2024-01-17T13:10:35,639 Created temporary directory: /tmp/pip-build-tracker-u4ryai8h 2024-01-17T13:10:35,642 Initialized build tracking at /tmp/pip-build-tracker-u4ryai8h 2024-01-17T13:10:35,643 Created build tracker: /tmp/pip-build-tracker-u4ryai8h 2024-01-17T13:10:35,643 Entered build tracker: /tmp/pip-build-tracker-u4ryai8h 2024-01-17T13:10:35,644 Created temporary directory: /tmp/pip-wheel-txek2605 2024-01-17T13:10:35,655 Created temporary directory: /tmp/pip-ephem-wheel-cache-iajxibql 2024-01-17T13:10:35,709 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-17T13:10:35,723 2 location(s) to search for versions of crispector2: 2024-01-17T13:10:35,723 * https://pypi.org/simple/crispector2/ 2024-01-17T13:10:35,723 * https://www.piwheels.org/simple/crispector2/ 2024-01-17T13:10:35,724 Fetching project page and analyzing links: https://pypi.org/simple/crispector2/ 2024-01-17T13:10:35,725 Getting page https://pypi.org/simple/crispector2/ 2024-01-17T13:10:35,729 Found index url https://pypi.org/simple/ 2024-01-17T13:10:35,839 Fetched page https://pypi.org/simple/crispector2/ as application/vnd.pypi.simple.v1+json 2024-01-17T13:10:35,841 Skipping link: No binaries permitted for crispector2: https://files.pythonhosted.org/packages/bb/5a/50eaff3c829e6d5acc61fee35051c0b9f837b947f831b80eebd47f50ceda/crispector2-2.0.7-py2.py3-none-any.whl (from https://pypi.org/simple/crispector2/) (requires-python:>=3.7) 2024-01-17T13:10:35,843 Found link https://files.pythonhosted.org/packages/db/06/4973e211590ec29330f4209fe4db7e2ebe9261d3df3cb9672741338e61db/crispector2-2.0.7.tar.gz (from https://pypi.org/simple/crispector2/) (requires-python:>=3.7), version: 2.0.7 2024-01-17T13:10:35,844 Fetching project page and analyzing links: https://www.piwheels.org/simple/crispector2/ 2024-01-17T13:10:35,845 Getting page https://www.piwheels.org/simple/crispector2/ 2024-01-17T13:10:35,847 Found index url https://www.piwheels.org/simple/ 2024-01-17T13:10:36,005 Fetched page https://www.piwheels.org/simple/crispector2/ as text/html 2024-01-17T13:10:36,007 Skipping link: not a file: https://www.piwheels.org/simple/crispector2/ 2024-01-17T13:10:36,007 Skipping link: not a file: https://pypi.org/simple/crispector2/ 2024-01-17T13:10:36,039 Given no hashes to check 1 links for project 'crispector2': discarding no candidates 2024-01-17T13:10:36,070 Collecting crispector2==2.0.7 2024-01-17T13:10:36,075 Created temporary directory: /tmp/pip-unpack-qes0v90j 2024-01-17T13:10:36,172 Downloading crispector2-2.0.7.tar.gz (284 kB) 2024-01-17T13:10:36,571 Added crispector2==2.0.7 from https://files.pythonhosted.org/packages/db/06/4973e211590ec29330f4209fe4db7e2ebe9261d3df3cb9672741338e61db/crispector2-2.0.7.tar.gz to build tracker '/tmp/pip-build-tracker-u4ryai8h' 2024-01-17T13:10:36,580 Created temporary directory: /tmp/pip-build-env-zk6qs1xy 2024-01-17T13:10:36,602 Installing build dependencies: started 2024-01-17T13:10:36,604 Running command pip subprocess to install build dependencies 2024-01-17T13:10:39,410 Using pip 23.3.1 from /home/piwheels/.local/lib/python3.7/site-packages/pip (python 3.7) 2024-01-17T13:10:40,639 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-17T13:10:42,464 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/b8/49/b3b29c52b09075fb77f69309763a563b4054d5808a3f3b95df3a62ef3d3f/setuptools-68.1.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,467 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/83/b0/18310b45f6eec3757c0554dbc1e03f2f7685c8a87831aea6adc1276faacc/setuptools-68.1.0.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,471 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/4f/ab/0bcfebdfc3bfa8554b2b2c97a555569c4c1ebc74ea288741ea8326c51906/setuptools-68.1.2-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,474 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/19/20/d8dd9d8becaf3e2d6fdc17cc41870d5ada5ceda518996cf5968c2ca71bd8/setuptools-68.1.2.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,477 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/82/3b/0715493246eb08e93506f4da0efe1d05a3c9d9ac3b76e97cc362890e6adf/setuptools-68.2.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,480 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ac/e0/4ccbb616e5f30d3595fa44ccc66ba5ac38e68885bcd888916d39f8ba480a/setuptools-68.2.0.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,483 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/95/79/6b47c6a872b40743a480687dc0c79ffb4202710789f3e4d54a84fff8b550/setuptools-68.2.1-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,486 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e9/37/c6a6eb1ebeea919e4f394d811f234322d8a99eb58d5ee0f6089dbf06c488/setuptools-68.2.1.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,489 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,492 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ef/cc/93f7213b2ab5ed383f98ce8020e632ef256b406b8569606c3f160ed8e1c9/setuptools-68.2.2.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,495 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/0f/93/daae527a7ad3ea3a4f7d84d05fd74b7cc637360a7e7b4df1df9a5046be17/setuptools-69.0.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,498 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/91/43/4121cf96ed3a2d68d862663552d8044e1d987d716b6a065ab53cd4d4640f/setuptools-69.0.0.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,501 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/f9/59/701df637517d6af0434cbb580bfc35a9c536aa7f47e0c2e222f1ef83547c/setuptools-69.0.1-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,504 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/fb/d0/d5744a7190a984ab728c7d2bd7e39bae2ff523538b233246fd34e2148566/setuptools-69.0.1.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,508 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/bb/e1/ed2dd0850446b8697ad28d118df885ad04140c64ace06c4bd559f7c8a94f/setuptools-69.0.2-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,511 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/4b/d9/d0cf66484b7e28a9c42db7e3929caed46f8b80478cd8c9bd38b7be059150/setuptools-69.0.2.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,514 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/55/3a/5121b58b578a598b269537e09a316ad2a94fdd561a2c6eb75cd68578cc6b/setuptools-69.0.3-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:42,517 Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/fc/c9/b146ca195403e0182a374e0ea4dbc69136bad3cd55bc293df496d625d0f7/setuptools-69.0.3.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:43,064 Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl#sha256=55a27b1207ffd06fc72552920c9ea1ce81541b8b651ae406bf3d3bb153bf316f (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:43,067 Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-69.0.2-py3-none-any.whl#sha256=3bc5ad43195a9eb1e8c3a2ebab28a9c3202db9d1f8e59b29971aa35abb3e0bfc (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:43,070 Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-69.0.1-py3-none-any.whl#sha256=9c4d043933771b03b0e86846a984b24281a40689d433f11691455b8bce7be14a (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:43,074 Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-69.0.0-py3-none-any.whl#sha256=7a44b57685847980bb37b08c098242577e0acb1a941ae1e01b6b42db9c9bc24b (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:43,077 Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl#sha256=f0df733ea47683814b07dbe33306d759b45214648a1b5f03bdf033f43f653193 (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:43,080 Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.2.1-py3-none-any.whl#sha256=de31ae572b523d234b51ec033bb5a28a4636b450819ef59ff98866b0ea1283d5 (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:43,083 Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.2.0-py3-none-any.whl#sha256=21c44bd2b10d2e118de5c29f18cfc80305dcc5587cef781523ae9e08376d222a (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:43,086 Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.1.2-py3-none-any.whl#sha256=9e076b8e4f5535e0e67305a15e9eb418006751b9bf0bb8d0a367d09ad0adf3a1 (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:43,089 Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/setuptools/setuptools-68.1.0-py3-none-any.whl#sha256=0637a8df7f9d79ffffa7010fdd3db5ca70836acda6994af5f7edb9524838aa23 (from https://www.piwheels.org/simple/setuptools/) (requires-python:>=3.8) 2024-01-17T13:10:44,372 Collecting setuptools>=59.6.0 2024-01-17T13:10:44,407 Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB) 2024-01-17T13:10:45,042 Collecting wheel 2024-01-17T13:10:45,076 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-01-17T13:10:50,029 Installing collected packages: wheel, setuptools 2024-01-17T13:10:50,493 Creating /tmp/pip-build-env-zk6qs1xy/overlay/bin 2024-01-17T13:10:50,498 changing mode of /tmp/pip-build-env-zk6qs1xy/overlay/bin/wheel to 755 2024-01-17T13:10:54,675 Successfully installed setuptools-68.0.0 wheel-0.42.0 2024-01-17T13:10:55,140 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-17T13:10:55,140 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-17T13:10:55,607 Installing build dependencies: finished with status 'done' 2024-01-17T13:10:55,618 Getting requirements to build wheel: started 2024-01-17T13:10:55,621 Running command Getting requirements to build wheel 2024-01-17T13:10:56,915 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `description` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:56,916 !! 2024-01-17T13:10:56,917 ******************************************************************************** 2024-01-17T13:10:56,917 ########################################################################## 2024-01-17T13:10:56,917 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:56,918 ########################################################################## 2024-01-17T13:10:56,918 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:56,919 `description = 'CRISPECTOR2 - Genome Editing Analysis Tool, with allele extension'` 2024-01-17T13:10:56,919 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:56,920 consider this value unless `description` is listed as `dynamic`. 2024-01-17T13:10:56,920 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:56,921 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:56,921 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:56,922 follow strictly the standard. 2024-01-17T13:10:56,922 To prevent this warning, you can list `description` under `dynamic` or alternatively 2024-01-17T13:10:56,922 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:56,923 configuration. 2024-01-17T13:10:56,923 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:56,924 calls to avoid build errors in the future. 2024-01-17T13:10:56,924 ******************************************************************************** 2024-01-17T13:10:56,925 !! 2024-01-17T13:10:56,925 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:56,925 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `requires-python` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:56,926 !! 2024-01-17T13:10:56,926 ******************************************************************************** 2024-01-17T13:10:56,927 ########################################################################## 2024-01-17T13:10:56,927 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:56,927 ########################################################################## 2024-01-17T13:10:56,928 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:56,928 `requires-python = '>=3.7'` 2024-01-17T13:10:56,929 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:56,929 consider this value unless `requires-python` is listed as `dynamic`. 2024-01-17T13:10:56,930 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:56,931 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:56,931 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:56,931 follow strictly the standard. 2024-01-17T13:10:56,932 To prevent this warning, you can list `requires-python` under `dynamic` or alternatively 2024-01-17T13:10:56,932 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:56,932 configuration. 2024-01-17T13:10:56,933 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:56,933 calls to avoid build errors in the future. 2024-01-17T13:10:56,934 ******************************************************************************** 2024-01-17T13:10:56,935 !! 2024-01-17T13:10:56,935 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:56,935 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `authors` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:56,935 !! 2024-01-17T13:10:56,936 ******************************************************************************** 2024-01-17T13:10:56,936 ########################################################################## 2024-01-17T13:10:56,937 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:56,937 ########################################################################## 2024-01-17T13:10:56,938 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:56,938 `authors = 'Guy Assa'` 2024-01-17T13:10:56,939 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:56,939 consider this value unless `authors` is listed as `dynamic`. 2024-01-17T13:10:56,940 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:56,940 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:56,941 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:56,941 follow strictly the standard. 2024-01-17T13:10:56,941 To prevent this warning, you can list `authors` under `dynamic` or alternatively 2024-01-17T13:10:56,942 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:56,942 configuration. 2024-01-17T13:10:56,943 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:56,943 calls to avoid build errors in the future. 2024-01-17T13:10:56,943 ******************************************************************************** 2024-01-17T13:10:56,944 !! 2024-01-17T13:10:56,944 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:56,944 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `keywords` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:56,945 !! 2024-01-17T13:10:56,945 ******************************************************************************** 2024-01-17T13:10:56,946 ########################################################################## 2024-01-17T13:10:56,946 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:56,946 ########################################################################## 2024-01-17T13:10:56,947 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:56,947 `keywords = ['crispector2']` 2024-01-17T13:10:56,948 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:56,948 consider this value unless `keywords` is listed as `dynamic`. 2024-01-17T13:10:56,949 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:56,949 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:56,950 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:56,950 follow strictly the standard. 2024-01-17T13:10:56,951 To prevent this warning, you can list `keywords` under `dynamic` or alternatively 2024-01-17T13:10:56,951 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:56,951 configuration. 2024-01-17T13:10:56,952 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:56,952 calls to avoid build errors in the future. 2024-01-17T13:10:56,953 ******************************************************************************** 2024-01-17T13:10:56,953 !! 