2024-01-23T02:22:05,458 Created temporary directory: /tmp/pip-build-tracker-cfgpmyg8 2024-01-23T02:22:05,459 Initialized build tracking at /tmp/pip-build-tracker-cfgpmyg8 2024-01-23T02:22:05,459 Created build tracker: /tmp/pip-build-tracker-cfgpmyg8 2024-01-23T02:22:05,460 Entered build tracker: /tmp/pip-build-tracker-cfgpmyg8 2024-01-23T02:22:05,460 Created temporary directory: /tmp/pip-wheel-x42y2hvl 2024-01-23T02:22:05,464 Created temporary directory: /tmp/pip-ephem-wheel-cache-6u6vx2_c 2024-01-23T02:22:05,486 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-23T02:22:05,490 2 location(s) to search for versions of misato-dataset: 2024-01-23T02:22:05,490 * https://pypi.org/simple/misato-dataset/ 2024-01-23T02:22:05,490 * https://www.piwheels.org/simple/misato-dataset/ 2024-01-23T02:22:05,491 Fetching project page and analyzing links: https://pypi.org/simple/misato-dataset/ 2024-01-23T02:22:05,492 Getting page https://pypi.org/simple/misato-dataset/ 2024-01-23T02:22:05,493 Found index url https://pypi.org/simple/ 2024-01-23T02:22:05,628 Fetched page https://pypi.org/simple/misato-dataset/ as application/vnd.pypi.simple.v1+json 2024-01-23T02:22:05,631 Found link https://files.pythonhosted.org/packages/b6/8e/6522d1782f2cc6efcd06115cb568cd7df6f90313b7afe55b3bf96db74bf6/misato-dataset-0.0.4.tar.gz (from https://pypi.org/simple/misato-dataset/) (requires-python:>=3.10), version: 0.0.4 2024-01-23T02:22:05,632 Skipping link: No binaries permitted for misato-dataset: https://files.pythonhosted.org/packages/71/a6/9afb0b2b43540eed2835eb5bca8d660e889521e90b77a5097e772a42f599/misato_dataset-0.0.4-py3-none-any.whl (from https://pypi.org/simple/misato-dataset/) (requires-python:>=3.10) 2024-01-23T02:22:05,633 Found link https://files.pythonhosted.org/packages/2e/c8/ff285107e76c0aaf8a2c6013e00cfa90b9b4894cce9647d2866b4878e1d6/misato-dataset-0.0.5.tar.gz (from https://pypi.org/simple/misato-dataset/) (requires-python:>=3.10), version: 0.0.5 2024-01-23T02:22:05,634 Skipping link: No binaries permitted for misato-dataset: https://files.pythonhosted.org/packages/ff/7c/14fcefed72cd4b9d1a2a1895d914c4795d1f46654476b0cadecbdf7f7bc5/misato_dataset-0.0.5-py3-none-any.whl (from https://pypi.org/simple/misato-dataset/) (requires-python:>=3.10) 2024-01-23T02:22:05,635 Found link https://files.pythonhosted.org/packages/14/47/66fabf4e85649eddb321acc7fa636f0b39c2eae017d06526885cf0587fb8/misato-dataset-0.0.6.tar.gz (from https://pypi.org/simple/misato-dataset/) (requires-python:>=3.10), version: 0.0.6 2024-01-23T02:22:05,635 Skipping link: No binaries permitted for misato-dataset: https://files.pythonhosted.org/packages/9e/96/a7e8c65595daeb6e49ffe3735cd2b05bc1aad83cbfe8bdef9af83b898c35/misato_dataset-0.0.6-py3-none-any.whl (from https://pypi.org/simple/misato-dataset/) (requires-python:>=3.10) 2024-01-23T02:22:05,636 Found link https://files.pythonhosted.org/packages/21/2f/75d840b10148c2377a4d982b82aa4332c6433f85215d486ddf18f0e6c0cf/misato-dataset-0.0.7.tar.gz (from https://pypi.org/simple/misato-dataset/) (requires-python:>=3.10), version: 0.0.7 2024-01-23T02:22:05,637 Skipping link: No binaries permitted for misato-dataset: https://files.pythonhosted.org/packages/0d/c8/8a4bfc619477a58280171e0d1d49f3efbb979aa2fe904dab7b00def1c690/misato_dataset-0.0.7-py3-none-any.whl (from https://pypi.org/simple/misato-dataset/) (requires-python:>=3.10) 2024-01-23T02:22:05,638 Fetching project page and analyzing links: https://www.piwheels.org/simple/misato-dataset/ 2024-01-23T02:22:05,638 Getting page https://www.piwheels.org/simple/misato-dataset/ 2024-01-23T02:22:05,639 Found index url https://www.piwheels.org/simple/ 2024-01-23T02:22:05,811 Fetched page https://www.piwheels.org/simple/misato-dataset/ as text/html 2024-01-23T02:22:05,813 Skipping link: No binaries permitted for misato-dataset: https://www.piwheels.org/simple/misato-dataset/misato_dataset-0.0.5-py3-none-any.whl#sha256=bbfb1d164f02c98ca53bcbc9fc3b8994ee9e6d251fdb9cfac20032cff6dd237d (from https://www.piwheels.org/simple/misato-dataset/) (requires-python:>=3.10) 2024-01-23T02:22:05,814 Skipping link: No binaries permitted for misato-dataset: https://www.piwheels.org/simple/misato-dataset/misato_dataset-0.0.4-py3-none-any.whl#sha256=cb664ac697d0852e395f229186b291cd45f481228517eb6ff3699e3ca6b18d10 (from https://www.piwheels.org/simple/misato-dataset/) (requires-python:>=3.10) 2024-01-23T02:22:05,814 Skipping link: not a file: https://www.piwheels.org/simple/misato-dataset/ 2024-01-23T02:22:05,815 Skipping link: not a file: https://pypi.org/simple/misato-dataset/ 2024-01-23T02:22:05,834 Given no hashes to check 1 links for project 'misato-dataset': discarding no candidates 2024-01-23T02:22:05,852 Collecting misato-dataset==0.0.6 2024-01-23T02:22:05,855 Created temporary directory: /tmp/pip-unpack-9n18ifrw 2024-01-23T02:22:06,073 Downloading misato-dataset-0.0.6.tar.gz (29 kB) 2024-01-23T02:22:06,150 Added misato-dataset==0.0.6 from https://files.pythonhosted.org/packages/14/47/66fabf4e85649eddb321acc7fa636f0b39c2eae017d06526885cf0587fb8/misato-dataset-0.0.6.tar.gz to build tracker '/tmp/pip-build-tracker-cfgpmyg8' 2024-01-23T02:22:06,152 Running setup.py (path:/tmp/pip-wheel-x42y2hvl/misato-dataset_0a777a0a190a4d468cca061d7211ff0a/setup.py) egg_info for package misato-dataset 2024-01-23T02:22:06,153 Created temporary directory: /tmp/pip-pip-egg-info-fb_spmp0 2024-01-23T02:22:06,153 Preparing metadata (setup.py): started 2024-01-23T02:22:06,154 Running command python setup.py egg_info 2024-01-23T02:22:06,620 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'extra_require' 2024-01-23T02:22:06,620 warnings.warn(msg) 2024-01-23T02:22:07,133 running egg_info 2024-01-23T02:22:07,134 creating /tmp/pip-pip-egg-info-fb_spmp0/misato_dataset.egg-info 2024-01-23T02:22:07,158 writing /tmp/pip-pip-egg-info-fb_spmp0/misato_dataset.egg-info/PKG-INFO 2024-01-23T02:22:07,162 writing dependency_links to /tmp/pip-pip-egg-info-fb_spmp0/misato_dataset.egg-info/dependency_links.txt 2024-01-23T02:22:07,164 writing requirements to /tmp/pip-pip-egg-info-fb_spmp0/misato_dataset.egg-info/requires.txt 2024-01-23T02:22:07,165 writing top-level names to /tmp/pip-pip-egg-info-fb_spmp0/misato_dataset.egg-info/top_level.txt 2024-01-23T02:22:07,166 writing manifest file '/tmp/pip-pip-egg-info-fb_spmp0/misato_dataset.egg-info/SOURCES.txt' 2024-01-23T02:22:07,241 reading manifest file '/tmp/pip-pip-egg-info-fb_spmp0/misato_dataset.egg-info/SOURCES.txt' 2024-01-23T02:22:07,243 adding license file 'LICENSE' 2024-01-23T02:22:07,245 writing manifest file '/tmp/pip-pip-egg-info-fb_spmp0/misato_dataset.egg-info/SOURCES.txt' 2024-01-23T02:22:07,351 Preparing metadata (setup.py): finished with status 'done' 2024-01-23T02:22:07,356 Source in /tmp/pip-wheel-x42y2hvl/misato-dataset_0a777a0a190a4d468cca061d7211ff0a has version 0.0.6, which satisfies requirement misato-dataset==0.0.6 from https://files.pythonhosted.org/packages/14/47/66fabf4e85649eddb321acc7fa636f0b39c2eae017d06526885cf0587fb8/misato-dataset-0.0.6.tar.gz 2024-01-23T02:22:07,357 Removed misato-dataset==0.0.6 from https://files.pythonhosted.org/packages/14/47/66fabf4e85649eddb321acc7fa636f0b39c2eae017d06526885cf0587fb8/misato-dataset-0.0.6.tar.gz from build tracker '/tmp/pip-build-tracker-cfgpmyg8' 2024-01-23T02:22:07,363 Created temporary directory: /tmp/pip-unpack-dr12x98w 2024-01-23T02:22:07,364 Created temporary directory: /tmp/pip-unpack-732venxj 2024-01-23T02:22:07,377 Building wheels for collected packages: misato-dataset 2024-01-23T02:22:07,381 Created temporary directory: /tmp/pip-wheel-e8c4bcu_ 2024-01-23T02:22:07,381 Building wheel for misato-dataset (setup.py): started 2024-01-23T02:22:07,383 Destination directory: /tmp/pip-wheel-e8c4bcu_ 2024-01-23T02:22:07,383 Running command python setup.py bdist_wheel 2024-01-23T02:22:07,847 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py:265: UserWarning: Unknown distribution option: 'extra_require' 2024-01-23T02:22:07,847 warnings.warn(msg) 2024-01-23T02:22:08,355 running bdist_wheel 2024-01-23T02:22:08,447 running build 2024-01-23T02:22:08,448 running build_py 2024-01-23T02:22:08,474 creating build 2024-01-23T02:22:08,474 creating build/lib 2024-01-23T02:22:08,475 creating build/lib/misato_dataset 2024-01-23T02:22:08,476 copying src/misato_dataset/qm_datamodule.py -> build/lib/misato_dataset 2024-01-23T02:22:08,478 copying src/misato_dataset/md_datamodule.py -> build/lib/misato_dataset 2024-01-23T02:22:08,480 copying src/misato_dataset/__init__.py -> build/lib/misato_dataset 2024-01-23T02:22:08,482 creating build/lib/misato_dataset/components 2024-01-23T02:22:08,483 copying src/misato_dataset/components/transformQM.py -> build/lib/misato_dataset/components 2024-01-23T02:22:08,484 copying src/misato_dataset/components/graph.py -> build/lib/misato_dataset/components 2024-01-23T02:22:08,486 copying src/misato_dataset/components/__init__.py -> build/lib/misato_dataset/components 2024-01-23T02:22:08,488 copying src/misato_dataset/components/datasets.py -> build/lib/misato_dataset/components 2024-01-23T02:22:08,489 copying src/misato_dataset/components/transforms.py -> build/lib/misato_dataset/components 2024-01-23T02:22:08,491 copying src/misato_dataset/components/utils.py -> build/lib/misato_dataset/components 2024-01-23T02:22:08,493 copying src/misato_dataset/components/transformMD.py -> build/lib/misato_dataset/components 2024-01-23T02:22:08,495 creating build/lib/misato_dataset/processing 2024-01-23T02:22:08,496 copying src/misato_dataset/processing/preprocessing_db.py -> build/lib/misato_dataset/processing 2024-01-23T02:22:08,498 copying src/misato_dataset/processing/inference_QM.py -> build/lib/misato_dataset/processing 2024-01-23T02:22:08,500 copying src/misato_dataset/processing/__init__.py -> build/lib/misato_dataset/processing 2024-01-23T02:22:08,502 copying src/misato_dataset/processing/h5_to_pdb.py -> build/lib/misato_dataset/processing 2024-01-23T02:22:08,503 copying src/misato_dataset/processing/pdb_to_h5.py -> build/lib/misato_dataset/processing 2024-01-23T02:22:08,532 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-01-23T02:22:08,532 !! 