2024-01-11T23:05:57,329 Created temporary directory: /tmp/pip-build-tracker-_2y15nts 2024-01-11T23:05:57,330 Initialized build tracking at /tmp/pip-build-tracker-_2y15nts 2024-01-11T23:05:57,331 Created build tracker: /tmp/pip-build-tracker-_2y15nts 2024-01-11T23:05:57,340 Entered build tracker: /tmp/pip-build-tracker-_2y15nts 2024-01-11T23:05:57,341 Created temporary directory: /tmp/pip-wheel-4zlt7fmm 2024-01-11T23:05:57,345 Created temporary directory: /tmp/pip-ephem-wheel-cache-rm9j8n5c 2024-01-11T23:05:57,375 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-11T23:05:57,379 2 location(s) to search for versions of witch-msa: 2024-01-11T23:05:57,379 * https://pypi.org/simple/witch-msa/ 2024-01-11T23:05:57,379 * https://www.piwheels.org/simple/witch-msa/ 2024-01-11T23:05:57,380 Fetching project page and analyzing links: https://pypi.org/simple/witch-msa/ 2024-01-11T23:05:57,380 Getting page https://pypi.org/simple/witch-msa/ 2024-01-11T23:05:57,382 Found index url https://pypi.org/simple/ 2024-01-11T23:05:57,602 Fetched page https://pypi.org/simple/witch-msa/ as application/vnd.pypi.simple.v1+json 2024-01-11T23:05:57,606 Found link https://files.pythonhosted.org/packages/9f/57/80dd0c29162c6b84cd017182095b5cb2aa4dc11260bbae056f3ef0351943/witch-msa-1.0.0rc1.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.0rc1 2024-01-11T23:05:57,607 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/43/78/272d4d835763bc77476391081248647987723a7b0226719cd93618a44b8a/witch_msa-1.0.0rc1-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:57,609 Found link https://files.pythonhosted.org/packages/04/42/abe66ef86387d93b5b0bc9f23ec71b3660310d62820b56cb6315b13db266/witch-msa-1.0.0rc3.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.0rc3 2024-01-11T23:05:57,609 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/d5/e8/f939cdd95425dcd48632cc7a2fdaa939beabfed6d2004dff600c8afc0be1/witch_msa-1.0.0rc3-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:57,610 Found link https://files.pythonhosted.org/packages/18/10/e568ef8fa1a5a231130cc83c420b1bed9bf69ceaf17911f5b45f67496b39/witch-msa-1.0.0rc4.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.0rc4 2024-01-11T23:05:57,611 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/de/20/c1d8c0f03fe35ea092495a73a29d3bca6a94ea55ea917d04b73cc7582215/witch_msa-1.0.0rc4-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:57,612 Found link https://files.pythonhosted.org/packages/19/e6/150568e28ab0565dd78080eba70d4d2254038ef55327b82919e5915c6101/witch-msa-1.0.1.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.1 2024-01-11T23:05:57,613 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/6a/bf/e791b97aa9ff2e5592b40328ac11461a5dae4ecd40e175d1349be75cf37a/witch_msa-1.0.1-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:57,614 Found link https://files.pythonhosted.org/packages/c6/81/4a0953d4b062ea116c7e89fbeb65f537958b489d02bee8263b6044d3aeb5/witch-msa-1.0.2a1.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.2a1 2024-01-11T23:05:57,615 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/ac/96/5021e8835aef45c1a4f6b35c072002d7b7fd870cb4fe75f87b71b5d163b2/witch_msa-1.0.2a1-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:57,616 Found link https://files.pythonhosted.org/packages/64/5e/5c1c155504577b54c69c77cab4f13b188e09352f4e1f6bdee2cd24fdc79b/witch-msa-1.0.2.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.2 2024-01-11T23:05:57,617 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/20/8a/6d9b66587c199643ee2fa476eca10667d34c5f1b98f0f50a1b67a255d245/witch_msa-1.0.2-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:57,619 Found link https://files.pythonhosted.org/packages/f5/84/70bab77fd75eeb0c8557e2495155d0a39827d2289982ef06f3402e08ef13/witch-msa-1.0.3.tar.gz (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7), version: 1.0.3 2024-01-11T23:05:57,619 Skipping link: No binaries permitted for witch-msa: https://files.pythonhosted.org/packages/7d/49/5e72750b8258bae5aa24b17b926270da899830bb2b6e8372c1b1e86d36af/witch_msa-1.0.3-py3-none-any.whl (from https://pypi.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:57,620 Fetching project page and analyzing links: https://www.piwheels.org/simple/witch-msa/ 2024-01-11T23:05:57,621 Getting page https://www.piwheels.org/simple/witch-msa/ 2024-01-11T23:05:57,622 Found index url https://www.piwheels.org/simple/ 2024-01-11T23:05:58,036 Fetched page https://www.piwheels.org/simple/witch-msa/ as text/html 2024-01-11T23:05:58,050 Skipping link: No binaries permitted for witch-msa: https://www.piwheels.org/simple/witch-msa/witch_msa-1.0.2-py3-none-any.whl#sha256=6c112c92ccb048e378cb6201a41fe7025037418782b80ea7b41046fac80fb81c (from https://www.piwheels.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:58,050 Skipping link: No binaries permitted for witch-msa: https://www.piwheels.org/simple/witch-msa/witch_msa-1.0.2a1-py3-none-any.whl#sha256=4ba431635ab1cb66b533f39a613a0451577fdbf854dace83aad27dbac829afac (from https://www.piwheels.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:58,051 Skipping link: No binaries permitted for witch-msa: https://www.piwheels.org/simple/witch-msa/witch_msa-1.0.1-py3-none-any.whl#sha256=9a991d73586803bc132937a46dd0adf27f1c8b87b2e31d0a029497a7b20fd007 (from https://www.piwheels.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:58,075 Skipping link: No binaries permitted for witch-msa: https://www.piwheels.org/simple/witch-msa/witch_msa-1.0.0rc4-py3-none-any.whl#sha256=2c2a928f16f5a02983f953a35cc22dfab97abebe5984290e665cfb59e940d4e3 (from https://www.piwheels.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:58,077 Skipping link: No binaries permitted for witch-msa: https://www.piwheels.org/simple/witch-msa/witch_msa-1.0.0rc3-py3-none-any.whl#sha256=c99577c2a6e9a75c03f497d93f5f54ee9a04036357ca0b4cfb53f08df1f8023f (from https://www.piwheels.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:58,078 Skipping link: No binaries permitted for witch-msa: https://www.piwheels.org/simple/witch-msa/witch_msa-1.0.0rc1-py3-none-any.whl#sha256=7639b8df3d4a6b6fc2a4e2654e2da8d9636881239740deb58f44b604e93074d6 (from https://www.piwheels.org/simple/witch-msa/) (requires-python:>=3.7) 2024-01-11T23:05:58,083 Skipping link: not a file: https://www.piwheels.org/simple/witch-msa/ 2024-01-11T23:05:58,084 Skipping link: not a file: https://pypi.org/simple/witch-msa/ 2024-01-11T23:05:58,118 Given no hashes to check 1 links for project 'witch-msa': discarding no candidates 2024-01-11T23:05:58,179 Collecting witch-msa==1.0.3 2024-01-11T23:05:58,182 Created temporary directory: /tmp/pip-unpack-7hkc3vzb 2024-01-11T23:05:58,414 Downloading witch-msa-1.0.3.tar.gz (29.0 MB) 2024-01-11T23:06:06,354 Added witch-msa==1.0.3 from https://files.pythonhosted.org/packages/f5/84/70bab77fd75eeb0c8557e2495155d0a39827d2289982ef06f3402e08ef13/witch-msa-1.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-_2y15nts' 2024-01-11T23:06:06,358 Created temporary directory: /tmp/pip-build-env-rhkuep5t 2024-01-11T23:06:06,363 Installing build dependencies: started 2024-01-11T23:06:06,364 Running command pip subprocess to install build dependencies 2024-01-11T23:06:07,638 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-01-11T23:06:08,209 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-11T23:06:09,630 Collecting setuptools 2024-01-11T23:06:09,645 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl (819 kB) 2024-01-11T23:06:12,237 Installing collected packages: setuptools 2024-01-11T23:06:14,571 Successfully installed setuptools-69.0.3 2024-01-11T23:06:14,846 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-11T23:06:14,847 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-11T23:06:15,106 Installing build dependencies: finished with status 'done' 2024-01-11T23:06:15,110 Getting requirements to build wheel: started 2024-01-11T23:06:15,111 Running command Getting requirements to build wheel 2024-01-11T23:06:15,889 running egg_info 2024-01-11T23:06:15,892 writing witch_msa.egg-info/PKG-INFO 2024-01-11T23:06:15,897 writing dependency_links to witch_msa.egg-info/dependency_links.txt 2024-01-11T23:06:15,899 writing requirements to witch_msa.egg-info/requires.txt 2024-01-11T23:06:15,901 writing top-level names to witch_msa.egg-info/top_level.txt 2024-01-11T23:06:15,921 reading manifest file 'witch_msa.egg-info/SOURCES.txt' 2024-01-11T23:06:15,944 reading manifest template 'MANIFEST.in' 2024-01-11T23:06:15,963 no previously-included directories found matching '*/__pycache__' 2024-01-11T23:06:15,964 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2024-01-11T23:06:15,965 adding license file 'LICENSE' 2024-01-11T23:06:15,973 writing manifest file 'witch_msa.egg-info/SOURCES.txt' 2024-01-11T23:06:16,083 Getting requirements to build wheel: finished with status 'done' 2024-01-11T23:06:16,092 Installing backend dependencies: started 2024-01-11T23:06:16,093 Running command pip subprocess to install backend dependencies 2024-01-11T23:06:17,262 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-01-11T23:06:17,807 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-11T23:06:18,303 Collecting wheel 2024-01-11T23:06:18,318 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-01-11T23:06:20,554 Installing collected packages: wheel 2024-01-11T23:06:20,786 Creating /tmp/pip-build-env-rhkuep5t/normal/local/bin 2024-01-11T23:06:20,788 changing mode of /tmp/pip-build-env-rhkuep5t/normal/local/bin/wheel to 755 2024-01-11T23:06:20,800 Successfully installed wheel-0.42.0 2024-01-11T23:06:21,074 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-11T23:06:21,075 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-11T23:06:21,301 Installing backend dependencies: finished with status 'done' 2024-01-11T23:06:21,302 Created temporary directory: /tmp/pip-modern-metadata-nv4gblbs 2024-01-11T23:06:21,305 Preparing metadata (pyproject.toml): started 2024-01-11T23:06:21,306 Running command Preparing metadata (pyproject.toml) 2024-01-11T23:06:22,169 running dist_info 2024-01-11T23:06:22,174 creating /tmp/pip-modern-metadata-nv4gblbs/witch_msa.egg-info 2024-01-11T23:06:22,177 writing /tmp/pip-modern-metadata-nv4gblbs/witch_msa.egg-info/PKG-INFO 2024-01-11T23:06:22,182 writing dependency_links to /tmp/pip-modern-metadata-nv4gblbs/witch_msa.egg-info/dependency_links.txt 2024-01-11T23:06:22,184 writing requirements to /tmp/pip-modern-metadata-nv4gblbs/witch_msa.egg-info/requires.txt 2024-01-11T23:06:22,186 writing top-level names to /tmp/pip-modern-metadata-nv4gblbs/witch_msa.egg-info/top_level.txt 2024-01-11T23:06:22,187 writing manifest file '/tmp/pip-modern-metadata-nv4gblbs/witch_msa.egg-info/SOURCES.txt' 2024-01-11T23:06:22,209 reading manifest file '/tmp/pip-modern-metadata-nv4gblbs/witch_msa.egg-info/SOURCES.txt' 2024-01-11T23:06:22,212 reading manifest template 'MANIFEST.in' 2024-01-11T23:06:22,244 no previously-included directories found matching '*/__pycache__' 2024-01-11T23:06:22,245 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2024-01-11T23:06:22,246 adding license file 'LICENSE' 2024-01-11T23:06:22,252 writing manifest file '/tmp/pip-modern-metadata-nv4gblbs/witch_msa.egg-info/SOURCES.txt' 2024-01-11T23:06:22,253 creating '/tmp/pip-modern-metadata-nv4gblbs/witch_msa-1.0.3.dist-info' 2024-01-11T23:06:22,410 Preparing metadata (pyproject.toml): finished with status 'done' 2024-01-11T23:06:22,423 Source in /tmp/pip-wheel-4zlt7fmm/witch-msa_c98fba938c984665b51eebcd2996aa1e has version 1.0.3, which satisfies requirement witch-msa==1.0.3 from https://files.pythonhosted.org/packages/f5/84/70bab77fd75eeb0c8557e2495155d0a39827d2289982ef06f3402e08ef13/witch-msa-1.0.3.tar.gz 2024-01-11T23:06:22,424 Removed witch-msa==1.0.3 from https://files.pythonhosted.org/packages/f5/84/70bab77fd75eeb0c8557e2495155d0a39827d2289982ef06f3402e08ef13/witch-msa-1.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-_2y15nts' 2024-01-11T23:06:22,444 Created temporary directory: /tmp/pip-unpack-iczdo78r 2024-01-11T23:06:22,445 Created temporary directory: /tmp/pip-unpack-2q8mj6sc 2024-01-11T23:06:22,473 Building wheels for collected packages: witch-msa 2024-01-11T23:06:22,478 Created temporary directory: /tmp/pip-wheel-oqcy2j2i 2024-01-11T23:06:22,478 Destination directory: /tmp/pip-wheel-oqcy2j2i 2024-01-11T23:06:22,481 Building wheel for witch-msa (pyproject.toml): started 2024-01-11T23:06:22,482 Running command Building wheel for witch-msa (pyproject.toml) 2024-01-11T23:06:23,252 running bdist_wheel 2024-01-11T23:06:23,268 running build 2024-01-11T23:06:23,269 running build_py 2024-01-11T23:06:23,273 creating build 2024-01-11T23:06:23,274 creating build/lib 2024-01-11T23:06:23,275 creating build/lib/witch_msa 2024-01-11T23:06:23,276 copying witch_msa/configs.py -> build/lib/witch_msa 2024-01-11T23:06:23,279 copying witch_msa/__init__.py -> build/lib/witch_msa 2024-01-11T23:06:23,281 copying witch_msa/init_configs.py -> build/lib/witch_msa 2024-01-11T23:06:23,284 creating build/lib/witch_msa/gcmm 2024-01-11T23:06:23,285 copying witch_msa/gcmm/callback.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,287 copying witch_msa/gcmm/merger.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,289 copying witch_msa/gcmm/tree.