2024-01-06T02:59:46,821 Created temporary directory: /tmp/pip-build-tracker-r6_tj6kz 2024-01-06T02:59:46,822 Initialized build tracking at /tmp/pip-build-tracker-r6_tj6kz 2024-01-06T02:59:46,823 Created build tracker: /tmp/pip-build-tracker-r6_tj6kz 2024-01-06T02:59:46,823 Entered build tracker: /tmp/pip-build-tracker-r6_tj6kz 2024-01-06T02:59:46,825 Created temporary directory: /tmp/pip-wheel-891d476l 2024-01-06T02:59:46,828 Created temporary directory: /tmp/pip-ephem-wheel-cache-z11b7__g 2024-01-06T02:59:46,852 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-06T02:59:46,856 2 location(s) to search for versions of brainglobe-workflows: 2024-01-06T02:59:46,856 * https://pypi.org/simple/brainglobe-workflows/ 2024-01-06T02:59:46,856 * https://www.piwheels.org/simple/brainglobe-workflows/ 2024-01-06T02:59:46,857 Fetching project page and analyzing links: https://pypi.org/simple/brainglobe-workflows/ 2024-01-06T02:59:46,857 Getting page https://pypi.org/simple/brainglobe-workflows/ 2024-01-06T02:59:46,859 Found index url https://pypi.org/simple/ 2024-01-06T02:59:47,103 Fetched page https://pypi.org/simple/brainglobe-workflows/ as application/vnd.pypi.simple.v1+json 2024-01-06T02:59:47,105 Found link https://files.pythonhosted.org/packages/86/ff/7475753a7ca5ced322da02ae703996835522e454697fda6be04040de6f3b/brainglobe-workflows-1.0.0.tar.gz (from https://pypi.org/simple/brainglobe-workflows/) (requires-python:>=3.9), version: 1.0.0 2024-01-06T02:59:47,106 Skipping link: No binaries permitted for brainglobe-workflows: https://files.pythonhosted.org/packages/fd/3d/3ba19433653c5f8e4e1fefb3453ff6c6fb161c65970589784ad8d493dfc4/brainglobe_workflows-1.0.0-py3-none-any.whl (from https://pypi.org/simple/brainglobe-workflows/) (requires-python:>=3.9) 2024-01-06T02:59:47,107 Found link https://files.pythonhosted.org/packages/2c/2c/63316da6fb3b7dea22844058c8c2afe92c387a0039f8ed964336584dfd69/brainglobe-workflows-1.1.0.tar.gz (from https://pypi.org/simple/brainglobe-workflows/) (requires-python:>=3.9), version: 1.1.0 2024-01-06T02:59:47,107 Skipping link: No binaries permitted for brainglobe-workflows: https://files.pythonhosted.org/packages/d4/e7/ce8124540814aceaad9c50c8976531f4e3d9e648ecedf4f5bfe4646b777a/brainglobe_workflows-1.1.0-py3-none-any.whl (from https://pypi.org/simple/brainglobe-workflows/) (requires-python:>=3.9) 2024-01-06T02:59:47,108 Fetching project page and analyzing links: https://www.piwheels.org/simple/brainglobe-workflows/ 2024-01-06T02:59:47,109 Getting page https://www.piwheels.org/simple/brainglobe-workflows/ 2024-01-06T02:59:47,110 Found index url https://www.piwheels.org/simple/ 2024-01-06T02:59:47,263 Fetched page https://www.piwheels.org/simple/brainglobe-workflows/ as text/html 2024-01-06T02:59:47,265 Skipping link: No binaries permitted for brainglobe-workflows: https://www.piwheels.org/simple/brainglobe-workflows/brainglobe_workflows-1.0.0-py3-none-any.whl#sha256=9875e2cf8c7d6256d90d8026fec7102f19d325dd8480202f52100052a04dfcaf (from https://www.piwheels.org/simple/brainglobe-workflows/) (requires-python:>=3.9) 2024-01-06T02:59:47,266 Skipping link: not a file: https://www.piwheels.org/simple/brainglobe-workflows/ 2024-01-06T02:59:47,266 Skipping link: not a file: https://pypi.org/simple/brainglobe-workflows/ 2024-01-06T02:59:47,284 Given no hashes to check 1 links for project 'brainglobe-workflows': discarding no candidates 2024-01-06T02:59:47,302 Collecting brainglobe-workflows==1.1.0 2024-01-06T02:59:47,304 Created temporary directory: /tmp/pip-unpack-83szsyv9 2024-01-06T02:59:47,511 Downloading brainglobe-workflows-1.1.0.tar.gz (39 kB) 2024-01-06T02:59:47,617 Added brainglobe-workflows==1.1.0 from https://files.pythonhosted.org/packages/2c/2c/63316da6fb3b7dea22844058c8c2afe92c387a0039f8ed964336584dfd69/brainglobe-workflows-1.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-r6_tj6kz' 2024-01-06T02:59:47,626 Created temporary directory: /tmp/pip-build-env-5c593_vh 2024-01-06T02:59:47,630 Installing build dependencies: started 2024-01-06T02:59:47,631 Running command pip subprocess to install build dependencies 2024-01-06T02:59:48,761 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-01-06T02:59:49,279 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-06T02:59:50,728 Collecting setuptools>=45 2024-01-06T02:59:50,743 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl (819 kB) 2024-01-06T02:59:50,969 Collecting wheel 2024-01-06T02:59:50,984 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-01-06T02:59:51,292 Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2) 2024-01-06T02:59:51,306 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2024-01-06T02:59:51,648 Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-01-06T02:59:51,662 Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB) 2024-01-06T02:59:51,771 Collecting typing-extensions (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-01-06T02:59:51,784 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.9.0-py3-none-any.whl (32 kB) 2024-01-06T02:59:54,315 Installing collected packages: wheel, typing-extensions, setuptools, packaging, setuptools_scm 2024-01-06T02:59:54,544 Creating /tmp/pip-build-env-5c593_vh/overlay/local/bin 2024-01-06T02:59:54,546 changing mode of /tmp/pip-build-env-5c593_vh/overlay/local/bin/wheel to 755 2024-01-06T02:59:57,194 Successfully installed packaging-23.2 setuptools-69.0.3 setuptools_scm-8.0.4 typing-extensions-4.9.0 wheel-0.42.0 2024-01-06T02:59:57,475 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-06T02:59:57,476 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-06T02:59:57,764 Installing build dependencies: finished with status 'done' 2024-01-06T02:59:57,767 Getting