2024-01-30T21:11:29,037 Created temporary directory: /tmp/pip-build-tracker-qchtc3vp 2024-01-30T21:11:29,038 Initialized build tracking at /tmp/pip-build-tracker-qchtc3vp 2024-01-30T21:11:29,038 Created build tracker: /tmp/pip-build-tracker-qchtc3vp 2024-01-30T21:11:29,039 Entered build tracker: /tmp/pip-build-tracker-qchtc3vp 2024-01-30T21:11:29,040 Created temporary directory: /tmp/pip-wheel-8gq628gz 2024-01-30T21:11:29,043 Created temporary directory: /tmp/pip-ephem-wheel-cache-_l4zxzp2 2024-01-30T21:11:29,065 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-30T21:11:29,068 2 location(s) to search for versions of xi-mzidentml-converter: 2024-01-30T21:11:29,068 * https://pypi.org/simple/xi-mzidentml-converter/ 2024-01-30T21:11:29,068 * https://www.piwheels.org/simple/xi-mzidentml-converter/ 2024-01-30T21:11:29,069 Fetching project page and analyzing links: https://pypi.org/simple/xi-mzidentml-converter/ 2024-01-30T21:11:29,070 Getting page https://pypi.org/simple/xi-mzidentml-converter/ 2024-01-30T21:11:29,071 Found index url https://pypi.org/simple/ 2024-01-30T21:11:29,283 Fetched page https://pypi.org/simple/xi-mzidentml-converter/ as application/vnd.pypi.simple.v1+json 2024-01-30T21:11:29,288 Found link https://files.pythonhosted.org/packages/c8/03/0457ae4d58a3d3d75df9dbbc3bc857889bd2233810af7481a02a9762e06e/xi-mzidentml-converter-0.1.2.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/), version: 0.1.2 2024-01-30T21:11:29,289 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/8c/3b/03149101a516f31b0efbb394166cecf430a3e5aa715f141107f1d37d1553/xi_mzidentml_converter-0.1.2-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) 2024-01-30T21:11:29,290 Found link https://files.pythonhosted.org/packages/ae/50/96fe7775f6ff643b7e733b31acf33138d9f0717fdd2ef707bc0fc2eecc44/xi-mzidentml-converter-0.1.4.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.4 2024-01-30T21:11:29,290 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/d7/7b/11cb680f51ef13d535715b5b914b47dd3c6b82c5ea800c45ce681e72651b/xi_mzidentml_converter-0.1.4-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,291 Found link https://files.pythonhosted.org/packages/f2/34/964f6f74be628a3fdd99eaa5e987cb1da330e5895612448e61c1e175e761/xi-mzidentml-converter-0.1.5.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.5 2024-01-30T21:11:29,292 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/e3/34/619645fc9faaef75156e1bc8cf1e9776439408fdb880ecafb312b9a35302/xi_mzidentml_converter-0.1.5-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,293 Found link https://files.pythonhosted.org/packages/48/b6/8782f32ecdf4bce43a7cb153b5fb1f2e63282a045276ce56e1fbd98ace1e/xi-mzidentml-converter-0.1.6.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.6 2024-01-30T21:11:29,294 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/14/a3/80177b80af1a739d5dff43acfaf1d5973245d2a39c90f8f812002e64e4e1/xi_mzidentml_converter-0.1.6-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,295 Found link https://files.pythonhosted.org/packages/28/0a/9480b05778a6b1f45e2cf7247a442ed3c572b2532795d1844f8963cf7f68/xi-mzidentml-converter-0.1.7.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.7 2024-01-30T21:11:29,295 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/9a/0e/7bd2616134ae097891189a83265a40aa29813499683efbe23940e7c7156c/xi_mzidentml_converter-0.1.7-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,296 Found link https://files.pythonhosted.org/packages/e0/43/70d669ba87d1a4353f3f88e7c0ca551d5b27b3085e7c3b20adde029eceef/xi-mzidentml-converter-0.1.9.