2024-01-06T02:26:25,638 Created temporary directory: /tmp/pip-build-tracker-l920aj7h 2024-01-06T02:26:25,640 Initialized build tracking at /tmp/pip-build-tracker-l920aj7h 2024-01-06T02:26:25,640 Created build tracker: /tmp/pip-build-tracker-l920aj7h 2024-01-06T02:26:25,641 Entered build tracker: /tmp/pip-build-tracker-l920aj7h 2024-01-06T02:26:25,641 Created temporary directory: /tmp/pip-wheel-c17gxy8x 2024-01-06T02:26:25,645 Created temporary directory: /tmp/pip-ephem-wheel-cache-279dbsfq 2024-01-06T02:26:25,667 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-06T02:26:25,670 2 location(s) to search for versions of pdb2pqr: 2024-01-06T02:26:25,670 * https://pypi.org/simple/pdb2pqr/ 2024-01-06T02:26:25,670 * https://www.piwheels.org/simple/pdb2pqr/ 2024-01-06T02:26:25,671 Fetching project page and analyzing links: https://pypi.org/simple/pdb2pqr/ 2024-01-06T02:26:25,672 Getting page https://pypi.org/simple/pdb2pqr/ 2024-01-06T02:26:25,673 Found index url https://pypi.org/simple/ 2024-01-06T02:26:25,923 Fetched page https://pypi.org/simple/pdb2pqr/ as application/vnd.pypi.simple.v1+json 2024-01-06T02:26:25,930 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/57/04/bb33da3ec20e6dcd370269adf26227bb89f603fc7049c90e817e6483d5d6/pdb2pqr-3.0.0-py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,931 Found link https://files.pythonhosted.org/packages/31/a3/fadf0c0afc577bbdcfdf145b47d2954e7594c83e1c3e150f510bf4757166/pdb2pqr-3.0.0.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.0.0 2024-01-06T02:26:25,931 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/28/f5/b122ef1691714e4c625862ed3c85aa859c4c242c3611aa99c0a271f403cb/pdb2pqr-3.0.1-py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,932 Found link https://files.pythonhosted.org/packages/03/1b/601c04590dcc7b466b8f7f49241b26907c82c3864184ce805b4e2736f814/pdb2pqr-3.0.1.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.0.1 2024-01-06T02:26:25,933 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/f0/49/fa1e47786b520ca3f1f948ea516283d86ecd0c2d3ba46dd736cc196d77c6/pdb2pqr-3.1.0-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,934 Found link https://files.pythonhosted.org/packages/6c/c1/febb6b4e8de3287e2176712a99c4095f0fdd1f9e73e21bfb0824c7ac9368/pdb2pqr-3.1.0.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.1.0 2024-01-06T02:26:25,934 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/f5/37/ffde1f53a2f3ac6907aeddbba94b04d542d6e5e70ba0692d6b424578f4bf/pdb2pqr-3.2.0-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,935 Found link https://files.pythonhosted.org/packages/09/b3/69d494c4ed5340461401abee7f61958d076084c00d2e3139c82f5048c43b/pdb2pqr-3.2.0.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.2.0 2024-01-06T02:26:25,936 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/11/44/334834c4d5919ce959a6c2f5549cb7517206dde16ae4c18f1efd7ad2e39d/pdb2pqr-3.2.3-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,937 Found link https://files.pythonhosted.org/packages/22/47/f9064d5b3c2ff71028e34a4acc3426e9b74ad9abdbfddea7f482f8c70c5d/pdb2pqr-3.2.3.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.2.3 2024-01-06T02:26:25,938 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/e0/27/2d5241c1187469486f9ee4ee7ec697a29d0c891b9547fe9cfb72abeb467a/pdb2pqr-3.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,938 Found link https://files.pythonhosted.org/packages/f6/d4/fd62fcddf45ff39e0489315104088a429a58a25381a283a1350fbb3b0b40/pdb2pqr-3.3.1.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.3.1 2024-01-06T02:26:25,939 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/1c/16/395dc9c27fe1077f932d2b6a0b32018c429bbb10932cd3c583f804fcda17/pdb2pqr-3.3.2-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,940 Found link https://files.pythonhosted.org/packages/c1/3d/f8603744a97b3a3c267594e27940fd841c118e4524eeab5d4a0168e19c6c/pdb2pqr-3.3.2.