2024-01-05T01:33:35,528 trisicell/external/scistree/Utils.cpp:239:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,528 239 | for(int i=0; i&)’: 2024-01-05T01:33:35,531 trisicell/external/scistree/Utils.cpp:335:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,531 335 | for(int i=0; i&, const std::vector&)’: 2024-01-05T01:33:35,533 trisicell/external/scistree/Utils.cpp:389:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,533 389 | for(int j=i+1; j&, std::vector&)’: 2024-01-05T01:33:35,543 trisicell/external/scistree/Utils.cpp:634:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,543 634 | if(pos >= posvec.size() || i < posvec[pos] ) 2024-01-05T01:33:35,543 | ~~~~^~~~~~~~~~~~~~~~ 2024-01-05T01:33:35,553 trisicell/external/scistree/Utils.cpp: In function ‘void GetIntVec(int, const std::vector&, std::vector&)’: 2024-01-05T01:33:35,553 trisicell/external/scistree/Utils.cpp:657:10: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,553 657 | if(pos >= posvec.size() || i < posvec[pos] ) 2024-01-05T01:33:35,553 | ~~~~^~~~~~~~~~~~~~~~ 2024-01-05T01:33:35,603 trisicell/external/scistree/Utils.cpp: In function ‘bool GetNextPermutation(std::vector&, const std::vector&)’: 2024-01-05T01:33:35,604 trisicell/external/scistree/Utils.cpp:856:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,604 856 | for(int j=i+1; j::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,608 1003 | for(int i=brPt+1; i < s2.size(); ++i) 2024-01-05T01:33:35,608 | ~~^~~~~~~~~~~ 2024-01-05T01:33:35,618 trisicell/external/scistree/Utils.cpp: In function ‘void AddUniqueSeqToVec(const SEQUENCE&, std::vector >&)’: 2024-01-05T01:33:35,618 trisicell/external/scistree/Utils.cpp:1084:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,618 1084 | for(int i=0; i >&)’: 2024-01-05T01:33:35,619 trisicell/external/scistree/Utils.cpp:1096:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,620 1096 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,621 1124 | if(seedPos < 0 || seedPos >= seq1.size() ) 2024-01-05T01:33:35,622 | ~~~~~~~~^~~~~~~~~~~~~~ 2024-01-05T01:33:35,622 trisicell/external/scistree/Utils.cpp:1144:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,622 1144 | for(i=seedPos+1; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,622 1151 | if( i< seq1.size() ) 2024-01-05T01:33:35,622 | ~^~~~~~~~~~~~~ 2024-01-05T01:33:35,623 trisicell/external/scistree/Utils.cpp: In function ‘int IsSeqsMutPair(const SEQUENCE&, const SEQUENCE&)’: 2024-01-05T01:33:35,623 trisicell/external/scistree/Utils.cpp:1183:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,623 1183 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,624 1205 | for(int i=0; i&, const std::vector&, bool&)’: 2024-01-05T01:33:35,626 trisicell/external/scistree/Utils.cpp:1244:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,626 1244 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,627 1258 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,628 1274 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,628 1303 | for(int i=0; i&, std::vector&, std::vector&)’: 2024-01-05T01:33:35,629 trisicell/external/scistree/Utils.cpp:1357:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,629 1357 | for(int i=0; i&, const std::vector&)’: 2024-01-05T01:33:35,631 trisicell/external/scistree/Utils.cpp:1405:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,631 1405 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,631 1409 | for(int i=0; i&, std::vector&)’: 2024-01-05T01:33:35,632 trisicell/external/scistree/Utils.cpp:1440:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:33:35,632 1440 | for(int i=0; i&, std::set&)’ defined but not used [-Wunused-function] 2024-01-05T01:33:36,199 10 | static void MakeComplementSet( int start, int end, 2024-01-05T01:33:36,199 | ^~~~~~~~~~~~~~~~~ 2024-01-05T01:33:41,064 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils2.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.o -O3 -std=c++11 -c 2024-01-05T01:33:45,178 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils3.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.o -O3 -std=c++11 -c 2024-01-05T01:33:54,456 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:33:54,456 from trisicell/external/scistree/Utils3.h:5, 2024-01-05T01:33:54,456 from trisicell/external/scistree/Utils3.cpp:2: 2024-01-05T01:33:54,456 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:33:54,456 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:33:54,457 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:33:54,457 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:33:54,490 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:33:54,490 from trisicell/external/scistree/Utils3.h:5, 2024-01-05T01:33:54,490 from trisicell/external/scistree/Utils3.cpp:2: 2024-01-05T01:33:54,490 /usr/include/c++/10/bits/stl_vector.h: In function ‘double GetLogSumOfTwo(double, double)’: 2024-01-05T01:33:54,490 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:33:54,490 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:33:54,490 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:33:54,491 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:33:54,491 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:33:54,491 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:33:57,544 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/Utils4.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.o -O3 -std=c++11 -c 2024-01-05T01:34:03,637 In file included from /usr/include/c++/10/set:60, 2024-01-05T01:34:03,638 from trisicell/external/scistree/Utils3.h:6, 2024-01-05T01:34:03,638 from trisicell/external/scistree/Utils4.h:12, 2024-01-05T01:34:03,638 from trisicell/external/scistree/Utils4.cpp:9: 2024-01-05T01:34:03,638 /usr/include/c++/10/bits/stl_tree.h: In function ‘std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple&>, std::tuple<>}; _Key = std::pair; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]’: 2024-01-05T01:34:03,638 /usr/include/c++/10/bits/stl_tree.h:2458:7: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:34:03,639 2458 | _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: 2024-01-05T01:34:03,639 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,315 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:34:05,316 from trisicell/external/scistree/Utils3.h:5, 2024-01-05T01:34:05,316 from trisicell/external/scistree/Utils4.h:12, 2024-01-05T01:34:05,316 from trisicell/external/scistree/Utils4.cpp:9: 2024-01-05T01:34:05,316 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:34:05,316 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:34:05,316 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:34:05,316 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,349 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:34:05,349 from trisicell/external/scistree/Utils3.h:5, 2024-01-05T01:34:05,349 from trisicell/external/scistree/Utils4.h:12, 2024-01-05T01:34:05,350 from trisicell/external/scistree/Utils4.cpp:9: 2024-01-05T01:34:05,350 /usr/include/c++/10/bits/stl_vector.h: In function ‘void FindEvenDistriPoints(double, double, double, int, std::vector&)’: 2024-01-05T01:34:05,350 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:05,350 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:05,350 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:05,680 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:34:05,680 from trisicell/external/scistree/Utils3.h:5, 2024-01-05T01:34:05,680 from trisicell/external/scistree/Utils4.h:12, 2024-01-05T01:34:05,680 from trisicell/external/scistree/Utils4.cpp:9: 2024-01-05T01:34:05,681 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair&}; _Tp = std::pair; _Alloc = std::allocator >]’: 2024-01-05T01:34:05,681 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector >::iterator’ changed in GCC 7.1 2024-01-05T01:34:05,681 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:34:05,681 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,919 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:34:05,919 from trisicell/external/scistree/Utils3.h:5, 2024-01-05T01:34:05,919 from trisicell/external/scistree/Utils4.h:12, 2024-01-05T01:34:05,919 from trisicell/external/scistree/Utils4.cpp:9: 2024-01-05T01:34:05,919 /usr/include/c++/10/bits/stl_vector.h: In function ‘void ClusterLinearPoints(const std::vector&, double, std::vector&)’: 2024-01-05T01:34:05,919 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator*, std::vector > >’ changed in GCC 7.1 2024-01-05T01:34:05,920 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:05,920 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:05,921 In file included from /usr/include/c++/10/map:61, 2024-01-05T01:34:05,921 from trisicell/external/scistree/Utils3.h:7, 2024-01-05T01:34:05,922 from trisicell/external/scistree/Utils4.h:12, 2024-01-05T01:34:05,922 from trisicell/external/scistree/Utils4.cpp:9: 2024-01-05T01:34:05,922 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:34:05,922 