2024-01-17T13:10:56,954 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:56,954 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `classifiers` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:56,954 !! 2024-01-17T13:10:56,955 ******************************************************************************** 2024-01-17T13:10:56,955 ########################################################################## 2024-01-17T13:10:56,956 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:56,956 ########################################################################## 2024-01-17T13:10:56,956 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:56,957 `classifiers = ['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'License :: Other/Proprietary License', 'Natural Language :: English', 'Programming Language :: Python :: 3.7']` 2024-01-17T13:10:56,958 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:56,958 consider this value unless `classifiers` is listed as `dynamic`. 2024-01-17T13:10:56,959 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:56,960 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:56,960 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:56,960 follow strictly the standard. 2024-01-17T13:10:56,961 To prevent this warning, you can list `classifiers` under `dynamic` or alternatively 2024-01-17T13:10:56,961 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:56,961 configuration. 2024-01-17T13:10:56,962 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:56,962 calls to avoid build errors in the future. 2024-01-17T13:10:56,963 ******************************************************************************** 2024-01-17T13:10:56,963 !! 2024-01-17T13:10:56,964 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:57,629 running egg_info 2024-01-17T13:10:57,631 creating crispector2.egg-info 2024-01-17T13:10:57,640 writing crispector2.egg-info/PKG-INFO 2024-01-17T13:10:57,645 writing dependency_links to crispector2.egg-info/dependency_links.txt 2024-01-17T13:10:57,648 writing entry points to crispector2.egg-info/entry_points.txt 2024-01-17T13:10:57,651 writing requirements to crispector2.egg-info/requires.txt 2024-01-17T13:10:57,653 writing top-level names to crispector2.egg-info/top_level.txt 2024-01-17T13:10:57,658 writing manifest file 'crispector2.egg-info/SOURCES.txt' 2024-01-17T13:10:57,709 reading manifest file 'crispector2.egg-info/SOURCES.txt' 2024-01-17T13:10:57,712 reading manifest template 'MANIFEST.in' 2024-01-17T13:10:57,718 adding license file 'LICENSE' 2024-01-17T13:10:57,727 writing manifest file 'crispector2.egg-info/SOURCES.txt' 2024-01-17T13:10:57,730 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `dependencies` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:57,731 !! 2024-01-17T13:10:57,732 ******************************************************************************** 2024-01-17T13:10:57,732 ########################################################################## 2024-01-17T13:10:57,733 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:57,733 ########################################################################## 2024-01-17T13:10:57,734 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:57,735 `dependencies = ['Click>=7.0', 'matplotlib >= 3.1.2', 'seaborn>=0.9.0', 'pyyaml>=5.1.2', 'plotly>=4.3.0', 'numpy>=1.12.1', 'pandas>=0.24.2', 'biopython==1.79', 'scipy>=1.2.1', 'statsmodels', 'jinja2', 'tqdm>=4.66.0', 'mpmath>=1.3.0', 'edlib']` 2024-01-17T13:10:57,736 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:57,737 consider this value unless `dependencies` is listed as `dynamic`. 2024-01-17T13:10:57,738 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:57,739 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:57,739 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:57,740 follow strictly the standard. 2024-01-17T13:10:57,740 To prevent this warning, you can list `dependencies` under `dynamic` or alternatively 2024-01-17T13:10:57,741 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:57,741 configuration. 2024-01-17T13:10:57,742 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:57,743 calls to avoid build errors in the future. 2024-01-17T13:10:57,743 ******************************************************************************** 2024-01-17T13:10:57,744 !! 2024-01-17T13:10:57,745 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:57,905 Getting requirements to build wheel: finished with status 'done' 2024-01-17T13:10:57,925 Created temporary directory: /tmp/pip-modern-metadata-q8lmnhkl 2024-01-17T13:10:57,931 Preparing metadata (pyproject.toml): started 2024-01-17T13:10:57,933 Running command Preparing metadata (pyproject.toml) 2024-01-17T13:10:59,144 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `description` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:59,145 !! 2024-01-17T13:10:59,146 ******************************************************************************** 2024-01-17T13:10:59,146 ########################################################################## 2024-01-17T13:10:59,147 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:59,147 ########################################################################## 2024-01-17T13:10:59,148 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:59,148 `description = 'CRISPECTOR2 - Genome Editing Analysis Tool, with allele extension'` 2024-01-17T13:10:59,149 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:59,149 consider this value unless `description` is listed as `dynamic`. 2024-01-17T13:10:59,150 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:59,150 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:59,151 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:59,151 follow strictly the standard. 2024-01-17T13:10:59,151 To prevent this warning, you can list `description` under `dynamic` or alternatively 2024-01-17T13:10:59,152 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:59,152 configuration. 2024-01-17T13:10:59,153 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:59,153 calls to avoid build errors in the future. 2024-01-17T13:10:59,153 ******************************************************************************** 2024-01-17T13:10:59,154 !! 2024-01-17T13:10:59,154 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:59,155 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `requires-python` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:59,155 !! 2024-01-17T13:10:59,156 ******************************************************************************** 2024-01-17T13:10:59,156 ########################################################################## 2024-01-17T13:10:59,156 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:59,157 ########################################################################## 2024-01-17T13:10:59,157 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:59,158 `requires-python = '>=3.7'` 2024-01-17T13:10:59,158 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:59,159 consider this value unless `requires-python` is listed as `dynamic`. 2024-01-17T13:10:59,159 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:59,160 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:59,160 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:59,160 follow strictly the standard. 2024-01-17T13:10:59,161 To prevent this warning, you can list `requires-python` under `dynamic` or alternatively 2024-01-17T13:10:59,161 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:59,162 configuration. 2024-01-17T13:10:59,162 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:59,163 calls to avoid build errors in the future. 