2024-01-10T15:11:10,918 Created temporary directory: /tmp/pip-build-tracker-zjs7cllo 2024-01-10T15:11:10,919 Initialized build tracking at /tmp/pip-build-tracker-zjs7cllo 2024-01-10T15:11:10,920 Created build tracker: /tmp/pip-build-tracker-zjs7cllo 2024-01-10T15:11:10,920 Entered build tracker: /tmp/pip-build-tracker-zjs7cllo 2024-01-10T15:11:10,920 Created temporary directory: /tmp/pip-wheel-ou0kd3x1 2024-01-10T15:11:10,925 Created temporary directory: /tmp/pip-ephem-wheel-cache-vzdgyzqw 2024-01-10T15:11:10,949 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-10T15:11:10,952 2 location(s) to search for versions of pylammpstrj: 2024-01-10T15:11:10,952 * https://pypi.org/simple/pylammpstrj/ 2024-01-10T15:11:10,952 * https://www.piwheels.org/simple/pylammpstrj/ 2024-01-10T15:11:10,953 Fetching project page and analyzing links: https://pypi.org/simple/pylammpstrj/ 2024-01-10T15:11:10,953 Getting page https://pypi.org/simple/pylammpstrj/ 2024-01-10T15:11:10,955 Found index url https://pypi.org/simple/ 2024-01-10T15:11:11,005 Fetched page https://pypi.org/simple/pylammpstrj/ as application/vnd.pypi.simple.v1+json 2024-01-10T15:11:11,008 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/a3/57/a114ab4ae001790823689ce9b49c13a914f60f7875e67d7f2d7c5f72e465/pylammpstrj-1.0.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,009 Found link https://files.pythonhosted.org/packages/22/bb/a0b7cb4ae082fd59081908f259c06d6dc0aa40cd3a00191a1c1ea44422b2/pylammpstrj-1.0.0.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.0 2024-01-10T15:11:11,009 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/cd/03/798cd6908b3f5469192ae69adf8e21869cf77b10c2d4c976dc2048500ef9/pylammpstrj-1.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,010 Found link https://files.pythonhosted.org/packages/23/5d/89b7b602b9385193b2a45002a796b7fa4165175b83ff3924414dd0221062/pylammpstrj-1.0.1.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.1 2024-01-10T15:11:11,010 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/42/e5/88e1467005648fdba2f86178a4cf8587d7f8d1d49c21e435367929a8a8bc/pylammpstrj-1.0.2a0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,010 Found link https://files.pythonhosted.org/packages/0d/66/cdb370eb9514850d814b9d4aa9dd131c5c6c6badd84e92a4ffc395d6602d/pylammpstrj-1.0.2a0.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.2a0 2024-01-10T15:11:11,011 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/e2/88/54f41e14bbc98ef3fd7d4e635ce27a7dfc6dcc489d8f91e0f8c91e9a8edd/pylammpstrj-1.0.2rc0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,011 Found link https://files.pythonhosted.org/packages/cb/a6/57f8e9f684840dd85f65f3b6595740eb31a8fc6d62d6e599083ff789cd77/pylammpstrj-1.0.2rc0.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.2rc0 2024-01-10T15:11:11,011 Skipping link: No binaries permitted for pylammpstrj: https://files.pythonhosted.org/packages/53/f0/1e7f5d9b4840a63142c13b35bbba27b9aaa312dd0f12f6437fd1e6d1ef04/pylammpstrj-1.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,012 Found link https://files.pythonhosted.org/packages/3a/fb/a71ddf18e67e9ed88b62f3991a654453e1c0bcb643cff7043771bd8195f3/pylammpstrj-1.0.2.tar.gz (from https://pypi.org/simple/pylammpstrj/) (requires-python:>=3.8), version: 1.0.2 2024-01-10T15:11:11,012 Fetching project page and analyzing links: https://www.piwheels.org/simple/pylammpstrj/ 2024-01-10T15:11:11,013 Getting page https://www.piwheels.org/simple/pylammpstrj/ 2024-01-10T15:11:11,014 Found index url https://www.piwheels.org/simple/ 2024-01-10T15:11:11,099 Fetched page https://www.piwheels.org/simple/pylammpstrj/ as text/html 2024-01-10T15:11:11,104 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2-cp311-cp311-linux_armv6l.whl#sha256=153d52803acd4f0bfeb9a6477c18077b00cd7b4b9c0577fbf7d1cecc14f67bf2 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,104 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2-cp311-cp311-linux_armv7l.whl#sha256=153d52803acd4f0bfeb9a6477c18077b00cd7b4b9c0577fbf7d1cecc14f67bf2 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,104 