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.3.2 2024-01-06T02:26:25,941 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/36/48/3ea2d9687b55e17e941b5ffef0979d405cf92514844adca00b49d4e35ed9/pdb2pqr-3.3.3-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,942 Found link https://files.pythonhosted.org/packages/50/ca/94c0374c856d75adea48a329525815525b36399f96c432d2db9120148560/pdb2pqr-3.3.3.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.3.3 2024-01-06T02:26:25,942 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/90/e5/e7cc5d7f44dc659c5f69ed862bacb974435f5a19559aea2a13c4a86b956f/pdb2pqr-3.4.0-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,943 Found link https://files.pythonhosted.org/packages/12/96/1a9352c33ac2ad956c0a2911362670a0a64ba5f1303f54f464193ce65dc3/pdb2pqr-3.4.0.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.4.0 2024-01-06T02:26:25,944 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/8b/96/f515e275d60a13d83bc4c92a1339278ea8e9edc8ba1e2fcedf3ce96a5c5a/pdb2pqr-3.4.1-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,945 Found link https://files.pythonhosted.org/packages/49/6c/be5f979870cf606a4e3d0827d60fa7f10b98534cd1eca8c24b2fd3856102/pdb2pqr-3.4.1.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.4.1 2024-01-06T02:26:25,946 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/56/e7/e943f10fa4f6d6cdf96222ba4437d10793edfe3ede7bf387b2ce9796da71/pdb2pqr-3.5.0-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,947 Found link https://files.pythonhosted.org/packages/3b/50/ad1ff3a6683dde27b36fe249c0439163e35f281e95dcdacb116bacd21264/pdb2pqr-3.5.0.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.5.0 2024-01-06T02:26:25,947 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/bb/f2/f8e93d9feb653cb53d0b31a47b2beedc4156d560f6405a39311f736a499e/pdb2pqr-3.5.1-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,948 Found link https://files.pythonhosted.org/packages/81/18/0961c47d40e6141479d2badd19b78872b73a3112cd6988a8cedf1fbe86eb/pdb2pqr-3.5.1.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.5.1 2024-01-06T02:26:25,949 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/30/3f/e72aef35acf1c7ecad88ef16558eb59eb743d7b592872bac5932c07a7e45/pdb2pqr-3.5.2-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,949 Found link https://files.pythonhosted.org/packages/94/ad/5e9277de2a2221bbec7f8b0090a46f5e63eadd29cac9f297fe00e3ca465b/pdb2pqr-3.5.2.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.5.2 2024-01-06T02:26:25,950 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/4a/98/2abe9c06edb8dc19bc81ec62d36dd84639dc53899ca6c3aa9dc629e46900/pdb2pqr-3.6.0-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,951 Found link https://files.pythonhosted.org/packages/47/12/82ac3b8c0b4257aa64a043ba02f0c8f99b155cfeaa7cc0ae9bc0b055f9ad/pdb2pqr-3.6.0.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.6.0 2024-01-06T02:26:25,952 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/3a/7c/3bbf1f414f70cbb14b1ee4da74061ae5a0323cd4cb037a76642fa23d2e2f/pdb2pqr-3.6.1-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,953 Found link https://files.pythonhosted.org/packages/c0/c7/1c0359146d4c51c1250f5b37f6edf655692a99f19f307828d9aaa761fd68/pdb2pqr-3.6.1.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.6.1 2024-01-06T02:26:25,953 Skipping link: No binaries permitted for pdb2pqr: https://files.pythonhosted.org/packages/99/05/99a31c4851e3310c8787a9528e2ca3f7ab4d9fc1df78b5d301dd9fbaa4d1/pdb2pqr-3.6.2-py2.py3-none-any.whl (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:25,954 Found link https://files.pythonhosted.org/packages/c9/1e/d69094073b3f805b71594eddaf9ebf90f3d5e07492acc1e7adfccd0ea33d/pdb2pqr-3.6.2.tar.gz (from https://pypi.org/simple/pdb2pqr/) (requires-python:>=3.5), version: 3.6.2 2024-01-06T02:26:25,955 Fetching project page and analyzing links: https://www.piwheels.org/simple/pdb2pqr/ 2024-01-06T02:26:25,955 