2024-01-11T22:01:34,569 Created temporary directory: /tmp/pip-build-tracker-smnkpy37 2024-01-11T22:01:34,570 Initialized build tracking at /tmp/pip-build-tracker-smnkpy37 2024-01-11T22:01:34,571 Created build tracker: /tmp/pip-build-tracker-smnkpy37 2024-01-11T22:01:34,571 Entered build tracker: /tmp/pip-build-tracker-smnkpy37 2024-01-11T22:01:34,571 Created temporary directory: /tmp/pip-wheel-85fqiyva 2024-01-11T22:01:34,576 Created temporary directory: /tmp/pip-ephem-wheel-cache-6acewogj 2024-01-11T22:01:34,599 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-11T22:01:34,603 2 location(s) to search for versions of pyft: 2024-01-11T22:01:34,603 * https://pypi.org/simple/pyft/ 2024-01-11T22:01:34,603 * https://www.piwheels.org/simple/pyft/ 2024-01-11T22:01:34,604 Fetching project page and analyzing links: https://pypi.org/simple/pyft/ 2024-01-11T22:01:34,604 Getting page https://pypi.org/simple/pyft/ 2024-01-11T22:01:34,605 Found index url https://pypi.org/simple/ 2024-01-11T22:01:34,658 Fetched page https://pypi.org/simple/pyft/ as application/vnd.pypi.simple.v1+json 2024-01-11T22:01:34,663 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d7/62/f180b758be35243ef8a74361f533c974f7294541f16c9bc82cdcc29983e0/pyft-0.1.0-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,664 Found link https://files.pythonhosted.org/packages/c5/b3/4729bed033d7a353ec71381fa9e1ade1bf7a186a837ed3627b31265ddede/pyft-0.1.0.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.0 2024-01-11T22:01:34,664 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/cb/27/9e42da52a20d9b691ef37a8828764cd904af507b9107a386d55614566304/pyft-0.1.1-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,665 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/42/ec/1bf1615986fee7e2940dcd8902ef14457658d94208b01d95549253b62843/pyft-0.1.2-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,665 Found link https://files.pythonhosted.org/packages/0a/0b/139d65d937bc185b68d3eff484ce5c3ca5e3bfc3150b2020d0b604b64d66/pyft-0.1.2.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.2 2024-01-11T22:01:34,665 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/04/9b/b53f6e949dabc348f4bf60f9d11a473764e589d6041be074cbcf20a42900/pyft-0.1.3-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,666 Found link https://files.pythonhosted.org/packages/ab/26/5c78ed72341a5f6b18d9f84a1e9bc91739519c613d9051f732bf902f363d/pyft-0.1.3.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.3 2024-01-11T22:01:34,666 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/5f/76/cfcbbab37550bc51a7e8ea1bc59451ae618fb3eab2f20f7aa097bc615268/pyft-0.1.4-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,667 Found link https://files.pythonhosted.org/packages/c0/f0/c6f569449c4bbc95ba0281b2423d2c22fd957a7279f33b74ebd6aa94fefb/pyft-0.1.4.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.4 2024-01-11T22:01:34,667 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/b3/d8/e0bcc1d4dda64ccb39a697d7a2cf2f0afc1edddea2f97aa3b7351ada002d/pyft-0.1.5-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,668 Found link https://files.pythonhosted.org/packages/02/93/e6e05f3380af83b5c4b010925934d31dba5527b59d0f256aef8bd6b6b0d1/pyft-0.1.5.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.5 2024-01-11T22:01:34,668 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/7f/54/78d366d8c40d15e7e6ea673715003e9d3a1799bec389136fd3646cd2ee41/pyft-0.1.6-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,668 Found link https://files.pythonhosted.org/packages/a3/a5/862a667ea22060468fbb9a217ce8d25c4eda9ff6c64b79f5887e7d4123be/pyft-0.1.6.