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.9 2024-01-30T21:11:29,297 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/2d/87/0c91bcc2532f7de3cdd520aa69dab66dafffc946a84fefecd1ef7ff4c7dd/xi_mzidentml_converter-0.1.9-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,298 Found link https://files.pythonhosted.org/packages/71/6c/444004d73a3cf6c679057f476b8ac8df70e462fd2e9ed410d63fae42a6f0/xi-mzidentml-converter-0.1.10.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.10 2024-01-30T21:11:29,299 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/c7/cc/1adc8935991b0a09aeb7bb0dcae115f586e943369f31276ccdd21b6d2e4a/xi_mzidentml_converter-0.1.10-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,299 Found link https://files.pythonhosted.org/packages/64/6e/edf0a2f35d5b218e2da539073ab9525f8098f3734ea01e0d1546048eceb4/xi-mzidentml-converter-0.1.11.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.11 2024-01-30T21:11:29,300 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/46/ec/aaf5fc54ecd8e14c28dcdeebdb3cfc6c785d19c3bbb81a724bfcd8704be6/xi_mzidentml_converter-0.1.11-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,301 Found link https://files.pythonhosted.org/packages/2e/da/51f2a92d9d4f209b40923c89d2f06ac03d2fac10f91a588407e98d6fefb4/xi-mzidentml-converter-0.1.12.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.12 2024-01-30T21:11:29,301 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/2c/cb/14f9942bb0e60f3666af0d991461bf372902435270e2b96e382428078040/xi_mzidentml_converter-0.1.12-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,302 Found link https://files.pythonhosted.org/packages/65/b8/6e0756b7d78a918d9296bb4903e47a548f03873e5cfeaa68472ab1ca35a6/xi-mzidentml-converter-0.1.13.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.13 2024-01-30T21:11:29,303 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/79/31/e872c36e570ed8ed23d2b7e1cf6af817a6b27aab4a6611d0f0dc620d8658/xi_mzidentml_converter-0.1.13-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,304 Found link https://files.pythonhosted.org/packages/c4/33/cfe5c90255977a143be80b89b03e28f92e88138b5ba9b01ff41ed8a8013c/xi-mzidentml-converter-0.1.14.tar.gz (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10), version: 0.1.14 2024-01-30T21:11:29,305 Skipping link: No binaries permitted for xi-mzidentml-converter: https://files.pythonhosted.org/packages/11/d3/ae32f6933648767ce055e0f7222c290c9ba2e6294f44f6b559c7518877b4/xi_mzidentml_converter-0.1.14-py3-none-any.whl (from https://pypi.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,305 Fetching project page and analyzing links: https://www.piwheels.org/simple/xi-mzidentml-converter/ 2024-01-30T21:11:29,306 Getting page https://www.piwheels.org/simple/xi-mzidentml-converter/ 2024-01-30T21:11:29,307 Found index url https://www.piwheels.org/simple/ 2024-01-30T21:11:29,459 Fetched page https://www.piwheels.org/simple/xi-mzidentml-converter/ as text/html 2024-01-30T21:11:29,463 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.13-py3-none-any.whl#sha256=e38d30339b98457c24320784338c8073bcc239058186fdf6cef109c1dda18aa3 (from https://www.piwheels.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,464 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.12-py3-none-any.whl#sha256=87b81a19cacc11c87a58bedf0e7012b34f4c15803eee9f3bd898e07b1311a76b (from https://www.piwheels.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,465 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.11-py3-none-any.whl#sha256=7447138546a350a8bcf217f0e1a209078f130f128d1320acfcb1f1ac2536c6d4 (from https://www.piwheels.