2024-01-10T13:03:55,324 Created temporary directory: /tmp/pip-build-tracker-y9ddfhv2 2024-01-10T13:03:55,325 Initialized build tracking at /tmp/pip-build-tracker-y9ddfhv2 2024-01-10T13:03:55,326 Created build tracker: /tmp/pip-build-tracker-y9ddfhv2 2024-01-10T13:03:55,326 Entered build tracker: /tmp/pip-build-tracker-y9ddfhv2 2024-01-10T13:03:55,327 Created temporary directory: /tmp/pip-wheel-1tlbzv4j 2024-01-10T13:03:55,330 Created temporary directory: /tmp/pip-ephem-wheel-cache-w22mr35s 2024-01-10T13:03:55,352 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-10T13:03:55,355 2 location(s) to search for versions of pylammpstrj: 2024-01-10T13:03:55,355 * https://pypi.org/simple/pylammpstrj/ 2024-01-10T13:03:55,355 * https://www.piwheels.org/simple/pylammpstrj/ 2024-01-10T13:03:55,356 Fetching project page and analyzing links: https://pypi.org/simple/pylammpstrj/ 2024-01-10T13:03:55,357 Getting page https://pypi.org/simple/pylammpstrj/ 2024-01-10T13:03:55,358 Found index url https://pypi.org/simple/ 2024-01-10T13:03:55,568 Fetched page https://pypi.org/simple/pylammpstrj/ as application/vnd.pypi.simple.v1+json 2024-01-10T13:03:55,571 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/a3/57/a114ab4ae001790823689ce9b49c13a914f60f7875e67d7f2d7c5f72e465/pylammpstrj-1.0.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,572 Found link https://files.pythonhosted.org/packages/22/bb/a0b7cb4ae082fd59081908f259c06d6dc0aa40cd3a00191a1c1ea44422b2/pylammpstrj-1.0.0.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.0 2024-01-10T13:03:55,573 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/cd/03/798cd6908b3f5469192ae69adf8e21869cf77b10c2d4c976dc2048500ef9/pylammpstrj-1.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,573 Found link https://files.pythonhosted.org/packages/23/5d/89b7b602b9385193b2a45002a796b7fa4165175b83ff3924414dd0221062/pylammpstrj-1.0.1.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.1 2024-01-10T13:03:55,574 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/42/e5/88e1467005648fdba2f86178a4cf8587d7f8d1d49c21e435367929a8a8bc/pylammpstrj-1.0.2a0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,575 Found link https://files.pythonhosted.org/packages/0d/66/cdb370eb9514850d814b9d4aa9dd131c5c6c6badd84e92a4ffc395d6602d/pylammpstrj-1.0.2a0.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.2a0 2024-01-10T13:03:55,576 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/e2/88/54f41e14bbc98ef3fd7d4e635ce27a7dfc6dcc489d8f91e0f8c91e9a8edd/pylammpstrj-1.0.2rc0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,577 Found link https://files.pythonhosted.org/packages/cb/a6/57f8e9f684840dd85f65f3b6595740eb31a8fc6d62d6e599083ff789cd77/pylammpstrj-1.0.2rc0.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.2rc0 2024-01-10T13:03:55,577 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/53/f0/1e7f5d9b4840a63142c13b35bbba27b9aaa312dd0f12f6437fd1e6d1ef04/pylammpstrj-1.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,578 Found link https://files.pythonhosted.org/packages/3a/fb/a71ddf18e67e9ed88b62f3991a654453e1c0bcb643cff7043771bd8195f3/pylammpstrj-1.0.2.