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:34:05,922 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,922 502 | std::tuple(__k), 2024-01-05T01:34:05,922 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,923 503 | std::tuple<>()); 2024-01-05T01:34:05,923 | ~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,923 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:34:05,923 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:34:05,923 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,923 502 | std::tuple(__k), 2024-01-05T01:34:05,923 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,924 503 | std::tuple<>()); 2024-01-05T01:34:05,924 | ~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,924 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:34:05,924 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:34:05,924 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,924 502 | std::tuple(__k), 2024-01-05T01:34:05,924 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,925 503 | std::tuple<>()); 2024-01-05T01:34:05,925 | ~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,925 /usr/include/c++/10/bits/stl_map.h:501:37: note: parameter passing for argument of type ‘std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator’ changed in GCC 7.1 2024-01-05T01:34:05,925 501 | __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, 2024-01-05T01:34:05,925 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,925 502 | std::tuple(__k), 2024-01-05T01:34:05,926 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:05,926 503 | std::tuple<>()); 2024-01-05T01:34:05,926 | ~~~~~~~~~~~~~~~ 2024-01-05T01:34:09,379 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/UtilsNumerical.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.o -O3 -std=c++11 -c 2024-01-05T01:34:11,009 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scistree -I/usr/include/python3.9 -c trisicell/external/scistree/main.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/main.o -O3 -std=c++11 -c 2024-01-05T01:34:18,296 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/trisicell/external/_scistree.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.o build/temp.linux-armv7l-cpython-39/trisicell/external/scistree/main.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.cpython-39-arm-linux-gnueabihf.so 2024-01-05T01:34:20,165 building 'trisicell.external._scite' extension 2024-01-05T01:34:20,166 creating build/temp.linux-armv7l-cpython-39/trisicell/external/scite 2024-01-05T01:34:20,167 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/_scite.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/_scite.o -O3 -std=c++11 -c 2024-01-05T01:34:21,733 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/findBestTrees.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/findBestTrees.o -O3 -std=c++11 -c 2024-01-05T01:34:22,761 trisicell/external/scite/findBestTrees.cpp: In function ‘int* getParentVectorFromGVfile(std::string, int)’: 2024-01-05T01:34:22,761 trisicell/external/scite/findBestTrees.cpp:206:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:22,761 206 | for(int i=0; i < lines.size(); i++){ 2024-01-05T01:34:22,762 | ~~^~~~~~~~~~~~~~ 2024-01-05T01:34:22,771 trisicell/external/scite/findBestTrees.cpp: In function ‘int getMinDist(int*, std::vector, int)’: 2024-01-05T01:34:22,771 trisicell/external/scite/findBestTrees.cpp:222:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:22,772 222 | for(int i=0; i setMoveProbs()’: 2024-01-05T01:34:22,785 trisicell/external/scite/findBestTrees.cpp:356:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:22,785 356 | for(int i=0; i< treeMoves.size(); i++){ sum += treeMoves[i]; } 2024-01-05T01:34:22,785 | ~^~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:22,786 trisicell/external/scite/findBestTrees.cpp:359:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:22,786 359 | for(int i=0; i< treeMoves.size(); i++){ 2024-01-05T01:34:22,786 | ~^~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:22,787 trisicell/external/scite/findBestTrees.cpp:363:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:22,787 363 | for(int i=0; i< treeMoves.size(); i++){ cout << " " << treeMoves[i];} 2024-01-05T01:34:22,787 | ~^~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:22,788 trisicell/external/scite/findBestTrees.cpp:366:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:22,788 366 | for(int i=0; i< treeMoves.size(); i++){ 2024-01-05T01:34:22,788 | ~^~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:24,418 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:34:24,418 from trisicell/external/scite/findBestTrees.cpp:9: 2024-01-05T01:34:24,418 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:34:24,418 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:34:24,419 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:34:24,419 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:24,480 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:34:24,481 from trisicell/external/scite/findBestTrees.cpp:9: 2024-01-05T01:34:24,481 /usr/include/c++/10/bits/stl_vector.h: In function ‘std::vector setMoveProbs()’: 2024-01-05T01:34:24,481 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:24,481 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:24,481 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:24,481 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:24,482 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:24,482 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:24,482 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:24,482 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:24,482 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:24,482 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:24,482 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:24,483 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:24,483 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:24,483 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:24,483 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:24,483 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:24,483 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:24,483 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:24,483 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:24,484 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:24,484 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:24,560 In file included from /usr/include/c++/10/vector:72, 2024-01-05T01:34:24,561 from trisicell/external/scite/findBestTrees.cpp:9: 2024-01-05T01:34:24,561 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:34:24,561 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:34:24,561 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:34:24,561 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:24,561 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:34:24,590 /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2024-01-05T01:34:24,590 /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:24,590 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-01-05T01:34:24,590 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:27,964 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/matrices.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/matrices.o -O3 -std=c++11 -c 2024-01-05T01:34:29,705 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/mcmc.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/mcmc.o -O3 -std=c++11 -c 2024-01-05T01:34:31,019 trisicell/external/scite/mcmc.cpp: In function ‘std::string runMCMCbeta(std::vector&, double*, int, int, double, std::vector, int, int, int**, char, int*, int, bool, double, double, bool, char)’: 2024-01-05T01:34:31,020 trisicell/external/scite/mcmc.cpp:87:15: warning: variable ‘moveAccepted’ set but not used [-Wunused-but-set-variable] 2024-01-05T01:34:31,020 87 | bool moveAccepted = false; // Is the MCMC move accepted? 2024-01-05T01:34:31,020 | ^~~~~~~~~~~~ 2024-01-05T01:34:32,106 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/mcmcBinTreeMove.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/mcmcBinTreeMove.o -O3 -std=c++11 -c 2024-01-05T01:34:33,170 trisicell/external/scite/mcmcBinTreeMove.cpp: In function ‘int pickNodeToMove(int*, int)’: 2024-01-05T01:34:33,170 trisicell/external/scite/mcmcBinTreeMove.cpp:75:1: warning: control reaches end of non-void function [-Wreturn-type] 2024-01-05T01:34:33,170 75 | } 2024-01-05T01:34:33,170 | ^ 2024-01-05T01:34:33,495 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/mcmcTreeMove.