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.6 2024-01-11T22:01:34,669 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/ba/62/742233e64de296bde6230c31c8ac312c38ca40fa09f10cb36f8c3da3ba1b/pyft-0.1.7-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,669 Found link https://files.pythonhosted.org/packages/26/f9/bfc6b3b66cd901649cf13ea23361c69321e46ed3b1fe73981863371c14ea/pyft-0.1.7.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.7 2024-01-11T22:01:34,670 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/0b/b9/8bdacd074d2a6f38e3c2c3508cb1ddd1d1c00963e365f44c979bbd8c4df0/pyft-0.1.8-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,670 Found link https://files.pythonhosted.org/packages/ce/e7/c55525cdea4a7421cd6f08f16b85d094a3f95578f8d410ae6849e20ae1aa/pyft-0.1.8.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.8 2024-01-11T22:01:34,670 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/aa/81/12871893127d02cf1d8ad68c808878816523e038fbd8fc69ef390b2d3069/pyft-0.1.9-cp310-cp310-macosx_10_7_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,671 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/3a/6b/de60870d8a72ea0dd422eb38f9649692556599868f50cd8a62d5ce0c5e0c/pyft-0.1.9-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,671 Found link https://files.pythonhosted.org/packages/1e/7e/215d26ce7f6964e59e74252153d7c41d6ffa58f372bc2180bf9365f86a70/pyft-0.1.9.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.9 2024-01-11T22:01:34,671 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/98/34/486e083204140b4ee99d4eb669ffe4f9a52fe8a9fd0365a00b22d171b095/pyft-0.1.10-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,672 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/d0/9b/3f564e58355225004d47f2f0e666fbcf193520327cf208b7035d08228af2/pyft-0.1.10-cp39-cp39-manylinux_2_28_x86_64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,672 Found link https://files.pythonhosted.org/packages/b7/e9/85ad227a8e926f6f737e40243d9c7e74aabefb51808874b8b1b61a3582ef/pyft-0.1.10.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.10 2024-01-11T22:01:34,672 Skipping link: No binaries permitted for pyft: https://files.pythonhosted.org/packages/b9/06/a0c265c3680e44912f4d34fb2fee4307042417f75fb23b50d34f2d4e23ca/pyft-0.1.11-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/pyft/) (requires-python:>=3.7) 2024-01-11T22:01:34,673 Found link https://files.pythonhosted.org/packages/92/b0/bd729b1b3e99a2214e432386dd52d9d717b5559e8c95e1d4367ad0e10b19/pyft-0.1.11.tar.gz (from https://pypi.org/simple/pyft/) (requires-python:>=3.7), version: 0.1.11 2024-01-11T22:01:34,673 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyft/ 2024-01-11T22:01:34,674 Getting page https://www.piwheels.org/simple/pyft/ 2024-01-11T22:01:34,675 Found index url https://www.piwheels.org/simple/ 2024-01-11T22:01:34,743 Fetched page https://www.piwheels.org/simple/pyft/ as text/html 2024-01-11T22:01:34,744 Skipping link: not a file: https://www.piwheels.org/simple/pyft/ 2024-01-11T22:01:34,744 Skipping link: not a file: https://pypi.org/simple/pyft/ 2024-01-11T22:01:34,763 Given no hashes to check 1 links for project 'pyft': discarding no candidates 2024-01-11T22:01:34,780 Collecting pyft==0.1.11 2024-01-11T22:01:34,782 Created temporary directory: /tmp/pip-unpack-stx5_du9 2024-01-11T22:01:34,827 Downloading pyft-0.1.11.tar.gz (8.5 MB) 2024-01-11T22:01:35,978 Added pyft==0.1.11 from https://files.pythonhosted.org/packages/92/b0/bd729b1b3e99a2214e432386dd52d9d717b5559e8c95e1d4367ad0e10b19/pyft-0.1.11.tar.gz to build tracker '/tmp/pip-build-tracker-smnkpy37' 2024-01-11T22:01:35,982 Created temporary directory: /tmp/pip-build-env-sqcjz9ut 2024-01-11T22:01:35,992 Installing build dependencies: started 2024-01-11T22:01:35,993 Running command pip subprocess to install build