2024-01-13T07:19:39,007 Created temporary directory: /tmp/pip-build-tracker-mynd71w7 2024-01-13T07:19:39,009 Initialized build tracking at /tmp/pip-build-tracker-mynd71w7 2024-01-13T07:19:39,009 Created build tracker: /tmp/pip-build-tracker-mynd71w7 2024-01-13T07:19:39,010 Entered build tracker: /tmp/pip-build-tracker-mynd71w7 2024-01-13T07:19:39,010 Created temporary directory: /tmp/pip-wheel-uufnulun 2024-01-13T07:19:39,014 Created temporary directory: /tmp/pip-ephem-wheel-cache-1l3k0g6z 2024-01-13T07:19:39,039 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-13T07:19:39,043 2 location(s) to search for versions of nextflow: 2024-01-13T07:19:39,043 * https://pypi.org/simple/nextflow/ 2024-01-13T07:19:39,043 * https://www.piwheels.org/simple/nextflow/ 2024-01-13T07:19:39,043 Fetching project page and analyzing links: https://pypi.org/simple/nextflow/ 2024-01-13T07:19:39,044 Getting page https://pypi.org/simple/nextflow/ 2024-01-13T07:19:39,046 Found index url https://pypi.org/simple/ 2024-01-13T07:19:39,261 Fetched page https://pypi.org/simple/nextflow/ as application/vnd.pypi.simple.v1+json 2024-01-13T07:19:39,263 Found link https://files.pythonhosted.org/packages/d9/3d/162f93ee2c674b19e07782850b8e1044168c3615a9e3e3a9a2d75ad45e8a/nextflow-22.10.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.1 2024-01-13T07:19:39,264 Found link https://files.pythonhosted.org/packages/0b/00/f6d3c8d84864605147aa79ec17f763fd394f9cfaded672101e3d07bc0345/nextflow-22.10.6.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.6 2024-01-13T07:19:39,265 Found link https://files.pythonhosted.org/packages/f5/e8/e0882a1aad0b30b3ac760ae69914ffe986706f12d6539a1c0a08759d0e2b/nextflow-22.10.7.tar.gz (from https://pypi.org/simple/nextflow/), version: 22.10.7 2024-01-13T07:19:39,266 Found link https://files.pythonhosted.org/packages/d5/eb/d7cd6b33724ea6c37f8dfd4ed4354a06ed66e8a87bb6c50cca26afa3d210/nextflow-23.4.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.1 2024-01-13T07:19:39,266 Found link https://files.pythonhosted.org/packages/77/eb/6f5e7d09188ac1fedc1b20c5bb3c679302cda22398c49682f8f3213565db/nextflow-23.4.2.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.2 2024-01-13T07:19:39,267 Found link https://files.pythonhosted.org/packages/37/0f/cd4e2d76402ebd60994753df846a4581fe1cd2c5c8ecfad4a0758328edf9/nextflow-23.4.3.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.3 2024-01-13T07:19:39,268 Found link https://files.pythonhosted.org/packages/7f/a1/ef4e714fdc8de1cf27f285565feea47eec4c85b96fc9063a07fe8215ef83/nextflow-23.4.4.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.4.4 2024-01-13T07:19:39,269 Found link https://files.pythonhosted.org/packages/5d/28/eb02b1a65c49e3b2dffd9d42e711e0544ee9db637cd4ca43b0c1a64e0eb4/nextflow-23.10.0.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.10.0 2024-01-13T07:19:39,269 Found link https://files.pythonhosted.org/packages/83/af/626ea17fa51a5397849f286ffb2c88e661e1498078b337287c8deee86ba6/nextflow-23.10.1.tar.gz (from https://pypi.org/simple/nextflow/), version: 23.10.1 2024-01-13T07:19:39,270 Fetching project page and analyzing links: https://www.piwheels.org/simple/nextflow/ 2024-01-13T07:19:39,271 Getting page https://www.piwheels.org/simple/nextflow/ 2024-01-13T07:19:39,272 Found index url https://www.piwheels.org/simple/ 2024-01-13T07:19:39,437 Fetched page https://www.piwheels.org/simple/nextflow/ as text/html 2024-01-13T07:19:39,440 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.10.0-py3-none-any.whl#sha256=7d68961906a1c33d39660746da229605ecefc580b066c8458ebebf96e563549d (from https://www.piwheels.org/simple/nextflow/) 2024-01-13T07:19:39,441 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.4-py3-none-any.whl#sha256=07d049d85a7b1f1772982e66a45e970378c1b3e4a0aa11e94bff54eea2facfaf (from https://www.piwheels.org/simple/nextflow/) 