requirements to build wheel: started 2024-01-06T02:59:57,768 Running command Getting requirements to build wheel 2024-01-06T02:59:58,691 running egg_info 2024-01-06T02:59:58,696 writing brainglobe_workflows.egg-info/PKG-INFO 2024-01-06T02:59:58,705 writing dependency_links to brainglobe_workflows.egg-info/dependency_links.txt 2024-01-06T02:59:58,707 writing entry points to brainglobe_workflows.egg-info/entry_points.txt 2024-01-06T02:59:58,712 writing requirements to brainglobe_workflows.egg-info/requires.txt 2024-01-06T02:59:58,713 writing top-level names to brainglobe_workflows.egg-info/top_level.txt 2024-01-06T02:59:58,750 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-01-06T02:59:58,754 reading manifest file 'brainglobe_workflows.egg-info/SOURCES.txt' 2024-01-06T02:59:58,757 reading manifest template 'MANIFEST.in' 2024-01-06T02:59:58,758 warning: no previously-included files found matching '.pre-commit-config.yaml' 2024-01-06T02:59:58,759 warning: no previously-included files found matching '*.yaml' 2024-01-06T02:59:58,760 warning: no previously-included files found matching '*.yml' 2024-01-06T02:59:58,761 warning: no previously-included files found matching 'Dockerfile' 2024-01-06T02:59:58,761 warning: no previously-included files found matching '*.ini' 2024-01-06T02:59:58,776 warning: no previously-included files matching '*' found under directory 'benchmarks/results' 2024-01-06T02:59:58,777 warning: no previously-included files matching '__pycache__' found under directory '*' 2024-01-06T02:59:58,778 warning: no previously-included files matching '*.py[co]' found under directory '*' 2024-01-06T02:59:58,784 warning: no files found matching '*.pxd' anywhere in distribution 2024-01-06T02:59:58,785 no previously-included directories found matching 'docs' 2024-01-06T02:59:58,786 no previously-included directories found matching 'tests' 2024-01-06T02:59:58,786 no previously-included directories found matching 'resources' 2024-01-06T02:59:58,787 no previously-included directories found matching '.github' 2024-01-06T02:59:58,788 no previously-included directories found matching '.tox' 2024-01-06T02:59:58,789 adding license file 'LICENSE' 2024-01-06T02:59:58,791 writing manifest file 'brainglobe_workflows.egg-info/SOURCES.txt' 2024-01-06T02:59:58,917 Getting requirements to build wheel: finished with status 'done' 2024-01-06T02:59:58,926 Created temporary directory: /tmp/pip-modern-metadata-jr0mfif2 2024-01-06T02:59:58,928 Preparing metadata (pyproject.toml): started 2024-01-06T02:59:58,929 Running command Preparing metadata (pyproject.toml) 2024-01-06T02:59:59,785 running dist_info 2024-01-06T02:59:59,791 creating /tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows.egg-info 2024-01-06T02:59:59,796 writing /tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows.egg-info/PKG-INFO 2024-01-06T02:59:59,805 writing dependency_links to /tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows.egg-info/dependency_links.txt 2024-01-06T02:59:59,807 writing entry points to /tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows.egg-info/entry_points.txt 2024-01-06T02:59:59,811 writing requirements to /tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows.egg-info/requires.txt 2024-01-06T02:59:59,812 writing top-level names to /tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows.egg-info/top_level.txt 2024-01-06T02:59:59,813 writing manifest file '/tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows.egg-info/SOURCES.txt' 2024-01-06T02:59:59,847 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-01-06T02:59:59,850 reading manifest file '/tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows.egg-info/SOURCES.txt' 2024-01-06T02:59:59,852 reading manifest template 'MANIFEST.in' 2024-01-06T02:59:59,853 warning: no previously-included files found matching '.pre-commit-config.yaml' 2024-01-06T02:59:59,854 warning: no previously-included files found matching '*.yaml' 2024-01-06T02:59:59,855 warning: no previously-included files found matching '*.yml' 2024-01-06T02:59:59,855 warning: no previously-included files found matching 'Dockerfile' 2024-01-06T02:59:59,856 warning: no previously-included files found matching '*.ini' 2024-01-06T02:59:59,870 warning: no previously-included files matching '*' found under directory 'benchmarks/results' 2024-01-06T02:59:59,871 warning: no previously-included files matching '__pycache__' found under directory '*' 2024-01-06T02:59:59,872 warning: no previously-included files matching '*.py[co]' found under directory '*' 2024-01-06T02:59:59,878 warning: no files found matching '*.pxd' anywhere in distribution 2024-01-06T02:59:59,878 no previously-included directories found matching 'docs' 2024-01-06T02:59:59,879 no previously-included directories found matching 'tests' 2024-01-06T02:59:59,880 no previously-included directories found matching 'resources' 2024-01-06T02:59:59,880 no previously-included directories found matching '.github' 2024-01-06T02:59:59,881 no previously-included directories found matching '.tox' 2024-01-06T02:59:59,882 adding license file 'LICENSE' 2024-01-06T02:59:59,883 writing manifest file '/tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows.egg-info/SOURCES.txt' 2024-01-06T02:59:59,884 creating '/tmp/pip-modern-metadata-jr0mfif2/brainglobe_workflows-1.1.0.dist-info' 2024-01-06T03:00:00,053 Preparing metadata (pyproject.toml): finished with status 'done' 2024-01-06T03:00:00,058 Source in /tmp/pip-wheel-891d476l/brainglobe-workflows_d7dceb2e59af411391f406713acd0651 has version 1.1.0, which satisfies requirement brainglobe-workflows==1.1.0 from https://files.pythonhosted.org/packages/2c/2c/63316da6fb3b7dea22844058c8c2afe92c387a0039f8ed964336584dfd69/brainglobe-workflows-1.1.0.tar.gz 2024-01-06T03:00:00,059 Removed brainglobe-workflows==1.1.0 from https://files.pythonhosted.org/packages/2c/2c/63316da6fb3b7dea22844058c8c2afe92c387a0039f8ed964336584dfd69/brainglobe-workflows-1.