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.2 2024-01-10T13:03:55,579 Fetching project page and analyzing links: https://www.piwheels.org/simple/pylammpstrj/ 2024-01-10T13:03:55,580 Getting page https://www.piwheels.org/simple/pylammpstrj/ 2024-01-10T13:03:55,581 Found index url https://www.piwheels.org/simple/ 2024-01-10T13:03:55,740 Fetched page https://www.piwheels.org/simple/pylammpstrj/ as text/html 2024-01-10T13:03:55,745 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2-cp311-cp311-linux_armv6l.whl#sha256=153d52803acd4f0bfeb9a6477c18077b00cd7b4b9c0577fbf7d1cecc14f67bf2 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,745 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2-cp311-cp311-linux_armv7l.whl#sha256=153d52803acd4f0bfeb9a6477c18077b00cd7b4b9c0577fbf7d1cecc14f67bf2 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,746 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2-cp39-cp39-linux_armv6l.whl#sha256=2b042da0da38e28350f4b2443f1f46f393d216727bb81adb38e57ef3c29f930b (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,746 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2-cp39-cp39-linux_armv7l.whl#sha256=2b042da0da38e28350f4b2443f1f46f393d216727bb81adb38e57ef3c29f930b (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,747 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2a0-cp311-cp311-linux_armv6l.whl#sha256=cc39977a370b32ed681a142f5837e63d34c3afa668c609b8ac198995e538a26b (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,747 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2a0-cp311-cp311-linux_armv7l.whl#sha256=cc39977a370b32ed681a142f5837e63d34c3afa668c609b8ac198995e538a26b (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,748 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2a0-cp39-cp39-linux_armv6l.whl#sha256=125afb6b45786da26a14e4cf5acaf576cc0ff49b85e572c8bb2b2559a96cc490 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,748 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2a0-cp39-cp39-linux_armv7l.whl#sha256=125afb6b45786da26a14e4cf5acaf576cc0ff49b85e572c8bb2b2559a96cc490 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,749 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=91dfc7c58f20dfaad14faa1fc5bc20ecda185e65f40f84c56b35eb8fb6d759d1 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,750 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=91dfc7c58f20dfaad14faa1fc5bc20ecda185e65f40f84c56b35eb8fb6d759d1 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,750 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=99797b027aeafbb87c0454d320f0f3b100d9014e13187ac54b533b6e3e7297d6 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,751 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=99797b027aeafbb87c0454d320f0f3b100d9014e13187ac54b533b6e3e7297d6 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T13:03:55,751 Skipping link: not a file: https://www.piwheels.org/simple/pylammpstrj/ 2024-01-10T13:03:55,752 Skipping link: not a file: https://pypi.org/simple/pylammpstrj/ 2024-01-10T13:03:55,771 Given no hashes to check 1 links for project 'pylammpstrj': discarding no candidates 2024-01-10T13:03:55,789 Collecting pylammpstrj==1.0.2rc0 2024-01-10T13:03:55,791 Created temporary directory: /tmp/pip-unpack-9r9puw4y 2024-01-10T13:03:55,999 Downloading pylammpstrj-1.0.2rc0.tar.gz (51 kB) 2024-01-10T13:03:56,089 Added pylammpstrj==1.0.2rc0 from https://files.pythonhosted.org/packages/cb/a6/57f8e9f684840dd85f65f3b6595740eb31a8fc6d62d6e599083ff789cd77/pylammpstrj-1.0.2rc0.tar.gz to build tracker '/tmp/pip-build-tracker-y9ddfhv2' 2024-01-10T13:03:56,092 Created temporary directory: /tmp/pip-build-env-jvggmjwr 2024-01-10T13:03:56,097 