dependencies 2024-01-11T22:01:37,162 Using pip 23.3.1 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2024-01-11T22:01:37,705 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-11T22:01:38,723 Collecting maturin<2.0,>=1.1 2024-01-11T22:01:38,740 Using cached https://www.piwheels.org/simple/maturin/maturin-1.4.0-cp39-cp39-linux_armv7l.whl (6.3 MB) 2024-01-11T22:01:39,040 Collecting tomli>=1.1.0 (from maturin<2.0,>=1.1) 2024-01-11T22:01:39,064 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2024-01-11T22:01:40,748 Installing collected packages: tomli, maturin 2024-01-11T22:01:41,336 Successfully installed maturin-1.4.0 tomli-2.0.1 2024-01-11T22:01:41,520 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-11T22:01:41,520 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-11T22:01:41,789 Installing build dependencies: finished with status 'done' 2024-01-11T22:01:41,793 Getting requirements to build wheel: started 2024-01-11T22:01:41,794 Running command Getting requirements to build wheel 2024-01-11T22:01:41,981 Getting requirements to build wheel: finished with status 'done' 2024-01-11T22:01:41,986 Created temporary directory: /tmp/pip-modern-metadata-3tu6yq0f 2024-01-11T22:01:41,988 Preparing metadata (pyproject.toml): started 2024-01-11T22:01:41,989 Running command Preparing metadata (pyproject.toml) 2024-01-11T22:01:42,626 Updating crates.io index 2024-01-11T22:01:47,742 Downloading crates ... 2024-01-11T22:01:48,726 Downloaded multimap v0.9.1 2024-01-11T22:01:48,892 Downloaded bio v1.5.0 2024-01-11T22:01:49,185 Downloaded rust-htslib v0.43.1 2024-01-11T22:01:49,253 Downloaded gbdt v0.1.2 2024-01-11T22:01:49,307 Downloaded curl-sys v0.4.70+curl-8.5.0 2024-01-11T22:01:54,084 Downloaded enum-map-derive v0.17.0 2024-01-11T22:01:54,102 Downloaded enum-map v2.7.3 2024-01-11T22:01:54,129 Downloaded console v0.15.8 2024-01-11T22:01:54,179 Downloaded clap_mangen v0.2.17 2024-01-11T22:01:54,198 Downloaded clap_complete v4.4.6 2024-01-11T22:01:54,243 Downloaded libz-sys v1.1.14 2024-01-11T22:01:55,487 🔗 Found pyo3 bindings 2024-01-11T22:01:55,805 🐍 Found CPython 3.9 at /usr/bin/python3 2024-01-11T22:01:55,805 📡 Using build options features from pyproject.toml 2024-01-11T22:01:55,817 pyft-0.1.11.dist-info 2024-01-11T22:01:55,817 Checking for Rust toolchain.... 2024-01-11T22:01:55,817 Running `maturin pep517 write-dist-info --metadata-directory /tmp/pip-modern-metadata-3tu6yq0f --interpreter /usr/bin/python3` 2024-01-11T22:01:55,837 Preparing metadata (pyproject.toml): finished with status 'done' 2024-01-11T22:01:55,843 Source in /tmp/pip-wheel-85fqiyva/pyft_40512a235c8244979978a289ee13d8cf has version 0.1.11, which satisfies requirement pyft==0.1.11 from https://files.pythonhosted.org/packages/92/b0/bd729b1b3e99a2214e432386dd52d9d717b5559e8c95e1d4367ad0e10b19/pyft-0.1.11.tar.gz 2024-01-11T22:01:55,844 Removed pyft==0.1.11 from https://files.pythonhosted.org/packages/92/b0/bd729b1b3e99a2214e432386dd52d9d717b5559e8c95e1d4367ad0e10b19/pyft-0.1.11.tar.gz from build tracker '/tmp/pip-build-tracker-smnkpy37' 2024-01-11T22:01:55,850 Created temporary directory: /tmp/pip-unpack-hj_vxya_ 2024-01-11T22:01:55,850 Created temporary directory: /tmp/pip-unpack-fqao2u7n 2024-01-11T22:01:55,852 Building wheels for collected packages: pyft 2024-01-11T22:01:55,856 Created temporary directory: /tmp/pip-wheel-unsx1jql 2024-01-11T22:01:55,857 Destination directory: /tmp/pip-wheel-unsx1jql 2024-01-11T22:01:55,859 Building wheel for pyft (pyproject.toml): started 2024-01-11T22:01:55,860 Running command Building wheel for pyft (pyproject.toml) 2024-01-11T22:01:56,024 Running `maturin pep517 build-wheel -i /usr/bin/python3 --compatibility off` 2024-01-11T22:01:56,950 🔗 