2024-01-17T13:10:59,163 ******************************************************************************** 2024-01-17T13:10:59,163 !! 2024-01-17T13:10:59,164 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:59,164 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `authors` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:59,164 !! 2024-01-17T13:10:59,165 ******************************************************************************** 2024-01-17T13:10:59,165 ########################################################################## 2024-01-17T13:10:59,166 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:59,166 ########################################################################## 2024-01-17T13:10:59,166 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:59,167 `authors = 'Guy Assa'` 2024-01-17T13:10:59,168 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:59,168 consider this value unless `authors` is listed as `dynamic`. 2024-01-17T13:10:59,169 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:59,169 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:59,170 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:59,170 follow strictly the standard. 2024-01-17T13:10:59,170 To prevent this warning, you can list `authors` under `dynamic` or alternatively 2024-01-17T13:10:59,171 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:59,171 configuration. 2024-01-17T13:10:59,172 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:59,172 calls to avoid build errors in the future. 2024-01-17T13:10:59,172 ******************************************************************************** 2024-01-17T13:10:59,173 !! 2024-01-17T13:10:59,173 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:59,173 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `keywords` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:59,174 !! 2024-01-17T13:10:59,174 ******************************************************************************** 2024-01-17T13:10:59,175 ########################################################################## 2024-01-17T13:10:59,175 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:59,175 ########################################################################## 2024-01-17T13:10:59,176 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:59,176 `keywords = ['crispector2']` 2024-01-17T13:10:59,177 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:59,177 consider this value unless `keywords` is listed as `dynamic`. 2024-01-17T13:10:59,178 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:59,179 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:59,179 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:59,179 follow strictly the standard. 2024-01-17T13:10:59,180 To prevent this warning, you can list `keywords` under `dynamic` or alternatively 2024-01-17T13:10:59,180 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:59,180 configuration. 2024-01-17T13:10:59,181 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:59,181 calls to avoid build errors in the future. 2024-01-17T13:10:59,182 ******************************************************************************** 2024-01-17T13:10:59,182 !! 2024-01-17T13:10:59,182 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:59,183 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `classifiers` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:59,183 !! 2024-01-17T13:10:59,184 ******************************************************************************** 2024-01-17T13:10:59,184 ########################################################################## 2024-01-17T13:10:59,184 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:59,185 ########################################################################## 2024-01-17T13:10:59,185 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:59,186 `classifiers = ['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'License :: Other/Proprietary License', 'Natural Language :: English', 'Programming Language :: Python :: 3.7']` 2024-01-17T13:10:59,187 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:59,187 consider this value unless `classifiers` is listed as `dynamic`. 2024-01-17T13:10:59,188 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:59,188 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:59,188 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:59,189 follow strictly the standard. 2024-01-17T13:10:59,189 To prevent this warning, you can list `classifiers` under `dynamic` or alternatively 2024-01-17T13:10:59,190 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:59,190 configuration. 2024-01-17T13:10:59,190 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:59,191 calls to avoid build errors in the future. 2024-01-17T13:10:59,191 ******************************************************************************** 2024-01-17T13:10:59,192 !! 2024-01-17T13:10:59,192 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:10:59,800 running dist_info 2024-01-17T13:10:59,811 creating /tmp/pip-modern-metadata-q8lmnhkl/crispector2.egg-info 2024-01-17T13:10:59,820 writing /tmp/pip-modern-metadata-q8lmnhkl/crispector2.egg-info/PKG-INFO 2024-01-17T13:10:59,825 writing dependency_links to /tmp/pip-modern-metadata-q8lmnhkl/crispector2.egg-info/dependency_links.txt 2024-01-17T13:10:59,828 writing entry points to /tmp/pip-modern-metadata-q8lmnhkl/crispector2.egg-info/entry_points.txt 2024-01-17T13:10:59,831 writing requirements to /tmp/pip-modern-metadata-q8lmnhkl/crispector2.egg-info/requires.txt 2024-01-17T13:10:59,833 writing top-level names to /tmp/pip-modern-metadata-q8lmnhkl/crispector2.egg-info/top_level.txt 2024-01-17T13:10:59,836 writing manifest file '/tmp/pip-modern-metadata-q8lmnhkl/crispector2.egg-info/SOURCES.txt' 2024-01-17T13:10:59,878 reading manifest file '/tmp/pip-modern-metadata-q8lmnhkl/crispector2.egg-info/SOURCES.txt' 2024-01-17T13:10:59,883 reading manifest template 'MANIFEST.in' 2024-01-17T13:10:59,888 adding license file 'LICENSE' 2024-01-17T13:10:59,896 writing manifest file '/tmp/pip-modern-metadata-q8lmnhkl/crispector2.egg-info/SOURCES.txt' 2024-01-17T13:10:59,898 creating '/tmp/pip-modern-metadata-q8lmnhkl/crispector2-2.0.7.dist-info' 2024-01-17T13:10:59,985 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `dependencies` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:10:59,986 !! 2024-01-17T13:10:59,987 ******************************************************************************** 2024-01-17T13:10:59,987 ########################################################################## 2024-01-17T13:10:59,988 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:10:59,988 ########################################################################## 2024-01-17T13:10:59,989 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:10:59,990 `dependencies = ['Click>=7.0', 'matplotlib >= 3.1.2', 'seaborn>=0.9.0', 'pyyaml>=5.1.2', 'plotly>=4.3.0', 'numpy>=1.12.1', 'pandas>=0.24.2', 'biopython==1.79', 'scipy>=1.2.1', 'statsmodels', 'jinja2', 'tqdm>=4.66.0', 'mpmath>=1.3.0', 'edlib']` 2024-01-17T13:10:59,991 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:10:59,991 consider this value unless `dependencies` is listed as `dynamic`. 2024-01-17T13:10:59,992 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:10:59,993 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:10:59,993 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:10:59,994 follow strictly the standard. 2024-01-17T13:10:59,995 To prevent this warning, you can list `dependencies` under `dynamic` or alternatively 2024-01-17T13:10:59,995 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:10:59,995 configuration. 2024-01-17T13:10:59,996 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:10:59,997 calls to avoid build errors in the future. 