2024-01-15T17:15:38,529 Created temporary directory: /tmp/pip-build-tracker-mn995db6
2024-01-15T17:15:38,531 Initialized build tracking at /tmp/pip-build-tracker-mn995db6
2024-01-15T17:15:38,531 Created build tracker: /tmp/pip-build-tracker-mn995db6
2024-01-15T17:15:38,531 Entered build tracker: /tmp/pip-build-tracker-mn995db6
2024-01-15T17:15:38,532 Created temporary directory: /tmp/pip-wheel-5cjf55ia
2024-01-15T17:15:38,535 Created temporary directory: /tmp/pip-ephem-wheel-cache-tb7cyzou
2024-01-15T17:15:38,558 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-01-15T17:15:38,562 2 location(s) to search for versions of capcruncher:
2024-01-15T17:15:38,562 * https://pypi.org/simple/capcruncher/
2024-01-15T17:15:38,562 * https://www.piwheels.org/simple/capcruncher/
2024-01-15T17:15:38,563 Fetching project page and analyzing links: https://pypi.org/simple/capcruncher/
2024-01-15T17:15:38,563 Getting page https://pypi.org/simple/capcruncher/
2024-01-15T17:15:38,565 Found index url https://pypi.org/simple/
2024-01-15T17:15:38,784 Fetched page https://pypi.org/simple/capcruncher/ as application/vnd.pypi.simple.v1+json
2024-01-15T17:15:38,791   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/34/0a/9e75866768f2f383fb94a19406fc1351c2752e365607839d6e2bb1d8d84b/capcruncher-0.1.0a1-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8)
2024-01-15T17:15:38,792   Found link https://files.pythonhosted.org/packages/3c/f1/f89b867eec66701b2f41487ec19a3092f869cba76c6d15750220af30ab7b/capcruncher-0.1.0a1.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8), version: 0.1.0a1
2024-01-15T17:15:38,793   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/1d/1b/b3083fd403c5ea09c7ac18edb1a69b795ab753e1dce96d3837c6777c090a/capcruncher-0.1.0a2-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8)
2024-01-15T17:15:38,794   Found link https://files.pythonhosted.org/packages/78/43/1dbd9816f26f28c8ea8e41109f7b55f3c29216ae9ee9faf3132455ee5900/capcruncher-0.1.0a2.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8), version: 0.1.0a2
2024-01-15T17:15:38,794   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/af/21/1bd19a95d650d782bd61f0617e2ade19b8ea9dfc2583d5188cf31fc9e2ac/capcruncher-0.1.1a0-py3-none-any.whl (from https://pypi.org/simple/capcruncher/)
2024-01-15T17:15:38,795   Found link https://files.pythonhosted.org/packages/4b/58/8c4c26cb67c97bc632d4fd7df6b754a3d7d52d9224a12b5ef30f1551e18a/capcruncher-0.1.1a0.tar.gz (from https://pypi.org/simple/capcruncher/), version: 0.1.1a0
2024-01-15T17:15:38,796   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/09/3a/0d4e2559f5fcd1ea08ba4a59a2174bfa9b4e362fb6fbbeff57652bc8b43b/capcruncher-0.1.1a1-py3-none-any.whl (from https://pypi.org/simple/capcruncher/)
2024-01-15T17:15:38,797   Found link https://files.pythonhosted.org/packages/fc/38/d9f3fbb589780a7116c60af23e14e0ffec82fa966bd6fac06494df1ff972/capcruncher-0.1.1a1.tar.gz (from https://pypi.org/simple/capcruncher/), version: 0.1.1a1
2024-01-15T17:15:38,797   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/d8/b8/f378ab302aba8e011a3548bc8e12ca018dd51bae5e175f2aeac9b7023dbe/capcruncher-0.2.0-py3-none-any.whl (from https://pypi.org/simple/capcruncher/)
2024-01-15T17:15:38,798   Found link https://files.pythonhosted.org/packages/ab/85/07383d62359c33bab143b6f85173a09852963625a5c6e23bbfd5c54d81d4/capcruncher-0.2.0.tar.gz (from https://pypi.org/simple/capcruncher/), version: 0.2.0
2024-01-15T17:15:38,799   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/20/fb/21512e9e9259664564498669e39be1c06854d7b9a4b2c088d640dbaed48b/capcruncher-0.2.2-py3-none-any.whl (from https://pypi.org/simple/capcruncher/)
2024-01-15T17:15:38,799   Found link https://files.pythonhosted.org/packages/d6/8a/d499689bfadfc8c5ad88d9403619ffd62fe9169a359c304a3ef25d368b1d/capcruncher-0.2.2.tar.gz (from https://pypi.org/simple/capcruncher/), version: 0.2.2
2024-01-15T17:15:38,800   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/37/32/8d0b33d160aeec619f8cc86611ac7771733f9a300176f3b7fbc5f94dc51a/capcruncher-0.2.3-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8)
2024-01-15T17:15:38,801   Found link https://files.pythonhosted.org/packages/e7/da/78b7ae1ccdca4a9c2a0abdd16e308facc1909da2e159ce2d565c05fad639/capcruncher-0.2.3.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.8), version: 0.2.3
2024-01-15T17:15:38,802   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/26/e5/2b7ada507bb60d04dfafa0655d63edd3b82cdfb5476b8672acf0cb5477b9/capcruncher-0.3.1-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,802   Found link https://files.pythonhosted.org/packages/43/bd/2aabc1f9b8e2fae522852b4f3c8f27f42aadcf50016eb7bfcdfe83d499bb/capcruncher-0.3.1.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.1
2024-01-15T17:15:38,803   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/23/34/26f733de022f420176a15aaccb50dc49d6eac08dcf68d147f08d3abb257b/capcruncher-0.3.2-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,804   Found link https://files.pythonhosted.org/packages/b4/c4/a3c7065d7c993db2680c1303d40862031cc6e8535aca5b023ded383d4520/capcruncher-0.3.2.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.2
2024-01-15T17:15:38,804   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/80/d5/ae6f38bc4ec0724841406c0125296bad843a1ca2fe9e2dfce8bb73796ae5/capcruncher-0.3.3-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,805   Found link https://files.pythonhosted.org/packages/21/8f/8063b68decdfed76375774899994ce09bf6f2362453110d3a7e3091d0f47/capcruncher-0.3.3.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.3
