2024-01-09T00:29:21,497 Created temporary directory: /tmp/pip-build-tracker-52srsjap 2024-01-09T00:29:21,498 Initialized build tracking at /tmp/pip-build-tracker-52srsjap 2024-01-09T00:29:21,498 Created build tracker: /tmp/pip-build-tracker-52srsjap 2024-01-09T00:29:21,498 Entered build tracker: /tmp/pip-build-tracker-52srsjap 2024-01-09T00:29:21,499 Created temporary directory: /tmp/pip-wheel-4qmt4bpz 2024-01-09T00:29:21,503 Created temporary directory: /tmp/pip-ephem-wheel-cache-onk97mbe 2024-01-09T00:29:21,527 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-09T00:29:21,530 2 location(s) to search for versions of biosimulator-processes: 2024-01-09T00:29:21,530 * https://pypi.org/simple/biosimulator-processes/ 2024-01-09T00:29:21,530 * https://www.piwheels.org/simple/biosimulator-processes/ 2024-01-09T00:29:21,531 Fetching project page and analyzing links: https://pypi.org/simple/biosimulator-processes/ 2024-01-09T00:29:21,532 Getting page https://pypi.org/simple/biosimulator-processes/ 2024-01-09T00:29:21,533 Found index url https://pypi.org/simple/ 2024-01-09T00:29:21,584 Fetched page https://pypi.org/simple/biosimulator-processes/ as application/vnd.pypi.simple.v1+json 2024-01-09T00:29:21,587 Found link https://files.pythonhosted.org/packages/b4/4f/5a59a302daff05f21b3dc47a6e4d461740ff0c8ed66d277ccabb563756a0/biosimulator-processes-0.0.3.tar.gz (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6), version: 0.0.3 2024-01-09T00:29:21,588 Skipping link: No binaries permitted for biosimulator-processes: https://files.pythonhosted.org/packages/1f/04/217eb69d95f5b52a958b0191acd9bb37dfba0323c890cfb6adb69c4c7f27/biosimulator_processes-0.0.3-py3-none-any.whl (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6) 2024-01-09T00:29:21,588 Found link https://files.pythonhosted.org/packages/95/4f/d433238080042a660a4f8388bf875587ccedcdb132401b8d45f633ca2484/biosimulator-processes-0.0.6.tar.gz (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6), version: 0.0.6 2024-01-09T00:29:21,588 Skipping link: No binaries permitted for biosimulator-processes: https://files.pythonhosted.org/packages/fc/64/de47a318af55786f980eae0db451f4cdb384c0ee1e4265d0a04ae6568a1e/biosimulator_processes-0.0.6-py3-none-any.whl (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6) 2024-01-09T00:29:21,589 Found link https://files.pythonhosted.org/packages/dd/81/21a021d29483561b6789287583e4038e3f1ddb9cf9d171cb0989eb918bba/biosimulator-processes-0.0.7.tar.gz (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6), version: 0.0.7 2024-01-09T00:29:21,589 Skipping link: No binaries permitted for biosimulator-processes: https://files.pythonhosted.org/packages/b4/78/32e777c3a79ac61fa23da24c869b09779122cf92e0a550a504b98cc94bcb/biosimulator_processes-0.0.7-py3-none-any.whl (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6) 2024-01-09T00:29:21,590 Found link https://files.pythonhosted.org/packages/7d/51/1b73552fade705186ccd81446180148070dc1a2faacb60c3b6ff368aac74/biosimulator-processes-0.0.8.tar.gz (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6), version: 0.0.8 2024-01-09T00:29:21,590 Skipping link: No binaries permitted for biosimulator-processes: https://files.pythonhosted.org/packages/58/de/e854ab559a8945305501e542b9e488e025fb33b2867d3dfaec33743ac4be/biosimulator_processes-0.0.8-py3-none-any.whl (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6) 2024-01-09T00:29:21,591 Found link https://files.pythonhosted.org/packages/20/bd/b4740713cca94bc52ac50d53ce3cdc2881f202d3d02b517851617ad668f7/biosimulator-processes-0.0.9.tar.gz (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6), version: 0.0.9 2024-01-09T00:29:21,591 Skipping link: No binaries permitted for biosimulator-processes: https://files.pythonhosted.org/packages/9e/c0/6416f8195e0ea9b30e2eff7b62cbc2f8c053ec766343f6ec7296ea3687e3/biosimulator_processes-0.0.9-py3-none-any.whl (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6) 2024-01-09T00:29:21,591 Found link https://files.pythonhosted.org/packages/f1/8d/dd515c88bc205edc62e66c1408343ed314cb0aca8e44dedc09d0fd982ce7/biosimulator-processes-0.0.10.tar.gz (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6), version: 0.0.10 2024-01-09T00:29:21,592 Skipping link: No binaries permitted for biosimulator-processes: https://files.pythonhosted.org/packages/76/c5/4c3b7e568b5105b06fdf8c4c624e7f1971a396d0818e7da5323cd695655d/biosimulator_processes-0.0.10-py3-none-any.whl (from