Found pyo3 bindings 2024-01-11T22:01:57,232 🐍 Found CPython 3.9 at /usr/bin/python3 2024-01-11T22:01:57,232 📡 Using build options features from pyproject.toml 2024-01-11T22:01:58,386 Compiling libc v0.2.152 2024-01-11T22:01:58,386 Compiling proc-macro2 v1.0.76 2024-01-11T22:01:58,386 Compiling unicode-ident v1.0.12 2024-01-11T22:01:58,387 Compiling autocfg v1.1.0 2024-01-11T22:01:58,818 Compiling pkg-config v0.3.28 2024-01-11T22:02:06,355 Compiling quote v1.0.35 2024-01-11T22:02:09,706 Compiling jobserver v0.1.27 2024-01-11T22:02:10,180 Compiling syn v2.0.48 2024-01-11T22:02:10,766 Compiling syn v1.0.109 2024-01-11T22:02:11,317 Compiling cc v1.0.83 2024-01-11T22:02:13,030 Compiling cfg-if v1.0.0 2024-01-11T22:02:13,297 Compiling libm v0.2.8 2024-01-11T22:02:14,883 Compiling num-traits v0.2.17 2024-01-11T22:02:16,453 Compiling vcpkg v0.2.15 2024-01-11T22:02:26,174 Compiling cmake v0.1.50 2024-01-11T22:02:29,810 Compiling getrandom v0.2.12 2024-01-11T22:02:38,585 Compiling memchr v2.7.1 2024-01-11T22:02:43,918 Compiling libz-sys v1.1.14 2024-01-11T22:02:46,396 Compiling serde v1.0.195 2024-01-11T22:02:47,336 Compiling rustix v0.38.28 2024-01-11T22:02:48,563 Compiling target-lexicon v0.12.13 2024-01-11T22:02:53,173 Compiling linux-raw-sys v0.4.12 2024-01-11T22:03:01,277 Compiling bitflags v2.4.1 2024-01-11T22:03:12,453 Compiling serde_derive v1.0.195 2024-01-11T22:03:18,935 Compiling aho-corasick v1.1.2 2024-01-11T22:03:40,960 Compiling openssl-src v300.2.1+3.2.0 2024-01-11T22:03:42,875 Compiling version_check v0.9.4 2024-01-11T22:03:45,362 Compiling heck v0.4.1 2024-01-11T22:03:46,856 Compiling regex-syntax v0.8.2 2024-01-11T22:03:47,756 Compiling openssl-sys v0.9.98 2024-01-11T22:03:52,907 Compiling pyo3-build-config v0.19.2 2024-01-11T22:04:00,957 Compiling rand_core v0.6.4 2024-01-11T22:04:02,728 Compiling lock_api v0.4.11 2024-01-11T22:04:02,803 Compiling num-integer v0.1.45 2024-01-11T22:04:04,342 Compiling ppv-lite86 v0.2.17 2024-01-11T22:04:04,348 Compiling thiserror v1.0.56 2024-01-11T22:04:06,434 Compiling regex-automata v0.4.3 2024-01-11T22:04:07,218 Compiling crossbeam-utils v0.8.19 2024-01-11T22:04:09,469 Compiling lazy_static v1.4.0 2024-01-11T22:04:09,742 Compiling rand_chacha v0.3.1 2024-01-11T22:04:36,755 Compiling regex v1.10.2 2024-01-11T22:04:53,179 Compiling thiserror-impl v1.0.56 2024-01-11T22:05:10,603 Compiling matrixmultiply v0.3.8 2024-01-11T22:05:14,516 Compiling ident_case v1.0.1 2024-01-11T22:05:14,879 Compiling scopeguard v1.2.0 2024-01-11T22:05:15,354 Compiling paste v1.0.14 2024-01-11T22:05:15,400 Compiling bytemuck v1.14.0 2024-01-11T22:05:17,191 Compiling once_cell v1.19.0 2024-01-11T22:05:17,341 Compiling semver v0.1.20 2024-01-11T22:05:18,748 Compiling rustversion v1.0.14 2024-01-11T22:05:19,781 Compiling utf8parse v0.2.1 2024-01-11T22:05:20,236 Compiling strsim v0.10.0 2024-01-11T22:05:21,414 Compiling fnv v1.0.7 2024-01-11T22:05:21,626 Compiling darling_core v0.14.4 2024-01-11T22:05:23,005 Compiling anstyle-parse v0.2.3 2024-01-11T22:05:24,443 Compiling rustc_version v0.1.7 2024-01-11T22:05:34,634 Compiling safe_arch v0.7.1 2024-01-11T22:05:42,346 Compiling rand v0.8.5 2024-01-11T22:05:54,458 Compiling proc-macro-error-attr v1.0.4 2024-01-11T22:05:55,878 Compiling num-complex v0.4.4 2024-01-11T22:05:58,957 Compiling curl-sys v0.4.70+curl-8.5.0 2024-01-11T22:06:01,692 Compiling bzip2-sys v0.1.11+1.0.8 2024-01-11T22:06:02,704 Compiling lzma-sys v0.1.20 2024-01-11T22:06:04,144 Compiling num-rational v0.4.1 2024-01-11T22:06:05,742 Compiling either v1.9.0 2024-01-11T22:06:06,377 Compiling typenum v1.17.0 2024-01-11T22:06:07,104 Compiling colorchoice v1.0.0 2024-01-11T22:06:07,491 Compiling ryu v1.0.16 2024-01-11T22:06:09,943 