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-r6_tj6kz' 2024-01-06T03:00:00,066 Created temporary directory: /tmp/pip-unpack-r7mpoex5 2024-01-06T03:00:00,068 Created temporary directory: /tmp/pip-unpack-dzk1mv95 2024-01-06T03:00:00,127 Building wheels for collected packages: brainglobe-workflows 2024-01-06T03:00:00,131 Created temporary directory: /tmp/pip-wheel-xndeuvdw 2024-01-06T03:00:00,131 Destination directory: /tmp/pip-wheel-xndeuvdw 2024-01-06T03:00:00,133 Building wheel for brainglobe-workflows (pyproject.toml): started 2024-01-06T03:00:00,135 Running command Building wheel for brainglobe-workflows (pyproject.toml) 2024-01-06T03:00:00,985 running bdist_wheel 2024-01-06T03:00:01,007 running build 2024-01-06T03:00:01,008 running build_py 2024-01-06T03:00:01,014 creating build 2024-01-06T03:00:01,015 creating build/lib 2024-01-06T03:00:01,016 creating build/lib/brainglobe_workflows 2024-01-06T03:00:01,017 copying brainglobe_workflows/__init__.py -> build/lib/brainglobe_workflows 2024-01-06T03:00:01,018 copying brainglobe_workflows/utils.py -> build/lib/brainglobe_workflows 2024-01-06T03:00:01,020 running egg_info 2024-01-06T03:00:01,024 writing brainglobe_workflows.egg-info/PKG-INFO 2024-01-06T03:00:01,033 writing dependency_links to brainglobe_workflows.egg-info/dependency_links.txt 2024-01-06T03:00:01,034 writing entry points to brainglobe_workflows.egg-info/entry_points.txt 2024-01-06T03:00:01,038 writing requirements to brainglobe_workflows.egg-info/requires.txt 2024-01-06T03:00:01,039 writing top-level names to brainglobe_workflows.egg-info/top_level.txt 2024-01-06T03:00:01,064 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-01-06T03:00:01,067 reading manifest file 'brainglobe_workflows.egg-info/SOURCES.txt' 2024-01-06T03:00:01,070 reading manifest template 'MANIFEST.in' 2024-01-06T03:00:01,071 warning: no previously-included files found matching '.pre-commit-config.yaml' 2024-01-06T03:00:01,072 warning: no previously-included files found matching '*.yaml' 2024-01-06T03:00:01,072 warning: no previously-included files found matching '*.yml' 2024-01-06T03:00:01,073 warning: no previously-included files found matching 'Dockerfile' 2024-01-06T03:00:01,073 warning: no previously-included files found matching '*.ini' 2024-01-06T03:00:01,089 warning: no previously-included files matching '*' found under directory 'benchmarks/results' 2024-01-06T03:00:01,090 warning: no previously-included files matching '__pycache__' found under directory '*' 2024-01-06T03:00:01,091 warning: no previously-included files matching '*.py[co]' found under directory '*' 2024-01-06T03:00:01,099 warning: no files found matching '*.pxd' anywhere in distribution 2024-01-06T03:00:01,100 no previously-included directories found matching 'docs' 2024-01-06T03:00:01,101 no previously-included directories found matching 'tests' 2024-01-06T03:00:01,102 no previously-included directories found matching 'resources' 2024-01-06T03:00:01,102 no previously-included directories found matching '.github' 2024-01-06T03:00:01,103 no previously-included directories found matching '.tox' 2024-01-06T03:00:01,103 adding license file 'LICENSE' 2024-01-06T03:00:01,105 writing manifest file 'brainglobe_workflows.egg-info/SOURCES.txt' 2024-01-06T03:00:01,107 /tmp/pip-build-env-5c593_vh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'brainglobe_workflows.brainmapper' is absent from the `packages` configuration. 2024-01-06T03:00:01,108 !! 2024-01-06T03:00:01,109 ******************************************************************************** 2024-01-06T03:00:01,110 ############################ 2024-01-06T03:00:01,110 # Package would be ignored # 2024-01-06T03:00:01,111 ############################ 2024-01-06T03:00:01,112 Python recognizes 'brainglobe_workflows.brainmapper' as an importable package[^1], 2024-01-06T03:00:01,112 but it is absent from setuptools' `packages` configuration. 2024-01-06T03:00:01,114 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-06T03:00:01,114 package, please make sure that 'brainglobe_workflows.brainmapper' is explicitly added 2024-01-06T03:00:01,115 to the `packages` configuration field. 2024-01-06T03:00:01,116 Alternatively, you can also rely on setuptools' discovery methods 2024-01-06T03:00:01,116 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-06T03:00:01,117 instead of `find_packages(...)`/`find:`). 2024-01-06T03:00:01,118 You can read more about "package discovery" on setuptools documentation page: 2024-01-06T03:00:01,118 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-06T03:00:01,119 If you don't want 'brainglobe_workflows.brainmapper' to be distributed and are 2024-01-06T03:00:01,120 already explicitly excluding 'brainglobe_workflows.brainmapper' via 2024-01-06T03:00:01,120 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-06T03:00:01,121 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-06T03:00:01,121 combination with a more fine grained `package-data` configuration. 2024-01-06T03:00:01,122 You can read more about "package data files" on setuptools documentation page: 2024-01-06T03:00:01,123 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-06T03:00:01,125 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-06T03:00:01,125 even if it does not contain any `.py` files. 2024-01-06T03:00:01,126 On the other hand, currently there is no concept of package data 2024-01-06T03:00:01,126 directory, all directories are treated like packages. 