2024-01-15T17:15:38,806   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/61/55/adac692b940cca0f453b760ec8c3be9b325e22afb8e8693717fcebd202c0/capcruncher-0.3.4-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,807   Found link https://files.pythonhosted.org/packages/b1/78/c98a2a4a6e62b5bd169af128129633b9e06bce32b0284b79c68808a8f0e5/capcruncher-0.3.4.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.4
2024-01-15T17:15:38,808   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/a7/b0/ed93710d654d62b661c227e5ab7cd4318633571b06cf746789710ca33465/capcruncher-0.3.5-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,808   Found link https://files.pythonhosted.org/packages/37/ea/966e9f14e18737107ed291ea6d3646f5a05e13a9566c2e70e0a7cd9ed172/capcruncher-0.3.5.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.5
2024-01-15T17:15:38,809   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/cc/da/a6eecab0a59ddc8666c9f015c4d7cd9314c786bcb2e0b0b8f13df74f9539/capcruncher-0.3.6-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,810   Found link https://files.pythonhosted.org/packages/8d/25/4ea99311a7e678a3d924cf4611164187869f203b08e6b6d528ab1109dfbf/capcruncher-0.3.6.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.6
2024-01-15T17:15:38,811   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/1d/7a/11c7343f53cea8815a85c3c2158608e0250aee9ff3b2f8e0eeea95b74d1b/capcruncher-0.3.7-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,812   Found link https://files.pythonhosted.org/packages/ab/4d/f435f1d776649aa7bf1106777eff726289fafd0d38014043a3d8e960aa2b/capcruncher-0.3.7.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.7
2024-01-15T17:15:38,812   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/cf/01/62cfbef37cac712903b33cc890c454ea831d364e68dcf37444d24a6f051f/capcruncher-0.3.8-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,813   Found link https://files.pythonhosted.org/packages/92/30/9985c63029e1168037e87fe88108693f8780b7ebaf98748d0c513ab0ec7b/capcruncher-0.3.8.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.8
2024-01-15T17:15:38,814   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/e2/5b/e50b1043d65930559c7cdb4e09605bb5c212156003cd558e298b6c975a73/capcruncher-0.3.9-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,815   Found link https://files.pythonhosted.org/packages/d7/70/159ca9fdd9b6698378aba4b4961b2110ed458e95c7c8463b67ccaa33dc07/capcruncher-0.3.9.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.9
2024-01-15T17:15:38,815   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/bf/d8/e32b566545c63c9fd0316817873d951cf004cbbd76356469011bebc78221/capcruncher-0.3.10-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,816   Found link https://files.pythonhosted.org/packages/60/79/85a4a07bb6e712f1e9ab40cdce12b4df468c4e006b3e70944be6439c176e/capcruncher-0.3.10.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.10
2024-01-15T17:15:38,817   Skipping link: No binaries permitted for capcruncher: https://files.pythonhosted.org/packages/f7/b9/24ea26f900c215ca75ecc99b19de23faeb5f5e339b1a6c9780db973de4d8/capcruncher-0.3.11-py3-none-any.whl (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:38,817   Found link https://files.pythonhosted.org/packages/91/85/8c994a83bfcd342d51c151a2962eb9b1fcb53842b609e96f44f0e60b1530/capcruncher-0.3.11.tar.gz (from https://pypi.org/simple/capcruncher/) (requires-python:>=3.10), version: 0.3.11
2024-01-15T17:15:38,818 Fetching project page and analyzing links: https://www.piwheels.org/simple/capcruncher/
2024-01-15T17:15:38,819 Getting page https://www.piwheels.org/simple/capcruncher/
2024-01-15T17:15:38,820 Found index url https://www.piwheels.org/simple/
2024-01-15T17:15:39,015 Fetched page https://www.piwheels.org/simple/capcruncher/ as text/html
2024-01-15T17:15:39,021   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.10-py3-none-any.whl#sha256=36d7307d62765993ae79d27bcc75f555a2e4baf5b187518f3968ec734022ebbc (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,022   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.9-py3-none-any.whl#sha256=a22c5ccb847b8f599c8b36453403fc0d9dcd030731b1928f46239aeb3ee594f6 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,022   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.8-py3-none-any.whl#sha256=6448c954c95d26f5e5c9ee3a3df317e2bb9229ef4723270838b49876f2fe0573 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,023   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.7-py3-none-any.whl#sha256=d15704bfb0f2dc274bbc338b3a0f85b92bb348467d04d6c6a91c00614f643ab6 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,024   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.6-py3-none-any.whl#sha256=23a2d1c72b352805d9f9be1e5a4e44c51548843db7f756423e2b15b817a5c626 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,025   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.5-py3-none-any.whl#sha256=503c6a297520994543673dade8d1f543945f4696ee680a184d3f998ca2896c5b (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,025   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.4-py3-none-any.whl#sha256=1f430b5ce16f4b15f8b8c7eae415267929912ca0a78616fde3f593f9d458918e (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,025   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.3-py3-none-any.whl#sha256=a622eec10ed86905ffdc0d9696093c93ede9ae0280eb0979727ed05b78c6aeed (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,026   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.2-py3-none-any.whl#sha256=cb9bbb6e602e5e11dcbac280be5520518f0110c58eb9bc7937644b956c455a02 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,026   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.3.1-py3-none-any.whl#sha256=010cc17949484bec95ba588bf89f30d450d6476b8e7c612e14f32270db999b52 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.10)