2024-01-23T02:22:08,534 ******************************************************************************** 2024-01-23T02:22:08,534 Please avoid running ``setup.py`` directly. 2024-01-23T02:22:08,535 Instead, use pypa/build, pypa/installer or other 2024-01-23T02:22:08,535 standards-based tools. 2024-01-23T02:22:08,537 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-01-23T02:22:08,537 ******************************************************************************** 2024-01-23T02:22:08,538 !! 2024-01-23T02:22:08,539 self.initialize_options() 2024-01-23T02:22:08,556 installing to build/bdist.linux-armv7l/wheel 2024-01-23T02:22:08,556 running install 2024-01-23T02:22:08,580 running install_lib 2024-01-23T02:22:08,603 creating build/bdist.linux-armv7l 2024-01-23T02:22:08,603 creating build/bdist.linux-armv7l/wheel 2024-01-23T02:22:08,605 creating build/bdist.linux-armv7l/wheel/misato_dataset 2024-01-23T02:22:08,606 copying build/lib/misato_dataset/qm_datamodule.py -> build/bdist.linux-armv7l/wheel/misato_dataset 2024-01-23T02:22:08,608 copying build/lib/misato_dataset/md_datamodule.py -> build/bdist.linux-armv7l/wheel/misato_dataset 2024-01-23T02:22:08,610 creating build/bdist.linux-armv7l/wheel/misato_dataset/components 2024-01-23T02:22:08,611 copying build/lib/misato_dataset/components/transformQM.py -> build/bdist.linux-armv7l/wheel/misato_dataset/components 2024-01-23T02:22:08,613 copying build/lib/misato_dataset/components/graph.py -> build/bdist.linux-armv7l/wheel/misato_dataset/components 2024-01-23T02:22:08,615 copying build/lib/misato_dataset/components/__init__.py -> build/bdist.linux-armv7l/wheel/misato_dataset/components 2024-01-23T02:22:08,617 copying build/lib/misato_dataset/components/datasets.py -> build/bdist.linux-armv7l/wheel/misato_dataset/components 2024-01-23T02:22:08,619 copying build/lib/misato_dataset/components/transforms.py -> build/bdist.linux-armv7l/wheel/misato_dataset/components 2024-01-23T02:22:08,621 copying build/lib/misato_dataset/components/utils.py -> build/bdist.linux-armv7l/wheel/misato_dataset/components 2024-01-23T02:22:08,622 copying build/lib/misato_dataset/components/transformMD.py -> build/bdist.linux-armv7l/wheel/misato_dataset/components 2024-01-23T02:22:08,624 copying build/lib/misato_dataset/__init__.py -> build/bdist.linux-armv7l/wheel/misato_dataset 2024-01-23T02:22:08,626 creating build/bdist.linux-armv7l/wheel/misato_dataset/processing 2024-01-23T02:22:08,627 copying build/lib/misato_dataset/processing/preprocessing_db.py -> build/bdist.linux-armv7l/wheel/misato_dataset/processing 2024-01-23T02:22:08,629 copying build/lib/misato_dataset/processing/inference_QM.py -> build/bdist.linux-armv7l/wheel/misato_dataset/processing 2024-01-23T02:22:08,631 copying build/lib/misato_dataset/processing/__init__.py -> build/bdist.linux-armv7l/wheel/misato_dataset/processing 2024-01-23T02:22:08,633 copying build/lib/misato_dataset/processing/h5_to_pdb.py -> build/bdist.linux-armv7l/wheel/misato_dataset/processing 