2024-01-06T03:00:01,127 ******************************************************************************** 2024-01-06T03:00:01,128 !! 2024-01-06T03:00:01,128 check.warn(importable) 2024-01-06T03:00:01,129 /tmp/pip-build-env-5c593_vh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'brainglobe_workflows.brainmapper.analyse' is absent from the `packages` configuration. 2024-01-06T03:00:01,129 !! 2024-01-06T03:00:01,130 ******************************************************************************** 2024-01-06T03:00:01,131 ############################ 2024-01-06T03:00:01,131 # Package would be ignored # 2024-01-06T03:00:01,132 ############################ 2024-01-06T03:00:01,132 Python recognizes 'brainglobe_workflows.brainmapper.analyse' as an importable package[^1], 2024-01-06T03:00:01,133 but it is absent from setuptools' `packages` configuration. 2024-01-06T03:00:01,134 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-06T03:00:01,134 package, please make sure that 'brainglobe_workflows.brainmapper.analyse' is explicitly added 2024-01-06T03:00:01,135 to the `packages` configuration field. 2024-01-06T03:00:01,136 Alternatively, you can also rely on setuptools' discovery methods 2024-01-06T03:00:01,137 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-06T03:00:01,137 instead of `find_packages(...)`/`find:`). 2024-01-06T03:00:01,138 You can read more about "package discovery" on setuptools documentation page: 2024-01-06T03:00:01,139 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-06T03:00:01,140 If you don't want 'brainglobe_workflows.brainmapper.analyse' to be distributed and are 2024-01-06T03:00:01,141 already explicitly excluding 'brainglobe_workflows.brainmapper.analyse' via 2024-01-06T03:00:01,142 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-06T03:00:01,142 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-06T03:00:01,143 combination with a more fine grained `package-data` configuration. 2024-01-06T03:00:01,144 You can read more about "package data files" on setuptools documentation page: 2024-01-06T03:00:01,145 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-06T03:00:01,146 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-06T03:00:01,146 even if it does not contain any `.py` files. 2024-01-06T03:00:01,147 On the other hand, currently there is no concept of package data 2024-01-06T03:00:01,147 directory, all directories are treated like packages. 2024-01-06T03:00:01,148 ******************************************************************************** 2024-01-06T03:00:01,148 !! 2024-01-06T03:00:01,149 check.warn(importable) 2024-01-06T03:00:01,149 /tmp/pip-build-env-5c593_vh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'brainglobe_workflows.brainmapper.export' is absent from the `packages` configuration. 2024-01-06T03:00:01,150 !! 2024-01-06T03:00:01,151 ******************************************************************************** 2024-01-06T03:00:01,151 ############################ 2024-01-06T03:00:01,152 # Package would be ignored # 2024-01-06T03:00:01,152 ############################ 2024-01-06T03:00:01,153 Python recognizes 'brainglobe_workflows.brainmapper.export' as an importable package[^1], 2024-01-06T03:00:01,153 but it is absent from setuptools' `packages` configuration. 2024-01-06T03:00:01,154 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-06T03:00:01,155 package, please make sure that 'brainglobe_workflows.brainmapper.export' is explicitly added 2024-01-06T03:00:01,155 to the `packages` configuration field. 2024-01-06T03:00:01,156 Alternatively, you can also rely on setuptools' discovery methods 2024-01-06T03:00:01,157 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-06T03:00:01,157 instead of `find_packages(...)`/`find:`). 2024-01-06T03:00:01,158 You can read more about "package discovery" on setuptools documentation page: 2024-01-06T03:00:01,160 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-06T03:00:01,161 If you don't want 'brainglobe_workflows.brainmapper.export' to be distributed and are 2024-01-06T03:00:01,161 already explicitly excluding 'brainglobe_workflows.brainmapper.export' via 2024-01-06T03:00:01,162 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-06T03:00:01,162 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-06T03:00:01,163 combination with a more fine grained `package-data` configuration. 2024-01-06T03:00:01,164 You can read more about "package data files" on setuptools documentation page: 2024-01-06T03:00:01,165 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-06T03:00:01,167 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-06T03:00:01,167 even if it does not contain any `.py` files. 2024-01-06T03:00:01,168 On the other hand, currently there is no concept of package data 2024-01-06T03:00:01,168 directory, all directories are treated like packages. 2024-01-06T03:00:01,169 ******************************************************************************** 2024-01-06T03:00:01,170 !! 2024-01-06T03:00:01,170 check.warn(importable) 2024-01-06T03:00:01,171 /tmp/pip-build-env-5c593_vh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'brainglobe_workflows.brainmapper.extract' is absent from the `packages` configuration. 2024-01-06T03:00:01,171 !! 2024-01-06T03:00:01,173 ******************************************************************************** 2024-01-06T03:00:01,173 ############################ 2024-01-06T03:00:01,174 # Package would be ignored # 2024-01-06T03:00:01,174 ############################ 2024-01-06T03:00:01,175 Python recognizes 'brainglobe_workflows.brainmapper.extract' as an importable package[^1], 2024-01-06T03:00:01,175 but it is absent from setuptools' `packages` configuration. 