2024-01-15T17:15:39,027   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.2.3-py3-none-any.whl#sha256=3640a41566ec698430601c7ee8ff373d698ad995981fcb1564072cbdaadeaa70 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.8)
2024-01-15T17:15:39,027   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.2.2-py3-none-any.whl#sha256=696271de6a0cfb479ebe5c059b46015c0b54a4883b28fac6d3f60d3f10360694 (from https://www.piwheels.org/simple/capcruncher/)
2024-01-15T17:15:39,028   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.2.0-py3-none-any.whl#sha256=a376e09af30f629484777d94d245a0a18cdee37e332344294623f74a218de161 (from https://www.piwheels.org/simple/capcruncher/)
2024-01-15T17:15:39,028   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.1.1a1-py3-none-any.whl#sha256=45ad47d1025882de7d3ae2436f95d9c690fb55f4ad3320a464754782dd2a9ce8 (from https://www.piwheels.org/simple/capcruncher/)
2024-01-15T17:15:39,029   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.1.1a0-py3-none-any.whl#sha256=33582eed6498ac35fff342bc97adfeec48d012dca74e99a13b6c8ed596465d0d (from https://www.piwheels.org/simple/capcruncher/)
2024-01-15T17:15:39,030   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.1.0a2-py3-none-any.whl#sha256=a9cad04a0fa53e9864f02ac8641b704ba78bd0da1a8d83c5e84199e7ae183222 (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.8)
2024-01-15T17:15:39,030   Skipping link: No binaries permitted for capcruncher: https://www.piwheels.org/simple/capcruncher/capcruncher-0.1.0a1-py3-none-any.whl#sha256=8d0852e344db844525d67d074e33a0880f102073b0bdc5d77c2c3bd498ffee5b (from https://www.piwheels.org/simple/capcruncher/) (requires-python:>=3.8)
2024-01-15T17:15:39,031 Skipping link: not a file: https://www.piwheels.org/simple/capcruncher/
2024-01-15T17:15:39,031 Skipping link: not a file: https://pypi.org/simple/capcruncher/
2024-01-15T17:15:39,052 Given no hashes to check 1 links for project 'capcruncher': discarding no candidates
2024-01-15T17:15:39,070 Collecting capcruncher==0.3.11
2024-01-15T17:15:39,072   Created temporary directory: /tmp/pip-unpack-w2xt2ntv
2024-01-15T17:15:39,381   Downloading capcruncher-0.3.11.tar.gz (84.8 MB)
2024-01-15T17:16:01,240   Added capcruncher==0.3.11 from https://files.pythonhosted.org/packages/91/85/8c994a83bfcd342d51c151a2962eb9b1fcb53842b609e96f44f0e60b1530/capcruncher-0.3.11.tar.gz to build tracker '/tmp/pip-build-tracker-mn995db6'
2024-01-15T17:16:01,248   Created temporary directory: /tmp/pip-build-env-t7brw516
2024-01-15T17:16:01,253   Installing build dependencies: started
2024-01-15T17:16:01,254   Running command pip subprocess to install build dependencies
2024-01-15T17:16:02,453   Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-01-15T17:16:02,997   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-01-15T17:16:04,456   Collecting setuptools>=61.0
2024-01-15T17:16:04,474     Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl (819 kB)
2024-01-15T17:16:04,698   Collecting wheel
2024-01-15T17:16:04,730     Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB)
2024-01-15T17:16:05,018   Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2)
2024-01-15T17:16:05,031     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB)
2024-01-15T17:16:05,371   Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2)
2024-01-15T17:16:05,384     Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB)
2024-01-15T17:16:05,492   Collecting typing-extensions (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2)
2024-01-15T17:16:05,505     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.9.0-py3-none-any.whl (32 kB)
2024-01-15T17:16:07,999   Installing collected packages: wheel, typing-extensions, setuptools, packaging, setuptools_scm
2024-01-15T17:16:08,217     Creating /tmp/pip-build-env-t7brw516/overlay/local/bin
2024-01-15T17:16:08,219     changing mode of /tmp/pip-build-env-t7brw516/overlay/local/bin/wheel to 755
2024-01-15T17:16:10,836   Successfully installed packaging-23.2 setuptools-69.0.3 setuptools_scm-8.0.4 typing-extensions-4.9.0 wheel-0.42.0

2024-01-15T17:16:11,108   [notice] A new release of pip is available: 23.3.1 -> 23.3.2
2024-01-15T17:16:11,109   [notice] To update, run: python3 -m pip install --upgrade pip
2024-01-15T17:16:11,391   Installing build dependencies: finished with status 'done'
2024-01-15T17:16:11,395   Getting requirements to build wheel: started
2024-01-15T17:16:11,396   Running command Getting requirements to build wheel
2024-01-15T17:16:12,338   running egg_info
2024-01-15T17:16:12,343   writing capcruncher.egg-info/PKG-INFO
2024-01-15T17:16:12,361   writing dependency_links to capcruncher.egg-info/dependency_links.txt
2024-01-15T17:16:12,362   writing entry points to capcruncher.egg-info/entry_points.txt
2024-01-15T17:16:12,372   writing requirements to capcruncher.egg-info/requires.txt
2024-01-15T17:16:12,373   writing top-level names to capcruncher.egg-info/top_level.txt
2024-01-15T17:16:12,425   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-01-15T17:16:12,428   reading manifest file 'capcruncher.egg-info/SOURCES.txt'
2024-01-15T17:16:12,436   reading manifest template 'MANIFEST.in'
2024-01-15T17:16:12,467   adding license file 'LICENSE'
2024-01-15T17:16:12,476   writing manifest file 'capcruncher.egg-info/SOURCES.txt'
2024-01-15T17:16:12,599   Getting requirements to build wheel: finished with status 'done'
2024-01-15T17:16:12,613   Created temporary directory: /tmp/pip-modern-metadata-k0ci5urk
2024-01-15T17:16:12,615   Preparing metadata (pyproject.toml): started
2024-01-15T17:16:12,617   Running command Preparing metadata (pyproject.toml)