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,466 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.10-py3-none-any.whl#sha256=29086e57635f08e188c054a7b33aebb272894eca81c8187f63ea08661ba4ce2c (from https://www.piwheels.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,466 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.9-py3-none-any.whl#sha256=fdbd672f8b32d33ed5c8ea363b43c3e97c7fe7048340d306fbe11f1a8ecc2533 (from https://www.piwheels.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,466 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.7-py3-none-any.whl#sha256=0ff2d80ab7640857396fe829dda2edca72910e1c6223c738d44ce2cf03334e78 (from https://www.piwheels.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,467 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.6-py3-none-any.whl#sha256=3512ec69a491aee62998f6f5738342fce91986b24bdcd41b16f7dea6b980cd1c (from https://www.piwheels.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,467 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.5-py3-none-any.whl#sha256=d81eaf0369b57b2a50015f59ffbd3ad17d6a7f23a7dfcfec5bbf67a8e9bc5f61 (from https://www.piwheels.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,468 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.4-py3-none-any.whl#sha256=17fb8bdc3eea40cb29df3ef98ed48bf056c2c54077b63afabb9d4502dcb8f0ac (from https://www.piwheels.org/simple/xi-mzidentml-converter/) (requires-python:>=3.10) 2024-01-30T21:11:29,469 Skipping link: No binaries permitted for xi-mzidentml-converter: https://www.piwheels.org/simple/xi-mzidentml-converter/xi_mzidentml_converter-0.1.2-py3-none-any.whl#sha256=b450a1c6183c7be598abb8954ed7d44e412e844d4b19f1cd0bb63f3cdb942178 (from https://www.piwheels.org/simple/xi-mzidentml-converter/) 2024-01-30T21:11:29,469 Skipping link: not a file: https://www.piwheels.org/simple/xi-mzidentml-converter/ 2024-01-30T21:11:29,470 Skipping link: not a file: https://pypi.org/simple/xi-mzidentml-converter/ 2024-01-30T21:11:29,489 Given no hashes to check 1 links for project 'xi-mzidentml-converter': discarding no candidates 2024-01-30T21:11:29,507 Collecting xi-mzidentml-converter==0.1.14 2024-01-30T21:11:29,509 Created temporary directory: /tmp/pip-unpack-f_itprsy 2024-01-30T21:11:29,733 Downloading xi-mzidentml-converter-0.1.14.tar.gz (47 kB) 2024-01-30T21:11:29,883 Added xi-mzidentml-converter==0.1.14 from https://files.pythonhosted.org/packages/c4/33/cfe5c90255977a143be80b89b03e28f92e88138b5ba9b01ff41ed8a8013c/xi-mzidentml-converter-0.1.14.tar.gz to build tracker '/tmp/pip-build-tracker-qchtc3vp' 2024-01-30T21:11:29,884 Running setup.py (path:/tmp/pip-wheel-8gq628gz/xi-mzidentml-converter_4651a0af79374cdf867d8d67f1078981/setup.py) egg_info for package xi-mzidentml-converter 2024-01-30T21:11:29,886 Created temporary directory: /tmp/pip-pip-egg-info-n1cye8yz 2024-01-30T21:11:29,886 Preparing metadata (setup.py): started 2024-01-30T21:11:29,887 Running command python setup.py egg_info 2024-01-30T21:11:30,880 running egg_info 2024-01-30T21:11:30,881 creating /tmp/pip-pip-egg-info-n1cye8yz/xi_mzidentml_converter.egg-info 2024-01-30T21:11:30,905 writing /tmp/pip-pip-egg-info-n1cye8yz/xi_mzidentml_converter.egg-info/PKG-INFO 2024-01-30T21:11:30,908 writing dependency_links to /tmp/pip-pip-egg-info-n1cye8yz/xi_mzidentml_converter.egg-info/dependency_links.txt 2024-01-30T21:11:30,910 writing entry points to /tmp/pip-pip-egg-info-n1cye8yz/xi_mzidentml_converter.egg-info/entry_points.txt 2024-01-30T21:11:30,911 writing requirements to /tmp/pip-pip-egg-info-n1cye8yz/xi_mzidentml_converter.egg-info/requires.txt 2024-01-30T21:11:30,912 writing top-level names to /tmp/pip-pip-egg-info-n1cye8yz/xi_mzidentml_converter.egg-info/top_level.txt 