2024-01-06T03:00:01,176 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-06T03:00:01,177 package, please make sure that 'brainglobe_workflows.brainmapper.extract' is explicitly added 2024-01-06T03:00:01,177 to the `packages` configuration field. 2024-01-06T03:00:01,178 Alternatively, you can also rely on setuptools' discovery methods 2024-01-06T03:00:01,178 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-06T03:00:01,179 instead of `find_packages(...)`/`find:`). 2024-01-06T03:00:01,180 You can read more about "package discovery" on setuptools documentation page: 2024-01-06T03:00:01,181 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-06T03:00:01,182 If you don't want 'brainglobe_workflows.brainmapper.extract' to be distributed and are 2024-01-06T03:00:01,182 already explicitly excluding 'brainglobe_workflows.brainmapper.extract' via 2024-01-06T03:00:01,183 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-06T03:00:01,183 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-06T03:00:01,184 combination with a more fine grained `package-data` configuration. 2024-01-06T03:00:01,185 You can read more about "package data files" on setuptools documentation page: 2024-01-06T03:00:01,186 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-06T03:00:01,188 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-06T03:00:01,188 even if it does not contain any `.py` files. 2024-01-06T03:00:01,189 On the other hand, currently there is no concept of package data 2024-01-06T03:00:01,189 directory, all directories are treated like packages. 2024-01-06T03:00:01,190 ******************************************************************************** 2024-01-06T03:00:01,191 !! 2024-01-06T03:00:01,191 check.warn(importable) 2024-01-06T03:00:01,192 /tmp/pip-build-env-5c593_vh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'brainglobe_workflows.brainmapper.figures' is absent from the `packages` configuration. 2024-01-06T03:00:01,192 !! 2024-01-06T03:00:01,193 ******************************************************************************** 2024-01-06T03:00:01,194 ############################ 2024-01-06T03:00:01,194 # Package would be ignored # 2024-01-06T03:00:01,195 ############################ 2024-01-06T03:00:01,195 Python recognizes 'brainglobe_workflows.brainmapper.figures' as an importable package[^1], 2024-01-06T03:00:01,196 but it is absent from setuptools' `packages` configuration. 2024-01-06T03:00:01,197 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-06T03:00:01,197 package, please make sure that 'brainglobe_workflows.brainmapper.figures' is explicitly added 2024-01-06T03:00:01,198 to the `packages` configuration field. 2024-01-06T03:00:01,199 Alternatively, you can also rely on setuptools' discovery methods 2024-01-06T03:00:01,199 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-06T03:00:01,200 instead of `find_packages(...)`/`find:`). 2024-01-06T03:00:01,201 You can read more about "package discovery" on setuptools documentation page: 2024-01-06T03:00:01,202 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-06T03:00:01,202 If you don't want 'brainglobe_workflows.brainmapper.figures' to be distributed and are 2024-01-06T03:00:01,203 already explicitly excluding 'brainglobe_workflows.brainmapper.figures' via 2024-01-06T03:00:01,203 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-06T03:00:01,204 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-06T03:00:01,204 combination with a more fine grained `package-data` configuration. 2024-01-06T03:00:01,205 You can read more about "package data files" on setuptools documentation page: 2024-01-06T03:00:01,206 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-06T03:00:01,207 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-06T03:00:01,208 even if it does not contain any `.py` files. 2024-01-06T03:00:01,208 On the other hand, currently there is no concept of package data 2024-01-06T03:00:01,208 directory, all directories are treated like packages. 2024-01-06T03:00:01,209 ******************************************************************************** 2024-01-06T03:00:01,210 !! 2024-01-06T03:00:01,210 check.warn(importable) 2024-01-06T03:00:01,211 /tmp/pip-build-env-5c593_vh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'brainglobe_workflows.brainmapper.tools' is absent from the `packages` configuration. 2024-01-06T03:00:01,211 !! 2024-01-06T03:00:01,212 ******************************************************************************** 2024-01-06T03:00:01,212 ############################ 2024-01-06T03:00:01,213 # Package would be ignored # 2024-01-06T03:00:01,213 ############################ 2024-01-06T03:00:01,214 Python recognizes 'brainglobe_workflows.brainmapper.tools' as an importable package[^1], 2024-01-06T03:00:01,214 but it is absent from setuptools' `packages` configuration. 2024-01-06T03:00:01,215 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-06T03:00:01,216 package, please make sure that 'brainglobe_workflows.brainmapper.tools' is explicitly added 2024-01-06T03:00:01,216 to the `packages` configuration field. 2024-01-06T03:00:01,217 Alternatively, you can also rely on setuptools' discovery methods 2024-01-06T03:00:01,217 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-06T03:00:01,218 instead of `find_packages(...)`/`find:`). 2024-01-06T03:00:01,219 You can read more about "package discovery" on setuptools documentation page: 2024-01-06T03:00:01,220 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-06T03:00:01,221 If you don't want 'brainglobe_workflows.brainmapper.tools' to be distributed and are 2024-01-06T03:00:01,221 already explicitly excluding 'brainglobe_workflows.brainmapper.tools' via 2024-01-06T03:00:01,222 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-06T03:00:01,222 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-06T03:00:01,223 combination with a more fine grained `package-data` configuration. 