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2-cp39-cp39-linux_armv6l.whl#sha256=2b042da0da38e28350f4b2443f1f46f393d216727bb81adb38e57ef3c29f930b (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,105 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2-cp39-cp39-linux_armv7l.whl#sha256=2b042da0da38e28350f4b2443f1f46f393d216727bb81adb38e57ef3c29f930b (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,105 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2rc0-cp311-cp311-linux_armv6l.whl#sha256=808ff401d0dd1ef7df6193a496d5b005825c6d3820cbc90f1a63213ed293bc95 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,105 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2rc0-cp311-cp311-linux_armv7l.whl#sha256=808ff401d0dd1ef7df6193a496d5b005825c6d3820cbc90f1a63213ed293bc95 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,105 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2a0-cp311-cp311-linux_armv6l.whl#sha256=cc39977a370b32ed681a142f5837e63d34c3afa668c609b8ac198995e538a26b (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,105 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2a0-cp311-cp311-linux_armv7l.whl#sha256=cc39977a370b32ed681a142f5837e63d34c3afa668c609b8ac198995e538a26b (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,106 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2a0-cp39-cp39-linux_armv6l.whl#sha256=125afb6b45786da26a14e4cf5acaf576cc0ff49b85e572c8bb2b2559a96cc490 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,106 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.2a0-cp39-cp39-linux_armv7l.whl#sha256=125afb6b45786da26a14e4cf5acaf576cc0ff49b85e572c8bb2b2559a96cc490 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,106 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=91dfc7c58f20dfaad14faa1fc5bc20ecda185e65f40f84c56b35eb8fb6d759d1 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,106 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=91dfc7c58f20dfaad14faa1fc5bc20ecda185e65f40f84c56b35eb8fb6d759d1 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,106 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=99797b027aeafbb87c0454d320f0f3b100d9014e13187ac54b533b6e3e7297d6 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,107 Skipping link: No binaries permitted for pylammpstrj: https://www.piwheels.org/simple/pylammpstrj/pylammpstrj-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=99797b027aeafbb87c0454d320f0f3b100d9014e13187ac54b533b6e3e7297d6 (from https://www.piwheels.org/simple/pylammpstrj/) (requires-python:>=3.8) 2024-01-10T15:11:11,107 Skipping link: not a file: https://www.piwheels.org/simple/pylammpstrj/ 2024-01-10T15:11:11,107 Skipping link: not a file: https://pypi.org/simple/pylammpstrj/ 2024-01-10T15:11:11,125 Given no hashes to check 1 links for project 'pylammpstrj': discarding no candidates 2024-01-10T15:11:11,141 Collecting pylammpstrj==1.0.2rc0 2024-01-10T15:11:11,144 Created temporary directory: /tmp/pip-unpack-ppxf59td 2024-01-10T15:11:11,186 Downloading pylammpstrj-1.0.2rc0.tar.gz (51 kB) 2024-01-10T15:11:11,473 Added pylammpstrj==1.0.2rc0 from https://files.pythonhosted.org/packages/cb/a6/57f8e9f684840dd85f65f3b6595740eb31a8fc6d62d6e599083ff789cd77/pylammpstrj-1.0.2rc0.tar.gz to build tracker '/tmp/pip-build-tracker-zjs7cllo' 2024-01-10T15:11:11,479 Created temporary directory: /tmp/pip-build-env-vxkgprew 2024-01-10T15:11:11,500 Installing build dependencies: started 2024-01-10T15:11:11,502 Running command pip subprocess to install build dependencies 2024-01-10T15:11:12,693 Using pip 23.3 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2024-01-10T15:11:13,229 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-10T15:11:14,647 Collecting setuptools 2024-01-10T15:11:14,663 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl (819 kB) 2024-01-10T15:11:16,627 Installing collected packages: setuptools 2024-01-10T15:11:18,791 Successfully installed setuptools-69.0.3 2024-01-10T15:11:18,973 WARNING: There was an error checking the latest version of pip. 2024-01-10T15:11:19,241 Installing build dependencies: finished with status 