2024-01-30T21:11:30,914 writing manifest file '/tmp/pip-pip-egg-info-n1cye8yz/xi_mzidentml_converter.egg-info/SOURCES.txt' 2024-01-30T21:11:30,998 reading manifest file '/tmp/pip-pip-egg-info-n1cye8yz/xi_mzidentml_converter.egg-info/SOURCES.txt' 2024-01-30T21:11:30,999 adding license file 'LICENSE.md' 2024-01-30T21:11:31,002 writing manifest file '/tmp/pip-pip-egg-info-n1cye8yz/xi_mzidentml_converter.egg-info/SOURCES.txt' 2024-01-30T21:11:31,111 Preparing metadata (setup.py): finished with status 'done' 2024-01-30T21:11:31,116 Source in /tmp/pip-wheel-8gq628gz/xi-mzidentml-converter_4651a0af79374cdf867d8d67f1078981 has version 0.1.14, which satisfies requirement xi-mzidentml-converter==0.1.14 from https://files.pythonhosted.org/packages/c4/33/cfe5c90255977a143be80b89b03e28f92e88138b5ba9b01ff41ed8a8013c/xi-mzidentml-converter-0.1.14.tar.gz 2024-01-30T21:11:31,117 Removed xi-mzidentml-converter==0.1.14 from https://files.pythonhosted.org/packages/c4/33/cfe5c90255977a143be80b89b03e28f92e88138b5ba9b01ff41ed8a8013c/xi-mzidentml-converter-0.1.14.tar.gz from build tracker '/tmp/pip-build-tracker-qchtc3vp' 2024-01-30T21:11:31,123 Created temporary directory: /tmp/pip-unpack-amyiyhjh 2024-01-30T21:11:31,124 Created temporary directory: /tmp/pip-unpack-ccfc_cqt 2024-01-30T21:11:31,147 Building wheels for collected packages: xi-mzidentml-converter 2024-01-30T21:11:31,151 Created temporary directory: /tmp/pip-wheel-dwmnkino 2024-01-30T21:11:31,152 Building wheel for xi-mzidentml-converter (setup.py): started 2024-01-30T21:11:31,153 Destination directory: /tmp/pip-wheel-dwmnkino 2024-01-30T21:11:31,154 Running command python setup.py bdist_wheel 2024-01-30T21:11:32,131 running bdist_wheel 2024-01-30T21:11:32,225 running build 2024-01-30T21:11:32,226 running build_py 2024-01-30T21:11:32,253 creating build 2024-01-30T21:11:32,253 creating build/lib 2024-01-30T21:11:32,254 creating build/lib/config 2024-01-30T21:11:32,255 copying config/index.py -> build/lib/config 2024-01-30T21:11:32,257 copying config/config_parser.py -> build/lib/config 2024-01-30T21:11:32,259 copying config/__init__.py -> build/lib/config 2024-01-30T21:11:32,261 copying config/database.py -> build/lib/config 2024-01-30T21:11:32,263 creating build/lib/models 2024-01-30T21:11:32,264 copying models/analysiscollection.py -> build/lib/models 2024-01-30T21:11:32,266 copying models/dbsequence.py -> build/lib/models 2024-01-30T21:11:32,267 copying models/base.py -> build/lib/models 2024-01-30T21:11:32,269 copying models/enzyme.py -> build/lib/models 2024-01-30T21:11:32,271 copying models/index.py -> build/lib/models 2024-01-30T21:11:32,273 copying models/spectrum.py -> build/lib/models 2024-01-30T21:11:32,274 copying models/spectrumidentificationprotocol.py -> build/lib/models 2024-01-30T21:11:32,276 copying models/projectdetail.py -> build/lib/models 2024-01-30T21:11:32,278 copying models/peptideevidence.py -> build/lib/models 2024-01-30T21:11:32,279 copying models/searchmodification.py -> build/lib/models 2024-01-30T21:11:32,281 copying models/modifiedpeptide.py -> build/lib/models 2024-01-30T21:11:32,282 copying models/upload.py -> build/lib/models 2024-01-30T21:11:32,284 copying models/__init__.py -> build/lib/models 2024-01-30T21:11:32,285 copying models/projectsubdetail.py -> build/lib/models 2024-01-30T21:11:32,287 copying models/spectrumidentification.py -> build/lib/models 2024-01-30T21:11:32,289 creating build/lib/tests 2024-01-30T21:11:32,290 copying tests/test_CsvParsers.py -> build/lib/tests 2024-01-30T21:11:32,293 copying tests/parse_mzid.py -> build/lib/tests 2024-01-30T21:11:32,295 copying tests/compare.py -> build/lib/tests 