2024-01-15T17:16:13,470   running dist_info
2024-01-15T17:16:13,476   creating /tmp/pip-modern-metadata-k0ci5urk/capcruncher.egg-info
2024-01-15T17:16:13,481   writing /tmp/pip-modern-metadata-k0ci5urk/capcruncher.egg-info/PKG-INFO
2024-01-15T17:16:13,498   writing dependency_links to /tmp/pip-modern-metadata-k0ci5urk/capcruncher.egg-info/dependency_links.txt
2024-01-15T17:16:13,499   writing entry points to /tmp/pip-modern-metadata-k0ci5urk/capcruncher.egg-info/entry_points.txt
2024-01-15T17:16:13,508   writing requirements to /tmp/pip-modern-metadata-k0ci5urk/capcruncher.egg-info/requires.txt
2024-01-15T17:16:13,509   writing top-level names to /tmp/pip-modern-metadata-k0ci5urk/capcruncher.egg-info/top_level.txt
2024-01-15T17:16:13,510   writing manifest file '/tmp/pip-modern-metadata-k0ci5urk/capcruncher.egg-info/SOURCES.txt'
2024-01-15T17:16:13,555   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-01-15T17:16:13,558   reading manifest file '/tmp/pip-modern-metadata-k0ci5urk/capcruncher.egg-info/SOURCES.txt'
2024-01-15T17:16:13,560   reading manifest template 'MANIFEST.in'
2024-01-15T17:16:13,588   adding license file 'LICENSE'
2024-01-15T17:16:13,592   writing manifest file '/tmp/pip-modern-metadata-k0ci5urk/capcruncher.egg-info/SOURCES.txt'
2024-01-15T17:16:13,593   creating '/tmp/pip-modern-metadata-k0ci5urk/capcruncher-0.3.11.dist-info'
2024-01-15T17:16:13,766   Preparing metadata (pyproject.toml): finished with status 'done'
2024-01-15T17:16:13,778   Source in /tmp/pip-wheel-5cjf55ia/capcruncher_e1e2c99d84ad4962ab787d87331a6362 has version 0.3.11, which satisfies requirement capcruncher==0.3.11 from https://files.pythonhosted.org/packages/91/85/8c994a83bfcd342d51c151a2962eb9b1fcb53842b609e96f44f0e60b1530/capcruncher-0.3.11.tar.gz
2024-01-15T17:16:13,779   Removed capcruncher==0.3.11 from https://files.pythonhosted.org/packages/91/85/8c994a83bfcd342d51c151a2962eb9b1fcb53842b609e96f44f0e60b1530/capcruncher-0.3.11.tar.gz from build tracker '/tmp/pip-build-tracker-mn995db6'
2024-01-15T17:16:13,799 Created temporary directory: /tmp/pip-unpack-v4oui8u9
2024-01-15T17:16:13,800 Created temporary directory: /tmp/pip-unpack-ksz0qcs0
2024-01-15T17:16:13,920 Building wheels for collected packages: capcruncher
2024-01-15T17:16:13,924   Created temporary directory: /tmp/pip-wheel-9o1kwpoq
2024-01-15T17:16:13,925   Destination directory: /tmp/pip-wheel-9o1kwpoq
2024-01-15T17:16:13,927   Building wheel for capcruncher (pyproject.toml): started
2024-01-15T17:16:13,929   Running command Building wheel for capcruncher (pyproject.toml)
2024-01-15T17:16:14,766   running bdist_wheel
2024-01-15T17:16:14,788   running build
2024-01-15T17:16:14,789   running build_py
2024-01-15T17:16:14,794   creating build
2024-01-15T17:16:14,795   creating build/lib
2024-01-15T17:16:14,796   creating build/lib/capcruncher
2024-01-15T17:16:14,797   copying capcruncher/_version.py -> build/lib/capcruncher
2024-01-15T17:16:14,799   copying capcruncher/utils.py -> build/lib/capcruncher
2024-01-15T17:16:14,801   copying capcruncher/__init__.py -> build/lib/capcruncher
2024-01-15T17:16:14,803   creating build/lib/capcruncher/api
2024-01-15T17:16:14,805   copying capcruncher/api/deduplicate.py -> build/lib/capcruncher/api
2024-01-15T17:16:14,807   copying capcruncher/api/plotting.py -> build/lib/capcruncher/api
2024-01-15T17:16:14,810   copying capcruncher/api/storage.py -> build/lib/capcruncher/api
2024-01-15T17:16:14,812   copying capcruncher/api/filter.py -> build/lib/capcruncher/api
2024-01-15T17:16:14,815   copying capcruncher/api/statistics.py -> build/lib/capcruncher/api
2024-01-15T17:16:14,817   copying capcruncher/api/pileup.py -> build/lib/capcruncher/api
2024-01-15T17:16:14,820   copying capcruncher/api/io.py -> build/lib/capcruncher/api
2024-01-15T17:16:14,822   copying capcruncher/api/annotate.py -> build/lib/capcruncher/api
2024-01-15T17:16:14,824   copying capcruncher/api/__init__.py -> build/lib/capcruncher/api
2024-01-15T17:16:14,827   creating build/lib/capcruncher/cli
2024-01-15T17:16:14,828   copying capcruncher/cli/cli_fastq.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,830   copying capcruncher/cli/interactions_store.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,832   copying capcruncher/cli/interactions_differential.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,835   copying capcruncher/cli/alignments_filter.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,837   copying capcruncher/cli/interactions_deduplicate.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,838   copying capcruncher/cli/fastq_digest.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,840   copying capcruncher/cli/interactions_count.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,842   copying capcruncher/cli/cli_plot.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,843   copying capcruncher/cli/cli_utilities.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,845   copying capcruncher/cli/cli_interactions.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,848   copying capcruncher/cli/cli_pipeline.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,849   copying capcruncher/cli/fastq_deduplicate.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,851   copying capcruncher/cli/cli_genome.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,853   copying capcruncher/cli/genome_digest.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,854   copying capcruncher/cli/interactions_compare.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,856   copying capcruncher/cli/cli_alignments.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,858   copying capcruncher/cli/__init__.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,860   copying capcruncher/cli/interactions_pileup.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,862   copying capcruncher/cli/fastq_split.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,864   copying capcruncher/cli/alignments_annotate.py -> build/lib/capcruncher/cli