Getting page https://www.piwheels.org/simple/pdb2pqr/ 2024-01-06T02:26:25,956 Found index url https://www.piwheels.org/simple/ 2024-01-06T02:26:26,130 Fetched page https://www.piwheels.org/simple/pdb2pqr/ as text/html 2024-01-06T02:26:26,135 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.6.1-py2.py3-none-any.whl#sha256=0285ad40c44edb6791dacc4bd1603758e40f1979b2723153bfdf13d12ac9306d (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,136 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.6.0-py2.py3-none-any.whl#sha256=0ecb54ec96d841d7f696daa331530d89f76279f315d2c9b40bdba565adadbcbc (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,136 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.5.2-py2.py3-none-any.whl#sha256=f622cba8f45540c1af9c869d9ffd6b225a64b5ce97357f09781387527378c696 (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,137 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.5.1-py2.py3-none-any.whl#sha256=c38e3e5863e0ecc7feb6d853fb8442c764a0831820bd9a7240aed9a267545573 (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,137 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.5.0-py2.py3-none-any.whl#sha256=1d0185f3350d68f23e18f0f4f2c2d8ad625b2762fc92273b1eaaed7893558ee3 (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,138 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.4.1-py2.py3-none-any.whl#sha256=4e8973c4ca7695b4c84ac65a4a21fb289edf192c67fbdfd2ed90cc41df799b12 (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,138 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.4.0-py2.py3-none-any.whl#sha256=66d51bc3ed423ed50cb937684ad24cf7fd09f3a5fbe2c5c5fb543d8b8b8593d7 (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,139 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.3.3-py2.py3-none-any.whl#sha256=f0ca1a26dd987919923b43c549d287dd1a737e9bf2a3c73e7f1b26d9019d8c8b (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,140 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.3.2-py2.py3-none-any.whl#sha256=bbaecead433479ce317d803f228dfd566fb8b8a8dd873136ea9bbe27c7dffcbd (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,140 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.3.1-py2.py3-none-any.whl#sha256=19e80123ca7c1b04e3819c10d57115c440f15abfd004052ae03226e8b2731f6a (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,141 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.2.3-py2.py3-none-any.whl#sha256=455d630eef5f5f6a1b65686d210d53e978e160a40de89a83d93c4308b7e6099e (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,141 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.2.0-py2.py3-none-any.whl#sha256=7a2f4fe33d3598d52b6895d6635c380179ed5ade036c7b83ee26765336a0b187 (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,142 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.1.0-py2.py3-none-any.whl#sha256=ef058118954eb0d5fc882c23a6ab8cf132f8d6a60409dd8cf022efb3f4d225ef (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,142 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.0.1-py3-none-any.whl#sha256=e59b47a1ba797bb5d830ae52bfdf563c14aa0016c439e3e35cafa3aa22a3e260 (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,143 Skipping link: No binaries permitted for pdb2pqr: https://www.piwheels.org/simple/pdb2pqr/pdb2pqr-3.0.0-py3-none-any.whl#sha256=a02bc4a4de53569304213bc157fcbe9c3c1580dcf7b07aa5c20974ca21550713 (from https://www.piwheels.org/simple/pdb2pqr/) (requires-python:>=3.5) 2024-01-06T02:26:26,143 Skipping link: not a file: https://www.piwheels.org/simple/pdb2pqr/ 2024-01-06T02:26:26,144 Skipping link: not a file: https://pypi.org/simple/pdb2pqr/ 2024-01-06T02:26:26,164 Given no hashes to check 1 links for project 'pdb2pqr': discarding no candidates 2024-01-06T02:26:26,182 Collecting pdb2pqr==3.6.2 2024-01-06T02:26:26,185 Created temporary directory: /tmp/pip-unpack-pk4408on 2024-01-06T02:26:26,670 Downloading pdb2pqr-3.6.2.tar.gz (13.1 MB) 