2024-01-30T21:11:32,296 copying tests/parse_csv.py -> build/lib/tests 2024-01-30T21:11:32,298 copying tests/test_fasta_reader.py -> build/lib/tests 2024-01-30T21:11:32,299 copying tests/test_MzIdParser_matrixscience.py -> build/lib/tests 2024-01-30T21:11:32,302 copying tests/db_pytest_fixtures.py -> build/lib/tests 2024-01-30T21:11:32,304 copying tests/test_MzIdParser_ecoli_dsso.py -> build/lib/tests 2024-01-30T21:11:32,306 copying tests/__init__.py -> build/lib/tests 2024-01-30T21:11:32,308 copying tests/test_MzIdParser_matrixscience2.py -> build/lib/tests 2024-01-30T21:11:32,310 creating build/lib/parser 2024-01-30T21:11:32,311 copying parser/MzIdParser.py -> build/lib/parser 2024-01-30T21:11:32,314 copying parser/api_writer.py -> build/lib/parser 2024-01-30T21:11:32,316 copying parser/NumpyEncoder.py -> build/lib/parser 2024-01-30T21:11:32,318 copying parser/database_writer.py -> build/lib/parser 2024-01-30T21:11:32,319 copying parser/writer.py -> build/lib/parser 2024-01-30T21:11:32,321 copying parser/SimpleFASTA.py -> build/lib/parser 2024-01-30T21:11:32,323 copying parser/process_dataset.py -> build/lib/parser 2024-01-30T21:11:32,325 copying parser/__init__.py -> build/lib/parser 2024-01-30T21:11:32,327 creating build/lib/parser/peaklistReader 2024-01-30T21:11:32,328 copying parser/peaklistReader/PeakListWrapper.py -> build/lib/parser/peaklistReader 2024-01-30T21:11:32,330 copying parser/peaklistReader/__init__.py -> build/lib/parser/peaklistReader 2024-01-30T21:11:32,332 creating build/lib/parser/database 2024-01-30T21:11:32,332 copying parser/database/create_db_schema.py -> build/lib/parser/database 2024-01-30T21:11:32,334 copying parser/database/guid.py -> build/lib/parser/database 2024-01-30T21:11:32,336 copying parser/database/__init__.py -> build/lib/parser/database 2024-01-30T21:11:32,337 copying parser/database/update_sqlite.py -> build/lib/parser/database 2024-01-30T21:11:32,339 creating build/lib/parser/csv_parser 2024-01-30T21:11:32,340 copying parser/csv_parser/LinksOnlyCsvParser.py -> build/lib/parser/csv_parser 2024-01-30T21:11:32,343 copying parser/csv_parser/NoPeakListsCsvParser.py -> build/lib/parser/csv_parser 2024-01-30T21:11:32,344 copying parser/csv_parser/FullCsvParser.py -> build/lib/parser/csv_parser 2024-01-30T21:11:32,347 copying parser/csv_parser/xiSPEC_CsvParser.py -> build/lib/parser/csv_parser 2024-01-30T21:11:32,348 copying parser/csv_parser/AbstractCsvParser.py -> build/lib/parser/csv_parser 2024-01-30T21:11:32,351 copying parser/csv_parser/__init__.py -> build/lib/parser/csv_parser 2024-01-30T21:11:32,382 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-01-30T21:11:32,383 !! 2024-01-30T21:11:32,384 ******************************************************************************** 2024-01-30T21:11:32,385 Please avoid running ``setup.py`` directly. 2024-01-30T21:11:32,385 Instead, use pypa/build, pypa/installer or other 2024-01-30T21:11:32,386 standards-based tools. 2024-01-30T21:11:32,388 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-01-30T21:11:32,388 ******************************************************************************** 2024-01-30T21:11:32,389 !! 2024-01-30T21:11:32,390 self.initialize_options() 2024-01-30T21:11:32,408 installing to build/bdist.linux-armv7l/wheel 2024-01-30T21:11:32,409 running install 2024-01-30T21:11:32,432 running install_lib 2024-01-30T21:11:32,456 creating build/bdist.linux-armv7l 2024-01-30T21:11:32,456 creating build/bdist.linux-armv7l/wheel 2024-01-30T21:11:32,458 creating build/bdist.linux-armv7l/wheel/config 2024-01-30T21:11:32,459 copying build/lib/config/index.py -> build/bdist.linux-armv7l/wheel/config 2024-01-30T21:11:32,460 copying build/lib/config/config_parser.py -> build/bdist.linux-armv7l/wheel/config 2024-01-30T21:11:32,462 copying build/lib/config/__init__.py -> build/bdist.linux-armv7l/wheel/config 2024-01-30T21:11:32,463 copying build/lib/config/database.py -> build/bdist.linux-armv7l/wheel/config 2024-01-30T21:11:32,465 creating build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,466 copying build/lib/models/analysiscollection.