2024-01-06T03:00:01,224 You can read more about "package data files" on setuptools documentation page: 2024-01-06T03:00:01,225 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-06T03:00:01,227 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-06T03:00:01,227 even if it does not contain any `.py` files. 2024-01-06T03:00:01,227 On the other hand, currently there is no concept of package data 2024-01-06T03:00:01,228 directory, all directories are treated like packages. 2024-01-06T03:00:01,228 ******************************************************************************** 2024-01-06T03:00:01,229 !! 2024-01-06T03:00:01,230 check.warn(importable) 2024-01-06T03:00:01,230 /tmp/pip-build-env-5c593_vh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'brainglobe_workflows.cellfinder_core' is absent from the `packages` configuration. 2024-01-06T03:00:01,231 !! 2024-01-06T03:00:01,231 ******************************************************************************** 2024-01-06T03:00:01,232 ############################ 2024-01-06T03:00:01,232 # Package would be ignored # 2024-01-06T03:00:01,233 ############################ 2024-01-06T03:00:01,233 Python recognizes 'brainglobe_workflows.cellfinder_core' as an importable package[^1], 2024-01-06T03:00:01,234 but it is absent from setuptools' `packages` configuration. 2024-01-06T03:00:01,235 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-06T03:00:01,235 package, please make sure that 'brainglobe_workflows.cellfinder_core' is explicitly added 2024-01-06T03:00:01,236 to the `packages` configuration field. 2024-01-06T03:00:01,237 Alternatively, you can also rely on setuptools' discovery methods 2024-01-06T03:00:01,238 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-06T03:00:01,238 instead of `find_packages(...)`/`find:`). 2024-01-06T03:00:01,239 You can read more about "package discovery" on setuptools documentation page: 2024-01-06T03:00:01,240 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-06T03:00:01,241 If you don't want 'brainglobe_workflows.cellfinder_core' to be distributed and are 2024-01-06T03:00:01,242 already explicitly excluding 'brainglobe_workflows.cellfinder_core' via 2024-01-06T03:00:01,242 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-06T03:00:01,243 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-06T03:00:01,243 combination with a more fine grained `package-data` configuration. 2024-01-06T03:00:01,244 You can read more about "package data files" on setuptools documentation page: 2024-01-06T03:00:01,246 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-06T03:00:01,247 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-06T03:00:01,248 even if it does not contain any `.py` files. 2024-01-06T03:00:01,248 On the other hand, currently there is no concept of package data 2024-01-06T03:00:01,249 directory, all directories are treated like packages. 2024-01-06T03:00:01,250 ******************************************************************************** 2024-01-06T03:00:01,251 !! 2024-01-06T03:00:01,251 check.warn(importable) 2024-01-06T03:00:01,252 /tmp/pip-build-env-5c593_vh/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'brainglobe_workflows.configs' is absent from the `packages` configuration. 2024-01-06T03:00:01,252 !! 2024-01-06T03:00:01,253 ******************************************************************************** 2024-01-06T03:00:01,254 ############################ 2024-01-06T03:00:01,254 # Package would be ignored # 2024-01-06T03:00:01,255 ############################ 2024-01-06T03:00:01,256 Python recognizes 'brainglobe_workflows.configs' as an importable package[^1], 2024-01-06T03:00:01,256 but it is absent from setuptools' `packages` configuration. 2024-01-06T03:00:01,257 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-06T03:00:01,258 package, please make sure that 'brainglobe_workflows.configs' is explicitly added 2024-01-06T03:00:01,258 to the `packages` configuration field. 2024-01-06T03:00:01,259 Alternatively, you can also rely on setuptools' discovery methods 2024-01-06T03:00:01,259 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-06T03:00:01,260 instead of `find_packages(...)`/`find:`). 2024-01-06T03:00:01,261 You can read more about "package discovery" on setuptools documentation page: 2024-01-06T03:00:01,262 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-06T03:00:01,263 If you don't want 'brainglobe_workflows.configs' to be distributed and are 2024-01-06T03:00:01,263 already explicitly excluding 'brainglobe_workflows.configs' via 2024-01-06T03:00:01,264 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-06T03:00:01,264 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-06T03:00:01,265 combination with a more fine grained `package-data` configuration. 2024-01-06T03:00:01,266 You can read more about "package data files" on setuptools documentation page: 2024-01-06T03:00:01,267 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-06T03:00:01,269 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-06T03:00:01,269 even if it does not contain any `.py` files. 2024-01-06T03:00:01,270 On the other hand, currently there is no concept of package data 2024-01-06T03:00:01,270 directory, all directories are treated like packages. 2024-01-06T03:00:01,271 ******************************************************************************** 2024-01-06T03:00:01,272 !! 