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,291 copying witch_msa/gcmm/aligner.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,294 copying witch_msa/gcmm/algorithm.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,297 copying witch_msa/gcmm/loader.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,299 copying witch_msa/gcmm/weighting.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,301 copying witch_msa/gcmm/task.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,303 copying witch_msa/gcmm/decompose_tree.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,305 copying witch_msa/gcmm/gcmm.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,308 copying witch_msa/gcmm/results_handler.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,310 copying witch_msa/gcmm/__init__.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,312 copying witch_msa/gcmm/backbone.py -> build/lib/witch_msa/gcmm 2024-01-11T23:06:23,315 creating build/lib/witch_msa/helpers 2024-01-11T23:06:23,316 copying witch_msa/helpers/general_tools.py -> build/lib/witch_msa/helpers 2024-01-11T23:06:23,318 copying witch_msa/helpers/pyhmmer_tools.py -> build/lib/witch_msa/helpers 2024-01-11T23:06:23,320 copying witch_msa/helpers/alignment_tools.py -> build/lib/witch_msa/helpers 2024-01-11T23:06:23,324 copying witch_msa/helpers/math_utils.py -> build/lib/witch_msa/helpers 2024-01-11T23:06:23,326 copying witch_msa/helpers/__init__.py -> build/lib/witch_msa/helpers 2024-01-11T23:06:23,327 running egg_info 2024-01-11T23:06:23,330 writing witch_msa.egg-info/PKG-INFO 2024-01-11T23:06:23,335 writing dependency_links to witch_msa.egg-info/dependency_links.txt 2024-01-11T23:06:23,337 writing requirements to witch_msa.egg-info/requires.txt 2024-01-11T23:06:23,337 writing top-level names to witch_msa.egg-info/top_level.txt 2024-01-11T23:06:23,348 reading manifest file 'witch_msa.egg-info/SOURCES.txt' 2024-01-11T23:06:23,352 reading manifest template 'MANIFEST.in' 2024-01-11T23:06:23,367 no previously-included directories found matching '*/__pycache__' 2024-01-11T23:06:23,368 warning: no previously-included files matching '*.py[cod]' found anywhere in distribution 2024-01-11T23:06:23,368 adding license file 'LICENSE' 2024-01-11T23:06:23,376 writing manifest file 'witch_msa.egg-info/SOURCES.txt' 2024-01-11T23:06:23,379 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.macOS' is absent from the `packages` configuration. 2024-01-11T23:06:23,380 !! 2024-01-11T23:06:23,381 ******************************************************************************** 2024-01-11T23:06:23,381 ############################ 2024-01-11T23:06:23,382 # Package would be ignored # 2024-01-11T23:06:23,382 ############################ 2024-01-11T23:06:23,383 Python recognizes 'witch_msa.tools.macOS' as an importable package[^1], 2024-01-11T23:06:23,383 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,384 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,384 package, please make sure that 'witch_msa.tools.macOS' is explicitly added 2024-01-11T23:06:23,385 to the `packages` configuration field. 2024-01-11T23:06:23,386 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,386 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,387 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,388 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,389 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,390 If you don't want 'witch_msa.tools.macOS' to be distributed and are 2024-01-11T23:06:23,391 already explicitly excluding 'witch_msa.tools.macOS' via 2024-01-11T23:06:23,392 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,392 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,393 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,394 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,395 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,397 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,398 even if it does not contain any `.py` files. 2024-01-11T23:06:23,398 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,399 directory, all directories are treated like packages. 2024-01-11T23:06:23,399 ******************************************************************************** 2024-01-11T23:06:23,400 !! 2024-01-11T23:06:23,401 check.warn(importable) 2024-01-11T23:06:23,401 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus' is absent from the `packages` configuration. 2024-01-11T23:06:23,402 !! 2024-01-11T23:06:23,403 ******************************************************************************** 2024-01-11T23:06:23,403 ############################ 2024-01-11T23:06:23,404 # Package would be ignored # 2024-01-11T23:06:23,405 ############################ 2024-01-11T23:06:23,405 Python recognizes 'witch_msa.tools.magus' as an importable package[^1], 2024-01-11T23:06:23,406 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,407 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,408 package, please make sure that 'witch_msa.tools.magus' is explicitly added 2024-01-11T23:06:23,408 to the `packages` configuration field. 2024-01-11T23:06:23,409 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,409 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,410 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,410 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,411 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,412 If you don't want 'witch_msa.tools.magus' to be distributed and are 2024-01-11T23:06:23,413 already explicitly excluding 'witch_msa.tools.magus' via 2024-01-11T23:06:23,413 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,414 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,414 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,415 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,416 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,417 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,418 even if it does not contain any `.py` files. 2024-01-11T23:06:23,418 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,419 directory, all directories are treated like packages. 2024-01-11T23:06:23,419 ******************************************************************************** 2024-01-11T23:06:23,420 !! 2024-01-11T23:06:23,421 check.warn(importable) 2024-01-11T23:06:23,424 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.align' is absent from the `packages` configuration. 2024-01-11T23:06:23,425 !! 2024-01-11T23:06:23,426 ******************************************************************************** 2024-01-11T23:06:23,427 ############################ 2024-01-11T23:06:23,427 # Package would be ignored # 2024-01-11T23:06:23,428 ############################ 2024-01-11T23:06:23,431 Python recognizes 'witch_msa.tools.magus.align' as an importable package[^1], 2024-01-11T23:06:23,431 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,436 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,438 package, please make sure that 'witch_msa.tools.magus.align' is explicitly added 2024-01-11T23:06:23,440 to the `packages` configuration field. 2024-01-11T23:06:23,441 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,442 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,442 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,444 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,445 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,449 If you don't want 'witch_msa.tools.magus.align' to be distributed and are 2024-01-11T23:06:23,454 already explicitly excluding 'witch_msa.tools.magus.align' via 2024-01-11T23:06:23,455 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,456 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,457 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,461 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,462 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,463 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,463 even if it does not contain any `.py` files. 2024-01-11T23:06:23,464 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,465 directory, all directories are treated like packages. 2024-01-11T23:06:23,471 ******************************************************************************** 2024-01-11T23:06:23,475 !! 2024-01-11T23:06:23,476 check.warn(importable) 2024-01-11T23:06:23,476 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.align.decompose' is absent from the `packages` configuration. 2024-01-11T23:06:23,476 !! 2024-01-11T23:06:23,477 ******************************************************************************** 2024-01-11T23:06:23,478 ############################ 2024-01-11T23:06:23,478 # Package would be ignored # 2024-01-11T23:06:23,479 ############################ 2024-01-11T23:06:23,480 Python recognizes 'witch_msa.tools.magus.align.decompose' as an importable package[^1], 2024-01-11T23:06:23,480 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,481 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,482 package, please make sure that 'witch_msa.tools.magus.align.decompose' is explicitly added 2024-01-11T23:06:23,482 to the `packages` configuration field. 2024-01-11T23:06:23,483 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,484 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,485 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,488 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,490 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,491 If you don't want 'witch_msa.tools.magus.align.decompose' to be distributed and are 2024-01-11T23:06:23,492 already explicitly excluding 'witch_msa.tools.magus.align.decompose' via 2024-01-11T23:06:23,492 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,493 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,494 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,495 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,496 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,498 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,498 even if it does not contain any `.py` files. 2024-01-11T23:06:23,499 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,500 directory, all directories are treated like packages. 2024-01-11T23:06:23,501 ******************************************************************************** 2024-01-11T23:06:23,503 !! 2024-01-11T23:06:23,504 check.warn(importable) 2024-01-11T23:06:23,504 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.align.merge' is absent from the `packages` configuration. 2024-01-11T23:06:23,505 !! 2024-01-11T23:06:23,507 ******************************************************************************** 2024-01-11T23:06:23,508 ############################ 2024-01-11T23:06:23,509 # Package would be ignored # 2024-01-11T23:06:23,510 ############################ 2024-01-11T23:06:23,510 Python recognizes 'witch_msa.tools.magus.align.merge' as an importable package[^1], 2024-01-11T23:06:23,511 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,512 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,512 package, please make sure that 'witch_msa.tools.magus.align.merge' is explicitly added 2024-01-11T23:06:23,513 to the `packages` configuration field. 2024-01-11T23:06:23,514 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,515 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,516 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,517 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,518 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,519 If you don't want 'witch_msa.tools.magus.align.merge' to be distributed and are 2024-01-11T23:06:23,520 already explicitly excluding 'witch_msa.tools.magus.align.merge' via 2024-01-11T23:06:23,521 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,522 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,523 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,524 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,525 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,527 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,528 even if it does not contain any `.py` files. 2024-01-11T23:06:23,528 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,529 directory, all directories are treated like packages. 2024-01-11T23:06:23,529 ******************************************************************************** 2024-01-11T23:06:23,530 !! 2024-01-11T23:06:23,531 check.warn(importable) 2024-01-11T23:06:23,532 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.align.merge.graph_build' is absent from the `packages` configuration. 2024-01-11T23:06:23,532 !! 2024-01-11T23:06:23,533 ******************************************************************************** 2024-01-11T23:06:23,534 ############################ 2024-01-11T23:06:23,535 # Package would be ignored # 2024-01-11T23:06:23,535 ############################ 2024-01-11T23:06:23,536 Python recognizes 'witch_msa.tools.magus.align.merge.graph_build' as an importable package[^1], 2024-01-11T23:06:23,537 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,538 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,538 package, please make sure that 'witch_msa.tools.magus.align.merge.graph_build' is explicitly added 2024-01-11T23:06:23,539 to the `packages` configuration field. 