'done' 2024-01-10T15:11:19,245 Getting requirements to build wheel: started 2024-01-10T15:11:19,246 Running command Getting requirements to build wheel 2024-01-10T15:11:20,058 running egg_info 2024-01-10T15:11:20,062 writing pylammpstrj.egg-info/PKG-INFO 2024-01-10T15:11:20,066 writing dependency_links to pylammpstrj.egg-info/dependency_links.txt 2024-01-10T15:11:20,069 writing top-level names to pylammpstrj.egg-info/top_level.txt 2024-01-10T15:11:20,090 reading manifest file 'pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T15:11:20,092 reading manifest template 'MANIFEST.in' 2024-01-10T15:11:20,095 adding license file 'LICENSE' 2024-01-10T15:11:20,098 writing manifest file 'pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T15:11:20,194 Getting requirements to build wheel: finished with status 'done' 2024-01-10T15:11:20,204 Installing backend dependencies: started 2024-01-10T15:11:20,205 Running command pip subprocess to install backend dependencies 2024-01-10T15:11:21,365 Using pip 23.3 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2024-01-10T15:11:21,899 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-10T15:11:22,305 Collecting wheel 2024-01-10T15:11:22,326 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-01-10T15:11:23,926 Installing collected packages: wheel 2024-01-10T15:11:24,146 Creating /tmp/pip-build-env-vxkgprew/normal/bin 2024-01-10T15:11:24,148 changing mode of /tmp/pip-build-env-vxkgprew/normal/bin/wheel to 755 2024-01-10T15:11:24,161 Successfully installed wheel-0.42.0 2024-01-10T15:11:24,340 WARNING: There was an error checking the latest version of pip. 2024-01-10T15:11:24,562 Installing backend dependencies: finished with status 'done' 2024-01-10T15:11:24,564 Created temporary directory: /tmp/pip-modern-metadata-9yywbae_ 2024-01-10T15:11:24,567 Preparing metadata (pyproject.toml): started 2024-01-10T15:11:24,568 Running command Preparing metadata (pyproject.toml) 2024-01-10T15:11:25,385 running dist_info 2024-01-10T15:11:25,390 creating /tmp/pip-modern-metadata-9yywbae_/pylammpstrj.egg-info 2024-01-10T15:11:25,395 writing /tmp/pip-modern-metadata-9yywbae_/pylammpstrj.egg-info/PKG-INFO 2024-01-10T15:11:25,399 writing dependency_links to /tmp/pip-modern-metadata-9yywbae_/pylammpstrj.egg-info/dependency_links.txt 2024-01-10T15:11:25,402 writing top-level names to /tmp/pip-modern-metadata-9yywbae_/pylammpstrj.egg-info/top_level.txt 2024-01-10T15:11:25,403 writing manifest file '/tmp/pip-modern-metadata-9yywbae_/pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T15:11:25,422 reading manifest file '/tmp/pip-modern-metadata-9yywbae_/pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T15:11:25,425 reading manifest template 'MANIFEST.in' 2024-01-10T15:11:25,427 adding license file 'LICENSE' 2024-01-10T15:11:25,430 writing manifest file '/tmp/pip-modern-metadata-9yywbae_/pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T15:11:25,431 creating '/tmp/pip-modern-metadata-9yywbae_/pylammpstrj-1.0.2rc0.dist-info' 2024-01-10T15:11:25,562 Preparing metadata (pyproject.toml): finished with status 'done' 2024-01-10T15:11:25,571 Source in /tmp/pip-wheel-ou0kd3x1/pylammpstrj_3c7a56ad8bda44f0ad7459938e699c37 has version 1.0.2rc0, which satisfies requirement pylammpstrj==1.0.2rc0 from https://files.pythonhosted.org/packages/cb/a6/57f8e9f684840dd85f65f3b6595740eb31a8fc6d62d6e599083ff789cd77/pylammpstrj-1.0.2rc0.tar.gz 2024-01-10T15:11:25,572 Removed pylammpstrj==1.0.2rc0 from https://files.pythonhosted.org/packages/cb/a6/57f8e9f684840dd85f65f3b6595740eb31a8fc6d62d6e599083ff789cd77/pylammpstrj-1.0.2rc0.tar.gz from build tracker '/tmp/pip-build-tracker-zjs7cllo' 2024-01-10T15:11:25,581 Created temporary directory: /tmp/pip-unpack-t4gq_f9l 2024-01-10T15:11:25,582 Created temporary directory: /tmp/pip-unpack-5cmrsfrm 2024-01-10T15:11:25,588 Building wheels for collected packages: pylammpstrj 2024-01-10T15:11:25,592 Created temporary directory: /tmp/pip-wheel-4pt4nzp0 2024-01-10T15:11:25,592 Destination directory: /tmp/pip-wheel-4pt4nzp0 2024-01-10T15:11:25,594 Building wheel for pylammpstrj (pyproject.toml): started 2024-01-10T15:11:25,595 Running command Building wheel for pylammpstrj (pyproject.toml) 2024-01-10T15:11:26,407 running bdist_wheel 2024-01-10T15:11:26,424 running build 2024-01-10T15:11:26,425 running build_py 2024-01-10T15:11:26,430 running egg_info 2024-01-10T15:11:26,434 writing pylammpstrj.egg-info/PKG-INFO 2024-01-10T15:11:26,437 writing dependency_links to pylammpstrj.egg-info/dependency_links.txt 2024-01-10T15:11:26,439 writing top-level names to pylammpstrj.egg-info/top_level.txt 2024-01-10T15:11:26,449 reading manifest file 'pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T15:11:26,451 reading manifest template 'MANIFEST.in' 2024-01-10T15:11:26,453 adding license file 'LICENSE' 2024-01-10T15:11:26,456 writing manifest file 'pylammpstrj.egg-info/SOURCES.txt' 2024-01-10T15:11:26,460 creating build 2024-01-10T15:11:26,460 creating build/lib.linux-armv7l-cpython-39 2024-01-10T15:11:26,461 creating build/lib.linux-armv7l-cpython-39/pylammpstrj 2024-01-10T15:11:26,462 copying pylammpstrj/pylammpstrjmodule.c -> build/lib.linux-armv7l-cpython-39/pylammpstrj 2024-01-10T15:11:26,465 creating build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj 2024-01-10T15:11:26,466 copying pylammpstrj/lammpstrj/atom.c -> build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj 2024-01-10T15:11:26,468 copying pylammpstrj/lammpstrj/average.c -> build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj 2024-01-10T15:11:26,470 copying pylammpstrj/lammpstrj/box.c -> build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj 2024-01-10T15:11:26,472 copying pylammpstrj/lammpstrj/read.c -> build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj 2024-01-10T15:11:26,475 copying pylammpstrj/lammpstrj/select.c -> build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj 2024-01-10T15:11:26,477 copying pylammpstrj/lammpstrj/skip.c -> build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj 2024-01-10T15:11:26,479 copying pylammpstrj/lammpstrj/trajectory.c -> build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj 2024-01-10T15:11:26,481 creating build/lib.linux-armv7l-cpython-39/pylammpstrj/include 2024-01-10T15:11:26,482 copying pylammpstrj/include/pylammpstrjmodule.h -> build/lib.linux-armv7l-cpython-39/pylammpstrj/include 2024-01-10T15:11:26,484 copying pylammpstrj/include/utils.h -> build/lib.linux-armv7l-cpython-39/pylammpstrj/include 2024-01-10T15:11:26,487 running build_ext 2024-01-10T15:11:26,492 building 'pylammpstrj' extension 2024-01-10T15:11:26,493 creating build/temp.linux-armv7l-cpython-39 2024-01-10T15:11:26,494 creating build/temp.linux-armv7l-cpython-39/pylammpstrj 2024-01-10T15:11:26,494 creating build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj 2024-01-10T15:11:26,496 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.9 -I/usr/include/python3.9 -c pylammpstrj/lammpstrj/atom.c -o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/atom.o -g -O3 -Wall -Wextra 2024-01-10T15:11:26,645 pylammpstrj/lammpstrj/atom.c: In function ‘str_to_str’: 2024-01-10T15:11:26,645 pylammpstrj/lammpstrj/atom.c:178:5: warning: ‘strncpy’ specified bound 10 equals destination size [-Wstringop-truncation] 2024-01-10T15:11:26,645 178 | strncpy(af.s, field, ATOM_FIELD_STR_LIMIT); 2024-01-10T15:11:26,646 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-10T15:11:26,773 pylammpstrj/lammpstrj/atom.c: In function ‘get_additional_types’: 2024-01-10T15:11:26,774 pylammpstrj/lammpstrj/atom.c:150:5: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 2024-01-10T15:11:26,774 150 | strncpy(buffer, line, READ_BUFFER_LIMIT); 2024-01-10T15:11:26,774 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-10T15:11:26,817 pylammpstrj/lammpstrj/atom.c: In function ‘atom_builder_new’: 2024-01-10T15:11:26,817 pylammpstrj/lammpstrj/atom.c:222:5: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 2024-01-10T15:11:26,818 222 | strncpy(ab.dump_format, dump_format, READ_BUFFER_LIMIT); 2024-01-10T15:11:26,818 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-10T15:11:26,862 pylammpstrj/lammpstrj/atom.c: In function ‘read_atom_entry’: 2024-01-10T15:11:26,862 pylammpstrj/lammpstrj/atom.c:304:21: warning: ‘strncpy’ output may be truncated copying 3 bytes from a string of length 9 [-Wstringop-truncation] 2024-01-10T15:11:26,862 304 | strncpy(atom.label, res.s, LABEL_LIMIT); 2024-01-10T15:11:26,863 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-10T15:11:26,990 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.9 -I/usr/include/python3.9 -c pylammpstrj/lammpstrj/average.c -o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/average.o -g -O3 -Wall -Wextra 2024-01-10T15:11:27,184 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.9 -I/usr/include/python3.9 -c pylammpstrj/lammpstrj/box.c -o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/box.o -g -O3 -Wall -Wextra 2024-01-10T15:11:27,330 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.9 -I/usr/include/python3.9 -c pylammpstrj/lammpstrj/read.c -o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/read.o -g -O3 -Wall -Wextra 2024-01-10T15:11:27,556 pylammpstrj/lammpstrj/read.c: In function ‘trajectory_read’: 2024-01-10T15:11:27,557 pylammpstrj/lammpstrj/read.c:102:9: warning: ‘strncpy’ specified bound 128 equals destination size [-Wstringop-truncation] 2024-01-10T15:11:27,557 102 | strncpy(dump_format, user_format, READ_BUFFER_LIMIT); 2024-01-10T15:11:27,557 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-01-10T15:11:27,908 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.9 -I/usr/include/python3.9 -c pylammpstrj/lammpstrj/select.c -o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/select.o -g -O3 -Wall -Wextra 2024-01-10T15:11:28,382 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.9 -I/usr/include/python3.9 -c pylammpstrj/lammpstrj/skip.c -o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/skip.o -g -O3 -Wall -Wextra 2024-01-10T15:11:28,551 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.9 -I/usr/include/python3.9 -c pylammpstrj/lammpstrj/trajectory.c -o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/trajectory.o -g -O3 -Wall -Wextra 2024-01-10T15:11:28,714 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ipylammpstrj/include/ -I/usr/include/python3.9 -I/usr/include/python3.9 -c pylammpstrj/pylammpstrjmodule.c -o build/temp.linux-armv7l-cpython-39/pylammpstrj/pylammpstrjmodule.o -g -O3 -Wall -Wextra 2024-01-10T15:11:29,025 pylammpstrj/pylammpstrjmodule.c:529:22: warning: cast between incompatible function types from ‘PyObject * (*)(PyTrajectoryObject *, PyObject *, PyObject *)’ {aka ‘struct _object * (*)(PyTrajectoryObject *, struct _object *, struct _object *)’} to ‘PyObject * (*)(PyObject *, PyObject *)’ {aka ‘struct _object * (*)(struct _object *, struct _object *)’} [-Wcast-function-type] 2024-01-10T15:11:29,026 529 | {"select_atoms", (PyCFunction) PyTrajectory_select_atoms, 2024-01-10T15:11:29,026 | ^ 2024-01-10T15:11:29,027 pylammpstrj/pylammpstrjmodule.c:576:14: warning: cast between incompatible function types from ‘PyObject * (*)(PyObject *, PyObject *, PyObject *)’ {aka ‘struct _object * (*)(struct _object *, struct _object *, struct _object *)’} to ‘PyObject * (*)(PyObject *, PyObject *)’ {aka ‘struct _object * (*)(struct _object *, struct _object *)’} [-Wcast-function-type] 2024-01-10T15:11:29,027 576 | {"read", (PyCFunction) pylammpstrj_read, METH_VARARGS | METH_KEYWORDS, 2024-01-10T15:11:29,027 | ^ 2024-01-10T15:11:29,748 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/atom.o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/average.o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/box.o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/read.o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/select.o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/skip.o build/temp.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/trajectory.o build/temp.linux-armv7l-cpython-39/pylammpstrj/pylammpstrjmodule.