2024-01-06T02:26:32,576 Added pdb2pqr==3.6.2 from https://files.pythonhosted.org/packages/c9/1e/d69094073b3f805b71594eddaf9ebf90f3d5e07492acc1e7adfccd0ea33d/pdb2pqr-3.6.2.tar.gz to build tracker '/tmp/pip-build-tracker-l920aj7h' 2024-01-06T02:26:32,580 Created temporary directory: /tmp/pip-build-env-9lw33lkv 2024-01-06T02:26:32,585 Installing build dependencies: started 2024-01-06T02:26:32,586 Running command pip subprocess to install build dependencies 2024-01-06T02:26:33,764 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-01-06T02:26:34,296 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-06T02:26:35,739 Collecting setuptools>=40.8.0 2024-01-06T02:26:35,754 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl (819 kB) 2024-01-06T02:26:35,977 Collecting wheel 2024-01-06T02:26:35,991 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-01-06T02:26:38,558 Installing collected packages: wheel, setuptools 2024-01-06T02:26:38,782 Creating /tmp/pip-build-env-9lw33lkv/overlay/local/bin 2024-01-06T02:26:38,784 changing mode of /tmp/pip-build-env-9lw33lkv/overlay/local/bin/wheel to 755 2024-01-06T02:26:41,043 Successfully installed setuptools-69.0.3 wheel-0.42.0 2024-01-06T02:26:41,323 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-06T02:26:41,324 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-06T02:26:41,591 Installing build dependencies: finished with status 'done' 2024-01-06T02:26:41,594 Getting requirements to build wheel: started 2024-01-06T02:26:41,596 Running command Getting requirements to build wheel 2024-01-06T02:26:42,132 running egg_info 2024-01-06T02:26:42,137 writing pdb2pqr.egg-info/PKG-INFO 2024-01-06T02:26:42,142 writing dependency_links to pdb2pqr.egg-info/dependency_links.txt 2024-01-06T02:26:42,144 writing entry points to pdb2pqr.egg-info/entry_points.txt 2024-01-06T02:26:42,146 writing requirements to pdb2pqr.egg-info/requires.txt 2024-01-06T02:26:42,147 writing top-level names to pdb2pqr.egg-info/top_level.txt 2024-01-06T02:26:42,175 reading manifest file 'pdb2pqr.egg-info/SOURCES.txt' 2024-01-06T02:26:42,191 reading manifest template 'MANIFEST.in' 2024-01-06T02:26:42,468 adding license file 'LICENSE.md' 2024-01-06T02:26:42,468 adding license file 'COPYING' 2024-01-06T02:26:42,476 writing manifest file 'pdb2pqr.egg-info/SOURCES.txt' 2024-01-06T02:26:42,553 Getting requirements to build wheel: finished with status 'done' 2024-01-06T02:26:42,563 Created temporary directory: /tmp/pip-modern-metadata-twpb9qgz 2024-01-06T02:26:42,565 Preparing metadata (pyproject.toml): started 2024-01-06T02:26:42,566 Running command Preparing metadata (pyproject.toml) 2024-01-06T02:26:43,085 running dist_info 2024-01-06T02:26:43,104 creating /tmp/pip-modern-metadata-twpb9qgz/pdb2pqr.egg-info 2024-01-06T02:26:43,109 writing /tmp/pip-modern-metadata-twpb9qgz/pdb2pqr.egg-info/PKG-INFO 2024-01-06T02:26:43,114 writing dependency_links to /tmp/pip-modern-metadata-twpb9qgz/pdb2pqr.egg-info/dependency_links.txt 2024-01-06T02:26:43,116 writing entry points to /tmp/pip-modern-metadata-twpb9qgz/pdb2pqr.egg-info/entry_points.txt 2024-01-06T02:26:43,119 writing requirements to /tmp/pip-modern-metadata-twpb9qgz/pdb2pqr.egg-info/requires.txt 2024-01-06T02:26:43,120 writing top-level names to /tmp/pip-modern-metadata-twpb9qgz/pdb2pqr.egg-info/top_level.txt 2024-01-06T02:26:43,121 writing manifest file '/tmp/pip-modern-metadata-twpb9qgz/pdb2pqr.egg-info/SOURCES.txt' 2024-01-06T02:26:43,145 reading manifest file '/tmp/pip-modern-metadata-twpb9qgz/pdb2pqr.egg-info/SOURCES.txt' 2024-01-06T02:26:43,147 reading manifest template 'MANIFEST.in' 2024-01-06T02:26:43,435 adding license file 'LICENSE.md' 2024-01-06T02:26:43,435 adding license file 'COPYING' 2024-01-06T02:26:43,441 writing manifest file '/tmp/pip-modern-metadata-twpb9qgz/pdb2pqr.egg-info/SOURCES.txt' 2024-01-06T02:26:43,443 creating '/tmp/pip-modern-metadata-twpb9qgz/pdb2pqr-3.6.2.dist-info' 