2024-01-11T23:06:23,541 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,542 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,542 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,543 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,545 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,545 If you don't want 'witch_msa.tools.magus.align.merge.graph_build' to be distributed and are 2024-01-11T23:06:23,546 already explicitly excluding 'witch_msa.tools.magus.align.merge.graph_build' via 2024-01-11T23:06:23,546 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,547 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,547 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,548 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,549 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,551 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,551 even if it does not contain any `.py` files. 2024-01-11T23:06:23,552 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,552 directory, all directories are treated like packages. 2024-01-11T23:06:23,553 ******************************************************************************** 2024-01-11T23:06:23,554 !! 2024-01-11T23:06:23,554 check.warn(importable) 2024-01-11T23:06:23,555 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.align.merge.graph_cluster' is absent from the `packages` configuration. 2024-01-11T23:06:23,555 !! 2024-01-11T23:06:23,556 ******************************************************************************** 2024-01-11T23:06:23,557 ############################ 2024-01-11T23:06:23,558 # Package would be ignored # 2024-01-11T23:06:23,558 ############################ 2024-01-11T23:06:23,559 Python recognizes 'witch_msa.tools.magus.align.merge.graph_cluster' as an importable package[^1], 2024-01-11T23:06:23,559 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,560 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,561 package, please make sure that 'witch_msa.tools.magus.align.merge.graph_cluster' is explicitly added 2024-01-11T23:06:23,561 to the `packages` configuration field. 2024-01-11T23:06:23,563 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,563 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,564 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,565 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,566 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,567 If you don't want 'witch_msa.tools.magus.align.merge.graph_cluster' to be distributed and are 2024-01-11T23:06:23,568 already explicitly excluding 'witch_msa.tools.magus.align.merge.graph_cluster' via 2024-01-11T23:06:23,568 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,569 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,569 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,571 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,572 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,574 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,574 even if it does not contain any `.py` files. 2024-01-11T23:06:23,575 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,576 directory, all directories are treated like packages. 2024-01-11T23:06:23,576 ******************************************************************************** 2024-01-11T23:06:23,577 !! 2024-01-11T23:06:23,578 check.warn(importable) 2024-01-11T23:06:23,578 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.align.merge.graph_trace' is absent from the `packages` configuration. 2024-01-11T23:06:23,579 !! 2024-01-11T23:06:23,580 ******************************************************************************** 2024-01-11T23:06:23,580 ############################ 2024-01-11T23:06:23,581 # Package would be ignored # 2024-01-11T23:06:23,582 ############################ 2024-01-11T23:06:23,582 Python recognizes 'witch_msa.tools.magus.align.merge.graph_trace' as an importable package[^1], 2024-01-11T23:06:23,583 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,584 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,585 package, please make sure that 'witch_msa.tools.magus.align.merge.graph_trace' is explicitly added 2024-01-11T23:06:23,585 to the `packages` configuration field. 2024-01-11T23:06:23,586 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,587 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,588 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,589 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,590 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,591 If you don't want 'witch_msa.tools.magus.align.merge.graph_trace' to be distributed and are 2024-01-11T23:06:23,591 already explicitly excluding 'witch_msa.tools.magus.align.merge.graph_trace' via 2024-01-11T23:06:23,592 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,592 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,593 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,594 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,595 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,597 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,598 even if it does not contain any `.py` files. 2024-01-11T23:06:23,599 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,599 directory, all directories are treated like packages. 2024-01-11T23:06:23,600 ******************************************************************************** 2024-01-11T23:06:23,601 !! 2024-01-11T23:06:23,602 check.warn(importable) 2024-01-11T23:06:23,603 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.helpers' is absent from the `packages` configuration. 2024-01-11T23:06:23,603 !! 2024-01-11T23:06:23,604 ******************************************************************************** 2024-01-11T23:06:23,605 ############################ 2024-01-11T23:06:23,606 # Package would be ignored # 2024-01-11T23:06:23,606 ############################ 2024-01-11T23:06:23,607 Python recognizes 'witch_msa.tools.magus.helpers' as an importable package[^1], 2024-01-11T23:06:23,608 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,609 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,609 package, please make sure that 'witch_msa.tools.magus.helpers' is explicitly added 2024-01-11T23:06:23,610 to the `packages` configuration field. 2024-01-11T23:06:23,611 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,611 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,612 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,613 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,614 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,615 If you don't want 'witch_msa.tools.magus.helpers' to be distributed and are 2024-01-11T23:06:23,616 already explicitly excluding 'witch_msa.tools.magus.helpers' via 2024-01-11T23:06:23,616 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,617 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,617 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,618 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,619 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,621 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,622 even if it does not contain any `.py` files. 2024-01-11T23:06:23,623 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,623 directory, all directories are treated like packages. 2024-01-11T23:06:23,624 ******************************************************************************** 2024-01-11T23:06:23,625 !! 2024-01-11T23:06:23,626 check.warn(importable) 2024-01-11T23:06:23,626 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tasks' is absent from the `packages` configuration. 2024-01-11T23:06:23,627 !! 2024-01-11T23:06:23,628 ******************************************************************************** 2024-01-11T23:06:23,628 ############################ 2024-01-11T23:06:23,629 # Package would be ignored # 2024-01-11T23:06:23,630 ############################ 2024-01-11T23:06:23,630 Python recognizes 'witch_msa.tools.magus.tasks' as an importable package[^1], 2024-01-11T23:06:23,631 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,632 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,632 package, please make sure that 'witch_msa.tools.magus.tasks' is explicitly added 2024-01-11T23:06:23,633 to the `packages` configuration field. 2024-01-11T23:06:23,634 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,635 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,636 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,637 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,638 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,639 If you don't want 'witch_msa.tools.magus.tasks' to be distributed and are 2024-01-11T23:06:23,640 already explicitly excluding 'witch_msa.tools.magus.tasks' via 2024-01-11T23:06:23,641 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,642 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,642 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,643 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,644 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,646 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,647 even if it does not contain any `.py` files. 2024-01-11T23:06:23,652 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,662 directory, all directories are treated like packages. 2024-01-11T23:06:23,689 ******************************************************************************** 2024-01-11T23:06:23,707 !! 2024-01-11T23:06:23,708 check.warn(importable) 2024-01-11T23:06:23,708 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools' is absent from the `packages` configuration. 2024-01-11T23:06:23,709 !! 2024-01-11T23:06:23,710 ******************************************************************************** 2024-01-11T23:06:23,710 ############################ 2024-01-11T23:06:23,711 # Package would be ignored # 2024-01-11T23:06:23,711 ############################ 2024-01-11T23:06:23,712 Python recognizes 'witch_msa.tools.magus.tools' as an importable package[^1], 2024-01-11T23:06:23,712 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,713 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,714 package, please make sure that 'witch_msa.tools.magus.tools' is explicitly added 2024-01-11T23:06:23,714 to the `packages` configuration field. 2024-01-11T23:06:23,716 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,718 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,721 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,722 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,723 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,724 If you don't want 'witch_msa.tools.magus.tools' to be distributed and are 2024-01-11T23:06:23,727 already explicitly excluding 'witch_msa.tools.magus.tools' via 2024-01-11T23:06:23,727 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,728 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,730 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,732 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,734 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,735 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,736 even if it does not contain any `.py` files. 2024-01-11T23:06:23,736 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,737 directory, all directories are treated like packages. 2024-01-11T23:06:23,737 ******************************************************************************** 2024-01-11T23:06:23,739 !! 2024-01-11T23:06:23,739 check.warn(importable) 2024-01-11T23:06:23,740 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools.clustal' is absent from the `packages` configuration. 2024-01-11T23:06:23,741 !! 2024-01-11T23:06:23,742 ******************************************************************************** 2024-01-11T23:06:23,745 ############################ 2024-01-11T23:06:23,746 # Package would be ignored # 2024-01-11T23:06:23,747 ############################ 2024-01-11T23:06:23,748 Python recognizes 'witch_msa.tools.magus.tools.clustal' as an importable package[^1], 2024-01-11T23:06:23,749 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,754 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,758 package, please make sure that 'witch_msa.tools.magus.tools.clustal' is explicitly added 2024-01-11T23:06:23,759 to the `packages` configuration field. 2024-01-11T23:06:23,760 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,760 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,761 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,769 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,770 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,780 If you don't want 'witch_msa.tools.magus.tools.clustal' to be distributed and are 2024-01-11T23:06:23,784 already explicitly excluding 'witch_msa.tools.magus.tools.clustal' via 2024-01-11T23:06:23,785 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,786 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,786 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,787 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,788 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,790 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,790 even if it does not contain any `.py` files. 