2024-01-15T17:16:14,866   creating build/lib/capcruncher/pipeline
2024-01-15T17:16:14,867   copying capcruncher/pipeline/utils.py -> build/lib/capcruncher/pipeline
2024-01-15T17:16:14,872   creating build/lib/capcruncher/pipeline/workflow
2024-01-15T17:16:14,872   creating build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,873   copying capcruncher/pipeline/workflow/scripts/extract_trimming_data.py -> build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,875   copying capcruncher/pipeline/workflow/scripts/remove_duplicate_coordinates.py -> build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,877   copying capcruncher/pipeline/workflow/scripts/identify_viewpoints_with_interactions.py -> build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,878   copying capcruncher/pipeline/workflow/scripts/extract_flash_data.py -> build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,880   copying capcruncher/pipeline/workflow/scripts/count_identified_viewpoints.py -> build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,882   copying capcruncher/pipeline/workflow/scripts/validation_confirm_annotated_viewpoints_present.py -> build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,883   copying capcruncher/pipeline/workflow/scripts/validation_check_n_bins_per_viewpoint.py -> build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,885   copying capcruncher/pipeline/workflow/scripts/plot.py -> build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,887   copying capcruncher/pipeline/workflow/scripts/make_ucsc_hub.py -> build/lib/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:14,889   creating build/lib/capcruncher/pipeline/workflow/report
2024-01-15T17:16:14,890   copying capcruncher/pipeline/workflow/report/make_report.py -> build/lib/capcruncher/pipeline/workflow/report
2024-01-15T17:16:14,894   running egg_info
2024-01-15T17:16:14,899   writing capcruncher.egg-info/PKG-INFO
2024-01-15T17:16:14,916   writing dependency_links to capcruncher.egg-info/dependency_links.txt
2024-01-15T17:16:14,918   writing entry points to capcruncher.egg-info/entry_points.txt
2024-01-15T17:16:14,927   writing requirements to capcruncher.egg-info/requires.txt
2024-01-15T17:16:14,928   writing top-level names to capcruncher.egg-info/top_level.txt
2024-01-15T17:16:14,963   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-01-15T17:16:14,966   reading manifest file 'capcruncher.egg-info/SOURCES.txt'
2024-01-15T17:16:14,972   reading manifest template 'MANIFEST.in'
2024-01-15T17:16:15,007   adding license file 'LICENSE'
2024-01-15T17:16:15,015   writing manifest file 'capcruncher.egg-info/SOURCES.txt'
2024-01-15T17:16:15,028   creating build/lib/capcruncher/data
2024-01-15T17:16:15,029   copying capcruncher/data/logo.txt -> build/lib/capcruncher/data
2024-01-15T17:16:15,032   creating build/lib/capcruncher/pipeline/config
2024-01-15T17:16:15,032   copying capcruncher/pipeline/config/cookiecutter.json -> build/lib/capcruncher/pipeline/config
2024-01-15T17:16:15,034   creating build/lib/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}
2024-01-15T17:16:15,035   copying capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}/capcruncher_config.yml -> build/lib/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}
2024-01-15T17:16:15,038   copying capcruncher/pipeline/workflow/Snakefile -> build/lib/capcruncher/pipeline/workflow
2024-01-15T17:16:15,040   creating build/lib/capcruncher/pipeline/workflow/data
2024-01-15T17:16:15,041   copying capcruncher/pipeline/workflow/data/annotation_defaults.json -> build/lib/capcruncher/pipeline/workflow/data
2024-01-15T17:16:15,043   creating build/lib/capcruncher/pipeline/workflow/envs
2024-01-15T17:16:15,044   copying capcruncher/pipeline/workflow/envs/environment.yml -> build/lib/capcruncher/pipeline/workflow/envs
2024-01-15T17:16:15,046   copying capcruncher/pipeline/workflow/report/capcruncher_report.qmd -> build/lib/capcruncher/pipeline/workflow/report
2024-01-15T17:16:15,049   copying capcruncher/pipeline/workflow/report/report_text.yml -> build/lib/capcruncher/pipeline/workflow/report
2024-01-15T17:16:15,050   creating build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,051   copying capcruncher/pipeline/workflow/rules/align.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,053   copying capcruncher/pipeline/workflow/rules/annotate.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,055   copying capcruncher/pipeline/workflow/rules/compare.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,058   copying capcruncher/pipeline/workflow/rules/digest.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,060   copying capcruncher/pipeline/workflow/rules/fastq.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,062   copying capcruncher/pipeline/workflow/rules/filter.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,065   copying capcruncher/pipeline/workflow/rules/optional.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,067   copying capcruncher/pipeline/workflow/rules/pileup.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,069   copying capcruncher/pipeline/workflow/rules/qc.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,071   copying capcruncher/pipeline/workflow/rules/statistics.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,074   copying capcruncher/pipeline/workflow/rules/visualise.smk -> build/lib/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,076   creating build/lib/capcruncher/pipeline/workflow/envs/profiles