2024-01-06T02:26:43,639 Preparing metadata (pyproject.toml): finished with status 'done' 2024-01-06T02:26:43,644 Source in /tmp/pip-wheel-c17gxy8x/pdb2pqr_c3a1ad3ea1084c8aa062665f71218d61 has version 3.6.2, which satisfies requirement pdb2pqr==3.6.2 from https://files.pythonhosted.org/packages/c9/1e/d69094073b3f805b71594eddaf9ebf90f3d5e07492acc1e7adfccd0ea33d/pdb2pqr-3.6.2.tar.gz 2024-01-06T02:26:43,645 Removed pdb2pqr==3.6.2 from https://files.pythonhosted.org/packages/c9/1e/d69094073b3f805b71594eddaf9ebf90f3d5e07492acc1e7adfccd0ea33d/pdb2pqr-3.6.2.tar.gz from build tracker '/tmp/pip-build-tracker-l920aj7h' 2024-01-06T02:26:43,652 Created temporary directory: /tmp/pip-unpack-cs11u3xe 2024-01-06T02:26:43,653 Created temporary directory: /tmp/pip-unpack-ex6zb67a 2024-01-06T02:26:43,682 Building wheels for collected packages: pdb2pqr 2024-01-06T02:26:43,687 Created temporary directory: /tmp/pip-wheel-6116wlmv 2024-01-06T02:26:43,687 Destination directory: /tmp/pip-wheel-6116wlmv 2024-01-06T02:26:43,689 Building wheel for pdb2pqr (pyproject.toml): started 2024-01-06T02:26:43,691 Running command Building wheel for pdb2pqr (pyproject.toml) 2024-01-06T02:26:44,234 running bdist_wheel 2024-01-06T02:26:44,278 running build 2024-01-06T02:26:44,279 running build_py 2024-01-06T02:26:44,287 creating build 2024-01-06T02:26:44,287 creating build/lib 2024-01-06T02:26:44,288 creating build/lib/pdb2pqr 2024-01-06T02:26:44,290 copying pdb2pqr/na.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,292 copying pdb2pqr/_version.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,294 copying pdb2pqr/aa.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,297 copying pdb2pqr/utilities.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,299 copying pdb2pqr/cif.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,302 copying pdb2pqr/structures.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,304 copying pdb2pqr/quatfit.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,306 copying pdb2pqr/psize.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,309 copying pdb2pqr/__init__.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,310 copying pdb2pqr/definitions.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,312 copying pdb2pqr/run.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,314 copying pdb2pqr/inputgen.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,316 copying pdb2pqr/forcefield.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,319 copying pdb2pqr/io.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,322 copying pdb2pqr/cells.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,323 copying pdb2pqr/__main__.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,325 copying pdb2pqr/pdb.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,329 copying pdb2pqr/main.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,331 copying pdb2pqr/biomolecule.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,334 copying pdb2pqr/config.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,336 copying pdb2pqr/topology.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,338 copying pdb2pqr/debump.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,341 copying pdb2pqr/residue.py -> build/lib/pdb2pqr 2024-01-06T02:26:44,343 creating build/lib/pdb2pqr/hydrogens 2024-01-06T02:26:44,344 copying pdb2pqr/hydrogens/optimize.py -> build/lib/pdb2pqr/hydrogens 2024-01-06T02:26:44,347 copying pdb2pqr/hydrogens/structures.py -> build/lib/pdb2pqr/hydrogens 2024-01-06T02:26:44,350 copying pdb2pqr/hydrogens/__init__.py -> build/lib/pdb2pqr/hydrogens 2024-01-06T02:26:44,353 creating build/lib/pdb2pqr/ligand 2024-01-06T02:26:44,354 copying pdb2pqr/ligand/peoe.py -> build/lib/pdb2pqr/ligand 2024-01-06T02:26:44,356 copying pdb2pqr/ligand/__init__.py -> build/lib/pdb2pqr/ligand 2024-01-06T02:26:44,358 copying pdb2pqr/ligand/topology.py -> build/lib/pdb2pqr/ligand 