2024-01-11T23:06:23,791 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,791 directory, all directories are treated like packages. 2024-01-11T23:06:23,792 ******************************************************************************** 2024-01-11T23:06:23,793 !! 2024-01-11T23:06:23,794 check.warn(importable) 2024-01-11T23:06:23,798 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools.fasttree' is absent from the `packages` configuration. 2024-01-11T23:06:23,805 !! 2024-01-11T23:06:23,812 ******************************************************************************** 2024-01-11T23:06:23,812 ############################ 2024-01-11T23:06:23,813 # Package would be ignored # 2024-01-11T23:06:23,813 ############################ 2024-01-11T23:06:23,814 Python recognizes 'witch_msa.tools.magus.tools.fasttree' as an importable package[^1], 2024-01-11T23:06:23,814 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,816 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,816 package, please make sure that 'witch_msa.tools.magus.tools.fasttree' is explicitly added 2024-01-11T23:06:23,817 to the `packages` configuration field. 2024-01-11T23:06:23,818 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,818 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,819 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,820 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,821 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,822 If you don't want 'witch_msa.tools.magus.tools.fasttree' to be distributed and are 2024-01-11T23:06:23,822 already explicitly excluding 'witch_msa.tools.magus.tools.fasttree' via 2024-01-11T23:06:23,822 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,823 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,823 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,825 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,827 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,828 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,829 even if it does not contain any `.py` files. 2024-01-11T23:06:23,829 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,830 directory, all directories are treated like packages. 2024-01-11T23:06:23,830 ******************************************************************************** 2024-01-11T23:06:23,831 !! 2024-01-11T23:06:23,832 check.warn(importable) 2024-01-11T23:06:23,833 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools.hmmer' is absent from the `packages` configuration. 2024-01-11T23:06:23,833 !! 2024-01-11T23:06:23,835 ******************************************************************************** 2024-01-11T23:06:23,835 ############################ 2024-01-11T23:06:23,839 # Package would be ignored # 2024-01-11T23:06:23,846 ############################ 2024-01-11T23:06:23,852 Python recognizes 'witch_msa.tools.magus.tools.hmmer' as an importable package[^1], 2024-01-11T23:06:23,853 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,854 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,855 package, please make sure that 'witch_msa.tools.magus.tools.hmmer' is explicitly added 2024-01-11T23:06:23,856 to the `packages` configuration field. 2024-01-11T23:06:23,868 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,871 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,872 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,873 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,874 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,880 If you don't want 'witch_msa.tools.magus.tools.hmmer' to be distributed and are 2024-01-11T23:06:23,884 already explicitly excluding 'witch_msa.tools.magus.tools.hmmer' via 2024-01-11T23:06:23,887 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,888 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,889 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,890 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,902 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,904 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,904 even if it does not contain any `.py` files. 2024-01-11T23:06:23,905 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,905 directory, all directories are treated like packages. 2024-01-11T23:06:23,906 ******************************************************************************** 2024-01-11T23:06:23,907 !! 2024-01-11T23:06:23,907 check.warn(importable) 2024-01-11T23:06:23,908 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools.mafft' is absent from the `packages` configuration. 2024-01-11T23:06:23,908 !! 2024-01-11T23:06:23,909 ******************************************************************************** 2024-01-11T23:06:23,909 ############################ 2024-01-11T23:06:23,910 # Package would be ignored # 2024-01-11T23:06:23,910 ############################ 2024-01-11T23:06:23,911 Python recognizes 'witch_msa.tools.magus.tools.mafft' as an importable package[^1], 2024-01-11T23:06:23,911 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:23,923 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:23,925 package, please make sure that 'witch_msa.tools.magus.tools.mafft' is explicitly added 2024-01-11T23:06:23,927 to the `packages` configuration field. 2024-01-11T23:06:23,941 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:23,952 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:23,959 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:23,961 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:23,962 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:23,963 If you don't want 'witch_msa.tools.magus.tools.mafft' to be distributed and are 2024-01-11T23:06:23,964 already explicitly excluding 'witch_msa.tools.magus.tools.mafft' via 2024-01-11T23:06:23,964 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:23,965 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:23,965 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:23,967 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:23,968 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:23,969 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:23,970 even if it does not contain any `.py` files. 2024-01-11T23:06:23,971 On the other hand, currently there is no concept of package data 2024-01-11T23:06:23,976 directory, all directories are treated like packages. 2024-01-11T23:06:23,979 ******************************************************************************** 2024-01-11T23:06:23,984 !! 2024-01-11T23:06:23,985 check.warn(importable) 2024-01-11T23:06:23,985 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools.mafft.mafftdir.bin' is absent from the `packages` configuration. 2024-01-11T23:06:23,986 !! 2024-01-11T23:06:23,987 ******************************************************************************** 2024-01-11T23:06:23,991 ############################ 2024-01-11T23:06:23,991 # Package would be ignored # 2024-01-11T23:06:23,994 ############################ 2024-01-11T23:06:23,998 Python recognizes 'witch_msa.tools.magus.tools.mafft.mafftdir.bin' as an importable package[^1], 2024-01-11T23:06:24,002 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:24,003 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:24,004 package, please make sure that 'witch_msa.tools.magus.tools.mafft.mafftdir.bin' is explicitly added 2024-01-11T23:06:24,004 to the `packages` configuration field. 2024-01-11T23:06:24,005 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:24,006 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:24,006 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:24,007 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:24,008 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:24,009 If you don't want 'witch_msa.tools.magus.tools.mafft.mafftdir.bin' to be distributed and are 2024-01-11T23:06:24,011 already explicitly excluding 'witch_msa.tools.magus.tools.mafft.mafftdir.bin' via 2024-01-11T23:06:24,019 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:24,024 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:24,024 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:24,027 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:24,029 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:24,030 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:24,031 even if it does not contain any `.py` files. 2024-01-11T23:06:24,032 On the other hand, currently there is no concept of package data 2024-01-11T23:06:24,032 directory, all directories are treated like packages. 2024-01-11T23:06:24,033 ******************************************************************************** 2024-01-11T23:06:24,034 !! 2024-01-11T23:06:24,035 check.warn(importable) 2024-01-11T23:06:24,035 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools.mafft.mafftdir.libexec' is absent from the `packages` configuration. 2024-01-11T23:06:24,036 !! 2024-01-11T23:06:24,038 ******************************************************************************** 2024-01-11T23:06:24,038 ############################ 2024-01-11T23:06:24,039 # Package would be ignored # 2024-01-11T23:06:24,041 ############################ 2024-01-11T23:06:24,045 Python recognizes 'witch_msa.tools.magus.tools.mafft.mafftdir.libexec' as an importable package[^1], 2024-01-11T23:06:24,048 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:24,053 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:24,054 package, please make sure that 'witch_msa.tools.magus.tools.mafft.mafftdir.libexec' is explicitly added 2024-01-11T23:06:24,055 to the `packages` configuration field. 2024-01-11T23:06:24,056 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:24,056 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:24,057 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:24,059 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:24,060 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:24,062 If you don't want 'witch_msa.tools.magus.tools.mafft.mafftdir.libexec' to be distributed and are 2024-01-11T23:06:24,062 already explicitly excluding 'witch_msa.tools.magus.tools.mafft.mafftdir.libexec' via 2024-01-11T23:06:24,063 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:24,066 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:24,068 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:24,077 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:24,078 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:24,082 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:24,083 even if it does not contain any `.py` files. 2024-01-11T23:06:24,083 On the other hand, currently there is no concept of package data 2024-01-11T23:06:24,084 directory, all directories are treated like packages. 2024-01-11T23:06:24,084 ******************************************************************************** 2024-01-11T23:06:24,085 !! 2024-01-11T23:06:24,086 check.warn(importable) 2024-01-11T23:06:24,086 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools.mcl.bin' is absent from the `packages` configuration. 2024-01-11T23:06:24,087 !! 2024-01-11T23:06:24,088 ******************************************************************************** 2024-01-11T23:06:24,088 ############################ 2024-01-11T23:06:24,089 # Package would be ignored # 2024-01-11T23:06:24,090 ############################ 2024-01-11T23:06:24,090 Python recognizes 'witch_msa.tools.magus.tools.mcl.bin' as an importable package[^1], 2024-01-11T23:06:24,091 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:24,092 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:24,093 package, please make sure that 'witch_msa.tools.magus.tools.mcl.bin' is explicitly added 2024-01-11T23:06:24,093 to the `packages` configuration field. 2024-01-11T23:06:24,094 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:24,095 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:24,097 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:24,099 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:24,100 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:24,101 If you don't want 'witch_msa.tools.magus.tools.mcl.bin' to be distributed and are 2024-01-11T23:06:24,102 already explicitly excluding 'witch_msa.tools.magus.tools.mcl.bin' via 2024-01-11T23:06:24,102 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:24,103 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:24,103 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:24,105 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:24,108 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:24,120 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:24,121 even if it does not contain any `.py` files. 2024-01-11T23:06:24,121 On the other hand, currently there is no concept of package data 2024-01-11T23:06:24,122 directory, all directories are treated like packages. 2024-01-11T23:06:24,122 ******************************************************************************** 2024-01-11T23:06:24,123 !! 2024-01-11T23:06:24,124 check.warn(importable) 2024-01-11T23:06:24,124 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools.mlrmcl' is absent from the `packages` configuration. 