2024-01-17T13:10:59,997 ******************************************************************************** 2024-01-17T13:10:59,998 !! 2024-01-17T13:10:59,998 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:11:00,162 Preparing metadata (pyproject.toml): finished with status 'done' 2024-01-17T13:11:00,437 Source in /tmp/pip-wheel-txek2605/crispector2_130a41963cce41f9b6cae364c827326b has version 2.0.7, which satisfies requirement crispector2==2.0.7 from https://files.pythonhosted.org/packages/db/06/4973e211590ec29330f4209fe4db7e2ebe9261d3df3cb9672741338e61db/crispector2-2.0.7.tar.gz 2024-01-17T13:11:00,439 Removed crispector2==2.0.7 from https://files.pythonhosted.org/packages/db/06/4973e211590ec29330f4209fe4db7e2ebe9261d3df3cb9672741338e61db/crispector2-2.0.7.tar.gz from build tracker '/tmp/pip-build-tracker-u4ryai8h' 2024-01-17T13:11:00,519 Created temporary directory: /tmp/pip-unpack-vnudwao7 2024-01-17T13:11:00,527 Created temporary directory: /tmp/pip-unpack-m733k_58 2024-01-17T13:11:00,578 Building wheels for collected packages: crispector2 2024-01-17T13:11:00,594 Created temporary directory: /tmp/pip-wheel-vlhsje3r 2024-01-17T13:11:00,594 Destination directory: /tmp/pip-wheel-vlhsje3r 2024-01-17T13:11:00,599 Building wheel for crispector2 (pyproject.toml): started 2024-01-17T13:11:00,601 Running command Building wheel for crispector2 (pyproject.toml) 2024-01-17T13:11:01,943 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `description` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:11:01,945 !! 2024-01-17T13:11:01,945 ******************************************************************************** 2024-01-17T13:11:01,946 ########################################################################## 2024-01-17T13:11:01,946 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:11:01,946 ########################################################################## 2024-01-17T13:11:01,947 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:11:01,947 `description = 'CRISPECTOR2 - Genome Editing Analysis Tool, with allele extension'` 2024-01-17T13:11:01,948 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:11:01,948 consider this value unless `description` is listed as `dynamic`. 2024-01-17T13:11:01,949 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:11:01,950 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:11:01,950 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:11:01,950 follow strictly the standard. 2024-01-17T13:11:01,951 To prevent this warning, you can list `description` under `dynamic` or alternatively 2024-01-17T13:11:01,951 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:11:01,951 configuration. 2024-01-17T13:11:01,952 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:11:01,952 calls to avoid build errors in the future. 2024-01-17T13:11:01,953 ******************************************************************************** 2024-01-17T13:11:01,953 !! 2024-01-17T13:11:01,954 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:11:01,954 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `requires-python` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:11:01,954 !! 2024-01-17T13:11:01,955 ******************************************************************************** 2024-01-17T13:11:01,955 ########################################################################## 2024-01-17T13:11:01,956 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:11:01,956 ########################################################################## 2024-01-17T13:11:01,956 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:11:01,957 `requires-python = '>=3.7'` 2024-01-17T13:11:01,958 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:11:01,958 consider this value unless `requires-python` is listed as `dynamic`. 2024-01-17T13:11:01,959 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:11:01,959 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:11:01,960 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:11:01,960 follow strictly the standard. 2024-01-17T13:11:01,960 To prevent this warning, you can list `requires-python` under `dynamic` or alternatively 2024-01-17T13:11:01,961 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:11:01,961 configuration. 2024-01-17T13:11:01,962 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:11:01,962 calls to avoid build errors in the future. 2024-01-17T13:11:01,962 ******************************************************************************** 2024-01-17T13:11:01,963 !! 2024-01-17T13:11:01,963 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:11:01,963 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `authors` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:11:01,964 !! 2024-01-17T13:11:01,964 ******************************************************************************** 2024-01-17T13:11:01,965 ########################################################################## 2024-01-17T13:11:01,965 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:11:01,965 ########################################################################## 2024-01-17T13:11:01,966 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:11:01,967 `authors = 'Guy Assa'` 2024-01-17T13:11:01,967 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:11:01,967 consider this value unless `authors` is listed as `dynamic`. 2024-01-17T13:11:01,968 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:11:01,969 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:11:01,969 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:11:01,969 follow strictly the standard. 2024-01-17T13:11:01,970 To prevent this warning, you can list `authors` under `dynamic` or alternatively 2024-01-17T13:11:01,970 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:11:01,970 configuration. 2024-01-17T13:11:01,971 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:11:01,971 calls to avoid build errors in the future. 2024-01-17T13:11:01,972 ******************************************************************************** 2024-01-17T13:11:01,972 !! 2024-01-17T13:11:01,973 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:11:01,973 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `keywords` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:11:01,973 !! 2024-01-17T13:11:01,974 ******************************************************************************** 2024-01-17T13:11:01,974 ########################################################################## 2024-01-17T13:11:01,974 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:11:01,975 ########################################################################## 2024-01-17T13:11:01,975 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:11:01,976 `keywords = ['crispector2']` 2024-01-17T13:11:01,976 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:11:01,977 consider this value unless `keywords` is listed as `dynamic`. 2024-01-17T13:11:01,977 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:11:01,978 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:11:01,978 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:11:01,979 follow strictly the standard. 2024-01-17T13:11:01,979 To prevent this warning, you can list `keywords` under `dynamic` or alternatively 2024-01-17T13:11:01,980 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:11:01,980 configuration. 2024-01-17T13:11:01,981 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:11:01,981 calls to avoid build errors in the future. 2024-01-17T13:11:01,981 ******************************************************************************** 2024-01-17T13:11:01,982 !! 