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/mcmcTreeMove.o -O3 -std=c++11 -c 2024-01-05T01:34:34,840 trisicell/external/scite/mcmcTreeMove.cpp: In function ‘bool** getNewAncMatrix(bool**, int, std::vector, std::vector, int, bool**)’: 2024-01-05T01:34:34,840 trisicell/external/scite/mcmcTreeMove.cpp:177:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:34,840 177 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:34,841 178 | for(int j=0; j::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:34,842 185 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:34,843 186 | for(int j=0; j, int, int, double**, int**)’: 2024-01-05T01:34:36,486 trisicell/external/scite/output.cpp:298:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:36,486 298 | for(int i=0; i, int, std::string)’: 2024-01-05T01:34:36,497 trisicell/external/scite/output.cpp:320:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:36,497 320 | for(int i=0; i)’: 2024-01-05T01:34:40,956 trisicell/external/scite/rand.cpp:53:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:40,956 53 | for(int i=1; i)’: 2024-01-05T01:34:40,967 trisicell/external/scite/rand.cpp:96:12: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:40,967 96 | if (index != queue.size() - 1) 2024-01-05T01:34:40,967 | ~~~~~~^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:40,972 trisicell/external/scite/rand.cpp: In function ‘int* getRandomBinaryTree(int)’: 2024-01-05T01:34:40,972 trisicell/external/scite/rand.cpp:119:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:40,972 119 | if (pos != queue.size() - 1){queue[pos] = std::move(queue.back());} 2024-01-05T01:34:40,972 | ~~~~^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:40,973 trisicell/external/scite/rand.cpp:125:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:40,973 125 | if (pos != queue.size() - 1){queue[pos] = std::move(queue.back());} 2024-01-05T01:34:40,973 | ~~~~^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:41,457 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/scoreBinTree.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/scoreBinTree.o -O3 -std=c++11 -c 2024-01-05T01:34:42,405 trisicell/external/scite/scoreBinTree.cpp: In function ‘double getBinTreeScore(int**, int, int, double**, int*)’: 2024-01-05T01:34:42,405 trisicell/external/scite/scoreBinTree.cpp:78:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:42,405 78 | for(int i=0; i&, int)’: 2024-01-05T01:34:45,374 trisicell/external/scite/treelist.cpp:51:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:45,374 51 | for(int i=0; i&, int)’: 2024-01-05T01:34:45,383 trisicell/external/scite/treelist.cpp:59:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:45,383 59 | for(int i=0; i&, int*, int)’: 2024-01-05T01:34:45,383 trisicell/external/scite/treelist.cpp:75:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:45,384 75 | for(int k=0; k::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const treeBeta&}; _Tp = treeBeta; _Alloc = std::allocator]’: 2024-01-05T01:34:45,630 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:34:45,630 426 | vector<_Tp, _Alloc>:: 2024-01-05T01:34:45,630 | ^~~~~~~~~~~~~~~~~~~ 2024-01-05T01:34:45,631 /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-01-05T01:34:45,663 In file included from /usr/include/c++/10/vector:67, 2024-01-05T01:34:45,663 from trisicell/external/scite/treelist.cpp:10: 2024-01-05T01:34:45,663 /usr/include/c++/10/bits/stl_vector.h: In function ‘void resetTreeList(std::vector&, int*, int, double)’: 2024-01-05T01:34:45,663 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:45,663 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:45,663 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:45,678 /usr/include/c++/10/bits/stl_vector.h: In function ‘void updateTreeList(std::vector&, int*, int, double, double, double)’: 2024-01-05T01:34:45,678 /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-01-05T01:34:45,678 1198 | _M_realloc_insert(end(), __x); 2024-01-05T01:34:45,678 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-01-05T01:34:45,777 g++ -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Itrisicell/external/scite -I/usr/include/python3.9 -c trisicell/external/scite/trees.cpp -o build/temp.linux-armv7l-cpython-39/trisicell/external/scite/trees.o -O3 -std=c++11 -c 2024-01-05T01:34:46,798 trisicell/external/scite/trees.cpp: In function ‘int countBranches(int*, int)’: 2024-01-05T01:34:46,799 trisicell/external/scite/trees.cpp:55:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:46,799 55 | for(int i=0; i >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:46,799 58 | for(int i=0; i >&)’: 2024-01-05T01:34:46,801 trisicell/external/scite/trees.cpp:76:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:46,801 76 | for(int i=0; i >, int)’: 2024-01-05T01:34:46,803 trisicell/external/scite/trees.cpp:90:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:46,803 90 | for(int i=0; i::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:46,807 114 | for(int j=0; j >::size_type’ {aka ‘unsigned int’} [-Wsign-compare] 2024-01-05T01:34:46,807 118 | for(int i=0; i build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,631 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_scores.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,633 copying build/lib.linux-armv7l-cpython-39/tests/test_pl.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,634 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_partition_function.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,636 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_solvers.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,638 copying build/lib.linux-armv7l-cpython-39/tests/test_io.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,640 copying build/lib.linux-armv7l-cpython-39/tests/test_pp.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,642 copying build/lib.linux-armv7l-cpython-39/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,643 copying build/lib.linux-armv7l-cpython-39/tests/test_ul.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,645 copying build/lib.linux-armv7l-cpython-39/tests/_helpers.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,646 copying build/lib.linux-armv7l-cpython-39/tests/test_commands.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,648 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_solvers_tmp.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,650 copying build/lib.linux-armv7l-cpython-39/tests/test_logging.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,652 copying build/lib.linux-armv7l-cpython-39/tests/test_tl_consensus.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-05T01:34:48,654 creating build/bdist.linux-armv7l/wheel/trisicell 2024-01-05T01:34:48,655 creating build/bdist.linux-armv7l/wheel/trisicell/settings 2024-01-05T01:34:48,656 copying build/lib.linux-armv7l-cpython-39/trisicell/settings/_settings.py -> build/bdist.linux-armv7l/wheel/trisicell/settings 2024-01-05T01:34:48,658 copying build/lib.linux-armv7l-cpython-39/trisicell/settings/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/settings 2024-01-05T01:34:48,660 creating build/bdist.linux-armv7l/wheel/trisicell/tl 2024-01-05T01:34:48,661 creating build/bdist.linux-armv7l/wheel/trisicell/tl/score 2024-01-05T01:34:48,662 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/score/_others.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/score 2024-01-05T01:34:48,664 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/score/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/score 2024-01-05T01:34:48,666 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/score/_ours.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/score 2024-01-05T01:34:48,669 creating build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2024-01-05T01:34:48,670 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/_partition_function.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2024-01-05T01:34:48,672 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/_pf.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2024-01-05T01:34:48,674 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/_clt_sampler.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2024-01-05T01:34:48,676 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/partition_function/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/partition_function 2024-01-05T01:34:48,678 creating build/bdist.linux-armv7l/wheel/trisicell/tl/cna 2024-01-05T01:34:48,679 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/cna/_cna.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/cna 2024-01-05T01:34:48,681 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/cna/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/cna 2024-01-05T01:34:48,683 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl 2024-01-05T01:34:48,685 creating build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,686 creating build/bdist.linux-armv7l/wheel/trisicell/tl/solver/huntress 2024-01-05T01:34:48,687 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/huntress 2024-01-05T01:34:48,689 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/huntress/_huntress.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/huntress 2024-01-05T01:34:48,692 creating build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2024-01-05T01:34:48,693 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_dependencies.