Compiling rawpointer v0.2.1 2024-01-11T22:06:10,207 Compiling crc32fast v1.3.2 2024-01-11T22:06:11,135 Compiling tinyvec_macros v0.1.1 2024-01-11T22:06:11,282 Compiling anstyle-query v1.0.2 2024-01-11T22:06:11,626 Compiling anstyle v1.0.4 2024-01-11T22:06:12,317 Compiling itoa v1.0.10 2024-01-11T22:06:13,121 Compiling quick-error v1.2.3 2024-01-11T22:06:13,381 Compiling fs-utils v1.1.4 2024-01-11T22:06:14,164 Compiling anstream v0.6.5 2024-01-11T22:06:14,740 Compiling tinyvec v1.6.0 2024-01-11T22:06:40,114 Compiling crossbeam-epoch v0.9.18 2024-01-11T22:06:44,610 Compiling darling_macro v0.14.4 2024-01-11T22:06:47,313 Compiling wide v0.7.13 2024-01-11T22:06:50,493 Compiling newtype_derive v0.1.6 2024-01-11T22:06:54,755 Compiling proc-macro-error v1.0.4 2024-01-11T22:06:56,263 Compiling terminal_size v0.3.0 2024-01-11T22:06:56,821 Compiling approx v0.5.1 2024-01-11T22:06:57,731 Compiling libdeflate-sys v0.12.0 2024-01-11T22:06:58,511 Compiling byteorder v1.5.0 2024-01-11T22:07:00,095 Compiling feature-probe v0.1.1 2024-01-11T22:07:00,990 Compiling equivalent v1.0.1 2024-01-11T22:07:01,175 Compiling glob v0.3.1 2024-01-11T22:07:04,885 Compiling adler v1.0.2 2024-01-11T22:07:05,777 Compiling clap_lex v0.6.0 2024-01-11T22:07:08,753 Compiling rayon-core v1.12.0 2024-01-11T22:07:09,814 Compiling hashbrown v0.14.3 2024-01-11T22:07:10,193 Compiling clap_builder v4.4.15 2024-01-11T22:07:17,467 Compiling indexmap v2.1.0 2024-01-11T22:07:21,362 Compiling simba v0.6.0 2024-01-11T22:07:24,568 Compiling miniz_oxide v0.7.1 2024-01-11T22:07:40,302 Compiling hts-sys v2.1.1 2024-01-11T22:07:43,777 Compiling bv v0.11.1 2024-01-11T22:08:02,517 Compiling strum_macros v0.25.3 2024-01-11T22:08:24,396 Compiling darling v0.14.4 2024-01-11T22:08:24,583 Compiling crossbeam-deque v0.8.5 2024-01-11T22:08:44,571 Compiling unicode-normalization v0.1.22 2024-01-11T22:08:51,921 Compiling rand_distr v0.4.3 2024-01-11T22:08:54,621 Compiling pyo3-ffi v0.19.2 2024-01-11T22:08:56,428 Compiling clap_derive v4.4.7 2024-01-11T22:08:56,844 Compiling nalgebra-macros v0.1.0 2024-01-11T22:09:02,273 Compiling derive-new v0.5.9 2024-01-11T22:09:08,594 Compiling pin-project-internal v1.1.3 2024-01-11T22:09:17,838 Compiling anyhow v1.0.79 2024-01-11T22:09:20,302 Compiling serde_json v1.0.111 2024-01-11T22:09:21,453 Compiling portable-atomic v1.6.0 2024-01-11T22:09:22,051 Compiling percent-encoding v2.3.1 2024-01-11T22:09:23,245 Compiling parking_lot_core v0.9.9 2024-01-11T22:09:24,227 Compiling unicode-bidi v0.3.14 2024-01-11T22:09:24,857 Compiling pin-project v1.1.3 2024-01-11T22:09:25,084 Compiling form_urlencoded v1.2.1 2024-01-11T22:09:25,487 Compiling clap v4.4.15 2024-01-11T22:09:25,971 Compiling bio-types v1.0.1 2024-01-11T22:09:27,085 Compiling nalgebra v0.29.0 2024-01-11T22:09:36,476 Compiling idna v0.5.0 2024-01-11T22:09:39,743 Compiling flate2 v1.0.28 2024-01-11T22:09:52,549 Compiling derive_builder_core v0.12.0 2024-01-11T22:10:04,436 Compiling spin v0.9.8 2024-01-11T22:10:06,105 Compiling enum-map-derive v0.17.0 2024-01-11T22:10:07,780 Compiling csv-core v0.1.11 2024-01-11T22:10:11,668 Compiling nanorand v0.7.0 2024-01-11T22:10:12,159 Compiling num_cpus v1.16.0 2024-01-11T22:10:14,404 Compiling memoffset v0.9.0 2024-01-11T22:10:15,880 Compiling custom_derive v0.1.7 2024-01-11T22:10:16,066 Compiling termcolor v1.4.1 2024-01-11T22:10:20,700 Compiling fixedbitset v0.4.2 2024-01-11T22:10:21,708 Compiling humantime v2.1.0 2024-01-11T22:10:23,727 Compiling futures-sink v0.3.30 2024-01-11T22:10:24,005 Compiling unicode-width v0.1.11 2024-01-11T22:10:24,391 Compiling smallvec v1.11.2 2024-01-11T22:10:25,268 Compiling bit-vec v0.6.3 2024-01-11T22:10:26,552 Compiling futures-core v0.3.30 2024-01-11T22:10:27,151 