2024-01-06T03:00:01,273 check.warn(importable) 2024-01-06T03:00:01,273 creating build/lib/brainglobe_workflows/brainmapper 2024-01-06T03:00:01,274 copying brainglobe_workflows/brainmapper/__init__.py -> build/lib/brainglobe_workflows/brainmapper 2024-01-06T03:00:01,274 copying brainglobe_workflows/brainmapper/main.py -> build/lib/brainglobe_workflows/brainmapper 2024-01-06T03:00:01,275 creating build/lib/brainglobe_workflows/brainmapper/analyse 2024-01-06T03:00:01,275 copying brainglobe_workflows/brainmapper/analyse/__init__.py -> build/lib/brainglobe_workflows/brainmapper/analyse 2024-01-06T03:00:01,276 copying brainglobe_workflows/brainmapper/analyse/analyse.py -> build/lib/brainglobe_workflows/brainmapper/analyse 2024-01-06T03:00:01,276 creating build/lib/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,277 copying brainglobe_workflows/brainmapper/export/__init__.py -> build/lib/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,277 copying brainglobe_workflows/brainmapper/export/abc4d.py -> build/lib/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,278 copying brainglobe_workflows/brainmapper/export/brainrender.py -> build/lib/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,278 copying brainglobe_workflows/brainmapper/export/export.py -> build/lib/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,279 creating build/lib/brainglobe_workflows/brainmapper/extract 2024-01-06T03:00:01,280 copying brainglobe_workflows/brainmapper/extract/__init__.py -> build/lib/brainglobe_workflows/brainmapper/extract 2024-01-06T03:00:01,280 copying brainglobe_workflows/brainmapper/extract/extract_cubes.py -> build/lib/brainglobe_workflows/brainmapper/extract 2024-01-06T03:00:01,281 creating build/lib/brainglobe_workflows/brainmapper/figures 2024-01-06T03:00:01,281 copying brainglobe_workflows/brainmapper/figures/__init__.py -> build/lib/brainglobe_workflows/brainmapper/figures 2024-01-06T03:00:01,282 copying brainglobe_workflows/brainmapper/figures/figures.py -> build/lib/brainglobe_workflows/brainmapper/figures 2024-01-06T03:00:01,282 copying brainglobe_workflows/brainmapper/figures/heatmap.py -> build/lib/brainglobe_workflows/brainmapper/figures 2024-01-06T03:00:01,283 creating build/lib/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,283 copying brainglobe_workflows/brainmapper/tools/__init__.py -> build/lib/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,283 copying brainglobe_workflows/brainmapper/tools/image_processing.py -> build/lib/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,284 copying brainglobe_workflows/brainmapper/tools/parser.py -> build/lib/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,284 copying brainglobe_workflows/brainmapper/tools/prep.py -> build/lib/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,285 copying brainglobe_workflows/brainmapper/tools/system.py -> build/lib/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,286 copying brainglobe_workflows/brainmapper/tools/tools.py -> build/lib/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,286 creating build/lib/brainglobe_workflows/cellfinder_core 2024-01-06T03:00:01,286 copying brainglobe_workflows/cellfinder_core/__init__.py -> build/lib/brainglobe_workflows/cellfinder_core 2024-01-06T03:00:01,287 copying brainglobe_workflows/cellfinder_core/cellfinder.py -> build/lib/brainglobe_workflows/cellfinder_core 2024-01-06T03:00:01,287 creating build/lib/brainglobe_workflows/configs 2024-01-06T03:00:01,288 copying brainglobe_workflows/configs/cellfinder.json -> build/lib/brainglobe_workflows/configs 2024-01-06T03:00:01,288 installing to build/bdist.linux-armv7l/wheel 2024-01-06T03:00:01,289 running install 2024-01-06T03:00:01,289 running install_lib 2024-01-06T03:00:01,290 creating build/bdist.linux-armv7l 2024-01-06T03:00:01,290 creating build/bdist.linux-armv7l/wheel 2024-01-06T03:00:01,291 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows 2024-01-06T03:00:01,291 copying build/lib/brainglobe_workflows/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows 2024-01-06T03:00:01,292 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows/configs 2024-01-06T03:00:01,292 copying build/lib/brainglobe_workflows/configs/cellfinder.json -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/configs 2024-01-06T03:00:01,293 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows/cellfinder_core 2024-01-06T03:00:01,293 copying build/lib/brainglobe_workflows/cellfinder_core/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/cellfinder_core 2024-01-06T03:00:01,294 copying build/lib/brainglobe_workflows/cellfinder_core/cellfinder.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/cellfinder_core 2024-01-06T03:00:01,295 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper 2024-01-06T03:00:01,295 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/figures 2024-01-06T03:00:01,296 copying build/lib/brainglobe_workflows/brainmapper/figures/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/figures 2024-01-06T03:00:01,296 copying build/lib/brainglobe_workflows/brainmapper/figures/figures.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/figures 2024-01-06T03:00:01,297 copying build/lib/brainglobe_workflows/brainmapper/figures/heatmap.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/figures 2024-01-06T03:00:01,297 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/extract 2024-01-06T03:00:01,298 copying build/lib/brainglobe_workflows/brainmapper/extract/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/extract 2024-01-06T03:00:01,298 copying build/lib/brainglobe_workflows/brainmapper/extract/extract_cubes.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/extract 2024-01-06T03:00:01,299 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,299 copying build/lib/brainglobe_workflows/brainmapper/tools/system.