https://pypi.org/simple/biosimulator-processes/) (requires-python:>=3.6) 2024-01-09T00:29:21,592 Fetching project page and analyzing links: https://www.piwheels.org/simple/biosimulator-processes/ 2024-01-09T00:29:21,592 Getting page https://www.piwheels.org/simple/biosimulator-processes/ 2024-01-09T00:29:21,593 Found index url https://www.piwheels.org/simple/ 2024-01-09T00:29:21,658 Fetched page https://www.piwheels.org/simple/biosimulator-processes/ as text/html 2024-01-09T00:29:21,660 Skipping link: No binaries permitted for biosimulator-processes: https://www.piwheels.org/simple/biosimulator-processes/biosimulator_processes-0.0.3-py3-none-any.whl#sha256=a4c6dba8d145016b101ab3cd1655bfeb173029b086767c8fe452a6a83ea4a71c (from https://www.piwheels.org/simple/biosimulator-processes/) (requires-python:>=3.6) 2024-01-09T00:29:21,660 Skipping link: not a file: https://www.piwheels.org/simple/biosimulator-processes/ 2024-01-09T00:29:21,660 Skipping link: not a file: https://pypi.org/simple/biosimulator-processes/ 2024-01-09T00:29:21,678 Given no hashes to check 1 links for project 'biosimulator-processes': discarding no candidates 2024-01-09T00:29:21,695 Collecting biosimulator-processes==0.0.7 2024-01-09T00:29:21,697 Created temporary directory: /tmp/pip-unpack-c313fbz0 2024-01-09T00:29:21,739 Downloading biosimulator-processes-0.0.7.tar.gz (16 kB) 2024-01-09T00:29:21,791 Added biosimulator-processes==0.0.7 from https://files.pythonhosted.org/packages/dd/81/21a021d29483561b6789287583e4038e3f1ddb9cf9d171cb0989eb918bba/biosimulator-processes-0.0.7.tar.gz to build tracker '/tmp/pip-build-tracker-52srsjap' 2024-01-09T00:29:21,793 Running setup.py (path:/tmp/pip-wheel-4qmt4bpz/biosimulator-processes_52e387a454de4577b067b98f60e70e2c/setup.py) egg_info for package biosimulator-processes 2024-01-09T00:29:21,793 Created temporary directory: /tmp/pip-pip-egg-info-q3tteob0 2024-01-09T00:29:21,794 Preparing metadata (setup.py): started 2024-01-09T00:29:21,795 Running command python setup.py egg_info 2024-01-09T00:29:22,242 Traceback (most recent call last): 2024-01-09T00:29:22,243 File "", line 2, in 2024-01-09T00:29:22,243 File "", line 34, in 2024-01-09T00:29:22,243 File "/tmp/pip-wheel-4qmt4bpz/biosimulator-processes_52e387a454de4577b067b98f60e70e2c/setup.py", line 3, in 2024-01-09T00:29:22,243 from biosimulator_processes._VERSION import __version__ 2024-01-09T00:29:22,243 File "/tmp/pip-wheel-4qmt4bpz/biosimulator-processes_52e387a454de4577b067b98f60e70e2c/biosimulator_processes/__init__.py", line 1, in 2024-01-09T00:29:22,244 from process_bigraph import process_registry 2024-01-09T00:29:22,244 ModuleNotFoundError: No module named 'process_bigraph' 2024-01-09T00:29:22,288 ERROR: python setup.py egg_info exited with 1 2024-01-09T00:29:22,305 [bold magenta]full command[/]: [blue]/usr/bin/python3 -c ' 2024-01-09T00:29:22,305 exec(compile('"'"''"'"''"'"' 2024-01-09T00:29:22,305 # This is -- a caller that pip uses to run setup.py 2024-01-09T00:29:22,305 # 2024-01-09T00:29:22,305 # - It imports setuptools before invoking setup.py, to enable projects that directly 2024-01-09T00:29:22,305 # import from `distutils.core` to work with newer packaging standards. 2024-01-09T00:29:22,305 # - It provides a clear error message when setuptools is not installed. 2024-01-09T00:29:22,305 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2024-01-09T00:29:22,305 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2024-01-09T00:29:22,305 # manifest_maker: standard file '"'"'-c'"'"' not found". 2024-01-09T00:29:22,305 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2024-01-09T00:29:22,305 import os, sys, tokenize 2024-01-09T00:29:22,305 2024-01-09T00:29:22,305 try: 2024-01-09T00:29:22,305 import setuptools 2024-01-09T00:29:22,305 except ImportError as error: 2024-01-09T00:29:22,305 print( 2024-01-09T00:29:22,305 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2024-01-09T00:29:22,305 "the build environment.", 2024-01-09T00:29:22,305 file=sys.stderr, 2024-01-09T00:29:22,305 ) 2024-01-09T00:29:22,305 sys.exit(1) 2024-01-09T00:29:22,305 2024-01-09T00:29:22,305 __file__ = %r 2024-01-09T00:29:22,305 sys.argv[0] = __file__ 2024-01-09T00:29:22,305 2024-01-09T00:29:22,305 if os.path.exists(__file__): 2024-01-09T00:29:22,305 filename = __file__ 2024-01-09T00:29:22,305 with tokenize.open(__file__) as f: 2024-01-09T00:29:22,305 setup_py_code = f.read() 2024-01-09T00:29:22,305 else: 2024-01-09T00:29:22,305 filename = "" 2024-01-09T00:29:22,305 