Compiling log v0.4.20 2024-01-11T22:10:27,227 Compiling flume v0.10.14 2024-01-11T22:10:29,730 Compiling bit-set v0.5.3 2024-01-11T22:10:30,884 Compiling console v0.15.8 2024-01-11T22:10:34,015 Compiling petgraph v0.6.4 2024-01-11T22:10:47,353 Compiling core_affinity v0.8.1 2024-01-11T22:10:48,122 Compiling enum-map v2.7.3 2024-01-11T22:10:49,277 Compiling csv v1.3.0 2024-01-11T22:10:59,850 Compiling derive_builder_macro v0.12.0 2024-01-11T22:11:04,465 Compiling rayon v1.8.0 2024-01-11T22:11:08,162 Compiling getset v0.1.2 2024-01-11T22:11:09,474 Compiling statrs v0.16.0 2024-01-11T22:11:15,718 Compiling url v2.5.0 2024-01-11T22:11:42,720 Compiling fxhash v0.2.1 2024-01-11T22:11:43,351 Compiling ndarray v0.15.6 2024-01-11T22:11:47,031 Compiling itertools v0.11.0 2024-01-11T22:12:04,234 Compiling pyo3 v0.19.2 2024-01-11T22:12:06,095 Compiling vec_map v0.8.2 2024-01-11T22:12:07,643 Compiling multimap v0.9.1 2024-01-11T22:12:09,012 Compiling pyo3-macros-backend v0.19.2 2024-01-11T22:12:10,445 Compiling ordered-float v3.9.2 2024-01-11T22:12:15,055 Compiling itertools-num v0.1.3 2024-01-11T22:12:15,432 Compiling atty v0.2.14 2024-01-11T22:12:15,720 Compiling fastrand v2.0.1 2024-01-11T22:12:18,266 Compiling editdistancek v1.0.2 2024-01-11T22:12:19,300 Compiling bytes v1.5.0 2024-01-11T22:12:27,584 Compiling ieee754 v0.2.6 2024-01-11T22:12:28,260 Compiling number_prefix v0.4.0 2024-01-11T22:12:28,924 Compiling roff v0.2.1 2024-01-11T22:12:32,755 Compiling bytecount v0.6.7 2024-01-11T22:12:33,638 Compiling strum v0.25.0 2024-01-11T22:12:33,937 Compiling fibertools-rs v0.3.7 (/tmp/pip-wheel-85fqiyva/pyft_40512a235c8244979978a289ee13d8cf) 2024-01-11T22:12:34,185 Compiling linear-map v1.2.0 2024-01-11T22:12:35,989 Compiling unsafe-libyaml v0.2.10 2024-01-11T22:12:35,997 Compiling triple_accel v0.4.0 2024-01-11T22:12:44,888 Compiling serde_yaml v0.9.30 2024-01-11T22:12:45,944 Compiling pyo3-macros v0.19.2 2024-01-11T22:12:51,893 Compiling bio v1.5.0 2024-01-11T22:13:04,291 Compiling clap_mangen v0.2.17 2024-01-11T22:13:18,506 Compiling indicatif v0.17.7 2024-01-11T22:13:30,375 Compiling tempfile v3.9.0 2024-01-11T22:13:39,370 Compiling env_logger v0.9.3 2024-01-11T22:13:51,586 Compiling gbdt v0.1.2 2024-01-11T22:14:00,806 Compiling derive_builder v0.12.0 2024-01-11T22:14:01,329 Compiling parking_lot v0.12.1 2024-01-11T22:14:10,085 Compiling niffler v2.5.0 2024-01-11T22:14:28,730 Compiling clap_complete v4.4.6 2024-01-11T22:14:47,278 Compiling itertools v0.10.5 2024-01-11T22:15:03,160 Compiling colored v2.1.0 2024-01-11T22:15:04,037 Compiling is-terminal v0.4.10 2024-01-11T22:15:04,282 Compiling indoc v1.0.9 2024-01-11T22:15:09,855 Compiling unindent v0.1.11 2024-01-11T22:15:11,943 Compiling env_logger v0.10.1 2024-01-11T22:15:53,700 Compiling libdeflater v0.12.0 2024-01-11T22:15:54,720 Compiling gzp v0.11.3 2024-01-11T22:18:19,147 Compiling rust-htslib v0.43.1 2024-01-11T22:18:20,934 error[E0308]: mismatched types 2024-01-11T22:18:20,934 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/record.rs:154:16 2024-01-11T22:18:20,935 | 2024-01-11T22:18:20,935 154 | l: sam_copy.len() as u64, 2024-01-11T22:18:20,935 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2024-01-11T22:18:20,943 error[E0308]: mismatched types 2024-01-11T22:18:20,943 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/record.rs:155:16 2024-01-11T22:18:20,943 | 2024-01-11T22:18:20,943 155 | m: sam_copy.len() as u64, 2024-01-11T22:18:20,944 | ^^^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2024-01-11T22:18:21,467 error[E0308]: mismatched types 2024-01-11T22:18:21,468 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/mod.rs:1128:29 2024-01-11T22:18:21,468 | 2024-01-11T22:18:21,468 