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/pylammpstrj.cpython-39-arm-linux-gnueabihf.so 2024-01-10T15:11:29,870 installing to build/bdist.linux-armv7l/wheel 2024-01-10T15:11:29,870 running install 2024-01-10T15:11:29,896 running install_lib 2024-01-10T15:11:29,901 creating build/bdist.linux-armv7l 2024-01-10T15:11:29,901 creating build/bdist.linux-armv7l/wheel 2024-01-10T15:11:29,902 copying build/lib.linux-armv7l-cpython-39/pylammpstrj.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel 2024-01-10T15:11:29,907 creating build/bdist.linux-armv7l/wheel/pylammpstrj 2024-01-10T15:11:29,908 creating build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T15:11:29,910 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/read.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T15:11:29,912 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/box.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T15:11:29,914 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/select.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T15:11:29,917 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/average.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T15:11:29,919 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/trajectory.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T15:11:29,921 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/skip.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T15:11:29,923 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/lammpstrj/atom.c -> build/bdist.linux-armv7l/wheel/pylammpstrj/lammpstrj 2024-01-10T15:11:29,925 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/pylammpstrjmodule.c -> build/bdist.linux-armv7l/wheel/pylammpstrj 2024-01-10T15:11:29,928 creating build/bdist.linux-armv7l/wheel/pylammpstrj/include 2024-01-10T15:11:29,929 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/include/utils.h -> build/bdist.linux-armv7l/wheel/pylammpstrj/include 2024-01-10T15:11:29,932 copying build/lib.linux-armv7l-cpython-39/pylammpstrj/include/pylammpstrjmodule.h -> build/bdist.linux-armv7l/wheel/pylammpstrj/include 2024-01-10T15:11:29,934 running install_egg_info 2024-01-10T15:11:29,938 Copying pylammpstrj.egg-info to build/bdist.linux-armv7l/wheel/pylammpstrj-1.0.2rc0-py3.9.egg-info 2024-01-10T15:11:29,947 running install_scripts 2024-01-10T15:11:29,996 creating build/bdist.linux-armv7l/wheel/pylammpstrj-1.0.2rc0.dist-info/WHEEL 2024-01-10T15:11:29,999 creating '/tmp/pip-wheel-4pt4nzp0/.tmp-25amolyt/pylammpstrj-1.0.2rc0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-10T15:11:30,023 adding 'pylammpstrj.cpython-39-arm-linux-gnueabihf.so' 2024-01-10T15:11:30,027 adding 'pylammpstrj/pylammpstrjmodule.c' 2024-01-10T15:11:30,029 adding 'pylammpstrj/include/pylammpstrjmodule.h' 2024-01-10T15:11:30,031 adding 'pylammpstrj/include/utils.h' 2024-01-10T15:11:30,034 adding 'pylammpstrj/lammpstrj/atom.c' 2024-01-10T15:11:30,036 adding 'pylammpstrj/lammpstrj/average.c' 2024-01-10T15:11:30,037 adding 'pylammpstrj/lammpstrj/box.c' 2024-01-10T15:11:30,039 adding 'pylammpstrj/lammpstrj/read.c' 2024-01-10T15:11:30,042 adding 'pylammpstrj/lammpstrj/select.c' 2024-01-10T15:11:30,043 adding 'pylammpstrj/lammpstrj/skip.c' 2024-01-10T15:11:30,045 adding 'pylammpstrj/lammpstrj/trajectory.c' 2024-01-10T15:11:30,052 adding 'pylammpstrj-1.0.2rc0.dist-info/LICENSE' 2024-01-10T15:11:30,059 adding 'pylammpstrj-1.0.2rc0.dist-info/METADATA' 2024-01-10T15:11:30,061 adding 'pylammpstrj-1.0.2rc0.dist-info/WHEEL' 2024-01-10T15:11:30,062 adding 'pylammpstrj-1.0.2rc0.dist-info/top_level.txt' 2024-01-10T15:11:30,064 adding 'pylammpstrj-1.0.2rc0.dist-info/RECORD' 2024-01-10T15:11:30,067 removing build/bdist.linux-armv7l/wheel 2024-01-10T15:11:30,180 Building wheel for pylammpstrj (pyproject.toml): finished with status 'done' 2024-01-10T15:11:30,187 Created wheel for pylammpstrj: filename=pylammpstrj-1.0.2rc0-cp39-cp39-linux_armv7l.whl size=93574 sha256=331b48a0c89e72abc6b27cdb881bc9b0d61cef969d94d06602040f5e75aa9569 2024-01-10T15:11:30,188 Stored in directory: /tmp/pip-ephem-wheel-cache-vzdgyzqw/wheels/a5/4f/a3/7f613ca7e3830c57a626dd98c476f8be4fd159acf502f34c7b 2024-01-10T15:11:30,204 Successfully built pylammpstrj 2024-01-10T15:11:30,209 Removed build tracker: '/tmp/pip-build-tracker-zjs7cllo'