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2024-01-05T01:34:48,695 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_reconstruct_big_tree.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2024-01-05T01:34:48,698 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2024-01-05T01:34:48,700 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_subsamples.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2024-01-05T01:34:48,702 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/booster/_booster.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver/booster 2024-01-05T01:34:48,704 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sciphi.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,706 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_grmt.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,707 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sasc.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,709 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_dendro.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,711 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sphyr.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,713 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_sbm.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,714 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_cellphy.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,716 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_siclonefit.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,718 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,719 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_scelestial.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,721 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_scite.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,723 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_onconem.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,725 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_scistree.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,727 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_bnb.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,730 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_gpps.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,732 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_cardelino.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,734 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/solver/_phiscs.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/solver 2024-01-05T01:34:48,737 creating build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2024-01-05T01:34:48,738 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus/_consensus.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2024-01-05T01:34:48,740 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2024-01-05T01:34:48,741 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/consensus/_consensus_day.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/consensus 2024-01-05T01:34:48,744 creating build/bdist.linux-armv7l/wheel/trisicell/tl/fitch 2024-01-05T01:34:48,745 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch/_fitch.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/fitch 2024-01-05T01:34:48,747 copying build/lib.linux-armv7l-cpython-39/trisicell/tl/fitch/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/tl/fitch 2024-01-05T01:34:48,749 creating build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,750 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_consensus.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,752 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_trees.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,753 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_grmt.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,755 creating build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,756 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s06jointcalling.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,758 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s07merging.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,760 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/z03clean.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,762 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s10velocitying.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,763 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s01indexing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,765 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,766 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s02mapping.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,768 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s09expressing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,770 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s03indexing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,772 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s05calling.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,774 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/z01status.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,776 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s04mapping.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,778 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/s08annotating.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,780 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/mcalling/z02matrixing.py -> build/bdist.linux-armv7l/wheel/trisicell/commands/mcalling 2024-01-05T01:34:48,782 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_sphyr.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,784 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_score.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,785 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/trisicell.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,787 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_siclonefit.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,789 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,790 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_partf.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,792 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_huntress.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,794 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_search.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,795 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_scite.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,797 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_onconem.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,799 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_scistree.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,800 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_bnb.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,802 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_gpps.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,803 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_mcalling.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,805 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_phiscs.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,807 copying build/lib.linux-armv7l-cpython-39/trisicell/commands/_booster.py -> build/bdist.linux-armv7l/wheel/trisicell/commands 2024-01-05T01:34:48,810 creating build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:48,810 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:48,816 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scite.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:48,818 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:48,819 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scite.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:48,869 creating build/bdist.linux-armv7l/wheel/trisicell/external/mltd 2024-01-05T01:34:48,870 copying build/lib.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.h -> build/bdist.linux-armv7l/wheel/trisicell/external/mltd 2024-01-05T01:34:48,872 copying build/lib.linux-armv7l-cpython-39/trisicell/external/mltd/mltd.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/mltd 2024-01-05T01:34:48,875 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:48,881 creating build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,882 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,886 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,888 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,891 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,894 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/main.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,896 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,899 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,902 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistErrRateInf.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,904 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,908 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,911 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,914 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,917 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,920 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RerootTreeUtils.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,922 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,923 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UtilsNumerical.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,925 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,928 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,931 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,932 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils3.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,935 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,938 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/UnWeightedGraph.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,940 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/main.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,942 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,944 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BioSequenceMatrix.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,947 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistGenotype.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,950 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,953 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/RBT.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,955 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/BinaryMatrix.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,958 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ctpl_stl.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,960 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyImp.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,962 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.hpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,965 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,969 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,971 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/MarginalTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,973 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,976 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/GenotypeMatrix.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,978 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/TreeBuilder.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,981 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistPerfPhyUtils.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,984 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils2.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,986 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/ScistDoublet.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,989 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/PhylogenyTreeBasic.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,995 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scistree/Utils4.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scistree 2024-01-05T01:34:48,998 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,014 creating build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2024-01-05T01:34:49,014 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_gpps_hc.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2024-01-05T01:34:49,017 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_utils_hc.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2024-01-05T01:34:49,019 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_nh2lgf.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2024-01-05T01:34:49,020 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2024-01-05T01:34:49,022 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_utils_ilp.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2024-01-05T01:34:49,023 copying build/lib.linux-armv7l-cpython-39/trisicell/external/gpps/_gpps_ilp.py -> build/bdist.linux-armv7l/wheel/trisicell/external/gpps 2024-01-05T01:34:49,025 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mltd.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,027 copying build/lib.linux-armv7l-cpython-39/trisicell/external/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,028 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_mp3.py -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,031 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.pyx -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,032 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,036 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scite.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,041 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scistree.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,657 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_scprob.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,668 creating build/bdist.linux-armv7l/wheel/trisicell/external/scprob 2024-01-05T01:34:49,669 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scprob/main.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scprob 2024-01-05T01:34:49,672 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scprob/main.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scprob 2024-01-05T01:34:49,674 creating build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,675 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/output.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,677 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/matrices.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,678 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/findBestTrees.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,680 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcTreeMove.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,682 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,685 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/output.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,687 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/treelist.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,689 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/rand.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,691 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreBinTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,693 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreTree.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,694 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/rand.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,696 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcBinTreeMove.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,698 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/treelist.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,700 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcTreeMove.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,702 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmc.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,703 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/trees.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,705 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmcBinTreeMove.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,707 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/findBestTrees.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,709 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/trees.h -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,710 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/matrices.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,712 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/mcmc.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,715 copying build/lib.linux-armv7l-cpython-39/trisicell/external/scite/scoreBinTree.cpp -> build/bdist.linux-armv7l/wheel/trisicell/external/scite 2024-01-05T01:34:49,717 copying build/lib.linux-armv7l-cpython-39/trisicell/external/_betabinom.py -> build/bdist.linux-armv7l/wheel/trisicell/external 2024-01-05T01:34:49,720 creating build/bdist.linux-armv7l/wheel/trisicell/logging 2024-01-05T01:34:49,721 copying build/lib.linux-armv7l-cpython-39/trisicell/logging/_logging.py -> build/bdist.linux-armv7l/wheel/trisicell/logging 2024-01-05T01:34:49,723 copying build/lib.linux-armv7l-cpython-39/trisicell/logging/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/logging 2024-01-05T01:34:49,724 copying build/lib.linux-armv7l-cpython-39/trisicell/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell 2024-01-05T01:34:49,726 creating build/bdist.linux-armv7l/wheel/trisicell/pl 2024-01-05T01:34:49,727 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/_data.