2024-01-11T23:06:24,125 !! 2024-01-11T23:06:24,127 ******************************************************************************** 2024-01-11T23:06:24,129 ############################ 2024-01-11T23:06:24,131 # Package would be ignored # 2024-01-11T23:06:24,132 ############################ 2024-01-11T23:06:24,132 Python recognizes 'witch_msa.tools.magus.tools.mlrmcl' as an importable package[^1], 2024-01-11T23:06:24,133 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:24,134 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:24,134 package, please make sure that 'witch_msa.tools.magus.tools.mlrmcl' is explicitly added 2024-01-11T23:06:24,135 to the `packages` configuration field. 2024-01-11T23:06:24,136 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:24,136 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:24,136 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:24,138 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:24,141 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:24,149 If you don't want 'witch_msa.tools.magus.tools.mlrmcl' to be distributed and are 2024-01-11T23:06:24,150 already explicitly excluding 'witch_msa.tools.magus.tools.mlrmcl' via 2024-01-11T23:06:24,150 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:24,151 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:24,151 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:24,152 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:24,153 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:24,155 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:24,155 even if it does not contain any `.py` files. 2024-01-11T23:06:24,156 On the other hand, currently there is no concept of package data 2024-01-11T23:06:24,157 directory, all directories are treated like packages. 2024-01-11T23:06:24,157 ******************************************************************************** 2024-01-11T23:06:24,159 !! 2024-01-11T23:06:24,159 check.warn(importable) 2024-01-11T23:06:24,160 /tmp/pip-build-env-rhkuep5t/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'witch_msa.tools.magus.tools.raxmlng' is absent from the `packages` configuration. 2024-01-11T23:06:24,160 !! 2024-01-11T23:06:24,161 ******************************************************************************** 2024-01-11T23:06:24,162 ############################ 2024-01-11T23:06:24,163 # Package would be ignored # 2024-01-11T23:06:24,164 ############################ 2024-01-11T23:06:24,164 Python recognizes 'witch_msa.tools.magus.tools.raxmlng' as an importable package[^1], 2024-01-11T23:06:24,165 but it is absent from setuptools' `packages` configuration. 2024-01-11T23:06:24,166 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-11T23:06:24,166 package, please make sure that 'witch_msa.tools.magus.tools.raxmlng' is explicitly added 2024-01-11T23:06:24,167 to the `packages` configuration field. 2024-01-11T23:06:24,168 Alternatively, you can also rely on setuptools' discovery methods 2024-01-11T23:06:24,169 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-11T23:06:24,170 instead of `find_packages(...)`/`find:`). 2024-01-11T23:06:24,171 You can read more about "package discovery" on setuptools documentation page: 2024-01-11T23:06:24,172 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-11T23:06:24,173 If you don't want 'witch_msa.tools.magus.tools.raxmlng' to be distributed and are 2024-01-11T23:06:24,173 already explicitly excluding 'witch_msa.tools.magus.tools.raxmlng' via 2024-01-11T23:06:24,174 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-11T23:06:24,175 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-11T23:06:24,175 combination with a more fine grained `package-data` configuration. 2024-01-11T23:06:24,176 You can read more about "package data files" on setuptools documentation page: 2024-01-11T23:06:24,178 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-11T23:06:24,179 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-11T23:06:24,180 even if it does not contain any `.py` files. 2024-01-11T23:06:24,181 On the other hand, currently there is no concept of package data 2024-01-11T23:06:24,183 directory, all directories are treated like packages. 2024-01-11T23:06:24,184 ******************************************************************************** 2024-01-11T23:06:24,185 !! 2024-01-11T23:06:24,186 check.warn(importable) 2024-01-11T23:06:24,186 copying witch_msa/default.config -> build/lib/witch_msa 2024-01-11T23:06:24,187 creating build/lib/witch_msa/tools 2024-01-11T23:06:24,187 creating build/lib/witch_msa/tools/macOS 2024-01-11T23:06:24,188 copying witch_msa/tools/macOS/FastTreeMP -> build/lib/witch_msa/tools/macOS 2024-01-11T23:06:24,188 copying witch_msa/tools/macOS/hmmalign -> build/lib/witch_msa/tools/macOS 2024-01-11T23:06:24,189 copying witch_msa/tools/macOS/hmmbuild -> build/lib/witch_msa/tools/macOS 2024-01-11T23:06:24,189 copying witch_msa/tools/macOS/hmmsearch -> build/lib/witch_msa/tools/macOS 2024-01-11T23:06:24,190 copying witch_msa/tools/macOS/mafft -> build/lib/witch_msa/tools/macOS 2024-01-11T23:06:24,190 copying witch_msa/tools/macOS/mcl -> build/lib/witch_msa/tools/macOS 2024-01-11T23:06:24,191 creating build/lib/witch_msa/tools/magus 2024-01-11T23:06:24,191 copying witch_msa/tools/magus/README.md -> build/lib/witch_msa/tools/magus 2024-01-11T23:06:24,192 copying witch_msa/tools/magus/configuration.py -> build/lib/witch_msa/tools/magus 2024-01-11T23:06:24,192 copying witch_msa/tools/magus/magus.py -> build/lib/witch_msa/tools/magus 2024-01-11T23:06:24,193 creating build/lib/witch_msa/tools/magus/align 2024-01-11T23:06:24,193 copying witch_msa/tools/magus/align/__init__.py -> build/lib/witch_msa/tools/magus/align 2024-01-11T23:06:24,194 copying witch_msa/tools/magus/align/aligner.py -> build/lib/witch_msa/tools/magus/align 2024-01-11T23:06:24,195 copying witch_msa/tools/magus/align/alignment_context.py -> build/lib/witch_msa/tools/magus/align 2024-01-11T23:06:24,195 creating build/lib/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:24,196 copying witch_msa/tools/magus/align/decompose/__init__.py -> build/lib/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:24,197 copying witch_msa/tools/magus/align/decompose/decomposer.py -> build/lib/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:24,197 copying witch_msa/tools/magus/align/decompose/initial_tree.py -> build/lib/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:24,198 copying witch_msa/tools/magus/align/decompose/kmh.py -> build/lib/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:24,200 creating build/lib/witch_msa/tools/magus/align/merge 2024-01-11T23:06:24,203 copying witch_msa/tools/magus/align/merge/__init__.py -> build/lib/witch_msa/tools/magus/align/merge 2024-01-11T23:06:24,204 copying witch_msa/tools/magus/align/merge/alignment_graph.py -> build/lib/witch_msa/tools/magus/align/merge 2024-01-11T23:06:24,205 copying witch_msa/tools/magus/align/merge/alignment_writer.py -> build/lib/witch_msa/tools/magus/align/merge 2024-01-11T23:06:24,206 copying witch_msa/tools/magus/align/merge/merger.py -> build/lib/witch_msa/tools/magus/align/merge 2024-01-11T23:06:24,206 copying witch_msa/tools/magus/align/merge/optimizer.py -> build/lib/witch_msa/tools/magus/align/merge 2024-01-11T23:06:24,206 creating build/lib/witch_msa/tools/magus/align/merge/graph_build 2024-01-11T23:06:24,207 copying witch_msa/tools/magus/align/merge/graph_build/__init__.py -> build/lib/witch_msa/tools/magus/align/merge/graph_build 2024-01-11T23:06:24,207 copying witch_msa/tools/magus/align/merge/graph_build/graph_builder.py -> build/lib/witch_msa/tools/magus/align/merge/graph_build 2024-01-11T23:06:24,208 creating build/lib/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:24,208 copying witch_msa/tools/magus/align/merge/graph_cluster/__init__.py -> build/lib/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:24,209 copying witch_msa/tools/magus/align/merge/graph_cluster/clean_clusters.py -> build/lib/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:24,210 copying witch_msa/tools/magus/align/merge/graph_cluster/clusterer.py -> build/lib/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:24,210 copying witch_msa/tools/magus/align/merge/graph_cluster/mcl.py -> build/lib/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:24,211 copying witch_msa/tools/magus/align/merge/graph_cluster/mlr_mcl.py -> build/lib/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:24,212 copying witch_msa/tools/magus/align/merge/graph_cluster/rg.py -> build/lib/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:24,212 creating build/lib/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:24,219 copying witch_msa/tools/magus/align/merge/graph_trace/__init__.py -> build/lib/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:24,225 copying witch_msa/tools/magus/align/merge/graph_trace/fm.py -> build/lib/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:24,225 copying witch_msa/tools/magus/align/merge/graph_trace/min_clusters.py -> build/lib/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:24,226 copying witch_msa/tools/magus/align/merge/graph_trace/mwt_search.py -> build/lib/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:24,227 copying witch_msa/tools/magus/align/merge/graph_trace/naive.py -> build/lib/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:24,227 copying witch_msa/tools/magus/align/merge/graph_trace/rg_fast_search.py -> build/lib/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:24,228 copying witch_msa/tools/magus/align/merge/graph_trace/rg_search.py -> build/lib/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:24,231 copying witch_msa/tools/magus/align/merge/graph_trace/tracer.py -> build/lib/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:24,232 creating build/lib/witch_msa/tools/magus/helpers 2024-01-11T23:06:24,232 copying witch_msa/tools/magus/helpers/__init__.py -> build/lib/witch_msa/tools/magus/helpers 2024-01-11T23:06:24,233 copying witch_msa/tools/magus/helpers/hmmutils.py -> build/lib/witch_msa/tools/magus/helpers 2024-01-11T23:06:24,234 copying witch_msa/tools/magus/helpers/sequenceutils.py -> build/lib/witch_msa/tools/magus/helpers 2024-01-11T23:06:24,235 copying witch_msa/tools/magus/helpers/treeutils.py -> build/lib/witch_msa/tools/magus/helpers 2024-01-11T23:06:24,236 creating build/lib/witch_msa/tools/magus/tasks 2024-01-11T23:06:24,238 copying witch_msa/tools/magus/tasks/__init__.py -> build/lib/witch_msa/tools/magus/tasks 2024-01-11T23:06:24,240 copying witch_msa/tools/magus/tasks/controller.py -> build/lib/witch_msa/tools/magus/tasks 2024-01-11T23:06:24,241 copying witch_msa/tools/magus/tasks/files.py -> build/lib/witch_msa/tools/magus/tasks 2024-01-11T23:06:24,244 copying witch_msa/tools/magus/tasks/manager.py -> build/lib/witch_msa/tools/magus/tasks 2024-01-11T23:06:24,244 copying witch_msa/tools/magus/tasks/task.py -> build/lib/witch_msa/tools/magus/tasks 2024-01-11T23:06:24,245 creating build/lib/witch_msa/tools/magus/tools 2024-01-11T23:06:24,245 copying witch_msa/tools/magus/tools/__init__.py -> build/lib/witch_msa/tools/magus/tools 2024-01-11T23:06:24,246 copying witch_msa/tools/magus/tools/external_tools.py -> build/lib/witch_msa/tools/magus/tools 2024-01-11T23:06:24,246 creating build/lib/witch_msa/tools/magus/tools/clustal 2024-01-11T23:06:24,247 copying witch_msa/tools/magus/tools/clustal/clustalo -> build/lib/witch_msa/tools/magus/tools/clustal 2024-01-11T23:06:24,247 creating build/lib/witch_msa/tools/magus/tools/fasttree 2024-01-11T23:06:24,248 copying witch_msa/tools/magus/tools/fasttree/FastTree -> build/lib/witch_msa/tools/magus/tools/fasttree 2024-01-11T23:06:24,248 copying witch_msa/tools/magus/tools/fasttree/FastTreeMP -> build/lib/witch_msa/tools/magus/tools/fasttree 2024-01-11T23:06:24,249 creating build/lib/witch_msa/tools/magus/tools/hmmer 2024-01-11T23:06:24,249 copying witch_msa/tools/magus/tools/hmmer/hmmalign -> build/lib/witch_msa/tools/magus/tools/hmmer 2024-01-11T23:06:24,250 copying witch_msa/tools/magus/tools/hmmer/hmmbuild -> build/lib/witch_msa/tools/magus/tools/hmmer 2024-01-11T23:06:24,250 copying witch_msa/tools/magus/tools/hmmer/hmmsearch -> build/lib/witch_msa/tools/magus/tools/hmmer 2024-01-11T23:06:24,251 creating build/lib/witch_msa/tools/magus/tools/mafft 2024-01-11T23:06:24,252 copying witch_msa/tools/magus/tools/mafft/mafft -> build/lib/witch_msa/tools/magus/tools/mafft 2024-01-11T23:06:24,252 creating build/lib/witch_msa/tools/magus/tools/mafft/mafftdir 2024-01-11T23:06:24,253 creating build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/bin 2024-01-11T23:06:24,254 copying witch_msa/tools/magus/tools/mafft/mafftdir/bin/mafft -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/bin 2024-01-11T23:06:24,257 creating build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,262 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/addsingle -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,264 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/contrafoldwrap -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,265 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/countlen -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,266 