2024-01-06T02:26:44,360 copying pdb2pqr/ligand/mol2.py -> build/lib/pdb2pqr/ligand 2024-01-06T02:26:44,366 creating build/lib/pdb2pqr/dat 2024-01-06T02:26:44,367 copying pdb2pqr/dat/AA.xml -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,371 copying pdb2pqr/dat/NA.xml -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,374 copying pdb2pqr/dat/HYDROGENS.xml -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,376 copying pdb2pqr/dat/TOPOLOGY.xml -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,379 copying pdb2pqr/dat/PATCHES.xml -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,382 copying pdb2pqr/dat/PEOEPB.DAT -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,385 copying pdb2pqr/dat/CHARMM.DAT -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,388 copying pdb2pqr/dat/AMBER.DAT -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,392 copying pdb2pqr/dat/SWANSON.DAT -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,395 copying pdb2pqr/dat/PARSE.DAT -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,398 copying pdb2pqr/dat/TYL06.DAT -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,402 copying pdb2pqr/dat/PEOEPB.names -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,404 copying pdb2pqr/dat/SWANSON.names -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,406 copying pdb2pqr/dat/PARSE.names -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,408 copying pdb2pqr/dat/TYL06.names -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,411 copying pdb2pqr/dat/CHARMM.names -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,413 copying pdb2pqr/dat/AMBER.names -> build/lib/pdb2pqr/dat 2024-01-06T02:26:44,428 installing to build/bdist.linux-armv7l/wheel 2024-01-06T02:26:44,428 running install 2024-01-06T02:26:44,452 running install_lib 2024-01-06T02:26:44,459 creating build/bdist.linux-armv7l 2024-01-06T02:26:44,459 creating build/bdist.linux-armv7l/wheel 2024-01-06T02:26:44,462 creating build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,463 copying build/lib/pdb2pqr/na.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,465 copying build/lib/pdb2pqr/_version.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,467 creating build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,468 copying build/lib/pdb2pqr/dat/AA.xml -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,471 copying build/lib/pdb2pqr/dat/PEOEPB.names -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,473 copying build/lib/pdb2pqr/dat/PEOEPB.DAT -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,475 copying build/lib/pdb2pqr/dat/CHARMM.DAT -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,478 copying build/lib/pdb2pqr/dat/SWANSON.names -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,480 copying build/lib/pdb2pqr/dat/PARSE.names -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,482 copying build/lib/pdb2pqr/dat/AMBER.DAT -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,486 copying build/lib/pdb2pqr/dat/TYL06.names -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,487 copying build/lib/pdb2pqr/dat/NA.xml -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,490 copying build/lib/pdb2pqr/dat/CHARMM.names -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,492 copying build/lib/pdb2pqr/dat/SWANSON.DAT -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,495 copying build/lib/pdb2pqr/dat/PARSE.DAT -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,498 copying build/lib/pdb2pqr/dat/HYDROGENS.xml -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,500 copying build/lib/pdb2pqr/dat/TYL06.DAT -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,504 copying build/lib/pdb2pqr/dat/TOPOLOGY.xml -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,507 copying build/lib/pdb2pqr/dat/PATCHES.xml -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,510 copying build/lib/pdb2pqr/dat/AMBER.names -> build/bdist.linux-armv7l/wheel/pdb2pqr/dat 2024-01-06T02:26:44,512 creating build/bdist.linux-armv7l/wheel/pdb2pqr/hydrogens 2024-01-06T02:26:44,513 copying build/lib/pdb2pqr/hydrogens/optimize.py -> build/bdist.linux-armv7l/wheel/pdb2pqr/hydrogens 2024-01-06T02:26:44,516 copying build/lib/pdb2pqr/hydrogens/structures.py -> build/bdist.linux-armv7l/wheel/pdb2pqr/hydrogens 2024-01-06T02:26:44,519 copying build/lib/pdb2pqr/hydrogens/__init__.py -> build/bdist.linux-armv7l/wheel/pdb2pqr/hydrogens 2024-01-06T02:26:44,522 copying build/lib/pdb2pqr/aa.