2024-01-15T17:16:15,077   creating build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_singularity
2024-01-15T17:16:15,078   copying capcruncher/pipeline/workflow/envs/profiles/profile_singularity/config.yaml -> build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_singularity
2024-01-15T17:16:15,080   creating build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity
2024-01-15T17:16:15,081   copying capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity/config.yaml -> build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity
2024-01-15T17:16:15,096   installing to build/bdist.linux-armv7l/wheel
2024-01-15T17:16:15,097   running install
2024-01-15T17:16:15,121   running install_lib
2024-01-15T17:16:15,126   creating build/bdist.linux-armv7l
2024-01-15T17:16:15,127   creating build/bdist.linux-armv7l/wheel
2024-01-15T17:16:15,128   creating build/bdist.linux-armv7l/wheel/capcruncher
2024-01-15T17:16:15,129   creating build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,130   copying build/lib/capcruncher/api/deduplicate.py -> build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,133   copying build/lib/capcruncher/api/plotting.py -> build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,135   copying build/lib/capcruncher/api/storage.py -> build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,138   copying build/lib/capcruncher/api/filter.py -> build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,140   copying build/lib/capcruncher/api/statistics.py -> build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,142   copying build/lib/capcruncher/api/pileup.py -> build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,145   copying build/lib/capcruncher/api/io.py -> build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,147   copying build/lib/capcruncher/api/annotate.py -> build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,149   copying build/lib/capcruncher/api/__init__.py -> build/bdist.linux-armv7l/wheel/capcruncher/api
2024-01-15T17:16:15,151   creating build/bdist.linux-armv7l/wheel/capcruncher/data
2024-01-15T17:16:15,152   copying build/lib/capcruncher/data/logo.txt -> build/bdist.linux-armv7l/wheel/capcruncher/data
2024-01-15T17:16:15,154   copying build/lib/capcruncher/_version.py -> build/bdist.linux-armv7l/wheel/capcruncher
2024-01-15T17:16:15,156   creating build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,157   copying build/lib/capcruncher/cli/cli_fastq.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,159   copying build/lib/capcruncher/cli/interactions_store.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,161   copying build/lib/capcruncher/cli/interactions_differential.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,164   copying build/lib/capcruncher/cli/alignments_filter.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,166   copying build/lib/capcruncher/cli/interactions_deduplicate.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,168   copying build/lib/capcruncher/cli/fastq_digest.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,169   copying build/lib/capcruncher/cli/interactions_count.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,171   copying build/lib/capcruncher/cli/cli_plot.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,173   copying build/lib/capcruncher/cli/cli_utilities.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,175   copying build/lib/capcruncher/cli/cli_interactions.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,178   copying build/lib/capcruncher/cli/cli_pipeline.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,180   copying build/lib/capcruncher/cli/fastq_deduplicate.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,182   copying build/lib/capcruncher/cli/cli_genome.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,184   copying build/lib/capcruncher/cli/genome_digest.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,185   copying build/lib/capcruncher/cli/interactions_compare.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,188   copying build/lib/capcruncher/cli/cli_alignments.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,190   copying build/lib/capcruncher/cli/__init__.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,191   copying build/lib/capcruncher/cli/interactions_pileup.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,193   copying build/lib/capcruncher/cli/fastq_split.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,195   copying build/lib/capcruncher/cli/alignments_annotate.py -> build/bdist.linux-armv7l/wheel/capcruncher/cli
2024-01-15T17:16:15,198   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline
2024-01-15T17:16:15,199   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/config
2024-01-15T17:16:15,200   copying build/lib/capcruncher/pipeline/config/cookiecutter.json -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/config
2024-01-15T17:16:15,202   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}
2024-01-15T17:16:15,203   copying build/lib/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}/capcruncher_config.yml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}
2024-01-15T17:16:15,206   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow
2024-01-15T17:16:15,208   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/data
2024-01-15T17:16:15,208   copying build/lib/capcruncher/pipeline/workflow/data/annotation_defaults.json -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/data