2024-01-13T07:19:39,441 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.3-py3-none-any.whl#sha256=1d2114b09aec49a7701bb1480ca7ce83e23acd47cdb495a709384efc2a525948 (from https://www.piwheels.org/simple/nextflow/) 2024-01-13T07:19:39,442 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.2-py3-none-any.whl#sha256=2056f24035f07ee610923e7a8ec19e52b141789365e337ccf71e27a365a68ce6 (from https://www.piwheels.org/simple/nextflow/) 2024-01-13T07:19:39,443 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-23.4.1-py3-none-any.whl#sha256=c07e0059e657c9519b9cc0b41d127157c166bf9116bacb750aa5fbf8ef9e9a55 (from https://www.piwheels.org/simple/nextflow/) 2024-01-13T07:19:39,443 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.7-py3-none-any.whl#sha256=bd32f54d735936e85cc14b26070f88d5b86f2fda68079680e58d5dcd6472ecdd (from https://www.piwheels.org/simple/nextflow/) 2024-01-13T07:19:39,444 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.6-py3-none-any.whl#sha256=10d80820a116271df8dd0c21f0373823dbf31f40715ebb305d3b85d49f39ad72 (from https://www.piwheels.org/simple/nextflow/) 2024-01-13T07:19:39,444 Skipping link: No binaries permitted for nextflow: https://www.piwheels.org/simple/nextflow/nextflow-22.10.1-py3-none-any.whl#sha256=746fe26a0a4083913632e05683071cc2fe41d7780835714a38c1d44116ff9073 (from https://www.piwheels.org/simple/nextflow/) 2024-01-13T07:19:39,445 Skipping link: not a file: https://www.piwheels.org/simple/nextflow/ 2024-01-13T07:19:39,445 Skipping link: not a file: https://pypi.org/simple/nextflow/ 2024-01-13T07:19:39,465 Given no hashes to check 1 links for project 'nextflow': discarding no candidates 2024-01-13T07:19:39,483 Collecting nextflow==23.10.1 2024-01-13T07:19:39,485 Created temporary directory: /tmp/pip-unpack-woz0q9lh 2024-01-13T07:19:39,694 Downloading nextflow-23.10.1.tar.gz (7.1 kB) 2024-01-13T07:19:39,720 Added nextflow==23.10.1 from https://files.pythonhosted.org/packages/83/af/626ea17fa51a5397849f286ffb2c88e661e1498078b337287c8deee86ba6/nextflow-23.10.1.tar.gz to build tracker '/tmp/pip-build-tracker-mynd71w7' 2024-01-13T07:19:39,721 Running setup.py (path:/tmp/pip-wheel-uufnulun/nextflow_065cdaa82009430b923ead1d18263c1e/setup.py) egg_info for package nextflow 2024-01-13T07:19:39,722 Created temporary directory: /tmp/pip-pip-egg-info-i946_krd 2024-01-13T07:19:39,723 Preparing metadata (setup.py): started 2024-01-13T07:19:39,724 Running command python setup.py egg_info 2024-01-13T07:19:40,728 running egg_info 2024-01-13T07:19:40,729 creating /tmp/pip-pip-egg-info-i946_krd/nextflow.egg-info 2024-01-13T07:19:40,754 writing /tmp/pip-pip-egg-info-i946_krd/nextflow.egg-info/PKG-INFO 2024-01-13T07:19:40,757 writing dependency_links to /tmp/pip-pip-egg-info-i946_krd/nextflow.egg-info/dependency_links.txt 2024-01-13T07:19:40,759 writing top-level names to /tmp/pip-pip-egg-info-i946_krd/nextflow.egg-info/top_level.txt 2024-01-13T07:19:40,761 writing manifest file '/tmp/pip-pip-egg-info-i946_krd/nextflow.egg-info/SOURCES.txt' 2024-01-13T07:19:40,836 reading manifest file '/tmp/pip-pip-egg-info-i946_krd/nextflow.egg-info/SOURCES.txt' 2024-01-13T07:19:40,839 writing manifest file '/tmp/pip-pip-egg-info-i946_krd/nextflow.egg-info/SOURCES.txt' 2024-01-13T07:19:40,945 Preparing metadata (setup.py): finished with status 'done' 2024-01-13T07:19:40,948 Source in /tmp/pip-wheel-uufnulun/nextflow_065cdaa82009430b923ead1d18263c1e has version 23.10.1, which satisfies requirement nextflow==23.10.1 from https://files.pythonhosted.org/packages/83/af/626ea17fa51a5397849f286ffb2c88e661e1498078b337287c8deee86ba6/nextflow-23.10.1.tar.gz 2024-01-13T07:19:40,949 Removed nextflow==23.10.1 from https://files.pythonhosted.org/packages/83/af/626ea17fa51a5397849f286ffb2c88e661e1498078b337287c8deee86ba6/nextflow-23.10.1.tar.gz from build tracker '/tmp/pip-build-tracker-mynd71w7' 2024-01-13T07:19:40,954 