Installing build dependencies: started 2024-01-10T13:03:56,098 Running command pip subprocess to install build dependencies 2024-01-10T13:03:57,277 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-01-10T13:03:57,803 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-10T13:03:59,208 Collecting setuptools 2024-01-10T13:03:59,223 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl (819 kB) 2024-01-10T13:04:01,816 Installing collected packages: setuptools 2024-01-10T13:04:04,050 Successfully installed setuptools-69.0.3 2024-01-10T13:04:04,412 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-10T13:04:04,412 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-10T13:04:04,673 Installing build dependencies: finished with status 'done' 2024-01-10T13:04:04,676 Getting requirements to build wheel: started 2024-01-10T13:04:04,677 Running command Getting requirements to build wheel 2024-01-10T13:04:05,425 running egg_info 2024-01-10T13:04:05,429 writing pylammpstrj.egg-info/PKG-INFO 2024-01-10T13:04:05,433 writing dependency_links to pylammpstrj.egg-info/dependency_links.txt 2024-01-10T13:04:05,436 writing top-level names to pylammpstrj.egg-info/top_level.txt 2024-01-10T13:04:05,454 reading manifest file 'pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T13:04:05,456 reading manifest template 'MANIFEST.in' 2024-01-10T13:04:05,459 adding license file 'LICENSE' 2024-01-10T13:04:05,461 writing manifest file 'pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T13:04:05,572 Getting requirements to build wheel: finished with status 'done' 2024-01-10T13:04:05,580 Installing backend dependencies: started 2024-01-10T13:04:05,581 Running command pip subprocess to install backend dependencies 2024-01-10T13:04:06,722 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-01-10T13:04:07,238 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-10T13:04:07,716 Collecting wheel 2024-01-10T13:04:07,729 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-01-10T13:04:09,965 Installing collected packages: wheel 2024-01-10T13:04:10,212 Creating /tmp/pip-build-env-jvggmjwr/normal/local/bin 2024-01-10T13:04:10,215 changing mode of /tmp/pip-build-env-jvggmjwr/normal/local/bin/wheel to 755 2024-01-10T13:04:10,226 Successfully installed wheel-0.42.0 2024-01-10T13:04:10,550 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-10T13:04:10,551 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-10T13:04:10,781 Installing backend dependencies: finished with status 'done' 2024-01-10T13:04:10,783 Created temporary directory: /tmp/pip-modern-metadata-2_m_9sz3 2024-01-10T13:04:10,785 Preparing metadata (pyproject.toml): started 2024-01-10T13:04:10,786 Running command Preparing metadata (pyproject.toml) 2024-01-10T13:04:11,591 running dist_info 2024-01-10T13:04:11,595 creating /tmp/pip-modern-metadata-2_m_9sz3/pylammpstrj.egg-info 2024-01-10T13:04:11,599 writing /tmp/pip-modern-metadata-2_m_9sz3/pylammpstrj.egg-info/PKG-INFO 2024-01-10T13:04:11,603 writing dependency_links to /tmp/pip-modern-metadata-2_m_9sz3/pylammpstrj.egg-info/dependency_links.txt 2024-01-10T13:04:11,605 writing top-level names to /tmp/pip-modern-metadata-2_m_9sz3/pylammpstrj.egg-info/top_level.txt 2024-01-10T13:04:11,607 writing manifest file '/tmp/pip-modern-metadata-2_m_9sz3/pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T13:04:11,625 reading manifest file '/tmp/pip-modern-metadata-2_m_9sz3/pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T13:04:11,627 reading manifest template 'MANIFEST.in' 2024-01-10T13:04:11,630 adding license file 'LICENSE' 2024-01-10T13:04:11,632 writing manifest file '/tmp/pip-modern-metadata-2_m_9sz3/pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T13:04:11,632 creating '/tmp/pip-modern-metadata-2_m_9sz3/pylammpstrj-1.0.2rc0.dist-info' 2024-01-10T13:04:11,779 Preparing metadata (pyproject.toml): finished with status 'done' 2024-01-10T13:04:11,791 Source in /tmp/pip-wheel-1tlbzv4j/pylammpstrj_8dfff84cefd94437a098d09c7ca0158a has version 1.0.2rc0, which satisfies requirement pylammpstrj==1.0.2rc0 from https://files.pythonhosted.org/packages/cb/a6/57f8e9f684840dd85f65f3b6595740eb31a8fc6d62d6e599083ff789cd77/pylammpstrj-1.0.2rc0.tar.gz 2024-01-10T13:04:11,792 Removed pylammpstrj==1.0.2rc0 from https://files.pythonhosted.org/packages/cb/a6/57f8e9f684840dd85f65f3b6595740eb31a8fc6d62d6e599083ff789cd77/pylammpstrj-1.0.2rc0.tar.gz from build tracker '/tmp/pip-build-tracker-y9ddfhv2' 2024-01-10T13:04:11,811 Created temporary directory: /tmp/pip-unpack-f3y0a8fw 2024-01-10T13:04:11,812 Created temporary directory: /tmp/pip-unpack-2j4rptmq 2024-01-10T13:04:11,828 Building wheels for collected packages: pylammpstrj 2024-01-10T13:04:11,832 Created temporary directory: /tmp/pip-wheel-2dw_7cte 2024-01-10T13:04:11,833 Destination directory: /tmp/pip-wheel-2dw_7cte 2024-01-10T13:04:11,835 Building wheel for pylammpstrj (pyproject.toml): started 2024-01-10T13:04:11,836 Running command Building wheel for pylammpstrj (pyproject.toml) 2024-01-10T13:04:12,625 running bdist_wheel 2024-01-10T13:04:12,641 running build 2024-01-10T13:04:12,641 running build_py 2024-01-10T13:04:12,646 running egg_info 2024-01-10T13:04:12,650 writing pylammpstrj.egg-info/PKG-INFO 2024-01-10T13:04:12,654 writing dependency_links to pylammpstrj.egg-info/dependency_links.txt 2024-01-10T13:04:12,656 writing top-level names to pylammpstrj.egg-info/top_level.txt 2024-01-10T13:04:12,664 reading manifest file 'pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T13:04:12,666 reading manifest template 'MANIFEST.in' 2024-01-10T13:04:12,669 adding license file 'LICENSE' 2024-01-10T13:04:12,671 writing manifest file 'pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T13:04:12,675 creating build 2024-01-10T13:04:12,676 creating build/lib.linux-armv7l-cpython-311 2024-01-10T13:04:12,677 creating build/lib.linux-armv7l-cpython-311/pylammpstrj 2024-01-10T13:04:12,678 copying pylammpstrj/pylammpstrjmodule.c -> build/lib.linux-armv7l-cpython-311/pylammpstrj 2024-01-10T13:04:12,681 creating build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj 2024-01-10T13:04:12,682 copying pylammpstrj/lammpstrj/atom.c -> build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj 2024-01-10T13:04:12,685 copying pylammpstrj/lammpstrj/average.c -> build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj 2024-01-10T13:04:12,687 copying pylammpstrj/lammpstrj/box.c -> build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj 2024-01-10T13:04:12,689 copying pylammpstrj/lammpstrj/read.c -> build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj 2024-01-10T13:04:12,692 copying pylammpstrj/lammpstrj/select.c -> build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj 2024-01-10T13:04:12,695 copying pylammpstrj/lammpstrj/skip.c -> build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj 2024-01-10T13:04:12,698 copying pylammpstrj/lammpstrj/trajectory.c -> build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj 2024-01-10T13:04:12,700 creating build/lib.linux-armv7l-cpython-311/pylammpstrj/include 2024-01-10T13:04:12,701 copying pylammpstrj/include/pylammpstrjmodule.h -> build/lib.linux-armv7l-cpython-311/pylammpstrj/include 2024-01-10T13:04:12,703 copying pylammpstrj/include/utils.h -> build/lib.linux-armv7l-cpython-311/pylammpstrj/include 2024-01-10T13:04:12,706 running build_ext 2024-01-10T13:04:12,712 building 'pylammpstrj' extension 2024-01-10T13:04:12,712 creating build/temp.linux-armv7l-cpython-311 2024-01-10T13:04:12,713 creating build/temp.linux-armv7l-cpython-311/pylammpstrj 2024-01-10T13:04:12,714 creating build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj 2024-01-10T13:04:12,715 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.11 -I/usr/include/python3.11 -c pylammpstrj/lammpstrj/atom.c -o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/atom.o -g -O3 -Wall -Wextra 2024-01-10T13:04:13,096 pylammpstrj/lammpstrj/atom.c: In function ‘atom_builder_new’: 2024-01-10T13:04:13,096 pylammpstrj/lammpstrj/atom.c:222:5: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 2024-01-10T13:04:13,097 222 | strncpy(ab.dump_format, dump_format, READ_BUFFER_LIMIT); 2024-01-10T13:04:13,097 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-10T13:04:13,143 pylammpstrj/lammpstrj/atom.c: In function ‘read_atom_entry’: 2024-01-10T13:04:13,143 pylammpstrj/lammpstrj/atom.c:304:21: warning: ‘strncpy’ output may be truncated copying 3 bytes from a string of length 9 [-Wstringop-truncation] 2024-01-10T13:04:13,144 304 | strncpy(atom.label, res.s, LABEL_LIMIT); 2024-01-10T13:04:13,144 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-10T13:04:13,270 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.11 -I/usr/include/python3.11 -c pylammpstrj/lammpstrj/average.c -o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/average.o -g -O3 -Wall -Wextra 2024-01-10T13:04:13,487 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.11 -I/usr/include/python3.11 -c pylammpstrj/lammpstrj/box.c -o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/box.o -g -O3 -Wall -Wextra 2024-01-10T13:04:13,637 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.11 -I/usr/include/python3.11 -c pylammpstrj/lammpstrj/read.c -o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/read.o -g -O3 -Wall -Wextra 2024-01-10T13:04:14,223 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.11 -I/usr/include/python3.11 -c pylammpstrj/lammpstrj/select.c -o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/select.o -g -O3 -Wall -Wextra 2024-01-10T13:04:14,722 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.11 -I/usr/include/python3.11 -c pylammpstrj/lammpstrj/skip.c -o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/skip.o -g -O3 -Wall -Wextra 2024-01-10T13:04:14,900 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.11 -I/usr/include/python3.11 -c pylammpstrj/lammpstrj/trajectory.c -o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/trajectory.o -g -O3 -Wall -Wextra 2024-01-10T13:04:15,071 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.11 -I/usr/include/python3.11 -c pylammpstrj/pylammpstrjmodule.c -o build/temp.linux-armv7l-cpython-311/pylammpstrj/pylammpstrjmodule.o -g -O3 -Wall -Wextra 