1128 | (*rec).l_text = l_text as u64; 2024-01-11T22:18:21,468 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2024-01-11T22:18:21,469 | | 2024-01-11T22:18:21,469 | expected due to the type of this binding 2024-01-11T22:18:21,512 error[E0308]: mismatched types 2024-01-11T22:18:21,512 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/mod.rs:1393:45 2024-01-11T22:18:21,512 | 2024-01-11T22:18:21,512 1393 | let rec = htslib::sam_hdr_parse((l_text + 1) as u64, text as *const c_char); 2024-01-11T22:18:21,512 | --------------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2024-01-11T22:18:21,513 | | 2024-01-11T22:18:21,513 | arguments to this function are incorrect 2024-01-11T22:18:21,513 | 2024-01-11T22:18:21,513 note: function defined here 2024-01-11T22:18:21,513 --> /tmp/pip-wheel-85fqiyva/pyft_40512a235c8244979978a289ee13d8cf/py-ft/target/release/build/hts-sys-3cad9f14c7e3bfea/out/bindings.rs:8520:12 2024-01-11T22:18:21,513 | 2024-01-11T22:18:21,513 8520 | pub fn sam_hdr_parse(l_text: size_t, text: *const ::std::os::raw::c_char) -> *mut sam_hdr_t; 2024-01-11T22:18:21,513 | ^^^^^^^^^^^^^ 2024-01-11T22:18:21,514 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2024-01-11T22:18:21,514 | 2024-01-11T22:18:21,514 1393 | let rec = htslib::sam_hdr_parse(((l_text + 1) as u64).try_into().unwrap(), text as *const c_char); 2024-01-11T22:18:21,514 | + +++++++++++++++++++++ 2024-01-11T22:18:21,519 error[E0308]: mismatched types 2024-01-11T22:18:21,520 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bam/mod.rs:1395:29 2024-01-11T22:18:21,520 | 2024-01-11T22:18:21,520 1395 | (*rec).l_text = l_text as u64; 2024-01-11T22:18:21,520 | ------------- ^^^^^^^^^^^^^ expected `u32`, found `u64` 2024-01-11T22:18:21,520 | | 2024-01-11T22:18:21,521 | expected due to the type of this binding 2024-01-11T22:18:21,758 error[E0308]: mismatched types 2024-01-11T22:18:21,758 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bcf/record.rs:1011:48 2024-01-11T22:18:21,759 | 2024-01-11T22:18:21,759 1011 | let rm_set = unsafe { htslib::kbs_init(remove.len() as u64) }; 2024-01-11T22:18:21,759 | ---------------- ^^^^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2024-01-11T22:18:21,759 | | 2024-01-11T22:18:21,760 | arguments to this function are incorrect 2024-01-11T22:18:21,760 | 2024-01-11T22:18:21,760 note: function defined here 2024-01-11T22:18:21,760 --> /tmp/pip-wheel-85fqiyva/pyft_40512a235c8244979978a289ee13d8cf/py-ft/target/release/build/hts-sys-3cad9f14c7e3bfea/out/bindings.rs:11642:12 2024-01-11T22:18:21,761 | 2024-01-11T22:18:21,761 11642 | pub fn kbs_init(ni: size_t) -> *mut kbitset_t; 2024-01-11T22:18:21,761 | ^^^^^^^^ 2024-01-11T22:18:21,761 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2024-01-11T22:18:21,761 | 2024-01-11T22:18:21,761 1011 | let rm_set = unsafe { htslib::kbs_init((remove.len() as u64).try_into().unwrap()) }; 2024-01-11T22:18:21,762 | + +++++++++++++++++++++ 2024-01-11T22:18:21,984 error[E0308]: mismatched types 2024-01-11T22:18:21,984 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bgzf/mod.rs:118:17 2024-01-11T22:18:21,984 | 2024-01-11T22:18:21,984 115 | htslib::bgzf_read( 2024-01-11T22:18:21,985 | ----------------- arguments to this function are incorrect 2024-01-11T22:18:21,985 ... 