Created temporary directory: /tmp/pip-unpack-fxaxc23b 2024-01-13T07:19:40,955 Created temporary directory: /tmp/pip-unpack-ymh9zg7m 2024-01-13T07:19:40,957 Building wheels for collected packages: nextflow 2024-01-13T07:19:40,961 Created temporary directory: /tmp/pip-wheel-8oiqs07p 2024-01-13T07:19:40,962 Building wheel for nextflow (setup.py): started 2024-01-13T07:19:40,963 Destination directory: /tmp/pip-wheel-8oiqs07p 2024-01-13T07:19:40,963 Running command python setup.py bdist_wheel 2024-01-13T07:19:41,952 running bdist_wheel 2024-01-13T07:19:42,049 running build 2024-01-13T07:19:42,049 running build_scripts 2024-01-13T07:19:42,050 creating build 2024-01-13T07:19:42,050 creating build/scripts-3.11 2024-01-13T07:19:42,051 copying launcher/nextflow -> build/scripts-3.11 2024-01-13T07:19:42,054 changing mode of build/scripts-3.11/nextflow from 644 to 755 2024-01-13T07:19:42,079 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-01-13T07:19:42,079 !! 2024-01-13T07:19:42,080 ******************************************************************************** 2024-01-13T07:19:42,081 Please avoid running ``setup.py`` directly. 2024-01-13T07:19:42,081 Instead, use pypa/build, pypa/installer or other 2024-01-13T07:19:42,082 standards-based tools. 2024-01-13T07:19:42,082 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-01-13T07:19:42,083 ******************************************************************************** 2024-01-13T07:19:42,084 !! 2024-01-13T07:19:42,084 self.initialize_options() 2024-01-13T07:19:42,104 installing to build/bdist.linux-armv7l/wheel 2024-01-13T07:19:42,104 running install 2024-01-13T07:19:42,128 running install_egg_info 2024-01-13T07:19:42,211 running egg_info 2024-01-13T07:19:42,236 writing nextflow.egg-info/PKG-INFO 2024-01-13T07:19:42,239 writing dependency_links to nextflow.egg-info/dependency_links.txt 2024-01-13T07:19:42,241 writing top-level names to nextflow.egg-info/top_level.txt 2024-01-13T07:19:42,266 reading manifest file 'nextflow.egg-info/SOURCES.txt' 2024-01-13T07:19:42,270 writing manifest file 'nextflow.egg-info/SOURCES.txt' 2024-01-13T07:19:42,272 Copying nextflow.egg-info to build/bdist.linux-armv7l/wheel/nextflow-23.10.1-py3.11.egg-info 2024-01-13T07:19:42,280 running install_scripts 2024-01-13T07:19:42,281 creating build/bdist.linux-armv7l/wheel/nextflow-23.10.1.data 2024-01-13T07:19:42,282 creating build/bdist.linux-armv7l/wheel/nextflow-23.10.1.data/scripts 2024-01-13T07:19:42,283 copying build/scripts-3.11/nextflow -> build/bdist.linux-armv7l/wheel/nextflow-23.10.1.data/scripts 2024-01-13T07:19:42,285 changing mode of build/bdist.linux-armv7l/wheel/nextflow-23.10.1.data/scripts/nextflow to 755 2024-01-13T07:19:42,295 creating build/bdist.linux-armv7l/wheel/nextflow-23.10.1.dist-info/WHEEL 2024-01-13T07:19:42,298 creating '/tmp/pip-wheel-8oiqs07p/nextflow-23.10.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-13T07:19:42,301 adding 'nextflow-23.10.1.data/scripts/nextflow' 2024-01-13T07:19:42,303 adding 'nextflow-23.10.1.dist-info/METADATA' 2024-01-13T07:19:42,304 adding 'nextflow-23.10.1.dist-info/WHEEL' 2024-01-13T07:19:42,305 adding 'nextflow-23.10.1.dist-info/top_level.txt' 2024-01-13T07:19:42,306 adding 'nextflow-23.10.1.dist-info/RECORD' 2024-01-13T07:19:42,307 removing build/bdist.linux-armv7l/wheel 2024-01-13T07:19:42,420 Building wheel for nextflow (setup.py): finished with status 'done' 2024-01-13T07:19:42,423 Created wheel for nextflow: filename=nextflow-23.10.1-py3-none-any.whl size=7224 sha256=81573f00e62309b377e56977d79c506407a4283adeb34ab3ccf025ee1b840b79 2024-01-13T07:19:42,424 Stored in directory: /tmp/pip-ephem-wheel-cache-1l3k0g6z/wheels/c1/89/50/1bece6c65c13a18365c40aabc97b555e7ae0ecb4e2b8bdc064 2024-01-13T07:19:42,433 Successfully built nextflow 2024-01-13T07:19:42,436 Removed build tracker: '/tmp/pip-build-tracker-mynd71w7'