2024-01-17T13:11:01,982 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:11:01,982 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `classifiers` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:11:01,983 !! 2024-01-17T13:11:01,983 ******************************************************************************** 2024-01-17T13:11:01,984 ########################################################################## 2024-01-17T13:11:01,984 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:11:01,984 ########################################################################## 2024-01-17T13:11:01,985 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:11:01,986 `classifiers = ['Development Status :: 4 - Beta', 'Intended Audience :: Science/Research', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'License :: Other/Proprietary License', 'Natural Language :: English', 'Programming Language :: Python :: 3.7']` 2024-01-17T13:11:01,986 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:11:01,986 consider this value unless `classifiers` is listed as `dynamic`. 2024-01-17T13:11:01,987 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:11:01,988 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:11:01,988 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:11:01,988 follow strictly the standard. 2024-01-17T13:11:01,989 To prevent this warning, you can list `classifiers` under `dynamic` or alternatively 2024-01-17T13:11:01,989 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:11:01,989 configuration. 2024-01-17T13:11:01,990 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:11:01,990 calls to avoid build errors in the future. 2024-01-17T13:11:01,991 ******************************************************************************** 2024-01-17T13:11:01,991 !! 2024-01-17T13:11:01,992 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:11:02,614 running bdist_wheel 2024-01-17T13:11:02,657 running build 2024-01-17T13:11:02,658 running build_py 2024-01-17T13:11:02,679 creating build 2024-01-17T13:11:02,739 creating build/lib 2024-01-17T13:11:02,748 creating build/lib/crispector2 2024-01-17T13:11:02,759 copying crispector2/cli.py -> build/lib/crispector2 2024-01-17T13:11:02,777 copying crispector2/__init__.py -> build/lib/crispector2 2024-01-17T13:11:02,781 copying crispector2/crispector_main.py -> build/lib/crispector2 2024-01-17T13:11:02,814 creating build/lib/crispector2/algorithm 2024-01-17T13:11:02,816 copying crispector2/algorithm/__init__.py -> build/lib/crispector2/algorithm 2024-01-17T13:11:02,847 copying crispector2/algorithm/core_algorithm.py -> build/lib/crispector2/algorithm 2024-01-17T13:11:02,877 copying crispector2/algorithm/translocations_original.py -> build/lib/crispector2/algorithm 2024-01-17T13:11:02,884 copying crispector2/algorithm/binomial_probability.py -> build/lib/crispector2/algorithm 2024-01-17T13:11:02,909 copying crispector2/algorithm/translocations.py -> build/lib/crispector2/algorithm 2024-01-17T13:11:02,933 creating build/lib/crispector2/allele 2024-01-17T13:11:02,940 copying crispector2/allele/allele_mock.py -> build/lib/crispector2/allele 2024-01-17T13:11:02,964 copying crispector2/allele/allele_tx.py -> build/lib/crispector2/allele 2024-01-17T13:11:02,983 copying crispector2/allele/random_reads_handler.py -> build/lib/crispector2/allele 2024-01-17T13:11:02,993 copying crispector2/allele/__init__.py -> build/lib/crispector2/allele 2024-01-17T13:11:03,000 copying crispector2/allele/allele_reference_df.py -> build/lib/crispector2/allele 2024-01-17T13:11:03,008 creating build/lib/crispector2/config 2024-01-17T13:11:03,011 copying crispector2/config/__init__.py -> build/lib/crispector2/config 2024-01-17T13:11:03,020 creating build/lib/crispector2/input_processing 2024-01-17T13:11:03,032 copying crispector2/input_processing/__init__.py -> build/lib/crispector2/input_processing 2024-01-17T13:11:03,038 copying crispector2/input_processing/alignment.py -> build/lib/crispector2/input_processing 2024-01-17T13:11:03,045 copying crispector2/input_processing/input_processing.py -> build/lib/crispector2/input_processing 2024-01-17T13:11:03,285 copying crispector2/input_processing/utils.py -> build/lib/crispector2/input_processing 2024-01-17T13:11:03,307 creating build/lib/crispector2/modifications 2024-01-17T13:11:03,313 copying crispector2/modifications/modification_types.py -> build/lib/crispector2/modifications 2024-01-17T13:11:03,324 copying crispector2/modifications/modification_tables.py -> build/lib/crispector2/modifications 2024-01-17T13:11:03,347 copying crispector2/modifications/__init__.py -> build/lib/crispector2/modifications 2024-01-17T13:11:03,363 creating build/lib/crispector2/report 2024-01-17T13:11:03,375 copying crispector2/report/__init__.py -> build/lib/crispector2/report 2024-01-17T13:11:03,382 copying crispector2/report/visualization_and_output.py -> build/lib/crispector2/report 2024-01-17T13:11:03,396 copying crispector2/report/visualization_and_output_w_abigail.py -> build/lib/crispector2/report 2024-01-17T13:11:03,417 copying crispector2/report/html_report.py -> build/lib/crispector2/report 2024-01-17T13:11:03,429 creating build/lib/crispector2/utils 2024-01-17T13:11:03,432 copying crispector2/utils/logger.py -> build/lib/crispector2/utils 2024-01-17T13:11:03,451 copying crispector2/utils/constants_and_types_old.py -> build/lib/crispector2/utils 2024-01-17T13:11:03,456 copying crispector2/utils/__init__.py -> build/lib/crispector2/utils 2024-01-17T13:11:03,465 copying crispector2/utils/constants_and_types.py -> build/lib/crispector2/utils 2024-01-17T13:11:03,479 copying crispector2/utils/configurator.py -> build/lib/crispector2/utils 2024-01-17T13:11:03,483 copying crispector2/utils/exceptions.py -> build/lib/crispector2/utils 2024-01-17T13:11:03,486 running egg_info 2024-01-17T13:11:03,495 writing crispector2.egg-info/PKG-INFO 2024-01-17T13:11:03,504 writing dependency_links to crispector2.egg-info/dependency_links.txt 2024-01-17T13:11:03,510 writing entry points to crispector2.egg-info/entry_points.txt 2024-01-17T13:11:03,513 writing requirements to crispector2.egg-info/requires.txt 2024-01-17T13:11:03,521 writing top-level names to crispector2.egg-info/top_level.txt 2024-01-17T13:11:03,554 reading manifest file 'crispector2.egg-info/SOURCES.txt' 2024-01-17T13:11:03,568 reading manifest template 'MANIFEST.in' 2024-01-17T13:11:03,573 adding license file 'LICENSE' 2024-01-17T13:11:03,584 writing manifest file 'crispector2.egg-info/SOURCES.txt' 2024-01-17T13:11:03,606 copying crispector2/config/default_config.yml -> build/lib/crispector2/config 2024-01-17T13:11:03,615 creating build/lib/crispector2/report/html_templates 2024-01-17T13:11:03,618 copying crispector2/report/html_templates/crispector_logo.jpg -> build/lib/crispector2/report/html_templates 2024-01-17T13:11:03,625 copying crispector2/report/html_templates/crispector_logo.png -> build/lib/crispector2/report/html_templates 2024-01-17T13:11:03,639 copying crispector2/report/html_templates/file_to_render.html -> build/lib/crispector2/report/html_templates 2024-01-17T13:11:03,646 copying crispector2/report/html_templates/file_to_render_new.html -> build/lib/crispector2/report/html_templates 2024-01-17T13:11:03,655 copying crispector2/report/html_templates/final_layout.html -> build/lib/crispector2/report/html_templates 2024-01-17T13:11:03,664 copying crispector2/report/html_templates/final_layout_new.html -> build/lib/crispector2/report/html_templates 2024-01-17T13:11:03,671 copying crispector2/report/html_templates/site_file_to_render.html -> build/lib/crispector2/report/html_templates 2024-01-17T13:11:03,680 copying crispector2/report/html_templates/site_layout.html -> build/lib/crispector2/report/html_templates 2024-01-17T13:11:03,716 installing to build/bdist.linux-armv7l/wheel 2024-01-17T13:11:03,717 running