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,468 copying build/lib/models/dbsequence.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,469 copying build/lib/models/base.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,471 copying build/lib/models/enzyme.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,473 copying build/lib/models/index.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,474 copying build/lib/models/spectrum.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,476 copying build/lib/models/spectrumidentificationprotocol.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,477 copying build/lib/models/projectdetail.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,479 copying build/lib/models/peptideevidence.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,481 copying build/lib/models/searchmodification.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,483 copying build/lib/models/modifiedpeptide.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,485 copying build/lib/models/upload.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,486 copying build/lib/models/__init__.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,488 copying build/lib/models/projectsubdetail.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,490 copying build/lib/models/spectrumidentification.py -> build/bdist.linux-armv7l/wheel/models 2024-01-30T21:11:32,492 creating build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,493 copying build/lib/tests/test_CsvParsers.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,496 copying build/lib/tests/parse_mzid.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,497 copying build/lib/tests/compare.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,499 copying build/lib/tests/parse_csv.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,501 copying build/lib/tests/test_fasta_reader.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,503 copying build/lib/tests/test_MzIdParser_matrixscience.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,505 copying build/lib/tests/db_pytest_fixtures.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,507 copying build/lib/tests/test_MzIdParser_ecoli_dsso.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,509 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,511 copying build/lib/tests/test_MzIdParser_matrixscience2.py -> build/bdist.linux-armv7l/wheel/tests 2024-01-30T21:11:32,514 creating build/bdist.linux-armv7l/wheel/parser 2024-01-30T21:11:32,514 copying build/lib/parser/MzIdParser.py -> build/bdist.linux-armv7l/wheel/parser 2024-01-30T21:11:32,518 copying build/lib/parser/api_writer.py -> build/bdist.linux-armv7l/wheel/parser 2024-01-30T21:11:32,520 copying build/lib/parser/NumpyEncoder.py -> build/bdist.linux-armv7l/wheel/parser 2024-01-30T21:11:32,522 creating build/bdist.linux-armv7l/wheel/parser/peaklistReader 2024-01-30T21:11:32,523 copying build/lib/parser/peaklistReader/PeakListWrapper.py -> build/bdist.linux-armv7l/wheel/parser/peaklistReader 2024-01-30T21:11:32,525 copying build/lib/parser/peaklistReader/__init__.py -> build/bdist.linux-armv7l/wheel/parser/peaklistReader 