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dash_client -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,266 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/disttbfast -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,267 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dndblast -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,271 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dndfast7 -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,272 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dndpre -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,273 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dvtditr -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,275 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/f2cl -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,280 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/getlag -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,287 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/hex2maffttext -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,288 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft-distance -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,288 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft-homologs.1 -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,289 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft-profile -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,289 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft.1 -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,290 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafftash_premafft.pl -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,290 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/maffttext2hex -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,291 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/makedirectionlist -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,291 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mccaskillwrap -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,292 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/multi2hat3s -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,292 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/nodepair -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,293 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/pairash -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,312 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/pairlocalalign -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,332 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/regtable2seq -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,350 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/replaceu -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,367 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/restoreu -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,382 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/score -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,397 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/seekquencer_premafft.pl -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,400 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/seq2regtable -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,412 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/setcore -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,439 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/setdirection -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,454 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/sextet5 -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,470 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/splittbfast -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,489 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/tbfast -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,511 copying witch_msa/tools/magus/tools/mafft/mafftdir/libexec/version -> build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:24,523 creating build/lib/witch_msa/tools/magus/tools/mcl 2024-01-11T23:06:24,524 creating build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,525 copying witch_msa/tools/magus/tools/mcl/bin/clm -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,549 copying witch_msa/tools/magus/tools/mcl/bin/clmformat -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,573 copying witch_msa/tools/magus/tools/mcl/bin/clxdo -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,576 copying witch_msa/tools/magus/tools/mcl/bin/mcl -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,596 copying witch_msa/tools/magus/tools/mcl/bin/mclblastline -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,599 copying witch_msa/tools/magus/tools/mcl/bin/mclcm -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,621 copying witch_msa/tools/magus/tools/mcl/bin/mclpipeline -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,624 copying witch_msa/tools/magus/tools/mcl/bin/mcx -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,650 copying witch_msa/tools/magus/tools/mcl/bin/mcxarray -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,671 copying witch_msa/tools/magus/tools/mcl/bin/mcxassemble -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,691 copying witch_msa/tools/magus/tools/mcl/bin/mcxdeblast -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,694 copying witch_msa/tools/magus/tools/mcl/bin/mcxdump -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,713 copying witch_msa/tools/magus/tools/mcl/bin/mcxi -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,740 copying witch_msa/tools/magus/tools/mcl/bin/mcxload -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,762 copying witch_msa/tools/magus/tools/mcl/bin/mcxmap -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,775 copying witch_msa/tools/magus/tools/mcl/bin/mcxrand -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,789 copying witch_msa/tools/magus/tools/mcl/bin/mcxsubs -> build/lib/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:24,810 creating build/lib/witch_msa/tools/magus/tools/mlrmcl 2024-01-11T23:06:24,812 copying witch_msa/tools/magus/tools/mlrmcl/README -> build/lib/witch_msa/tools/magus/tools/mlrmcl 2024-01-11T23:06:24,814 copying witch_msa/tools/magus/tools/mlrmcl/mlrmcl -> build/lib/witch_msa/tools/magus/tools/mlrmcl 2024-01-11T23:06:24,819 copying witch_msa/tools/magus/tools/mlrmcl/ncut -> build/lib/witch_msa/tools/magus/tools/mlrmcl 2024-01-11T23:06:24,824 creating build/lib/witch_msa/tools/magus/tools/raxmlng 2024-01-11T23:06:24,825 copying witch_msa/tools/magus/tools/raxmlng/raxml-ng -> build/lib/witch_msa/tools/magus/tools/raxmlng 2024-01-11T23:06:24,936 running build_scripts 2024-01-11T23:06:24,937 creating build/scripts-3.11 2024-01-11T23:06:24,938 copying and adjusting bin/witch-msa -> build/scripts-3.11 2024-01-11T23:06:24,940 copying and adjusting witch.py -> build/scripts-3.11 2024-01-11T23:06:24,941 changing mode of build/scripts-3.11/witch-msa from 644 to 755 2024-01-11T23:06:24,942 changing mode of build/scripts-3.11/witch.py from 644 to 755 2024-01-11T23:06:24,949 installing to build/bdist.linux-armv7l/wheel 2024-01-11T23:06:24,950 running install 2024-01-11T23:06:24,974 running install_lib 2024-01-11T23:06:24,979 creating build/bdist.linux-armv7l 2024-01-11T23:06:24,980 creating build/bdist.linux-armv7l/wheel 2024-01-11T23:06:24,982 creating build/bdist.linux-armv7l/wheel/witch_msa 2024-01-11T23:06:24,984 copying build/lib/witch_msa/configs.py -> build/bdist.linux-armv7l/wheel/witch_msa 2024-01-11T23:06:24,987 creating build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:24,989 copying build/lib/witch_msa/gcmm/callback.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:24,991 copying build/lib/witch_msa/gcmm/merger.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:24,993 copying build/lib/witch_msa/gcmm/tree.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:24,996 copying build/lib/witch_msa/gcmm/aligner.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:24,999 copying build/lib/witch_msa/gcmm/algorithm.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:25,002 copying build/lib/witch_msa/gcmm/loader.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:25,005 copying build/lib/witch_msa/gcmm/weighting.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:25,008 copying build/lib/witch_msa/gcmm/task.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:25,011 copying build/lib/witch_msa/gcmm/decompose_tree.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:25,014 copying build/lib/witch_msa/gcmm/gcmm.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:25,016 copying build/lib/witch_msa/gcmm/results_handler.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:25,019 copying build/lib/witch_msa/gcmm/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:25,022 copying build/lib/witch_msa/gcmm/backbone.py -> build/bdist.linux-armv7l/wheel/witch_msa/gcmm 2024-01-11T23:06:25,025 creating build/bdist.linux-armv7l/wheel/witch_msa/tools 2024-01-11T23:06:25,027 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus 2024-01-11T23:06:25,028 copying build/lib/witch_msa/tools/magus/magus.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus 2024-01-11T23:06:25,032 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align 2024-01-11T23:06:25,033 copying build/lib/witch_msa/tools/magus/align/alignment_context.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align 2024-01-11T23:06:25,036 copying build/lib/witch_msa/tools/magus/align/aligner.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align 2024-01-11T23:06:25,039 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:25,041 copying build/lib/witch_msa/tools/magus/align/decompose/initial_tree.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:25,044 copying build/lib/witch_msa/tools/magus/align/decompose/decomposer.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:25,046 copying build/lib/witch_msa/tools/magus/align/decompose/kmh.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:25,049 copying build/lib/witch_msa/tools/magus/align/decompose/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/decompose 2024-01-11T23:06:25,051 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge 2024-01-11T23:06:25,053 copying build/lib/witch_msa/tools/magus/align/merge/merger.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge 2024-01-11T23:06:25,056 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_build 2024-01-11T23:06:25,057 copying build/lib/witch_msa/tools/magus/align/merge/graph_build/graph_builder.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_build 2024-01-11T23:06:25,060 copying build/lib/witch_msa/tools/magus/align/merge/graph_build/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_build 2024-01-11T23:06:25,063 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:25,064 copying build/lib/witch_msa/tools/magus/align/merge/graph_cluster/clean_clusters.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:25,066 copying build/lib/witch_msa/tools/magus/align/merge/graph_cluster/clusterer.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:25,069 copying build/lib/witch_msa/tools/magus/align/merge/graph_cluster/mlr_mcl.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:25,071 copying build/lib/witch_msa/tools/magus/align/merge/graph_cluster/mcl.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:25,073 copying build/lib/witch_msa/tools/magus/align/merge/graph_cluster/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:25,075 copying build/lib/witch_msa/tools/magus/align/merge/graph_cluster/rg.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_cluster 2024-01-11T23:06:25,077 copying build/lib/witch_msa/tools/magus/align/merge/optimizer.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge 2024-01-11T23:06:25,080 copying build/lib/witch_msa/tools/magus/align/merge/alignment_writer.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge 2024-01-11T23:06:25,083 copying build/lib/witch_msa/tools/magus/align/merge/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge 2024-01-11T23:06:25,085 copying build/lib/witch_msa/tools/magus/align/merge/alignment_graph.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge 2024-01-11T23:06:25,088 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:25,089 copying build/lib/witch_msa/tools/magus/align/merge/graph_trace/rg_search.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:25,092 copying build/lib/witch_msa/tools/magus/align/merge/graph_trace/rg_fast_search.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:25,095 copying build/lib/witch_msa/tools/magus/align/merge/graph_trace/naive.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:25,097 copying build/lib/witch_msa/tools/magus/align/merge/graph_trace/min_clusters.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:25,100 copying build/lib/witch_msa/tools/magus/align/merge/graph_trace/fm.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:25,103 copying build/lib/witch_msa/tools/magus/align/merge/graph_trace/mwt_search.