install 2024-01-17T13:11:03,776 running install_lib 2024-01-17T13:11:03,787 creating build/bdist.linux-armv7l 2024-01-17T13:11:03,788 creating build/bdist.linux-armv7l/wheel 2024-01-17T13:11:03,794 creating build/bdist.linux-armv7l/wheel/crispector2 2024-01-17T13:11:03,796 copying build/lib/crispector2/cli.py -> build/bdist.linux-armv7l/wheel/crispector2 2024-01-17T13:11:03,807 copying build/lib/crispector2/__init__.py -> build/bdist.linux-armv7l/wheel/crispector2 2024-01-17T13:11:03,811 copying build/lib/crispector2/crispector_main.py -> build/bdist.linux-armv7l/wheel/crispector2 2024-01-17T13:11:03,820 creating build/bdist.linux-armv7l/wheel/crispector2/modifications 2024-01-17T13:11:03,822 copying build/lib/crispector2/modifications/modification_types.py -> build/bdist.linux-armv7l/wheel/crispector2/modifications 2024-01-17T13:11:03,827 copying build/lib/crispector2/modifications/modification_tables.py -> build/bdist.linux-armv7l/wheel/crispector2/modifications 2024-01-17T13:11:03,833 copying build/lib/crispector2/modifications/__init__.py -> build/bdist.linux-armv7l/wheel/crispector2/modifications 2024-01-17T13:11:03,840 creating build/bdist.linux-armv7l/wheel/crispector2/report 2024-01-17T13:11:03,845 creating build/bdist.linux-armv7l/wheel/crispector2/report/html_templates 2024-01-17T13:11:03,848 copying build/lib/crispector2/report/html_templates/file_to_render.html -> build/bdist.linux-armv7l/wheel/crispector2/report/html_templates 2024-01-17T13:11:03,857 copying build/lib/crispector2/report/html_templates/final_layout_new.html -> build/bdist.linux-armv7l/wheel/crispector2/report/html_templates 2024-01-17T13:11:03,862 copying build/lib/crispector2/report/html_templates/crispector_logo.jpg -> build/bdist.linux-armv7l/wheel/crispector2/report/html_templates 2024-01-17T13:11:03,869 copying build/lib/crispector2/report/html_templates/file_to_render_new.html -> build/bdist.linux-armv7l/wheel/crispector2/report/html_templates 2024-01-17T13:11:03,877 copying build/lib/crispector2/report/html_templates/crispector_logo.png -> build/bdist.linux-armv7l/wheel/crispector2/report/html_templates 2024-01-17T13:11:03,895 copying build/lib/crispector2/report/html_templates/site_layout.html -> build/bdist.linux-armv7l/wheel/crispector2/report/html_templates 2024-01-17T13:11:03,906 copying build/lib/crispector2/report/html_templates/site_file_to_render.html -> build/bdist.linux-armv7l/wheel/crispector2/report/html_templates 2024-01-17T13:11:03,917 copying build/lib/crispector2/report/html_templates/final_layout.html -> build/bdist.linux-armv7l/wheel/crispector2/report/html_templates 2024-01-17T13:11:03,930 copying build/lib/crispector2/report/__init__.py -> build/bdist.linux-armv7l/wheel/crispector2/report 2024-01-17T13:11:03,933 copying build/lib/crispector2/report/visualization_and_output.py -> build/bdist.linux-armv7l/wheel/crispector2/report 2024-01-17T13:11:03,947 copying build/lib/crispector2/report/visualization_and_output_w_abigail.py -> build/bdist.linux-armv7l/wheel/crispector2/report 2024-01-17T13:11:03,956 copying build/lib/crispector2/report/html_report.py -> build/bdist.linux-armv7l/wheel/crispector2/report 2024-01-17T13:11:03,962 creating build/bdist.linux-armv7l/wheel/crispector2/algorithm 2024-01-17T13:11:03,965 copying build/lib/crispector2/algorithm/__init__.py -> build/bdist.linux-armv7l/wheel/crispector2/algorithm 2024-01-17T13:11:03,968 copying build/lib/crispector2/algorithm/core_algorithm.py -> build/bdist.linux-armv7l/wheel/crispector2/algorithm 2024-01-17T13:11:03,974 copying build/lib/crispector2/algorithm/translocations_original.py -> build/bdist.linux-armv7l/wheel/crispector2/algorithm 2024-01-17T13:11:03,979 copying build/lib/crispector2/algorithm/binomial_probability.py -> build/bdist.linux-armv7l/wheel/crispector2/algorithm 2024-01-17T13:11:03,990 copying build/lib/crispector2/algorithm/translocations.py -> build/bdist.linux-armv7l/wheel/crispector2/algorithm 2024-01-17T13:11:04,000 creating build/bdist.linux-armv7l/wheel/crispector2/config 2024-01-17T13:11:04,002 copying build/lib/crispector2/config/__init__.py -> build/bdist.linux-armv7l/wheel/crispector2/config 2024-01-17T13:11:04,007 copying build/lib/crispector2/config/default_config.yml -> build/bdist.linux-armv7l/wheel/crispector2/config 2024-01-17T13:11:04,014 creating build/bdist.linux-armv7l/wheel/crispector2/input_processing 2024-01-17T13:11:04,016 copying build/lib/crispector2/input_processing/__init__.py -> build/bdist.linux-armv7l/wheel/crispector2/input_processing 2024-01-17T13:11:04,019 copying build/lib/crispector2/input_processing/alignment.py -> build/bdist.linux-armv7l/wheel/crispector2/input_processing 2024-01-17T13:11:04,027 copying build/lib/crispector2/input_processing/input_processing.py -> build/bdist.linux-armv7l/wheel/crispector2/input_processing 2024-01-17T13:11:04,034 copying build/lib/crispector2/input_processing/utils.py -> build/bdist.linux-armv7l/wheel/crispector2/input_processing 2024-01-17T13:11:04,040 creating build/bdist.linux-armv7l/wheel/crispector2/utils 2024-01-17T13:11:04,042 copying build/lib/crispector2/utils/logger.py -> build/bdist.linux-armv7l/wheel/crispector2/utils 2024-01-17T13:11:04,047 copying build/lib/crispector2/utils/constants_and_types_old.py -> build/bdist.linux-armv7l/wheel/crispector2/utils 2024-01-17T13:11:04,052 copying build/lib/crispector2/utils/__init__.py -> build/bdist.linux-armv7l/wheel/crispector2/utils 2024-01-17T13:11:04,055 copying build/lib/crispector2/utils/constants_and_types.py -> build/bdist.linux-armv7l/wheel/crispector2/utils 2024-01-17T13:11:04,061 copying build/lib/crispector2/utils/configurator.py -> build/bdist.linux-armv7l/wheel/crispector2/utils 2024-01-17T13:11:04,065 copying build/lib/crispector2/utils/exceptions.py -> build/bdist.linux-armv7l/wheel/crispector2/utils 2024-01-17T13:11:04,071 creating build/bdist.linux-armv7l/wheel/crispector2/allele 2024-01-17T13:11:04,072 copying build/lib/crispector2/allele/allele_mock.py -> build/bdist.linux-armv7l/wheel/crispector2/allele 2024-01-17T13:11:04,081 copying build/lib/crispector2/allele/allele_tx.py -> build/bdist.linux-armv7l/wheel/crispector2/allele 2024-01-17T13:11:04,086 copying build/lib/crispector2/allele/random_reads_handler.py -> build/bdist.linux-armv7l/wheel/crispector2/allele 2024-01-17T13:11:04,093 copying build/lib/crispector2/allele/__init__.py -> build/bdist.linux-armv7l/wheel/crispector2/allele 2024-01-17T13:11:04,097 copying build/lib/crispector2/allele/allele_reference_df.py -> build/bdist.linux-armv7l/wheel/crispector2/allele 2024-01-17T13:11:04,101 running install_egg_info 2024-01-17T13:11:04,112 Copying crispector2.egg-info to build/bdist.linux-armv7l/wheel/crispector2-2.0.7-py3.7.egg-info 2024-01-17T13:11:04,147 running install_scripts 2024-01-17T13:11:04,209 creating build/bdist.linux-armv7l/wheel/crispector2-2.0.7.dist-info/WHEEL 2024-01-17T13:11:04,215 creating '/tmp/pip-wheel-vlhsje3r/.tmp-r3u2___4/crispector2-2.0.7-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-17T13:11:04,225 adding 'crispector2/__init__.py' 2024-01-17T13:11:04,229 adding 'crispector2/cli.py' 2024-01-17T13:11:04,238 adding 'crispector2/crispector_main.py' 2024-01-17T13:11:04,243 adding 'crispector2/algorithm/__init__.py' 2024-01-17T13:11:04,247 adding 'crispector2/algorithm/binomial_probability.py' 2024-01-17T13:11:04,251 adding 'crispector2/algorithm/core_algorithm.py' 2024-01-17T13:11:04,255 adding 'crispector2/algorithm/translocations.py' 2024-01-17T13:11:04,258 adding 'crispector2/algorithm/translocations_original.py' 2024-01-17T13:11:04,262 adding 'crispector2/allele/__init__.py' 2024-01-17T13:11:04,274 adding 'crispector2/allele/allele_mock.py' 2024-01-17T13:11:04,278 adding 'crispector2/allele/allele_reference_df.py' 