2024-01-10T13:04:15,484 pylammpstrj/pylammpstrjmodule.c:529:22: warning: cast between incompatible function types from ‘PyObject * (*)(PyTrajectoryObject *, PyObject *, PyObject *)’ {aka ‘struct _object * (*)(PyTrajectoryObject *, struct _object *, struct _object *)’} to ‘PyObject * (*)(PyObject *, PyObject *)’ {aka ‘struct _object * (*)(struct _object *, struct _object *)’} [-Wcast-function-type] 2024-01-10T13:04:15,485 529 | {"select_atoms", (PyCFunction) PyTrajectory_select_atoms, 2024-01-10T13:04:15,485 | ^ 2024-01-10T13:04:15,486 pylammpstrj/pylammpstrjmodule.c:576:14: warning: cast between incompatible function types from ‘PyObject * (*)(PyObject *, PyObject *, PyObject *)’ {aka ‘struct _object * (*)(struct _object *, struct _object *, struct _object *)’} to ‘PyObject * (*)(PyObject *, PyObject *)’ {aka ‘struct _object * (*)(struct _object *, struct _object *)’} [-Wcast-function-type] 2024-01-10T13:04:15,487 576 | {"read", (PyCFunction) pylammpstrj_read, METH_VARARGS | METH_KEYWORDS, 2024-01-10T13:04:15,487 | ^ 2024-01-10T13:04:16,165 In file included from /usr/include/python3.11/Python.h:44, 2024-01-10T13:04:16,165 from pylammpstrj/pylammpstrjmodule.c:2: 2024-01-10T13:04:16,166 In function ‘Py_DECREF’, 2024-01-10T13:04:16,167 inlined from ‘PyInit_pylammpstrj’ at pylammpstrj/pylammpstrjmodule.c:622:9: 2024-01-10T13:04:16,167 /usr/include/python3.11/object.h:537:13: warning: array subscript ‘PyObject {aka struct _object}[0]’ is partly outside array bounds of ‘PyObject[0]’ {aka ‘struct _object[]’} [-Warray-bounds] 2024-01-10T13:04:16,168 537 | if (--op->ob_refcnt == 0) { 2024-01-10T13:04:16,168 | ~~^~~~~~~~~~~ 2024-01-10T13:04:16,169 pylammpstrj/pylammpstrjmodule.c: In function ‘PyInit_pylammpstrj’: 2024-01-10T13:04:16,170 pylammpstrj/pylammpstrjmodule.c:589:15: note: object ‘m’ of size 4 2024-01-10T13:04:16,171 589 | PyObject *m; 2024-01-10T13:04:16,171 | ^ 2024-01-10T13:04:16,172 In function ‘Py_DECREF’, 2024-01-10T13:04:16,173 inlined from ‘PyInit_pylammpstrj’ at pylammpstrj/pylammpstrjmodule.c:622:9: 2024-01-10T13:04:16,173 /usr/include/python3.11/object.h:537:8: warning: array subscript ‘PyObject {aka struct _object}[0]’ is partly outside array bounds of ‘PyObject[0]’ {aka ‘struct _object[]’} [-Warray-bounds] 2024-01-10T13:04:16,174 537 | if (--op->ob_refcnt == 0) { 2024-01-10T13:04:16,175 | ^ 2024-01-10T13:04:16,175 pylammpstrj/pylammpstrjmodule.c: In function ‘PyInit_pylammpstrj’: 2024-01-10T13:04:16,176 pylammpstrj/pylammpstrjmodule.c:589:15: note: object ‘m’ of size 4 2024-01-10T13:04:16,176 589 | PyObject *m; 2024-01-10T13:04:16,177 | ^ 2024-01-10T13:04:16,178 In function ‘Py_DECREF’, 2024-01-10T13:04:16,178 inlined from ‘PyInit_pylammpstrj’ at pylammpstrj/pylammpstrjmodule.c:611:9: 2024-01-10T13:04:16,179 /usr/include/python3.11/object.h:537:13: warning: array subscript ‘PyObject {aka struct _object}[0]’ is partly outside array bounds of ‘PyObject[0]’ {aka ‘struct _object[]’} [-Warray-bounds] 2024-01-10T13:04:16,179 537 | if (--op->ob_refcnt == 0) { 2024-01-10T13:04:16,180 | ~~^~~~~~~~~~~ 2024-01-10T13:04:16,181 pylammpstrj/pylammpstrjmodule.c: In function ‘PyInit_pylammpstrj’: 2024-01-10T13:04:16,182 pylammpstrj/pylammpstrjmodule.c:589:15: note: object ‘m’ of size 4 2024-01-10T13:04:16,182 589 | PyObject *m; 2024-01-10T13:04:16,183 | ^ 2024-01-10T13:04:16,183 In function ‘Py_DECREF’, 2024-01-10T13:04:16,184 inlined from ‘PyInit_pylammpstrj’ at