2024-01-15T17:16:15,211   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs
2024-01-15T17:16:15,212   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles
2024-01-15T17:16:15,214   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles/profile_singularity
2024-01-15T17:16:15,215   copying build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_singularity/config.yaml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles/profile_singularity
2024-01-15T17:16:15,217   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity
2024-01-15T17:16:15,218   copying build/lib/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity/config.yaml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity
2024-01-15T17:16:15,220   copying build/lib/capcruncher/pipeline/workflow/envs/environment.yml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/envs
2024-01-15T17:16:15,221   copying build/lib/capcruncher/pipeline/workflow/Snakefile -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow
2024-01-15T17:16:15,224   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,225   copying build/lib/capcruncher/pipeline/workflow/scripts/extract_trimming_data.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,227   copying build/lib/capcruncher/pipeline/workflow/scripts/remove_duplicate_coordinates.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,228   copying build/lib/capcruncher/pipeline/workflow/scripts/identify_viewpoints_with_interactions.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,230   copying build/lib/capcruncher/pipeline/workflow/scripts/extract_flash_data.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,232   copying build/lib/capcruncher/pipeline/workflow/scripts/count_identified_viewpoints.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,234   copying build/lib/capcruncher/pipeline/workflow/scripts/validation_confirm_annotated_viewpoints_present.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,235   copying build/lib/capcruncher/pipeline/workflow/scripts/validation_check_n_bins_per_viewpoint.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,237   copying build/lib/capcruncher/pipeline/workflow/scripts/plot.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,239   copying build/lib/capcruncher/pipeline/workflow/scripts/make_ucsc_hub.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/scripts
2024-01-15T17:16:15,241   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/report
2024-01-15T17:16:15,242   copying build/lib/capcruncher/pipeline/workflow/report/capcruncher_report.qmd -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/report
2024-01-15T17:16:15,245   copying build/lib/capcruncher/pipeline/workflow/report/make_report.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/report
2024-01-15T17:16:15,247   copying build/lib/capcruncher/pipeline/workflow/report/report_text.yml -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/report
2024-01-15T17:16:15,249   creating build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,250   copying build/lib/capcruncher/pipeline/workflow/rules/fastq.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,253   copying build/lib/capcruncher/pipeline/workflow/rules/digest.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,254   copying build/lib/capcruncher/pipeline/workflow/rules/optional.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,256   copying build/lib/capcruncher/pipeline/workflow/rules/filter.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,258   copying build/lib/capcruncher/pipeline/workflow/rules/annotate.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,260   copying build/lib/capcruncher/pipeline/workflow/rules/statistics.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,262   copying build/lib/capcruncher/pipeline/workflow/rules/align.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,264   copying build/lib/capcruncher/pipeline/workflow/rules/qc.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,266   copying build/lib/capcruncher/pipeline/workflow/rules/visualise.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,267   copying build/lib/capcruncher/pipeline/workflow/rules/pileup.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,270   copying build/lib/capcruncher/pipeline/workflow/rules/compare.smk -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline/workflow/rules
2024-01-15T17:16:15,272   copying build/lib/capcruncher/pipeline/utils.py -> build/bdist.linux-armv7l/wheel/capcruncher/pipeline
2024-01-15T17:16:15,274   copying build/lib/capcruncher/utils.py -> build/bdist.linux-armv7l/wheel/capcruncher
2024-01-15T17:16:15,277   copying build/lib/capcruncher/__init__.py -> build/bdist.linux-armv7l/wheel/capcruncher
2024-01-15T17:16:15,279   running install_egg_info
2024-01-15T17:16:15,284   Copying capcruncher.egg-info to build/bdist.linux-armv7l/wheel/capcruncher-0.3.11-py3.11.egg-info
2024-01-15T17:16:15,301   running install_scripts
2024-01-15T17:16:15,347   creating build/bdist.linux-armv7l/wheel/capcruncher-0.3.11.dist-info/WHEEL
2024-01-15T17:16:15,350   creating '/tmp/pip-wheel-9o1kwpoq/.tmp-wuu2ssu6/capcruncher-0.3.11-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-01-15T17:16:15,353   adding 'capcruncher/__init__.py'
2024-01-15T17:16:15,355   adding 'capcruncher/_version.py'
2024-01-15T17:16:15,358   adding 'capcruncher/utils.py'
2024-01-15T17:16:15,361   adding 'capcruncher/api/__init__.py'
2024-01-15T17:16:15,364   adding 'capcruncher/api/annotate.py'
2024-01-15T17:16:15,366   adding 'capcruncher/api/deduplicate.py'
2024-01-15T17:16:15,372   adding 'capcruncher/api/filter.py'
2024-01-15T17:16:15,375   adding 'capcruncher/api/io.py'