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,300 copying build/lib/brainglobe_workflows/brainmapper/tools/parser.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,300 copying build/lib/brainglobe_workflows/brainmapper/tools/tools.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,301 copying build/lib/brainglobe_workflows/brainmapper/tools/prep.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,301 copying build/lib/brainglobe_workflows/brainmapper/tools/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,302 copying build/lib/brainglobe_workflows/brainmapper/tools/image_processing.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/tools 2024-01-06T03:00:01,302 copying build/lib/brainglobe_workflows/brainmapper/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper 2024-01-06T03:00:01,303 copying build/lib/brainglobe_workflows/brainmapper/main.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper 2024-01-06T03:00:01,303 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,304 copying build/lib/brainglobe_workflows/brainmapper/export/brainrender.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,304 copying build/lib/brainglobe_workflows/brainmapper/export/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,305 copying build/lib/brainglobe_workflows/brainmapper/export/abc4d.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,305 copying build/lib/brainglobe_workflows/brainmapper/export/export.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/export 2024-01-06T03:00:01,306 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/analyse 2024-01-06T03:00:01,306 copying build/lib/brainglobe_workflows/brainmapper/analyse/analyse.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/analyse 2024-01-06T03:00:01,307 copying build/lib/brainglobe_workflows/brainmapper/analyse/__init__.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows/brainmapper/analyse 2024-01-06T03:00:01,307 copying build/lib/brainglobe_workflows/utils.py -> build/bdist.linux-armv7l/wheel/brainglobe_workflows 2024-01-06T03:00:01,308 running install_egg_info 2024-01-06T03:00:01,309 Copying brainglobe_workflows.egg-info to build/bdist.linux-armv7l/wheel/brainglobe_workflows-1.1.0-py3.11.egg-info 2024-01-06T03:00:01,320 running install_scripts 2024-01-06T03:00:01,342 creating build/bdist.linux-armv7l/wheel/brainglobe_workflows-1.1.0.dist-info/WHEEL 2024-01-06T03:00:01,345 creating '/tmp/pip-wheel-xndeuvdw/.tmp-2n3ca15n/brainglobe_workflows-1.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-06T03:00:01,348 adding 'brainglobe_workflows/__init__.py' 2024-01-06T03:00:01,349 adding 'brainglobe_workflows/utils.py' 2024-01-06T03:00:01,351 adding 'brainglobe_workflows/brainmapper/__init__.py' 2024-01-06T03:00:01,353 adding 'brainglobe_workflows/brainmapper/main.py' 2024-01-06T03:00:01,355 adding 'brainglobe_workflows/brainmapper/analyse/__init__.py' 2024-01-06T03:00:01,357 adding 'brainglobe_workflows/brainmapper/analyse/analyse.py' 2024-01-06T03:00:01,358 adding 'brainglobe_workflows/brainmapper/export/__init__.py' 2024-01-06T03:00:01,360 adding 'brainglobe_workflows/brainmapper/export/abc4d.py' 2024-01-06T03:00:01,361 adding 'brainglobe_workflows/brainmapper/export/brainrender.py' 2024-01-06T03:00:01,362 adding 'brainglobe_workflows/brainmapper/export/export.py' 2024-01-06T03:00:01,363 adding 'brainglobe_workflows/brainmapper/extract/__init__.py' 2024-01-06T03:00:01,366 adding 'brainglobe_workflows/brainmapper/extract/extract_cubes.py' 2024-01-06T03:00:01,367 adding 'brainglobe_workflows/brainmapper/figures/__init__.py' 2024-01-06T03:00:01,368 adding 'brainglobe_workflows/brainmapper/figures/figures.py' 2024-01-06T03:00:01,370 adding 'brainglobe_workflows/brainmapper/figures/heatmap.py' 2024-01-06T03:00:01,371 adding 'brainglobe_workflows/brainmapper/tools/__init__.py' 2024-01-06T03:00:01,372 adding 'brainglobe_workflows/brainmapper/tools/image_processing.py' 2024-01-06T03:00:01,375 adding 'brainglobe_workflows/brainmapper/tools/parser.py' 2024-01-06T03:00:01,377 adding 'brainglobe_workflows/brainmapper/tools/prep.py' 2024-01-06T03:00:01,378 adding 'brainglobe_workflows/brainmapper/tools/system.py' 2024-01-06T03:00:01,379 adding 'brainglobe_workflows/brainmapper/tools/tools.py' 2024-01-06T03:00:01,381 adding 'brainglobe_workflows/cellfinder_core/__init__.py' 2024-01-06T03:00:01,383 adding 'brainglobe_workflows/cellfinder_core/cellfinder.py' 2024-01-06T03:00:01,384 adding 'brainglobe_workflows/configs/cellfinder.json' 2024-01-06T03:00:01,387 adding 'brainglobe_workflows-1.1.0.dist-info/LICENSE' 2024-01-06T03:00:01,388 adding 'brainglobe_workflows-1.1.0.dist-info/METADATA' 2024-01-06T03:00:01,389 adding 'brainglobe_workflows-1.1.0.dist-info/WHEEL' 2024-01-06T03:00:01,390 adding 'brainglobe_workflows-1.1.0.dist-info/entry_points.txt' 2024-01-06T03:00:01,391 adding 'brainglobe_workflows-1.1.0.dist-info/top_level.txt' 2024-01-06T03:00:01,392 adding 'brainglobe_workflows-1.1.0.dist-info/RECORD' 2024-01-06T03:00:01,394 removing build/bdist.linux-armv7l/wheel 2024-01-06T03:00:01,531 Building wheel for brainglobe-workflows (pyproject.toml): finished with status 'done' 2024-01-06T03:00:01,536 Created wheel for brainglobe-workflows: filename=brainglobe_workflows-1.1.0-py3-none-any.whl size=36508 sha256=a51e28508b22a8a3a84fbad104aff0ccf7ec652c7c6a612c7d55b80c3d5d5b31 2024-01-06T03:00:01,537 Stored in directory: /tmp/pip-ephem-wheel-cache-z11b7__g/wheels/61/8b/0a/7e9422a76919c91e27ed5a7bbde31d73cc7f5829d2a4f5c9da 2024-01-06T03:00:01,553 Successfully built brainglobe-workflows 2024-01-06T03:00:01,558 Removed build tracker: '/tmp/pip-build-tracker-r6_tj6kz'