pylammpstrj/pylammpstrjmodule.c:611:9: 2024-01-10T13:04:16,184 /usr/include/python3.11/object.h:537:8: warning: array subscript ‘PyObject {aka struct _object}[0]’ is partly outside array bounds of ‘PyObject[0]’ {aka ‘struct _object[]’} [-Warray-bounds] 2024-01-10T13:04:16,185 537 | if (--op->ob_refcnt == 0) { 2024-01-10T13:04:16,185 | ^ 2024-01-10T13:04:16,186 pylammpstrj/pylammpstrjmodule.c: In function ‘PyInit_pylammpstrj’: 2024-01-10T13:04:16,186 pylammpstrj/pylammpstrjmodule.c:589:15: note: object ‘m’ of size 4 2024-01-10T13:04:16,187 589 | PyObject *m; 2024-01-10T13:04:16,187 | ^ 2024-01-10T13:04:16,187 In function ‘Py_DECREF’, 2024-01-10T13:04:16,188 inlined from ‘PyInit_pylammpstrj’ at pylammpstrj/pylammpstrjmodule.c:602:9: 2024-01-10T13:04:16,188 /usr/include/python3.11/object.h:537:13: warning: array subscript ‘PyObject {aka struct _object}[0]’ is partly outside array bounds of ‘PyObject[0]’ {aka ‘struct _object[]’} [-Warray-bounds] 2024-01-10T13:04:16,189 537 | if (--op->ob_refcnt == 0) { 2024-01-10T13:04:16,189 | ~~^~~~~~~~~~~ 2024-01-10T13:04:16,190 pylammpstrj/pylammpstrjmodule.c: In function ‘PyInit_pylammpstrj’: 2024-01-10T13:04:16,190 pylammpstrj/pylammpstrjmodule.c:589:15: note: object ‘m’ of size 4 2024-01-10T13:04:16,191 589 | PyObject *m; 2024-01-10T13:04:16,192 | ^ 2024-01-10T13:04:16,192 In function ‘Py_DECREF’, 2024-01-10T13:04:16,193 inlined from ‘PyInit_pylammpstrj’ at pylammpstrj/pylammpstrjmodule.c:602:9: 2024-01-10T13:04:16,194 /usr/include/python3.11/object.h:537:8: warning: array subscript ‘PyObject {aka struct _object}[0]’ is partly outside array bounds of ‘PyObject[0]’ {aka ‘struct _object[]’} [-Warray-bounds] 2024-01-10T13:04:16,194 537 | if (--op->ob_refcnt == 0) { 2024-01-10T13:04:16,195 | ^ 2024-01-10T13:04:16,196 pylammpstrj/pylammpstrjmodule.c: In function ‘PyInit_pylammpstrj’: 2024-01-10T13:04:16,196 pylammpstrj/pylammpstrjmodule.c:589:15: note: object ‘m’ of size 4 2024-01-10T13:04:16,197 589 | PyObject *m; 2024-01-10T13:04:16,198 | ^ 2024-01-10T13:04:16,286 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/atom.o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/average.o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/box.o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/read.o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/select.o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/skip.o build/temp.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/trajectory.o build/temp.linux-armv7l-cpython-311/pylammpstrj/pylammpstrjmodule.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/pylammpstrj.cpython-311-arm-linux-gnueabihf.so 2024-01-10T13:04:16,400 installing to build/bdist.linux-armv7l/wheel 2024-01-10T13:04:16,401 running install 2024-01-10T13:04:16,424 running install_lib 2024-01-10T13:04:16,429 creating build/bdist.linux-armv7l 2024-01-10T13:04:16,429 creating build/bdist.linux-armv7l/wheel 2024-01-10T13:04:16,431 creating build/bdist.linux-armv7l/wheel/pylammpstrj 2024-01-10T13:04:16,432 creating build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T13:04:16,433 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/read.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T13:04:16,436 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/average.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T13:04:16,438 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/skip.