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,525 copying build/lib/pdb2pqr/utilities.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,527 copying build/lib/pdb2pqr/cif.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,530 copying build/lib/pdb2pqr/structures.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,533 copying build/lib/pdb2pqr/quatfit.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,535 copying build/lib/pdb2pqr/psize.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,538 copying build/lib/pdb2pqr/__init__.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,539 copying build/lib/pdb2pqr/definitions.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,542 copying build/lib/pdb2pqr/run.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,545 copying build/lib/pdb2pqr/inputgen.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,547 copying build/lib/pdb2pqr/forcefield.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,550 copying build/lib/pdb2pqr/io.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,552 copying build/lib/pdb2pqr/cells.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,554 copying build/lib/pdb2pqr/__main__.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,556 copying build/lib/pdb2pqr/pdb.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,560 copying build/lib/pdb2pqr/main.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,563 copying build/lib/pdb2pqr/biomolecule.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,565 copying build/lib/pdb2pqr/config.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,568 creating build/bdist.linux-armv7l/wheel/pdb2pqr/ligand 2024-01-06T02:26:44,569 copying build/lib/pdb2pqr/ligand/peoe.py -> build/bdist.linux-armv7l/wheel/pdb2pqr/ligand 2024-01-06T02:26:44,571 copying build/lib/pdb2pqr/ligand/__init__.py -> build/bdist.linux-armv7l/wheel/pdb2pqr/ligand 2024-01-06T02:26:44,573 copying build/lib/pdb2pqr/ligand/topology.py -> build/bdist.linux-armv7l/wheel/pdb2pqr/ligand 2024-01-06T02:26:44,574 copying build/lib/pdb2pqr/ligand/mol2.py -> build/bdist.linux-armv7l/wheel/pdb2pqr/ligand 2024-01-06T02:26:44,577 copying build/lib/pdb2pqr/topology.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,579 copying build/lib/pdb2pqr/debump.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,582 copying build/lib/pdb2pqr/residue.py -> build/bdist.linux-armv7l/wheel/pdb2pqr 2024-01-06T02:26:44,584 running install_egg_info 2024-01-06T02:26:44,595 running egg_info 2024-01-06T02:26:44,599 writing pdb2pqr.egg-info/PKG-INFO 2024-01-06T02:26:44,604 writing dependency_links to pdb2pqr.egg-info/dependency_links.txt 2024-01-06T02:26:44,605 writing entry points to pdb2pqr.egg-info/entry_points.txt 2024-01-06T02:26:44,607 writing requirements to pdb2pqr.egg-info/requires.txt 2024-01-06T02:26:44,608 writing top-level names to pdb2pqr.egg-info/top_level.txt 2024-01-06T02:26:44,620 reading manifest file 'pdb2pqr.egg-info/SOURCES.txt' 2024-01-06T02:26:44,625 reading manifest template 'MANIFEST.in' 2024-01-06T02:26:44,898 adding license file 'LICENSE.md' 2024-01-06T02:26:44,898 adding license file 'COPYING' 2024-01-06T02:26:44,906 writing manifest file 'pdb2pqr.egg-info/SOURCES.txt' 2024-01-06T02:26:44,908 Copying pdb2pqr.egg-info to build/bdist.linux-armv7l/wheel/pdb2pqr-3.6.2-py3.11.egg-info 