2024-01-30T21:11:32,526 copying build/lib/parser/database_writer.py -> build/bdist.linux-armv7l/wheel/parser 2024-01-30T21:11:32,528 copying build/lib/parser/writer.py -> build/bdist.linux-armv7l/wheel/parser 2024-01-30T21:11:32,530 creating build/bdist.linux-armv7l/wheel/parser/database 2024-01-30T21:11:32,531 copying build/lib/parser/database/create_db_schema.py -> build/bdist.linux-armv7l/wheel/parser/database 2024-01-30T21:11:32,533 copying build/lib/parser/database/guid.py -> build/bdist.linux-armv7l/wheel/parser/database 2024-01-30T21:11:32,534 copying build/lib/parser/database/__init__.py -> build/bdist.linux-armv7l/wheel/parser/database 2024-01-30T21:11:32,536 copying build/lib/parser/database/update_sqlite.py -> build/bdist.linux-armv7l/wheel/parser/database 2024-01-30T21:11:32,537 copying build/lib/parser/SimpleFASTA.py -> build/bdist.linux-armv7l/wheel/parser 2024-01-30T21:11:32,539 creating build/bdist.linux-armv7l/wheel/parser/csv_parser 2024-01-30T21:11:32,540 copying build/lib/parser/csv_parser/LinksOnlyCsvParser.py -> build/bdist.linux-armv7l/wheel/parser/csv_parser 2024-01-30T21:11:32,543 copying build/lib/parser/csv_parser/NoPeakListsCsvParser.py -> build/bdist.linux-armv7l/wheel/parser/csv_parser 2024-01-30T21:11:32,544 copying build/lib/parser/csv_parser/FullCsvParser.py -> build/bdist.linux-armv7l/wheel/parser/csv_parser 2024-01-30T21:11:32,547 copying build/lib/parser/csv_parser/xiSPEC_CsvParser.py -> build/bdist.linux-armv7l/wheel/parser/csv_parser 2024-01-30T21:11:32,549 copying build/lib/parser/csv_parser/AbstractCsvParser.py -> build/bdist.linux-armv7l/wheel/parser/csv_parser 2024-01-30T21:11:32,551 copying build/lib/parser/csv_parser/__init__.py -> build/bdist.linux-armv7l/wheel/parser/csv_parser 2024-01-30T21:11:32,552 copying build/lib/parser/process_dataset.py -> build/bdist.linux-armv7l/wheel/parser 2024-01-30T21:11:32,554 copying build/lib/parser/__init__.py -> build/bdist.linux-armv7l/wheel/parser 2024-01-30T21:11:32,556 running install_egg_info 2024-01-30T21:11:32,616 running egg_info 2024-01-30T21:11:32,640 writing xi_mzidentml_converter.egg-info/PKG-INFO 2024-01-30T21:11:32,643 writing dependency_links to xi_mzidentml_converter.egg-info/dependency_links.txt 2024-01-30T21:11:32,644 writing entry points to xi_mzidentml_converter.egg-info/entry_points.txt 2024-01-30T21:11:32,646 writing requirements to xi_mzidentml_converter.egg-info/requires.txt 2024-01-30T21:11:32,647 writing top-level names to xi_mzidentml_converter.egg-info/top_level.txt 2024-01-30T21:11:32,679 reading manifest file 'xi_mzidentml_converter.egg-info/SOURCES.txt' 2024-01-30T21:11:32,682 adding license file 'LICENSE.md' 2024-01-30T21:11:32,685 writing manifest file 'xi_mzidentml_converter.egg-info/SOURCES.txt' 2024-01-30T21:11:32,687 Copying xi_mzidentml_converter.egg-info to build/bdist.linux-armv7l/wheel/xi_mzidentml_converter-0.1.14-py3.11.egg-info 2024-01-30T21:11:32,698 running install_scripts 2024-01-30T21:11:32,717 creating build/bdist.linux-armv7l/wheel/xi_mzidentml_converter-0.1.14.dist-info/WHEEL 2024-01-30T21:11:32,720 creating '/tmp/pip-wheel-dwmnkino/xi_mzidentml_converter-0.1.14-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-30T21:11:32,722 adding 'config/__init__.py' 2024-01-30T21:11:32,723 adding 'config/config_parser.py' 2024-01-30T21:11:32,725 adding 'config/database.py' 2024-01-30T21:11:32,726 adding 'config/index.py' 2024-01-30T21:11:32,728 adding 'models/__init__.py' 2024-01-30T21:11:32,729 adding 'models/analysiscollection.py' 2024-01-30T21:11:32,730 adding 'models/base.py' 2024-01-30T21:11:32,731 adding 'models/dbsequence.py' 2024-01-30T21:11:32,732 