2024-01-17T13:11:04,282 adding 'crispector2/allele/allele_tx.py' 2024-01-17T13:11:04,290 adding 'crispector2/allele/random_reads_handler.py' 2024-01-17T13:11:04,294 adding 'crispector2/config/__init__.py' 2024-01-17T13:11:04,298 adding 'crispector2/config/default_config.yml' 2024-01-17T13:11:04,301 adding 'crispector2/input_processing/__init__.py' 2024-01-17T13:11:04,310 adding 'crispector2/input_processing/alignment.py' 2024-01-17T13:11:04,319 adding 'crispector2/input_processing/input_processing.py' 2024-01-17T13:11:04,323 adding 'crispector2/input_processing/utils.py' 2024-01-17T13:11:04,327 adding 'crispector2/modifications/__init__.py' 2024-01-17T13:11:04,331 adding 'crispector2/modifications/modification_tables.py' 2024-01-17T13:11:04,335 adding 'crispector2/modifications/modification_types.py' 2024-01-17T13:11:04,339 adding 'crispector2/report/__init__.py' 2024-01-17T13:11:04,342 adding 'crispector2/report/html_report.py' 2024-01-17T13:11:04,355 adding 'crispector2/report/visualization_and_output.py' 2024-01-17T13:11:04,371 adding 'crispector2/report/visualization_and_output_w_abigail.py' 2024-01-17T13:11:04,385 adding 'crispector2/report/html_templates/crispector_logo.jpg' 2024-01-17T13:11:04,438 adding 'crispector2/report/html_templates/crispector_logo.png' 2024-01-17T13:11:04,445 adding 'crispector2/report/html_templates/file_to_render.html' 2024-01-17T13:11:04,449 adding 'crispector2/report/html_templates/file_to_render_new.html' 2024-01-17T13:11:04,453 adding 'crispector2/report/html_templates/final_layout.html' 2024-01-17T13:11:04,458 adding 'crispector2/report/html_templates/final_layout_new.html' 2024-01-17T13:11:04,461 adding 'crispector2/report/html_templates/site_file_to_render.html' 2024-01-17T13:11:04,465 adding 'crispector2/report/html_templates/site_layout.html' 2024-01-17T13:11:04,469 adding 'crispector2/utils/__init__.py' 2024-01-17T13:11:04,472 adding 'crispector2/utils/configurator.py' 2024-01-17T13:11:04,476 adding 'crispector2/utils/constants_and_types.py' 2024-01-17T13:11:04,481 adding 'crispector2/utils/constants_and_types_old.py' 2024-01-17T13:11:04,484 adding 'crispector2/utils/exceptions.py' 2024-01-17T13:11:04,486 adding 'crispector2/utils/logger.py' 2024-01-17T13:11:04,492 adding 'crispector2-2.0.7.dist-info/LICENSE' 2024-01-17T13:11:04,495 adding 'crispector2-2.0.7.dist-info/METADATA' 2024-01-17T13:11:04,497 adding 'crispector2-2.0.7.dist-info/WHEEL' 2024-01-17T13:11:04,500 adding 'crispector2-2.0.7.dist-info/entry_points.txt' 2024-01-17T13:11:04,502 adding 'crispector2-2.0.7.dist-info/top_level.txt' 2024-01-17T13:11:04,505 adding 'crispector2-2.0.7.dist-info/RECORD' 2024-01-17T13:11:04,521 removing build/bdist.linux-armv7l/wheel 2024-01-17T13:11:04,562 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/config/_apply_pyprojecttoml.py:62: _WouldIgnoreField: `dependencies` defined outside of `pyproject.toml` would be ignored. 2024-01-17T13:11:04,563 !! 2024-01-17T13:11:04,564 ******************************************************************************** 2024-01-17T13:11:04,564 ########################################################################## 2024-01-17T13:11:04,565 # configuration would be ignored/result in error due to `pyproject.toml` # 2024-01-17T13:11:04,565 ########################################################################## 2024-01-17T13:11:04,566 The following seems to be defined outside of `pyproject.toml`: 2024-01-17T13:11:04,567 `dependencies = ['Click>=7.0', 'matplotlib >= 3.1.2', 'seaborn>=0.9.0', 'pyyaml>=5.1.2', 'plotly>=4.3.0', 'numpy>=1.12.1', 'pandas>=0.24.2', 'biopython==1.79', 'scipy>=1.2.1', 'statsmodels', 'jinja2', 'tqdm>=4.66.0', 'mpmath>=1.3.0', 'edlib']` 2024-01-17T13:11:04,568 According to the spec (see the link below), however, setuptools CANNOT 2024-01-17T13:11:04,568 consider this value unless `dependencies` is listed as `dynamic`. 2024-01-17T13:11:04,569 https://packaging.python.org/en/latest/specifications/declaring-project-metadata/ 2024-01-17T13:11:04,570 For the time being, `setuptools` will still consider the given value (as a 2024-01-17T13:11:04,570 **transitional** measure), but please note that future releases of setuptools will 2024-01-17T13:11:04,571 follow strictly the standard. 2024-01-17T13:11:04,572 To prevent this warning, you can list `dependencies` under `dynamic` or alternatively 2024-01-17T13:11:04,572 remove the `[project]` table from your file and rely entirely on other means of 2024-01-17T13:11:04,572 configuration. 2024-01-17T13:11:04,573 This deprecation is overdue, please update your project and remove deprecated 2024-01-17T13:11:04,574 calls to avoid build errors in the future. 2024-01-17T13:11:04,574 ******************************************************************************** 2024-01-17T13:11:04,575 !! 2024-01-17T13:11:04,576 _handle_missing_dynamic(dist, project_table) 2024-01-17T13:11:04,576 /tmp/pip-build-env-zk6qs1xy/overlay/lib/python3.7/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'crispector2.report.html_templates' is absent from the `packages` configuration. 2024-01-17T13:11:04,576 !! 2024-01-17T13:11:04,577 ******************************************************************************** 2024-01-17T13:11:04,578 ############################ 2024-01-17T13:11:04,578 # Package would be ignored # 2024-01-17T13:11:04,578 ############################ 2024-01-17T13:11:04,579 Python recognizes 'crispector2.report.html_templates' as an importable package[^1], 2024-01-17T13:11:04,579 but it is absent from setuptools' `packages` configuration. 2024-01-17T13:11:04,580 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T13:11:04,580 package, please make sure that 'crispector2.report.html_templates' is explicitly added 2024-01-17T13:11:04,581 to the `packages` configuration field. 2024-01-17T13:11:04,581 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T13:11:04,582 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T13:11:04,582 instead of `find_packages(...)`/`find:`). 2024-01-17T13:11:04,583 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T13:11:04,584 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T13:11:04,584 If you don't want 'crispector2.report.html_templates' to be distributed and are 2024-01-17T13:11:04,585 already explicitly excluding 'crispector2.report.html_templates' via 2024-01-17T13:11:04,585 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T13:11:04,585 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T13:11:04,586 combination with a more fine grained `package-data` configuration. 2024-01-17T13:11:04,587 You can read more about "package data files" on setuptools documentation page: 2024-01-17T13:11:04,587 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T13:11:04,589 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T13:11:04,589 even if it does not contain any `.py` files. 2024-01-17T13:11:04,589 On the other hand, currently there is no concept of package data 2024-01-17T13:11:04,590 directory, all directories are treated like packages. 2024-01-17T13:11:04,590 ******************************************************************************** 2024-01-17T13:11:04,591 !! 2024-01-17T13:11:04,591 check.warn(importable) 2024-01-17T13:11:04,741 Building wheel for crispector2 (pyproject.toml): finished with status 'done' 2024-01-17T13:11:04,774 Created wheel for crispector2: filename=crispector2-2.0.7-py2.py3-none-any.whl size=305186 sha256=6ff640c1b6141b08057f68d1f3c5f51ee814fdd573a7af2c20b2d37d71321f9f 2024-01-17T13:11:04,776 Stored in directory: /tmp/pip-ephem-wheel-cache-iajxibql/wheels/50/2a/eb/4744f4160a83fbfb43b79df4bb5ac083ebe2e076190554ce19 2024-01-17T13:11:04,806 Successfully built crispector2 2024-01-17T13:11:04,837 Removed build tracker: '/tmp/pip-build-tracker-u4ryai8h'