2024-01-06T02:26:44,919 running install_scripts 2024-01-06T02:26:44,936 creating build/bdist.linux-armv7l/wheel/pdb2pqr-3.6.2.dist-info/WHEEL 2024-01-06T02:26:44,939 creating '/tmp/pip-wheel-6116wlmv/.tmp-tktc8fse/pdb2pqr-3.6.2-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-06T02:26:44,941 adding 'pdb2pqr/__init__.py' 2024-01-06T02:26:44,943 adding 'pdb2pqr/__main__.py' 2024-01-06T02:26:44,944 adding 'pdb2pqr/_version.py' 2024-01-06T02:26:44,947 adding 'pdb2pqr/aa.py' 2024-01-06T02:26:44,952 adding 'pdb2pqr/biomolecule.py' 2024-01-06T02:26:44,954 adding 'pdb2pqr/cells.py' 2024-01-06T02:26:44,958 adding 'pdb2pqr/cif.py' 2024-01-06T02:26:44,959 adding 'pdb2pqr/config.py' 2024-01-06T02:26:44,962 adding 'pdb2pqr/debump.py' 2024-01-06T02:26:44,964 adding 'pdb2pqr/definitions.py' 2024-01-06T02:26:44,967 adding 'pdb2pqr/forcefield.py' 2024-01-06T02:26:44,969 adding 'pdb2pqr/inputgen.py' 2024-01-06T02:26:44,972 adding 'pdb2pqr/io.py' 2024-01-06T02:26:44,976 adding 'pdb2pqr/main.py' 2024-01-06T02:26:44,978 adding 'pdb2pqr/na.py' 2024-01-06T02:26:44,986 adding 'pdb2pqr/pdb.py' 2024-01-06T02:26:44,989 adding 'pdb2pqr/psize.py' 2024-01-06T02:26:44,992 adding 'pdb2pqr/quatfit.py' 2024-01-06T02:26:44,994 adding 'pdb2pqr/residue.py' 2024-01-06T02:26:44,996 adding 'pdb2pqr/run.py' 2024-01-06T02:26:44,998 adding 'pdb2pqr/structures.py' 2024-01-06T02:26:44,999 adding 'pdb2pqr/topology.py' 2024-01-06T02:26:45,001 adding 'pdb2pqr/utilities.py' 2024-01-06T02:26:45,006 adding 'pdb2pqr/dat/AA.xml' 2024-01-06T02:26:45,013 adding 'pdb2pqr/dat/AMBER.DAT' 2024-01-06T02:26:45,015 adding 'pdb2pqr/dat/AMBER.names' 2024-01-06T02:26:45,022 adding 'pdb2pqr/dat/CHARMM.DAT' 2024-01-06T02:26:45,024 adding 'pdb2pqr/dat/CHARMM.names' 2024-01-06T02:26:45,025 adding 'pdb2pqr/dat/HYDROGENS.xml' 2024-01-06T02:26:45,028 adding 'pdb2pqr/dat/NA.xml' 2024-01-06T02:26:45,030 adding 'pdb2pqr/dat/PARSE.DAT' 2024-01-06T02:26:45,032 adding 'pdb2pqr/dat/PARSE.names' 2024-01-06T02:26:45,034 adding 'pdb2pqr/dat/PATCHES.xml' 2024-01-06T02:26:45,039 adding 'pdb2pqr/dat/PEOEPB.DAT' 2024-01-06T02:26:45,040 adding 'pdb2pqr/dat/PEOEPB.names' 2024-01-06T02:26:45,046 adding 'pdb2pqr/dat/SWANSON.DAT' 2024-01-06T02:26:45,047 adding 'pdb2pqr/dat/SWANSON.names' 2024-01-06T02:26:45,051 adding 'pdb2pqr/dat/TOPOLOGY.xml' 2024-01-06T02:26:45,061 adding 'pdb2pqr/dat/TYL06.DAT' 2024-01-06T02:26:45,063 adding 'pdb2pqr/dat/TYL06.names' 2024-01-06T02:26:45,067 adding 'pdb2pqr/hydrogens/__init__.py' 2024-01-06T02:26:45,070 adding 'pdb2pqr/hydrogens/optimize.py' 2024-01-06T02:26:45,075 adding 'pdb2pqr/hydrogens/structures.py' 2024-01-06T02:26:45,078 adding 'pdb2pqr/ligand/__init__.py' 2024-01-06T02:26:45,080 adding 'pdb2pqr/ligand/mol2.py' 2024-01-06T02:26:45,082 adding 'pdb2pqr/ligand/peoe.py' 2024-01-06T02:26:45,084 adding 'pdb2pqr/ligand/topology.py' 2024-01-06T02:26:45,086 adding 'pdb2pqr-3.6.2.dist-info/COPYING' 2024-01-06T02:26:45,087 adding 'pdb2pqr-3.6.2.dist-info/LICENSE.md' 2024-01-06T02:26:45,088 adding 'pdb2pqr-3.6.2.dist-info/METADATA' 2024-01-06T02:26:45,089 adding 'pdb2pqr-3.6.2.dist-info/WHEEL' 2024-01-06T02:26:45,090 adding 'pdb2pqr-3.6.2.dist-info/entry_points.txt' 2024-01-06T02:26:45,091 adding 'pdb2pqr-3.6.2.dist-info/top_level.txt' 2024-01-06T02:26:45,093 adding 'pdb2pqr-3.6.2.dist-info/RECORD' 2024-01-06T02:26:45,097 removing build/bdist.linux-armv7l/wheel 2024-01-06T02:26:45,199 Building wheel for pdb2pqr (pyproject.toml): finished with status 'done' 2024-01-06T02:26:45,207 Created wheel for pdb2pqr: filename=pdb2pqr-3.6.2-py2.py3-none-any.whl size=206896 sha256=d4a0e9114a1983969b5171f32e72c21b4664037ea1f1b6abbc984377a517dc6e 2024-01-06T02:26:45,208 Stored in directory: /tmp/pip-ephem-wheel-cache-279dbsfq/wheels/70/7a/d2/c612d4348296de1b21997e38593be81573b36a9cbfbe80ddcc 2024-01-06T02:26:45,220 Successfully built pdb2pqr 2024-01-06T02:26:45,230 Removed build tracker: '/tmp/pip-build-tracker-l920aj7h'