adding 'models/enzyme.py' 2024-01-30T21:11:32,733 adding 'models/index.py' 2024-01-30T21:11:32,734 adding 'models/modifiedpeptide.py' 2024-01-30T21:11:32,735 adding 'models/peptideevidence.py' 2024-01-30T21:11:32,737 adding 'models/projectdetail.py' 2024-01-30T21:11:32,738 adding 'models/projectsubdetail.py' 2024-01-30T21:11:32,739 adding 'models/searchmodification.py' 2024-01-30T21:11:32,740 adding 'models/spectrum.py' 2024-01-30T21:11:32,741 adding 'models/spectrumidentification.py' 2024-01-30T21:11:32,742 adding 'models/spectrumidentificationprotocol.py' 2024-01-30T21:11:32,744 adding 'models/upload.py' 2024-01-30T21:11:32,748 adding 'parser/MzIdParser.py' 2024-01-30T21:11:32,750 adding 'parser/NumpyEncoder.py' 2024-01-30T21:11:32,751 adding 'parser/SimpleFASTA.py' 2024-01-30T21:11:32,752 adding 'parser/__init__.py' 2024-01-30T21:11:32,754 adding 'parser/api_writer.py' 2024-01-30T21:11:32,755 adding 'parser/database_writer.py' 2024-01-30T21:11:32,757 adding 'parser/process_dataset.py' 2024-01-30T21:11:32,758 adding 'parser/writer.py' 2024-01-30T21:11:32,761 adding 'parser/csv_parser/AbstractCsvParser.py' 2024-01-30T21:11:32,763 adding 'parser/csv_parser/FullCsvParser.py' 2024-01-30T21:11:32,765 adding 'parser/csv_parser/LinksOnlyCsvParser.py' 2024-01-30T21:11:32,766 adding 'parser/csv_parser/NoPeakListsCsvParser.py' 2024-01-30T21:11:32,767 adding 'parser/csv_parser/__init__.py' 2024-01-30T21:11:32,769 adding 'parser/csv_parser/xiSPEC_CsvParser.py' 2024-01-30T21:11:32,770 adding 'parser/database/__init__.py' 2024-01-30T21:11:32,771 adding 'parser/database/create_db_schema.py' 2024-01-30T21:11:32,772 adding 'parser/database/guid.py' 2024-01-30T21:11:32,774 adding 'parser/database/update_sqlite.py' 2024-01-30T21:11:32,776 adding 'parser/peaklistReader/PeakListWrapper.py' 2024-01-30T21:11:32,777 adding 'parser/peaklistReader/__init__.py' 2024-01-30T21:11:32,779 adding 'tests/__init__.py' 2024-01-30T21:11:32,780 adding 'tests/compare.py' 2024-01-30T21:11:32,781 adding 'tests/db_pytest_fixtures.py' 2024-01-30T21:11:32,783 adding 'tests/parse_csv.py' 2024-01-30T21:11:32,784 adding 'tests/parse_mzid.py' 2024-01-30T21:11:32,786 adding 'tests/test_CsvParsers.py' 2024-01-30T21:11:32,788 adding 'tests/test_MzIdParser_ecoli_dsso.py' 2024-01-30T21:11:32,790 adding 'tests/test_MzIdParser_matrixscience.py' 2024-01-30T21:11:32,792 adding 'tests/test_MzIdParser_matrixscience2.py' 2024-01-30T21:11:32,793 adding 'tests/test_fasta_reader.py' 2024-01-30T21:11:32,796 adding 'xi_mzidentml_converter-0.1.14.dist-info/LICENSE.md' 2024-01-30T21:11:32,797 adding 'xi_mzidentml_converter-0.1.14.dist-info/METADATA' 2024-01-30T21:11:32,798 adding 'xi_mzidentml_converter-0.1.14.dist-info/WHEEL' 2024-01-30T21:11:32,799 adding 'xi_mzidentml_converter-0.1.14.dist-info/entry_points.txt' 2024-01-30T21:11:32,800 adding 'xi_mzidentml_converter-0.1.14.dist-info/top_level.txt' 2024-01-30T21:11:32,802 adding 'xi_mzidentml_converter-0.1.14.dist-info/RECORD' 2024-01-30T21:11:32,804 removing build/bdist.linux-armv7l/wheel 2024-01-30T21:11:32,928 Building wheel for xi-mzidentml-converter (setup.py): finished with status 'done' 2024-01-30T21:11:32,931 Created wheel for xi-mzidentml-converter: filename=xi_mzidentml_converter-0.1.14-py3-none-any.whl size=63199 sha256=f0139dd6ea64de23c50337a3c062df87ea836942a5d75f9e1fae1f5da6dc1518 2024-01-30T21:11:32,933 Stored in directory: /tmp/pip-ephem-wheel-cache-_l4zxzp2/wheels/1f/6e/94/966dd9980600bb90ea54f654b8ab7c54dbca180060e9603779 2024-01-30T21:11:32,945 Successfully built xi-mzidentml-converter 2024-01-30T21:11:32,950 Removed build tracker: '/tmp/pip-build-tracker-qchtc3vp'