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2024-01-05T01:34:49,729 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/_trees.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2024-01-05T01:34:49,731 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/_helper.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2024-01-05T01:34:49,733 copying build/lib.linux-armv7l-cpython-39/trisicell/pl/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/pl 2024-01-05T01:34:49,735 creating build/bdist.linux-armv7l/wheel/trisicell/io 2024-01-05T01:34:49,736 copying build/lib.linux-armv7l-cpython-39/trisicell/io/_tree.py -> build/bdist.linux-armv7l/wheel/trisicell/io 2024-01-05T01:34:49,738 copying build/lib.linux-armv7l-cpython-39/trisicell/io/_genotype.py -> build/bdist.linux-armv7l/wheel/trisicell/io 2024-01-05T01:34:49,739 copying build/lib.linux-armv7l-cpython-39/trisicell/io/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/io 2024-01-05T01:34:49,741 creating build/bdist.linux-armv7l/wheel/trisicell/ul 2024-01-05T01:34:49,742 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_hclustering.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2024-01-05T01:34:49,744 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_trees.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2024-01-05T01:34:49,746 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_servers.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2024-01-05T01:34:49,748 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2024-01-05T01:34:49,750 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_utils.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2024-01-05T01:34:49,752 copying build/lib.linux-armv7l-cpython-39/trisicell/ul/_packages.py -> build/bdist.linux-armv7l/wheel/trisicell/ul 2024-01-05T01:34:49,754 creating build/bdist.linux-armv7l/wheel/trisicell/datasets 2024-01-05T01:34:49,755 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/_datasets.py -> build/bdist.linux-armv7l/wheel/trisicell/datasets 2024-01-05T01:34:49,757 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/_simulate.py -> build/bdist.linux-armv7l/wheel/trisicell/datasets 2024-01-05T01:34:49,759 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/datasets 2024-01-05T01:34:49,761 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2024-01-05T01:34:49,762 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/data/expression.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2024-01-05T01:34:49,885 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/data/genotype.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/data 2024-01-05T01:34:49,891 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2024-01-05T01:34:49,892 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling_config.yml -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2024-01-05T01:34:49,894 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/T00.nwk -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2024-01-05T01:34:49,896 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,897 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell2_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,899 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell3_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,900 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell6_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,902 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell7_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,904 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell8_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,905 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell0_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,907 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell3_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,908 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell5_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,910 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell5_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,912 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell9_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,913 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell2_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,916 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell8_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,917 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell1_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,919 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell6_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,921 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell4_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,922 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell7_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,924 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell0_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,925 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell9_1.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,927 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell4_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,929 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/mcalling/cell1_2.fastq.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/mcalling 2024-01-05T01:34:49,930 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/fp_0-fn_0-na_0.ground.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2024-01-05T01:34:49,933 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/test.tsv -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2024-01-05T01:34:49,934 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/T06.nwk -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2024-01-05T01:34:49,937 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2024-01-05T01:34:49,938 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.figs18a.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2024-01-05T01:34:49,941 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig4b.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2024-01-05T01:34:49,957 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/recomb.fig1a.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2024-01-05T01:34:49,962 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig3c.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2024-01-05T01:34:49,964 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig4c.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2024-01-05T01:34:49,967 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/recomb.fig1b.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2024-01-05T01:34:49,972 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/consensus/biorxiv.fig3b.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test/consensus 2024-01-05T01:34:49,980 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix -> build/bdist.linux-armv7l/wheel/trisicell/datasets/test 2024-01-05T01:34:49,982 creating build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2024-01-05T01:34:49,983 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/colorectal2.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2024-01-05T01:34:49,987 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/colorectal2.rc.h5ad -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2024-01-05T01:34:49,991 copying build/lib.linux-armv7l-cpython-39/trisicell/datasets/real/ovarian.h5ad.gz -> build/bdist.linux-armv7l/wheel/trisicell/datasets/real 2024-01-05T01:34:50,261 creating build/bdist.linux-armv7l/wheel/trisicell/pp 2024-01-05T01:34:50,262 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_tree.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2024-01-05T01:34:50,264 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_binary.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2024-01-05T01:34:50,265 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_readcount.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2024-01-05T01:34:50,267 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/__init__.