2024-01-23T02:22:08,635 copying build/lib/misato_dataset/processing/pdb_to_h5.py -> build/bdist.linux-armv7l/wheel/misato_dataset/processing 2024-01-23T02:22:08,636 running install_egg_info 2024-01-23T02:22:08,694 running egg_info 2024-01-23T02:22:08,717 writing src/misato_dataset.egg-info/PKG-INFO 2024-01-23T02:22:08,720 writing dependency_links to src/misato_dataset.egg-info/dependency_links.txt 2024-01-23T02:22:08,722 writing requirements to src/misato_dataset.egg-info/requires.txt 2024-01-23T02:22:08,723 writing top-level names to src/misato_dataset.egg-info/top_level.txt 2024-01-23T02:22:08,751 reading manifest file 'src/misato_dataset.egg-info/SOURCES.txt' 2024-01-23T02:22:08,753 adding license file 'LICENSE' 2024-01-23T02:22:08,755 writing manifest file 'src/misato_dataset.egg-info/SOURCES.txt' 2024-01-23T02:22:08,757 Copying src/misato_dataset.egg-info to build/bdist.linux-armv7l/wheel/misato_dataset-0.0.6-py3.11.egg-info 2024-01-23T02:22:08,766 running install_scripts 2024-01-23T02:22:08,782 creating build/bdist.linux-armv7l/wheel/misato_dataset-0.0.6.dist-info/WHEEL 2024-01-23T02:22:08,784 creating '/tmp/pip-wheel-e8c4bcu_/misato_dataset-0.0.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-23T02:22:08,786 adding 'misato_dataset/__init__.py' 2024-01-23T02:22:08,787 adding 'misato_dataset/md_datamodule.py' 2024-01-23T02:22:08,789 adding 'misato_dataset/qm_datamodule.py' 2024-01-23T02:22:08,791 adding 'misato_dataset/components/__init__.py' 2024-01-23T02:22:08,792 adding 'misato_dataset/components/datasets.py' 2024-01-23T02:22:08,794 adding 'misato_dataset/components/graph.py' 2024-01-23T02:22:08,796 adding 'misato_dataset/components/transformMD.py' 2024-01-23T02:22:08,797 adding 'misato_dataset/components/transformQM.py' 2024-01-23T02:22:08,799 adding 'misato_dataset/components/transforms.py' 2024-01-23T02:22:08,800 adding 'misato_dataset/components/utils.py' 2024-01-23T02:22:08,801 adding 'misato_dataset/processing/__init__.py' 2024-01-23T02:22:08,803 adding 'misato_dataset/processing/h5_to_pdb.py' 2024-01-23T02:22:08,805 adding 'misato_dataset/processing/inference_QM.py' 2024-01-23T02:22:08,806 adding 'misato_dataset/processing/pdb_to_h5.py' 2024-01-23T02:22:08,808 adding 'misato_dataset/processing/preprocessing_db.py' 2024-01-23T02:22:08,813 adding 'misato_dataset-0.0.6.dist-info/LICENSE' 2024-01-23T02:22:08,815 adding 'misato_dataset-0.0.6.dist-info/METADATA' 2024-01-23T02:22:08,816 adding 'misato_dataset-0.0.6.dist-info/WHEEL' 2024-01-23T02:22:08,817 adding 'misato_dataset-0.0.6.dist-info/top_level.txt' 2024-01-23T02:22:08,818 adding 'misato_dataset-0.0.6.dist-info/RECORD' 2024-01-23T02:22:08,820 removing build/bdist.linux-armv7l/wheel 2024-01-23T02:22:08,934 Building wheel for misato-dataset (setup.py): finished with status 'done' 2024-01-23T02:22:08,938 Created wheel for misato-dataset: filename=misato_dataset-0.0.6-py3-none-any.whl size=38206 sha256=26007d360e3a9e4ff049ac248b7782522a5d8ac978eace13dd936a0220f9b8b1 2024-01-23T02:22:08,939 Stored in directory: /tmp/pip-ephem-wheel-cache-6u6vx2_c/wheels/57/24/f1/8258ebc0c9b7b22f44ce0be46ad6e12cad62611797fd69f1e9 2024-01-23T02:22:08,950 Successfully built misato-dataset 2024-01-23T02:22:08,954 Removed build tracker: '/tmp/pip-build-tracker-cfgpmyg8'