2024-01-11T22:18:21,985 118 | buf.len() as u64, 2024-01-11T22:18:21,985 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2024-01-11T22:18:21,985 | 2024-01-11T22:18:21,985 note: function defined here 2024-01-11T22:18:21,986 --> /tmp/pip-wheel-85fqiyva/pyft_40512a235c8244979978a289ee13d8cf/py-ft/target/release/build/hts-sys-3cad9f14c7e3bfea/out/bindings.rs:10097:12 2024-01-11T22:18:21,986 | 2024-01-11T22:18:21,986 10097 | pub fn bgzf_read(fp: *mut BGZF, data: *mut ::std::os::raw::c_void, length: size_t) -> ssize_t; 2024-01-11T22:18:21,986 | ^^^^^^^^^ 2024-01-11T22:18:21,986 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2024-01-11T22:18:21,986 | 2024-01-11T22:18:21,987 118 | (buf.len() as u64).try_into().unwrap(), 2024-01-11T22:18:21,987 | + +++++++++++++++++++++ 2024-01-11T22:18:22,012 error[E0308]: mismatched types 2024-01-11T22:18:22,012 --> /home/piwheels/.cargo/registry/src/index.crates.io-1cd66030c949c28d/rust-htslib-0.43.1/src/bgzf/mod.rs:264:17 2024-01-11T22:18:22,012 | 2024-01-11T22:18:22,013 261 | htslib::bgzf_write( 2024-01-11T22:18:22,013 | ------------------ arguments to this function are incorrect 2024-01-11T22:18:22,013 ... 2024-01-11T22:18:22,013 264 | buf.len() as u64, 2024-01-11T22:18:22,013 | ^^^^^^^^^^^^^^^^ expected `u32`, found `u64` 2024-01-11T22:18:22,013 | 2024-01-11T22:18:22,013 note: function defined here 2024-01-11T22:18:22,014 --> /tmp/pip-wheel-85fqiyva/pyft_40512a235c8244979978a289ee13d8cf/py-ft/target/release/build/hts-sys-3cad9f14c7e3bfea/out/bindings.rs:10100:12 2024-01-11T22:18:22,014 | 2024-01-11T22:18:22,014 10100 | pub fn bgzf_write( 2024-01-11T22:18:22,014 | ^^^^^^^^^^ 2024-01-11T22:18:22,014 help: you can convert a `u64` to a `u32` and panic if the converted value doesn't fit 2024-01-11T22:18:22,014 | 2024-01-11T22:18:22,015 264 | (buf.len() as u64).try_into().unwrap(), 2024-01-11T22:18:22,015 | + +++++++++++++++++++++ 2024-01-11T22:18:22,184 For more information about this error, try `rustc --explain E0308`. 2024-01-11T22:18:22,200 error: could not compile `rust-htslib` (lib) due to 8 previous errors 2024-01-11T22:18:22,226 💥 maturin failed 2024-01-11T22:18:22,226 Caused by: Failed to build a native library through cargo 2024-01-11T22:18:22,227 Caused by: Cargo build finished with "exit status: 101": `env -u CARGO PYO3_ENVIRONMENT_SIGNATURE="cpython-3.9-64bit" PYO3_PYTHON="/usr/bin/python3" PYTHON_SYS_EXECUTABLE="/usr/bin/python3" "cargo" "rustc" "--features" "pyo3/extension-module" "--message-format" "json-render-diagnostics" "--manifest-path" "/tmp/pip-wheel-85fqiyva/pyft_40512a235c8244979978a289ee13d8cf/py-ft/Cargo.toml" "--release" "--lib"` 2024-01-11T22:18:22,228 Error: command ['maturin', 'pep517', 'build-wheel', '-i', '/usr/bin/python3', '--compatibility', 'off'] returned non-zero exit status 1 2024-01-11T22:18:22,249 ERROR: Building wheel for pyft (pyproject.toml) exited with 1 2024-01-11T22:18:22,266 [bold magenta]full command[/]: [blue]/usr/bin/python3 /home/piwheels/.local/lib/python3.9/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmp7x6b8xud[/] 2024-01-11T22:18:22,266 [bold magenta]cwd[/]: /tmp/pip-wheel-85fqiyva/pyft_40512a235c8244979978a289ee13d8cf 2024-01-11T22:18:22,267 Building wheel for pyft (pyproject.toml): finished with status 'error' 2024-01-11T22:18:22,269 ERROR: Failed building wheel for pyft 2024-01-11T22:18:22,272 Failed to build pyft 2024-01-11T22:18:22,273 ERROR: Failed to build one or more wheels 2024-01-11T22:18:22,274 Exception information: 2024-01-11T22:18:22,274 Traceback (most recent call last): 2024-01-11T22:18:22,274 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2024-01-11T22:18:22,274 status = run_func(*args) 2024-01-11T22:18:22,274 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 245, in wrapper 2024-01-11T22:18:22,274 return func(self, options, args) 2024-01-11T22:18:22,274 File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 181, in run 2024-01-11T22:18:22,274 raise CommandError("Failed to build one or more wheels") 2024-01-11T22:18:22,274 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2024-01-11T22:18:22,277 Removed build tracker: '/tmp/pip-build-tracker-smnkpy37'