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2024-01-05T01:34:50,269 copying build/lib.linux-armv7l-cpython-39/trisicell/pp/_bifiltering.py -> build/bdist.linux-armv7l/wheel/trisicell/pp 2024-01-05T01:34:50,270 running install_egg_info 2024-01-05T01:34:50,280 Copying trisicell.egg-info to build/bdist.linux-armv7l/wheel/trisicell-0.2.3-py3.9.egg-info 2024-01-05T01:34:50,293 running install_scripts 2024-01-05T01:34:50,363 creating build/bdist.linux-armv7l/wheel/trisicell-0.2.3.dist-info/WHEEL 2024-01-05T01:34:50,366 creating '/tmp/pip-wheel-rfvd8s1w/.tmp-wwrgcipc/trisicell-0.2.3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-05T01:34:50,369 adding 'tests/__init__.py' 2024-01-05T01:34:50,371 adding 'tests/_helpers.py' 2024-01-05T01:34:50,373 adding 'tests/test_commands.py' 2024-01-05T01:34:50,374 adding 'tests/test_datasets.py' 2024-01-05T01:34:50,376 adding 'tests/test_io.py' 2024-01-05T01:34:50,377 adding 'tests/test_logging.py' 2024-01-05T01:34:50,379 adding 'tests/test_pl.py' 2024-01-05T01:34:50,381 adding 'tests/test_pp.py' 2024-01-05T01:34:50,382 adding 'tests/test_tl_consensus.py' 2024-01-05T01:34:50,384 adding 'tests/test_tl_partition_function.py' 2024-01-05T01:34:50,386 adding 'tests/test_tl_scores.py' 2024-01-05T01:34:50,387 adding 'tests/test_tl_solvers.py' 2024-01-05T01:34:50,389 adding 'tests/test_tl_solvers_tmp.py' 2024-01-05T01:34:50,391 adding 'tests/test_ul.py' 2024-01-05T01:34:50,393 adding 'trisicell/__init__.py' 2024-01-05T01:34:50,395 adding 'trisicell/commands/__init__.py' 2024-01-05T01:34:50,397 adding 'trisicell/commands/_bnb.py' 2024-01-05T01:34:50,399 adding 'trisicell/commands/_booster.py' 2024-01-05T01:34:50,401 adding 'trisicell/commands/_consensus.py' 2024-01-05T01:34:50,402 adding 'trisicell/commands/_gpps.py' 2024-01-05T01:34:50,404 adding 'trisicell/commands/_grmt.py' 2024-01-05T01:34:50,406 adding 'trisicell/commands/_huntress.py' 2024-01-05T01:34:50,408 adding 'trisicell/commands/_mcalling.py' 2024-01-05T01:34:50,409 adding 'trisicell/commands/_onconem.py' 2024-01-05T01:34:50,411 adding 'trisicell/commands/_partf.py' 2024-01-05T01:34:50,413 adding 'trisicell/commands/_phiscs.py' 2024-01-05T01:34:50,415 adding 'trisicell/commands/_scistree.py' 2024-01-05T01:34:50,416 adding 'trisicell/commands/_scite.py' 2024-01-05T01:34:50,418 adding 'trisicell/commands/_score.py' 2024-01-05T01:34:50,420 adding 'trisicell/commands/_search.py' 2024-01-05T01:34:50,422 adding 'trisicell/commands/_siclonefit.py' 2024-01-05T01:34:50,423 adding 'trisicell/commands/_sphyr.py' 2024-01-05T01:34:50,425 adding 'trisicell/commands/_trees.py' 2024-01-05T01:34:50,426 adding 'trisicell/commands/trisicell.py' 2024-01-05T01:34:50,429 adding 'trisicell/commands/mcalling/__init__.py' 2024-01-05T01:34:50,430 adding 'trisicell/commands/mcalling/s01indexing.py' 2024-01-05T01:34:50,432 adding 'trisicell/commands/mcalling/s02mapping.py' 2024-01-05T01:34:50,434 adding 'trisicell/commands/mcalling/s03indexing.py' 2024-01-05T01:34:50,436 adding 'trisicell/commands/mcalling/s04mapping.py' 2024-01-05T01:34:50,437 adding 'trisicell/commands/mcalling/s05calling.py' 2024-01-05T01:34:50,438 adding 'trisicell/commands/mcalling/s06jointcalling.py' 2024-01-05T01:34:50,439 adding 'trisicell/commands/mcalling/s07merging.py' 2024-01-05T01:34:50,441 adding 'trisicell/commands/mcalling/s08annotating.py' 2024-01-05T01:34:50,442 adding 'trisicell/commands/mcalling/s09expressing.py' 2024-01-05T01:34:50,443 adding 'trisicell/commands/mcalling/s10velocitying.py' 2024-01-05T01:34:50,444 adding 'trisicell/commands/mcalling/z01status.py' 2024-01-05T01:34:50,446 adding 'trisicell/commands/mcalling/z02matrixing.py' 2024-01-05T01:34:50,447 adding 'trisicell/commands/mcalling/z03clean.py' 2024-01-05T01:34:50,449 adding 'trisicell/datasets/__init__.py' 2024-01-05T01:34:50,451 adding 'trisicell/datasets/_datasets.py' 2024-01-05T01:34:50,452 adding 'trisicell/datasets/_simulate.py' 2024-01-05T01:34:51,473 adding 'trisicell/datasets/data/expression.h5ad.gz' 2024-01-05T01:34:51,546 adding 'trisicell/datasets/data/genotype.h5ad.gz' 2024-01-05T01:34:51,554 adding 'trisicell/datasets/real/colorectal2.h5ad' 2024-01-05T01:34:51,564 adding 'trisicell/datasets/real/colorectal2.rc.h5ad' 2024-01-05T01:34:53,962 adding 'trisicell/datasets/real/ovarian.h5ad.gz' 2024-01-05T01:34:54,079 adding 'trisicell/datasets/test/T00.nwk' 2024-01-05T01:34:54,080 adding 'trisicell/datasets/test/T06.nwk' 2024-01-05T01:34:54,082 adding 'trisicell/datasets/test/fp_0-fn_0-na_0.ground.CFMatrix' 2024-01-05T01:34:54,084 adding 'trisicell/datasets/test/fp_1-fn_0.1-na_0.bnb.CFMatrix' 2024-01-05T01:34:54,086 adding 'trisicell/datasets/test/mcalling_config.yml' 2024-01-05T01:34:54,087 adding 'trisicell/datasets/test/test.tsv' 2024-01-05T01:34:54,123 adding 'trisicell/datasets/test/consensus/biorxiv.fig3b.CFMatrix' 2024-01-05T01:34:54,131 adding 'trisicell/datasets/test/consensus/biorxiv.fig3c.CFMatrix' 2024-01-05T01:34:54,205 adding 'trisicell/datasets/test/consensus/biorxiv.fig4b.CFMatrix' 2024-01-05T01:34:54,215 adding 'trisicell/datasets/test/consensus/biorxiv.fig4c.CFMatrix' 2024-01-05T01:34:54,221 adding 'trisicell/datasets/test/consensus/biorxiv.figs18a.CFMatrix' 2024-01-05T01:34:54,241 adding 'trisicell/datasets/test/consensus/recomb.fig1a.CFMatrix' 2024-01-05T01:34:54,261 adding 'trisicell/datasets/test/consensus/recomb.fig1b.CFMatrix' 2024-01-05T01:34:54,264 adding 'trisicell/datasets/test/mcalling/cell0_1.fastq.gz' 2024-01-05T01:34:54,265 adding 'trisicell/datasets/test/mcalling/cell0_2.fastq.gz' 2024-01-05T01:34:54,267 adding 'trisicell/datasets/test/mcalling/cell1_1.fastq.gz' 2024-01-05T01:34:54,268 adding 'trisicell/datasets/test/mcalling/cell1_2.fastq.gz' 2024-01-05T01:34:54,269 adding 'trisicell/datasets/test/mcalling/cell2_1.fastq.gz' 2024-01-05T01:34:54,270 adding 'trisicell/datasets/test/mcalling/cell2_2.fastq.gz' 2024-01-05T01:34:54,271 adding 'trisicell/datasets/test/mcalling/cell3_1.fastq.gz' 2024-01-05T01:34:54,273 adding 'trisicell/datasets/test/mcalling/cell3_2.fastq.gz' 2024-01-05T01:34:54,274 adding 'trisicell/datasets/test/mcalling/cell4_1.fastq.gz' 2024-01-05T01:34:54,276 adding 'trisicell/datasets/test/mcalling/cell4_2.fastq.gz' 2024-01-05T01:34:54,277 adding 'trisicell/datasets/test/mcalling/cell5_1.fastq.gz' 2024-01-05T01:34:54,278 adding 'trisicell/datasets/test/mcalling/cell5_2.fastq.gz' 2024-01-05T01:34:54,279 adding 'trisicell/datasets/test/mcalling/cell6_1.fastq.gz' 2024-01-05T01:34:54,281 adding 'trisicell/datasets/test/mcalling/cell6_2.fastq.gz' 2024-01-05T01:34:54,282 adding 'trisicell/datasets/test/mcalling/cell7_1.fastq.gz' 2024-01-05T01:34:54,283 adding 'trisicell/datasets/test/mcalling/cell7_2.fastq.gz' 2024-01-05T01:34:54,285 adding 'trisicell/datasets/test/mcalling/cell8_1.fastq.gz' 2024-01-05T01:34:54,286 adding 'trisicell/datasets/test/mcalling/cell8_2.fastq.gz' 2024-01-05T01:34:54,287 adding 'trisicell/datasets/test/mcalling/cell9_1.fastq.gz' 2024-01-05T01:34:54,288 adding 'trisicell/datasets/test/mcalling/cell9_2.fastq.gz' 2024-01-05T01:34:54,290 adding 'trisicell/external/__init__.py' 2024-01-05T01:34:54,296 adding 'trisicell/external/_betabinom.py' 2024-01-05T01:34:54,309 adding 'trisicell/external/_mltd.cpp' 2024-01-05T01:34:54,449 adding 'trisicell/external/_mltd.cpython-39-arm-linux-gnueabihf.so' 2024-01-05T01:34:54,455 adding 'trisicell/external/_mltd.pyx' 2024-01-05T01:34:54,457 adding 'trisicell/external/_mp3.py' 2024-01-05T01:34:54,469 adding 'trisicell/external/_scistree.cpp' 2024-01-05T01:34:58,528 adding 'trisicell/external/_scistree.cpython-39-arm-linux-gnueabihf.so' 2024-01-05T01:34:58,683 adding 'trisicell/external/_scistree.pyx' 2024-01-05T01:34:58,695 adding 'trisicell/external/_scite.cpp' 2024-01-05T01:34:59,040 adding 'trisicell/external/_scite.cpython-39-arm-linux-gnueabihf.so' 2024-01-05T01:34:59,052 adding 'trisicell/external/_scite.pyx' 2024-01-05T01:34:59,064 adding 'trisicell/external/_scprob.cpp' 2024-01-05T01:34:59,167 adding 'trisicell/external/_scprob.cpython-39-arm-linux-gnueabihf.so' 2024-01-05T01:34:59,172 adding 'trisicell/external/_scprob.pyx' 2024-01-05T01:34:59,174 adding 'trisicell/external/gpps/__init__.py' 2024-01-05T01:34:59,175 adding 'trisicell/external/gpps/_gpps_hc.py' 2024-01-05T01:34:59,177 adding 'trisicell/external/gpps/_gpps_ilp.py' 2024-01-05T01:34:59,178 adding 'trisicell/external/gpps/_nh2lgf.py' 2024-01-05T01:34:59,180 adding 'trisicell/external/gpps/_utils_hc.py' 2024-01-05T01:34:59,181 adding 'trisicell/external/gpps/_utils_ilp.py' 2024-01-05T01:34:59,183 adding 'trisicell/external/mltd/mltd.cpp' 2024-01-05T01:34:59,184 adding 'trisicell/external/mltd/mltd.h' 2024-01-05T01:34:59,191 adding 'trisicell/external/scistree/BinaryMatrix.cpp' 2024-01-05T01:34:59,192 adding 'trisicell/external/scistree/BinaryMatrix.h' 2024-01-05T01:34:59,196 adding 'trisicell/external/scistree/BioSequenceMatrix.cpp' 2024-01-05T01:34:59,197 adding 'trisicell/external/scistree/BioSequenceMatrix.h' 2024-01-05T01:34:59,199 adding 'trisicell/external/scistree/GenotypeMatrix.cpp' 2024-01-05T01:34:59,200 adding 'trisicell/external/scistree/GenotypeMatrix.h' 2024-01-05T01:34:59,212 adding 'trisicell/external/scistree/MarginalTree.cpp' 2024-01-05T01:34:59,214 adding 'trisicell/external/scistree/MarginalTree.h' 2024-01-05T01:34:59,217 adding 'trisicell/external/scistree/PhylogenyTree.cpp' 2024-01-05T01:34:59,219 adding 'trisicell/external/scistree/PhylogenyTree.h' 2024-01-05T01:34:59,239 adding 'trisicell/external/scistree/PhylogenyTreeBasic.cpp' 2024-01-05T01:34:59,242 adding 'trisicell/external/scistree/PhylogenyTreeBasic.h' 2024-01-05T01:34:59,252 adding 'trisicell/external/scistree/RBT.cpp' 