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:25,106 copying build/lib/witch_msa/tools/magus/align/merge/graph_trace/tracer.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:25,109 copying build/lib/witch_msa/tools/magus/align/merge/graph_trace/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align/merge/graph_trace 2024-01-11T23:06:25,111 copying build/lib/witch_msa/tools/magus/align/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/align 2024-01-11T23:06:25,113 copying build/lib/witch_msa/tools/magus/README.md -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus 2024-01-11T23:06:25,116 copying build/lib/witch_msa/tools/magus/configuration.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus 2024-01-11T23:06:25,119 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools 2024-01-11T23:06:25,121 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/raxmlng 2024-01-11T23:06:25,122 copying build/lib/witch_msa/tools/magus/tools/raxmlng/raxml-ng -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/raxmlng 2024-01-11T23:06:25,224 copying build/lib/witch_msa/tools/magus/tools/external_tools.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools 2024-01-11T23:06:25,227 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/clustal 2024-01-11T23:06:25,228 copying build/lib/witch_msa/tools/magus/tools/clustal/clustalo -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/clustal 2024-01-11T23:06:25,317 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mlrmcl 2024-01-11T23:06:25,318 copying build/lib/witch_msa/tools/magus/tools/mlrmcl/README -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mlrmcl 2024-01-11T23:06:25,321 copying build/lib/witch_msa/tools/magus/tools/mlrmcl/ncut -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mlrmcl 2024-01-11T23:06:25,326 copying build/lib/witch_msa/tools/magus/tools/mlrmcl/mlrmcl -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mlrmcl 2024-01-11T23:06:25,332 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl 2024-01-11T23:06:25,334 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,335 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/clm -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,368 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcxmap -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,381 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcxload -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,405 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/clmformat -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,443 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mclcm -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,463 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcl -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,488 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcxassemble -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,507 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcx -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,537 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/clxdo -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,540 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mclpipeline -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,543 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcxdeblast -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,545 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcxarray -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,569 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcxsubs -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,589 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcxrand -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,607 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mclblastline -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,609 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcxi -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,639 copying build/lib/witch_msa/tools/magus/tools/mcl/bin/mcxdump -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mcl/bin 2024-01-11T23:06:25,660 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft 2024-01-11T23:06:25,662 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir 2024-01-11T23:06:25,664 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,665 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/setcore -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,685 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/contrafoldwrap -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,701 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/disttbfast -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,724 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft-homologs.1 -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,727 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/seekquencer_premafft.pl -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,729 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/sextet5 -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,745 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/setdirection -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,764 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/f2cl -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,782 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dndfast7 -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,804 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/nodepair -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,827 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft-distance -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,845 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/restoreu -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,861 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafftash_premafft.pl -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,863 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft.1 -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,866 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/multi2hat3s -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,884 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mccaskillwrap -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,902 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dndpre -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,919 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/maffttext2hex -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,929 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/splittbfast -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,948 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/hex2maffttext -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,959 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/addsingle -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,982 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/version -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:25,992 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dash_client -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,066 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/regtable2seq -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,080 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft-profile -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,144 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/seq2regtable -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,156 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/countlen -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,168 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/tbfast -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,188 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dndblast -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,205 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/pairlocalalign -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,228 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/pairash -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,248 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/getlag -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,267 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/score -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,283 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/replaceu -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,298 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dvtditr -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,318 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/libexec/makedirectionlist -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/libexec 2024-01-11T23:06:26,339 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/bin 2024-01-11T23:06:26,340 copying build/lib/witch_msa/tools/magus/tools/mafft/mafftdir/bin/mafft -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft/mafftdir/bin 2024-01-11T23:06:26,344 copying build/lib/witch_msa/tools/magus/tools/mafft/mafft -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/mafft 2024-01-11T23:06:26,346 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/hmmer 2024-01-11T23:06:26,347 copying build/lib/witch_msa/tools/magus/tools/hmmer/hmmalign -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/hmmer 2024-01-11T23:06:26,369 copying build/lib/witch_msa/tools/magus/tools/hmmer/hmmsearch -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/hmmer 2024-01-11T23:06:26,392 copying build/lib/witch_msa/tools/magus/tools/hmmer/hmmbuild -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/hmmer 2024-01-11T23:06:26,414 copying build/lib/witch_msa/tools/magus/tools/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools 2024-01-11T23:06:26,416 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/fasttree 2024-01-11T23:06:26,417 copying build/lib/witch_msa/tools/magus/tools/fasttree/FastTree -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/fasttree 2024-01-11T23:06:26,425 copying build/lib/witch_msa/tools/magus/tools/fasttree/FastTreeMP -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tools/fasttree 2024-01-11T23:06:26,433 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tasks 2024-01-11T23:06:26,434 copying build/lib/witch_msa/tools/magus/tasks/controller.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tasks 2024-01-11T23:06:26,436 copying build/lib/witch_msa/tools/magus/tasks/manager.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tasks 2024-01-11T23:06:26,438 copying build/lib/witch_msa/tools/magus/tasks/task.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tasks 2024-01-11T23:06:26,440 copying build/lib/witch_msa/tools/magus/tasks/files.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tasks 2024-01-11T23:06:26,441 copying build/lib/witch_msa/tools/magus/tasks/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/tasks 2024-01-11T23:06:26,443 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/helpers 2024-01-11T23:06:26,444 copying build/lib/witch_msa/tools/magus/helpers/treeutils.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/helpers 2024-01-11T23:06:26,446 copying build/lib/witch_msa/tools/magus/helpers/sequenceutils.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/helpers 2024-01-11T23:06:26,449 copying build/lib/witch_msa/tools/magus/helpers/hmmutils.