setup_py_code = "from setuptools import setup; setup()" 2024-01-09T00:29:22,305 2024-01-09T00:29:22,305 exec(compile(setup_py_code, filename, "exec")) 2024-01-09T00:29:22,305 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-4qmt4bpz/biosimulator-processes_52e387a454de4577b067b98f60e70e2c/setup.py'"'"',), "", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-q3tteob0[/] 2024-01-09T00:29:22,305 [bold magenta]cwd[/]: /tmp/pip-wheel-4qmt4bpz/biosimulator-processes_52e387a454de4577b067b98f60e70e2c/ 2024-01-09T00:29:22,306 Preparing metadata (setup.py): finished with status 'error' 2024-01-09T00:29:22,307 ERROR: metadata generation failed 2024-01-09T00:29:22,313 Exception information: 2024-01-09T00:29:22,313 Traceback (most recent call last): 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata 2024-01-09T00:29:22,313 call_subprocess( 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2024-01-09T00:29:22,313 raise error 2024-01-09T00:29:22,313 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1 2024-01-09T00:29:22,313 2024-01-09T00:29:22,313 The above exception was the direct cause of the following exception: 2024-01-09T00:29:22,313 2024-01-09T00:29:22,313 Traceback (most recent call last): 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2024-01-09T00:29:22,313 status = run_func(*args) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 245, in wrapper 2024-01-09T00:29:22,313 return func(self, options, args) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 147, in run 2024-01-09T00:29:22,313 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 95, in resolve 2024-01-09T00:29:22,313 result = self._result = resolver.resolve( 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve 2024-01-09T00:29:22,313 state = resolution.resolve(requirements, max_rounds=max_rounds) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve 2024-01-09T00:29:22,313 self._add_to_criteria(self.state.criteria, r, parent=None) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria 2024-01-09T00:29:22,313 if not criterion.candidates: 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__ 2024-01-09T00:29:22,313 return bool(self._sequence) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2024-01-09T00:29:22,313 return any(self) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2024-01-09T00:29:22,313 return (c for c in iterator if id(c) not in self._incompatible_ids) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2024-01-09T00:29:22,313 candidate = func() 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 211, in _make_candidate_from_link 2024-01-09T00:29:22,313 self._link_candidate_cache[link] = LinkCandidate( 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__ 2024-01-09T00:29:22,313 super().__init__( 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__ 2024-01-09T00:29:22,313 self.dist = self._prepare() 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare 2024-01-09T00:29:22,313 dist = self._prepare_distribution() 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution 2024-01-09T00:29:22,313 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 525, in prepare_linked_requirement 2024-01-09T00:29:22,313 return self._prepare_linked_requirement(req, parallel_builds) 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 640, in _prepare_linked_requirement 2024-01-09T00:29:22,313 dist = _get_prepared_distribution( 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution 2024-01-09T00:29:22,313 abstract_dist.prepare_distribution_metadata( 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/distributions/sdist.py", line 67, in prepare_distribution_metadata 2024-01-09T00:29:22,313 self.req.prepare_metadata() 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/req/req_install.py", line 583, in prepare_metadata 2024-01-09T00:29:22,313 self.metadata_directory = generate_metadata_legacy( 2024-01-09T00:29:22,313 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata 2024-01-09T00:29:22,313 raise MetadataGenerationFailed(package_details=details) from error 2024-01-09T00:29:22,313 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed 2024-01-09T00:29:22,322 Removed biosimulator-processes==0.0.7 from https://files.pythonhosted.org/packages/dd/81/21a021d29483561b6789287583e4038e3f1ddb9cf9d171cb0989eb918bba/biosimulator-processes-0.0.7.tar.gz from build tracker '/tmp/pip-build-tracker-52srsjap' 2024-01-09T00:29:22,323 Removed build tracker: '/tmp/pip-build-tracker-52srsjap'