2024-01-15T17:16:15,379   adding 'capcruncher/api/pileup.py'
2024-01-15T17:16:15,386   adding 'capcruncher/api/plotting.py'
2024-01-15T17:16:15,388   adding 'capcruncher/api/statistics.py'
2024-01-15T17:16:15,391   adding 'capcruncher/api/storage.py'
2024-01-15T17:16:15,393   adding 'capcruncher/cli/__init__.py'
2024-01-15T17:16:15,394   adding 'capcruncher/cli/alignments_annotate.py'
2024-01-15T17:16:15,396   adding 'capcruncher/cli/alignments_filter.py'
2024-01-15T17:16:15,398   adding 'capcruncher/cli/cli_alignments.py'
2024-01-15T17:16:15,399   adding 'capcruncher/cli/cli_fastq.py'
2024-01-15T17:16:15,400   adding 'capcruncher/cli/cli_genome.py'
2024-01-15T17:16:15,402   adding 'capcruncher/cli/cli_interactions.py'
2024-01-15T17:16:15,404   adding 'capcruncher/cli/cli_pipeline.py'
2024-01-15T17:16:15,405   adding 'capcruncher/cli/cli_plot.py'
2024-01-15T17:16:15,407   adding 'capcruncher/cli/cli_utilities.py'
2024-01-15T17:16:15,408   adding 'capcruncher/cli/fastq_deduplicate.py'
2024-01-15T17:16:15,409   adding 'capcruncher/cli/fastq_digest.py'
2024-01-15T17:16:15,411   adding 'capcruncher/cli/fastq_split.py'
2024-01-15T17:16:15,412   adding 'capcruncher/cli/genome_digest.py'
2024-01-15T17:16:15,414   adding 'capcruncher/cli/interactions_compare.py'
2024-01-15T17:16:15,415   adding 'capcruncher/cli/interactions_count.py'
2024-01-15T17:16:15,416   adding 'capcruncher/cli/interactions_deduplicate.py'
2024-01-15T17:16:15,418   adding 'capcruncher/cli/interactions_differential.py'
2024-01-15T17:16:15,420   adding 'capcruncher/cli/interactions_pileup.py'
2024-01-15T17:16:15,421   adding 'capcruncher/cli/interactions_store.py'
2024-01-15T17:16:15,423   adding 'capcruncher/data/logo.txt'
2024-01-15T17:16:15,426   adding 'capcruncher/pipeline/utils.py'
2024-01-15T17:16:15,428   adding 'capcruncher/pipeline/config/cookiecutter.json'
2024-01-15T17:16:15,430   adding 'capcruncher/pipeline/config/{{cookiecutter.date}}_{{cookiecutter.__project_id}}_{{cookiecutter.__assay}}/capcruncher_config.yml'
2024-01-15T17:16:15,432   adding 'capcruncher/pipeline/workflow/Snakefile'
2024-01-15T17:16:15,434   adding 'capcruncher/pipeline/workflow/data/annotation_defaults.json'
2024-01-15T17:16:15,435   adding 'capcruncher/pipeline/workflow/envs/environment.yml'
2024-01-15T17:16:15,437   adding 'capcruncher/pipeline/workflow/envs/profiles/profile_drmaa_singularity/config.yaml'
2024-01-15T17:16:15,439   adding 'capcruncher/pipeline/workflow/envs/profiles/profile_singularity/config.yaml'
2024-01-15T17:16:15,442   adding 'capcruncher/pipeline/workflow/report/capcruncher_report.qmd'
2024-01-15T17:16:15,444   adding 'capcruncher/pipeline/workflow/report/make_report.py'
2024-01-15T17:16:15,445   adding 'capcruncher/pipeline/workflow/report/report_text.yml'
2024-01-15T17:16:15,447   adding 'capcruncher/pipeline/workflow/rules/align.smk'
2024-01-15T17:16:15,448   adding 'capcruncher/pipeline/workflow/rules/annotate.smk'
2024-01-15T17:16:15,450   adding 'capcruncher/pipeline/workflow/rules/compare.smk'
2024-01-15T17:16:15,451   adding 'capcruncher/pipeline/workflow/rules/digest.smk'
2024-01-15T17:16:15,453   adding 'capcruncher/pipeline/workflow/rules/fastq.smk'
2024-01-15T17:16:15,454   adding 'capcruncher/pipeline/workflow/rules/filter.smk'
2024-01-15T17:16:15,456   adding 'capcruncher/pipeline/workflow/rules/optional.smk'
2024-01-15T17:16:15,457   adding 'capcruncher/pipeline/workflow/rules/pileup.smk'
2024-01-15T17:16:15,458   adding 'capcruncher/pipeline/workflow/rules/qc.smk'
2024-01-15T17:16:15,460   adding 'capcruncher/pipeline/workflow/rules/statistics.smk'
2024-01-15T17:16:15,461   adding 'capcruncher/pipeline/workflow/rules/visualise.smk'
2024-01-15T17:16:15,463   adding 'capcruncher/pipeline/workflow/scripts/count_identified_viewpoints.py'
2024-01-15T17:16:15,464   adding 'capcruncher/pipeline/workflow/scripts/extract_flash_data.py'
2024-01-15T17:16:15,465   adding 'capcruncher/pipeline/workflow/scripts/extract_trimming_data.py'
2024-01-15T17:16:15,466   adding 'capcruncher/pipeline/workflow/scripts/identify_viewpoints_with_interactions.py'
2024-01-15T17:16:15,467   adding 'capcruncher/pipeline/workflow/scripts/make_ucsc_hub.py'
2024-01-15T17:16:15,469   adding 'capcruncher/pipeline/workflow/scripts/plot.py'
2024-01-15T17:16:15,470   adding 'capcruncher/pipeline/workflow/scripts/remove_duplicate_coordinates.py'
2024-01-15T17:16:15,471   adding 'capcruncher/pipeline/workflow/scripts/validation_check_n_bins_per_viewpoint.py'
2024-01-15T17:16:15,472   adding 'capcruncher/pipeline/workflow/scripts/validation_confirm_annotated_viewpoints_present.py'
2024-01-15T17:16:15,479   adding 'capcruncher-0.3.11.dist-info/LICENSE'
2024-01-15T17:16:15,487   adding 'capcruncher-0.3.11.dist-info/METADATA'
2024-01-15T17:16:15,488   adding 'capcruncher-0.3.11.dist-info/WHEEL'
2024-01-15T17:16:15,489   adding 'capcruncher-0.3.11.dist-info/entry_points.txt'
2024-01-15T17:16:15,490   adding 'capcruncher-0.3.11.dist-info/top_level.txt'
2024-01-15T17:16:15,491   adding 'capcruncher-0.3.11.dist-info/RECORD'
2024-01-15T17:16:15,495   removing build/bdist.linux-armv7l/wheel
2024-01-15T17:16:15,642   Building wheel for capcruncher (pyproject.toml): finished with status 'done'
2024-01-15T17:16:15,649   Created wheel for capcruncher: filename=capcruncher-0.3.11-py3-none-any.whl size=150565 sha256=3c6798bc7618c3ef73a57f4a59d5206091b118730220016909947c7c546300f2
2024-01-15T17:16:15,650   Stored in directory: /tmp/pip-ephem-wheel-cache-tb7cyzou/wheels/50/75/4e/1b6774a0a0b1d6f8b2259361e3533939b28cbfd0f71628f34b
2024-01-15T17:16:15,687 Successfully built capcruncher
2024-01-15T17:16:15,694 Removed build tracker: '/tmp/pip-build-tracker-mn995db6'