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T13:04:16,440 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/atom.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T13:04:16,442 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/trajectory.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T13:04:16,444 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/select.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T13:04:16,446 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/lammpstrj/box.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T13:04:16,448 creating build/bdist.linux-armv7l/wheel/pylammpstrj/include 2024-01-10T13:04:16,449 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/include/utils.h -> build/bdist.linux-armv7l/wheel/pylammpstrj/include 2024-01-10T13:04:16,451 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/include/pylammpstrjmodule.h -> build/bdist.linux-armv7l/wheel/pylammpstrj/include 2024-01-10T13:04:16,453 copying build/lib.linux-armv7l-cpython-311/pylammpstrj/pylammpstrjmodule.c -> build/bdist.linux-armv7l/wheel/pylammpstrj 2024-01-10T13:04:16,456 copying build/lib.linux-armv7l-cpython-311/pylammpstrj.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2024-01-10T13:04:16,460 running install_egg_info 2024-01-10T13:04:16,464 Copying pylammpstrj.egg-info to build/bdist.linux-armv7l/wheel/pylammpstrj-1.0.2rc0-py3.11.egg-info 2024-01-10T13:04:16,473 running install_scripts 2024-01-10T13:04:16,525 creating build/bdist.linux-armv7l/wheel/pylammpstrj-1.0.2rc0.dist-info/WHEEL 2024-01-10T13:04:16,527 creating '/tmp/pip-wheel-2dw_7cte/.tmp-vondh__b/pylammpstrj-1.0.2rc0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-10T13:04:16,550 adding 'pylammpstrj.cpython-311-arm-linux-gnueabihf.so' 2024-01-10T13:04:16,554 adding 'pylammpstrj/pylammpstrjmodule.c' 2024-01-10T13:04:16,556 adding 'pylammpstrj/include/pylammpstrjmodule.h' 2024-01-10T13:04:16,558 adding 'pylammpstrj/include/utils.h' 2024-01-10T13:04:16,561 adding 'pylammpstrj/lammpstrj/atom.c' 2024-01-10T13:04:16,562 adding 'pylammpstrj/lammpstrj/average.c' 2024-01-10T13:04:16,564 adding 'pylammpstrj/lammpstrj/box.c' 2024-01-10T13:04:16,566 adding 'pylammpstrj/lammpstrj/read.c' 2024-01-10T13:04:16,568 adding 'pylammpstrj/lammpstrj/select.c' 2024-01-10T13:04:16,569 adding 'pylammpstrj/lammpstrj/skip.c' 2024-01-10T13:04:16,571 adding 'pylammpstrj/lammpstrj/trajectory.c' 2024-01-10T13:04:16,578 adding 'pylammpstrj-1.0.2rc0.dist-info/LICENSE' 2024-01-10T13:04:16,586 adding 'pylammpstrj-1.0.2rc0.dist-info/METADATA' 2024-01-10T13:04:16,587 adding 'pylammpstrj-1.0.2rc0.dist-info/WHEEL' 2024-01-10T13:04:16,588 adding 'pylammpstrj-1.0.2rc0.dist-info/top_level.txt' 2024-01-10T13:04:16,589 adding 'pylammpstrj-1.0.2rc0.dist-info/RECORD' 2024-01-10T13:04:16,592 removing build/bdist.linux-armv7l/wheel 2024-01-10T13:04:16,721 Building wheel for pylammpstrj (pyproject.toml): finished with status 'done' 2024-01-10T13:04:16,729 Created wheel for pylammpstrj: filename=pylammpstrj-1.0.2rc0-cp311-cp311-linux_armv7l.whl size=94225 sha256=808ff401d0dd1ef7df6193a496d5b005825c6d3820cbc90f1a63213ed293bc95 2024-01-10T13:04:16,731 Stored in directory: /tmp/pip-ephem-wheel-cache-w22mr35s/wheels/6a/9f/ab/f213c39b8a26501b125f56918d56fdf9b36bdc3a1946e880f9 2024-01-10T13:04:16,776 Successfully built pylammpstrj 2024-01-10T13:04:16,784 Removed build tracker: '/tmp/pip-build-tracker-y9ddfhv2'