2024-01-05T01:34:59,254 adding 'trisicell/external/scistree/RBT.h' 2024-01-05T01:34:59,256 adding 'trisicell/external/scistree/RerootTreeUtils.cpp' 2024-01-05T01:34:59,257 adding 'trisicell/external/scistree/RerootTreeUtils.h' 2024-01-05T01:34:59,262 adding 'trisicell/external/scistree/ScistDoublet.cpp' 2024-01-05T01:34:59,264 adding 'trisicell/external/scistree/ScistDoublet.hpp' 2024-01-05T01:34:59,266 adding 'trisicell/external/scistree/ScistErrRateInf.cpp' 2024-01-05T01:34:59,267 adding 'trisicell/external/scistree/ScistErrRateInf.hpp' 2024-01-05T01:34:59,271 adding 'trisicell/external/scistree/ScistGenotype.cpp' 2024-01-05T01:34:59,272 adding 'trisicell/external/scistree/ScistGenotype.hpp' 2024-01-05T01:34:59,277 adding 'trisicell/external/scistree/ScistPerfPhyImp.cpp' 2024-01-05T01:34:59,279 adding 'trisicell/external/scistree/ScistPerfPhyImp.hpp' 2024-01-05T01:34:59,281 adding 'trisicell/external/scistree/ScistPerfPhyUtils.cpp' 2024-01-05T01:34:59,283 adding 'trisicell/external/scistree/ScistPerfPhyUtils.hpp' 2024-01-05T01:34:59,287 adding 'trisicell/external/scistree/TreeBuilder.cpp' 2024-01-05T01:34:59,289 adding 'trisicell/external/scistree/TreeBuilder.h' 2024-01-05T01:34:59,293 adding 'trisicell/external/scistree/UnWeightedGraph.cpp' 2024-01-05T01:34:59,295 adding 'trisicell/external/scistree/UnWeightedGraph.h' 2024-01-05T01:34:59,299 adding 'trisicell/external/scistree/Utils.cpp' 2024-01-05T01:34:59,301 adding 'trisicell/external/scistree/Utils.h' 2024-01-05T01:34:59,303 adding 'trisicell/external/scistree/Utils2.cpp' 2024-01-05T01:34:59,305 adding 'trisicell/external/scistree/Utils2.h' 2024-01-05T01:34:59,313 adding 'trisicell/external/scistree/Utils3.cpp' 2024-01-05T01:34:59,316 adding 'trisicell/external/scistree/Utils3.h' 2024-01-05T01:34:59,319 adding 'trisicell/external/scistree/Utils4.cpp' 2024-01-05T01:34:59,325 adding 'trisicell/external/scistree/Utils4.h' 2024-01-05T01:34:59,327 adding 'trisicell/external/scistree/UtilsNumerical.cpp' 2024-01-05T01:34:59,329 adding 'trisicell/external/scistree/UtilsNumerical.h' 2024-01-05T01:34:59,331 adding 'trisicell/external/scistree/ctpl_stl.h' 2024-01-05T01:34:59,333 adding 'trisicell/external/scistree/main.cpp' 2024-01-05T01:34:59,334 adding 'trisicell/external/scistree/main.h' 2024-01-05T01:34:59,337 adding 'trisicell/external/scite/findBestTrees.cpp' 2024-01-05T01:34:59,338 adding 'trisicell/external/scite/findBestTrees.h' 2024-01-05T01:34:59,340 adding 'trisicell/external/scite/matrices.cpp' 2024-01-05T01:34:59,341 adding 'trisicell/external/scite/matrices.h' 2024-01-05T01:34:59,343 adding 'trisicell/external/scite/mcmc.cpp' 2024-01-05T01:34:59,345 adding 'trisicell/external/scite/mcmc.h' 2024-01-05T01:34:59,346 adding 'trisicell/external/scite/mcmcBinTreeMove.cpp' 2024-01-05T01:34:59,347 adding 'trisicell/external/scite/mcmcBinTreeMove.h' 2024-01-05T01:34:59,349 adding 'trisicell/external/scite/mcmcTreeMove.cpp' 2024-01-05T01:34:59,350 adding 'trisicell/external/scite/mcmcTreeMove.h' 2024-01-05T01:34:59,352 adding 'trisicell/external/scite/output.cpp' 2024-01-05T01:34:59,354 adding 'trisicell/external/scite/output.h' 2024-01-05T01:34:59,355 adding 'trisicell/external/scite/rand.cpp' 2024-01-05T01:34:59,356 adding 'trisicell/external/scite/rand.h' 2024-01-05T01:34:59,358 adding 'trisicell/external/scite/scoreBinTree.cpp' 2024-01-05T01:34:59,359 adding 'trisicell/external/scite/scoreBinTree.h' 2024-01-05T01:34:59,361 adding 'trisicell/external/scite/scoreTree.cpp' 2024-01-05T01:34:59,362 adding 'trisicell/external/scite/scoreTree.h' 2024-01-05T01:34:59,364 adding 'trisicell/external/scite/treelist.cpp' 2024-01-05T01:34:59,365 adding 'trisicell/external/scite/treelist.h' 2024-01-05T01:34:59,367 adding 'trisicell/external/scite/trees.cpp' 2024-01-05T01:34:59,368 adding 'trisicell/external/scite/trees.h' 2024-01-05T01:34:59,372 adding 'trisicell/external/scprob/main.cpp' 2024-01-05T01:34:59,374 adding 'trisicell/external/scprob/main.h' 2024-01-05T01:34:59,375 adding 'trisicell/io/__init__.py' 2024-01-05T01:34:59,377 adding 'trisicell/io/_genotype.py' 2024-01-05T01:34:59,378 adding 'trisicell/io/_tree.py' 2024-01-05T01:34:59,379 adding 'trisicell/logging/__init__.py' 2024-01-05T01:34:59,381 adding 'trisicell/logging/_logging.py' 2024-01-05T01:34:59,382 adding 'trisicell/pl/__init__.py' 2024-01-05T01:34:59,384 adding 'trisicell/pl/_data.py' 2024-01-05T01:34:59,385 adding 'trisicell/pl/_helper.py' 2024-01-05T01:34:59,387 adding 'trisicell/pl/_trees.py' 2024-01-05T01:34:59,389 adding 'trisicell/pp/__init__.py' 2024-01-05T01:34:59,390 adding 'trisicell/pp/_bifiltering.py' 2024-01-05T01:34:59,391 adding 'trisicell/pp/_binary.py' 2024-01-05T01:34:59,393 adding 'trisicell/pp/_readcount.py' 2024-01-05T01:34:59,394 adding 'trisicell/pp/_tree.py' 2024-01-05T01:34:59,396 adding 'trisicell/settings/__init__.py' 2024-01-05T01:34:59,397 adding 'trisicell/settings/_settings.py' 2024-01-05T01:34:59,399 adding 'trisicell/tl/__init__.py' 2024-01-05T01:34:59,401 adding 'trisicell/tl/cna/__init__.py' 2024-01-05T01:34:59,402 adding 'trisicell/tl/cna/_cna.py' 2024-01-05T01:34:59,404 adding 'trisicell/tl/consensus/__init__.py' 2024-01-05T01:34:59,405 adding 'trisicell/tl/consensus/_consensus.py' 2024-01-05T01:34:59,407 adding 'trisicell/tl/consensus/_consensus_day.py' 2024-01-05T01:34:59,408 adding 'trisicell/tl/fitch/__init__.py' 2024-01-05T01:34:59,410 adding 'trisicell/tl/fitch/_fitch.py' 2024-01-05T01:34:59,411 adding 'trisicell/tl/partition_function/__init__.py' 2024-01-05T01:34:59,412 adding 'trisicell/tl/partition_function/_clt_sampler.py' 2024-01-05T01:34:59,414 adding 'trisicell/tl/partition_function/_partition_function.py' 2024-01-05T01:34:59,415 adding 'trisicell/tl/partition_function/_pf.py' 2024-01-05T01:34:59,417 adding 'trisicell/tl/score/__init__.py' 2024-01-05T01:34:59,419 adding 'trisicell/tl/score/_others.py' 2024-01-05T01:34:59,420 adding 'trisicell/tl/score/_ours.py' 2024-01-05T01:34:59,422 adding 'trisicell/tl/solver/__init__.py' 2024-01-05T01:34:59,426 adding 'trisicell/tl/solver/_bnb.py' 2024-01-05T01:34:59,428 adding 'trisicell/tl/solver/_cardelino.py' 2024-01-05T01:34:59,429 adding 'trisicell/tl/solver/_cellphy.py' 2024-01-05T01:34:59,430 adding 'trisicell/tl/solver/_dendro.py' 2024-01-05T01:34:59,432 adding 'trisicell/tl/solver/_gpps.py' 2024-01-05T01:34:59,433 adding 'trisicell/tl/solver/_grmt.py' 2024-01-05T01:34:59,434 adding 'trisicell/tl/solver/_onconem.py' 2024-01-05T01:34:59,437 adding 'trisicell/tl/solver/_phiscs.py' 2024-01-05T01:34:59,438 adding 'trisicell/tl/solver/_sasc.py' 2024-01-05T01:34:59,440 adding 'trisicell/tl/solver/_sbm.py' 2024-01-05T01:34:59,441 adding 'trisicell/tl/solver/_scelestial.py' 2024-01-05T01:34:59,442 adding 'trisicell/tl/solver/_sciphi.py' 2024-01-05T01:34:59,444 adding 'trisicell/tl/solver/_scistree.py' 2024-01-05T01:34:59,446 adding 'trisicell/tl/solver/_scite.py' 2024-01-05T01:34:59,448 adding 'trisicell/tl/solver/_siclonefit.py' 2024-01-05T01:34:59,449 adding 'trisicell/tl/solver/_sphyr.py' 2024-01-05T01:34:59,451 adding 'trisicell/tl/solver/booster/__init__.py' 2024-01-05T01:34:59,452 adding 'trisicell/tl/solver/booster/_booster.py' 2024-01-05T01:34:59,454 adding 'trisicell/tl/solver/booster/_dependencies.py' 2024-01-05T01:34:59,456 adding 'trisicell/tl/solver/booster/_reconstruct_big_tree.py' 2024-01-05T01:34:59,458 adding 'trisicell/tl/solver/booster/_subsamples.py' 2024-01-05T01:34:59,459 adding 'trisicell/tl/solver/huntress/__init__.py' 2024-01-05T01:34:59,462 adding 'trisicell/tl/solver/huntress/_huntress.py' 2024-01-05T01:34:59,464 adding 'trisicell/ul/__init__.py' 2024-01-05T01:34:59,466 adding 'trisicell/ul/_hclustering.py' 2024-01-05T01:34:59,467 adding 'trisicell/ul/_packages.py' 2024-01-05T01:34:59,468 adding 'trisicell/ul/_servers.py' 2024-01-05T01:34:59,470 adding 'trisicell/ul/_trees.py' 2024-01-05T01:34:59,472 adding 'trisicell/ul/_utils.py' 2024-01-05T01:34:59,475 adding 'trisicell-0.2.3.dist-info/LICENSE' 2024-01-05T01:34:59,476 adding 'trisicell-0.2.3.dist-info/METADATA' 2024-01-05T01:34:59,477 adding 'trisicell-0.2.3.dist-info/WHEEL' 2024-01-05T01:34:59,478 adding 'trisicell-0.2.3.dist-info/dependency_links.txt' 2024-01-05T01:34:59,479 adding 'trisicell-0.2.3.dist-info/entry_points.txt' 2024-01-05T01:34:59,480 adding 'trisicell-0.2.3.dist-info/top_level.txt' 2024-01-05T01:34:59,483 adding 'trisicell-0.2.3.dist-info/RECORD' 2024-01-05T01:34:59,812 removing build/bdist.linux-armv7l/wheel 2024-01-05T01:35:00,042 Building wheel for trisicell (pyproject.toml): finished with status 'done' 2024-01-05T01:35:00,706 Created wheel for trisicell: filename=trisicell-0.2.3-cp39-cp39-linux_armv7l.whl size=31011179 sha256=71314bdb63e00b522d4d7e86927cf3ea3c449d1e2af6f3380fc61edbf796c198 2024-01-05T01:35:00,707 Stored in directory: /tmp/pip-ephem-wheel-cache-wgnrq5uz/wheels/f7/30/bf/34f94d4bf239d7fd9aceda44899593bf7f36cba054ad39e96e 2024-01-05T01:35:00,739 Successfully built trisicell 2024-01-05T01:35:01,478 Removed build tracker: '/tmp/pip-build-tracker-4qc96r2f'