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/helpers 2024-01-11T23:06:26,451 copying build/lib/witch_msa/tools/magus/helpers/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/tools/magus/helpers 2024-01-11T23:06:26,453 creating build/bdist.linux-armv7l/wheel/witch_msa/tools/macOS 2024-01-11T23:06:26,454 copying build/lib/witch_msa/tools/macOS/hmmalign -> build/bdist.linux-armv7l/wheel/witch_msa/tools/macOS 2024-01-11T23:06:26,469 copying build/lib/witch_msa/tools/macOS/FastTreeMP -> build/bdist.linux-armv7l/wheel/witch_msa/tools/macOS 2024-01-11T23:06:26,476 copying build/lib/witch_msa/tools/macOS/hmmsearch -> build/bdist.linux-armv7l/wheel/witch_msa/tools/macOS 2024-01-11T23:06:26,497 copying build/lib/witch_msa/tools/macOS/mcl -> build/bdist.linux-armv7l/wheel/witch_msa/tools/macOS 2024-01-11T23:06:26,505 copying build/lib/witch_msa/tools/macOS/mafft -> build/bdist.linux-armv7l/wheel/witch_msa/tools/macOS 2024-01-11T23:06:26,509 copying build/lib/witch_msa/tools/macOS/hmmbuild -> build/bdist.linux-armv7l/wheel/witch_msa/tools/macOS 2024-01-11T23:06:26,528 copying build/lib/witch_msa/default.config -> build/bdist.linux-armv7l/wheel/witch_msa 2024-01-11T23:06:26,530 copying build/lib/witch_msa/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa 2024-01-11T23:06:26,532 creating build/bdist.linux-armv7l/wheel/witch_msa/helpers 2024-01-11T23:06:26,533 copying build/lib/witch_msa/helpers/general_tools.py -> build/bdist.linux-armv7l/wheel/witch_msa/helpers 2024-01-11T23:06:26,535 copying build/lib/witch_msa/helpers/pyhmmer_tools.py -> build/bdist.linux-armv7l/wheel/witch_msa/helpers 2024-01-11T23:06:26,537 copying build/lib/witch_msa/helpers/alignment_tools.py -> build/bdist.linux-armv7l/wheel/witch_msa/helpers 2024-01-11T23:06:26,541 copying build/lib/witch_msa/helpers/math_utils.py -> build/bdist.linux-armv7l/wheel/witch_msa/helpers 2024-01-11T23:06:26,543 copying build/lib/witch_msa/helpers/__init__.py -> build/bdist.linux-armv7l/wheel/witch_msa/helpers 2024-01-11T23:06:26,545 copying build/lib/witch_msa/init_configs.py -> build/bdist.linux-armv7l/wheel/witch_msa 2024-01-11T23:06:26,547 running install_egg_info 2024-01-11T23:06:26,551 Copying witch_msa.egg-info to build/bdist.linux-armv7l/wheel/witch_msa-1.0.3-py3.11.egg-info 2024-01-11T23:06:26,565 running install_scripts 2024-01-11T23:06:26,567 creating build/bdist.linux-armv7l/wheel/witch_msa-1.0.3.data 2024-01-11T23:06:26,567 creating build/bdist.linux-armv7l/wheel/witch_msa-1.0.3.data/scripts 2024-01-11T23:06:26,568 copying build/scripts-3.11/witch-msa -> build/bdist.linux-armv7l/wheel/witch_msa-1.0.3.data/scripts 2024-01-11T23:06:26,571 copying build/scripts-3.11/witch.py -> build/bdist.linux-armv7l/wheel/witch_msa-1.0.3.data/scripts 2024-01-11T23:06:26,573 changing mode of build/bdist.linux-armv7l/wheel/witch_msa-1.0.3.data/scripts/witch-msa to 755 2024-01-11T23:06:26,574 changing mode of build/bdist.linux-armv7l/wheel/witch_msa-1.0.3.data/scripts/witch.py to 755 2024-01-11T23:06:26,597 creating build/bdist.linux-armv7l/wheel/witch_msa-1.0.3.dist-info/WHEEL 2024-01-11T23:06:26,599 creating '/tmp/pip-wheel-oqcy2j2i/.tmp-t9bs9ni0/witch_msa-1.0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-11T23:06:26,603 adding 'witch_msa/__init__.py' 2024-01-11T23:06:26,605 adding 'witch_msa/configs.py' 2024-01-11T23:06:26,606 adding 'witch_msa/default.config' 2024-01-11T23:06:26,608 adding 'witch_msa/init_configs.py' 2024-01-11T23:06:26,610 adding 'witch_msa/gcmm/__init__.py' 2024-01-11T23:06:26,613 adding 'witch_msa/gcmm/algorithm.py' 2024-01-11T23:06:26,616 adding 'witch_msa/gcmm/aligner.py' 2024-01-11T23:06:26,618 adding 'witch_msa/gcmm/backbone.py' 2024-01-11T23:06:26,619 adding 'witch_msa/gcmm/callback.py' 2024-01-11T23:06:26,621 adding 'witch_msa/gcmm/decompose_tree.py' 2024-01-11T23:06:26,623 adding 'witch_msa/gcmm/gcmm.py' 2024-01-11T23:06:26,625 adding 'witch_msa/gcmm/loader.py' 2024-01-11T23:06:26,627 adding 'witch_msa/gcmm/merger.py' 2024-01-11T23:06:26,629 adding 'witch_msa/gcmm/results_handler.py' 2024-01-11T23:06:26,630 adding 'witch_msa/gcmm/task.py' 2024-01-11T23:06:26,633 adding 'witch_msa/gcmm/tree.py' 2024-01-11T23:06:26,634 adding 'witch_msa/gcmm/weighting.py' 2024-01-11T23:06:26,636 adding 'witch_msa/helpers/__init__.py' 2024-01-11T23:06:26,643 adding 'witch_msa/helpers/alignment_tools.py' 2024-01-11T23:06:26,644 adding 'witch_msa/helpers/general_tools.py' 2024-01-11T23:06:26,645 adding 'witch_msa/helpers/math_utils.py' 2024-01-11T23:06:26,647 adding 'witch_msa/helpers/pyhmmer_tools.py' 2024-01-11T23:06:26,704 adding 'witch_msa/tools/macOS/FastTreeMP' 2024-01-11T23:06:26,881 adding 'witch_msa/tools/macOS/hmmalign' 2024-01-11T23:06:27,048 adding 'witch_msa/tools/macOS/hmmbuild' 2024-01-11T23:06:27,223 adding 'witch_msa/tools/macOS/hmmsearch' 2024-01-11T23:06:27,239 adding 'witch_msa/tools/macOS/mafft' 2024-01-11T23:06:27,308 adding 'witch_msa/tools/macOS/mcl' 2024-01-11T23:06:27,313 adding 'witch_msa/tools/magus/README.md' 2024-01-11T23:06:27,314 adding 'witch_msa/tools/magus/configuration.py' 2024-01-11T23:06:27,316 adding 'witch_msa/tools/magus/magus.py' 2024-01-11T23:06:27,318 adding 'witch_msa/tools/magus/align/__init__.py' 2024-01-11T23:06:27,319 adding 'witch_msa/tools/magus/align/aligner.py' 2024-01-11T23:06:27,321 adding 'witch_msa/tools/magus/align/alignment_context.py' 2024-01-11T23:06:27,323 adding 'witch_msa/tools/magus/align/decompose/__init__.py' 2024-01-11T23:06:27,324 adding 'witch_msa/tools/magus/align/decompose/decomposer.py' 2024-01-11T23:06:27,326 adding 'witch_msa/tools/magus/align/decompose/initial_tree.py' 2024-01-11T23:06:27,327 adding 'witch_msa/tools/magus/align/decompose/kmh.py' 2024-01-11T23:06:27,329 adding 'witch_msa/tools/magus/align/merge/__init__.py' 2024-01-11T23:06:27,331 adding 'witch_msa/tools/magus/align/merge/alignment_graph.py' 2024-01-11T23:06:27,333 adding 'witch_msa/tools/magus/align/merge/alignment_writer.py' 2024-01-11T23:06:27,334 adding 'witch_msa/tools/magus/align/merge/merger.py' 2024-01-11T23:06:27,337 adding 'witch_msa/tools/magus/align/merge/optimizer.py' 2024-01-11T23:06:27,339 adding 'witch_msa/tools/magus/align/merge/graph_build/__init__.py' 2024-01-11T23:06:27,340 adding 'witch_msa/tools/magus/align/merge/graph_build/graph_builder.py' 2024-01-11T23:06:27,342 adding 'witch_msa/tools/magus/align/merge/graph_cluster/__init__.py' 2024-01-11T23:06:27,343 adding 'witch_msa/tools/magus/align/merge/graph_cluster/clean_clusters.py' 2024-01-11T23:06:27,345 adding 'witch_msa/tools/magus/align/merge/graph_cluster/clusterer.py' 2024-01-11T23:06:27,346 adding 'witch_msa/tools/magus/align/merge/graph_cluster/mcl.py' 2024-01-11T23:06:27,347 adding 'witch_msa/tools/magus/align/merge/graph_cluster/mlr_mcl.py' 2024-01-11T23:06:27,349 adding 'witch_msa/tools/magus/align/merge/graph_cluster/rg.py' 2024-01-11T23:06:27,350 adding 'witch_msa/tools/magus/align/merge/graph_trace/__init__.py' 2024-01-11T23:06:27,352 adding 'witch_msa/tools/magus/align/merge/graph_trace/fm.py' 2024-01-11T23:06:27,354 adding 'witch_msa/tools/magus/align/merge/graph_trace/min_clusters.py' 2024-01-11T23:06:27,356 adding 'witch_msa/tools/magus/align/merge/graph_trace/mwt_search.py' 2024-01-11T23:06:27,358 adding 'witch_msa/tools/magus/align/merge/graph_trace/naive.py' 2024-01-11T23:06:27,359 adding 'witch_msa/tools/magus/align/merge/graph_trace/rg_fast_search.py' 2024-01-11T23:06:27,361 adding 'witch_msa/tools/magus/align/merge/graph_trace/rg_search.py' 2024-01-11T23:06:27,362 adding 'witch_msa/tools/magus/align/merge/graph_trace/tracer.py' 2024-01-11T23:06:27,363 adding 'witch_msa/tools/magus/helpers/__init__.py' 2024-01-11T23:06:27,365 adding 'witch_msa/tools/magus/helpers/hmmutils.py' 2024-01-11T23:06:27,367 adding 'witch_msa/tools/magus/helpers/sequenceutils.py' 2024-01-11T23:06:27,368 adding 'witch_msa/tools/magus/helpers/treeutils.py' 2024-01-11T23:06:27,370 adding 'witch_msa/tools/magus/tasks/__init__.py' 2024-01-11T23:06:27,371 adding 'witch_msa/tools/magus/tasks/controller.py' 2024-01-11T23:06:27,373 adding 'witch_msa/tools/magus/tasks/files.py' 2024-01-11T23:06:27,374 adding 'witch_msa/tools/magus/tasks/manager.py' 2024-01-11T23:06:27,376 adding 'witch_msa/tools/magus/tasks/task.py' 2024-01-11T23:06:27,377 adding 'witch_msa/tools/magus/tools/__init__.py' 2024-01-11T23:06:27,379 adding 'witch_msa/tools/magus/tools/external_tools.py' 2024-01-11T23:06:28,193 adding 'witch_msa/tools/magus/tools/clustal/clustalo' 2024-01-11T23:06:28,290 adding 'witch_msa/tools/magus/tools/fasttree/FastTree' 2024-01-11T23:06:28,362 adding 'witch_msa/tools/magus/tools/fasttree/FastTreeMP' 2024-01-11T23:06:28,570 adding 'witch_msa/tools/magus/tools/hmmer/hmmalign' 2024-01-11T23:06:28,793 adding 'witch_msa/tools/magus/tools/hmmer/hmmbuild' 2024-01-11T23:06:29,040 adding 'witch_msa/tools/magus/tools/hmmer/hmmsearch' 2024-01-11T23:06:29,051 adding 'witch_msa/tools/magus/tools/mafft/mafft' 2024-01-11T23:06:29,062 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/bin/mafft' 2024-01-11T23:06:29,314 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/addsingle' 2024-01-11T23:06:29,492 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/contrafoldwrap' 2024-01-11T23:06:29,616 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/countlen' 2024-01-11T23:06:30,434 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dash_client' 2024-01-11T23:06:30,714 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/disttbfast' 2024-01-11T23:06:30,894 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dndblast' 2024-01-11T23:06:31,073 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dndfast7' 2024-01-11T23:06:31,250 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dndpre' 2024-01-11T23:06:31,502 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/dvtditr' 2024-01-11T23:06:31,643 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/f2cl' 2024-01-11T23:06:31,876 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/getlag' 2024-01-11T23:06:31,988 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/hex2maffttext' 2024-01-11T23:06:32,164 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft-distance' 2024-01-11T23:06:32,172 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft-homologs.1' 2024-01-11T23:06:32,420 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft-profile' 2024-01-11T23:06:32,430 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafft.1' 2024-01-11T23:06:32,433 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mafftash_premafft.pl' 2024-01-11T23:06:32,537 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/maffttext2hex' 2024-01-11T23:06:32,773 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/makedirectionlist' 2024-01-11T23:06:32,951 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/mccaskillwrap' 2024-01-11T23:06:33,140 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/multi2hat3s' 2024-01-11T23:06:33,387 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/nodepair' 2024-01-11T23:06:33,626 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/pairash' 2024-01-11T23:06:33,869 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/pairlocalalign' 2024-01-11T23:06:34,038 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/regtable2seq' 2024-01-11T23:06:34,206 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/replaceu' 2024-01-11T23:06:34,373 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/restoreu' 2024-01-11T23:06:34,548 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/score' 2024-01-11T23:06:34,557 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/seekquencer_premafft.pl' 2024-01-11T23:06:34,675 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/seq2regtable' 2024-01-11T23:06:34,908 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/setcore' 2024-01-11T23:06:35,077 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/setdirection' 2024-01-11T23:06:35,255 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/sextet5' 2024-01-11T23:06:35,495 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/splittbfast' 2024-01-11T23:06:35,753 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/tbfast' 2024-01-11T23:06:35,864 adding 'witch_msa/tools/magus/tools/mafft/mafftdir/libexec/version' 2024-01-11T23:06:36,122 adding 'witch_msa/tools/magus/tools/mcl/bin/clm' 2024-01-11T23:06:36,352 adding 'witch_msa/tools/magus/tools/mcl/bin/clmformat' 2024-01-11T23:06:36,362 adding 'witch_msa/tools/magus/tools/mcl/bin/clxdo' 2024-01-11T23:06:36,566 adding 'witch_msa/tools/magus/tools/mcl/bin/mcl' 2024-01-11T23:06:36,575 adding 'witch_msa/tools/magus/tools/mcl/bin/mclblastline' 2024-01-11T23:06:36,787 adding 'witch_msa/tools/magus/tools/mcl/bin/mclcm' 2024-01-11T23:06:36,798 adding 'witch_msa/tools/magus/tools/mcl/bin/mclpipeline' 2024-01-11T23:06:37,053 adding 'witch_msa/tools/magus/tools/mcl/bin/mcx' 2024-01-11T23:06:37,279 adding 'witch_msa/tools/magus/tools/mcl/bin/mcxarray' 2024-01-11T23:06:37,491 adding 'witch_msa/tools/magus/tools/mcl/bin/mcxassemble' 2024-01-11T23:06:37,501 adding 'witch_msa/tools/magus/tools/mcl/bin/mcxdeblast' 2024-01-11T23:06:37,707 adding 'witch_msa/tools/magus/tools/mcl/bin/mcxdump' 2024-01-11T23:06:37,940 adding 'witch_msa/tools/magus/tools/mcl/bin/mcxi' 2024-01-11T23:06:38,155 adding 'witch_msa/tools/magus/tools/mcl/bin/mcxload' 2024-01-11T23:06:38,286 adding 'witch_msa/tools/magus/tools/mcl/bin/mcxmap' 2024-01-11T23:06:38,417 adding 'witch_msa/tools/magus/tools/mcl/bin/mcxrand' 2024-01-11T23:06:38,643 adding 'witch_msa/tools/magus/tools/mcl/bin/mcxsubs' 2024-01-11T23:06:38,654 adding 'witch_msa/tools/magus/tools/mlrmcl/README' 2024-01-11T23:06:38,676 adding 'witch_msa/tools/magus/tools/mlrmcl/mlrmcl' 2024-01-11T23:06:38,695 adding 'witch_msa/tools/magus/tools/mlrmcl/ncut' 2024-01-11T23:06:39,884 adding 'witch_msa/tools/magus/tools/raxmlng/raxml-ng' 2024-01-11T23:06:39,928 adding 'witch_msa-1.0.3.data/scripts/witch-msa' 2024-01-11T23:06:39,929 adding 'witch_msa-1.0.3.data/scripts/witch.py' 2024-01-11T23:06:39,936 adding 'witch_msa-1.0.3.dist-info/LICENSE' 2024-01-11T23:06:39,945 adding 'witch_msa-1.0.3.dist-info/METADATA' 2024-01-11T23:06:39,946 adding 'witch_msa-1.0.3.dist-info/WHEEL' 2024-01-11T23:06:39,948 adding 'witch_msa-1.0.3.dist-info/top_level.txt' 2024-01-11T23:06:39,951 adding 'witch_msa-1.0.3.dist-info/RECORD' 2024-01-11T23:06:40,262 removing build/bdist.linux-armv7l/wheel 2024-01-11T23:06:40,453 Building wheel for witch-msa (pyproject.toml): finished with status 'done' 2024-01-11T23:06:41,050 Created wheel for witch-msa: filename=witch_msa-1.0.3-py3-none-any.whl size=29117543 sha256=440a84378a0a3cfeb2b13eb10fbd1d017e3b35d32520d00941a364f9ed34839f 2024-01-11T23:06:41,051 Stored in directory: /tmp/pip-ephem-wheel-cache-rm9j8n5c/wheels/3d/be/4e/84fb8353c6514a6bb1298aac45ecb849e25e42c3a98190a603 2024-01-11T23:06:41,098 Successfully built witch-msa 2024-01-11T23:06:41,797 Removed build tracker: '/tmp/pip-build-tracker-_2y15nts'