2024-02-01T16:05:00,057 Created temporary directory: /tmp/pip-build-tracker-swrw09v5 2024-02-01T16:05:00,059 Initialized build tracking at /tmp/pip-build-tracker-swrw09v5 2024-02-01T16:05:00,059 Created build tracker: /tmp/pip-build-tracker-swrw09v5 2024-02-01T16:05:00,060 Entered build tracker: /tmp/pip-build-tracker-swrw09v5 2024-02-01T16:05:00,060 Created temporary directory: /tmp/pip-wheel-ytn_ewov 2024-02-01T16:05:00,064 Created temporary directory: /tmp/pip-ephem-wheel-cache-2gqot58f 2024-02-01T16:05:00,087 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-01T16:05:00,090 2 location(s) to search for versions of biomero: 2024-02-01T16:05:00,090 * https://pypi.org/simple/biomero/ 2024-02-01T16:05:00,090 * https://www.piwheels.org/simple/biomero/ 2024-02-01T16:05:00,091 Fetching project page and analyzing links: https://pypi.org/simple/biomero/ 2024-02-01T16:05:00,092 Getting page https://pypi.org/simple/biomero/ 2024-02-01T16:05:00,093 Found index url https://pypi.org/simple/ 2024-02-01T16:05:00,322 Fetched page https://pypi.org/simple/biomero/ as application/vnd.pypi.simple.v1+json 2024-02-01T16:05:00,324 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/62/48/c77a7d502ed23e824988527ffe744d77ec3692bf373f5dffb6406149f55e/biomero-1.2.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-02-01T16:05:00,325 Found link https://files.pythonhosted.org/packages/37/4b/4934e30b8ac7f859e20ce2f33ebb9d9de0c2611fd419587e840b457da994/biomero-1.2.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.2.0 2024-02-01T16:05:00,325 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ba/59/df01007bae6d10f7a894eb8f067b19a6fc1c85cef3621532c552c8a5d83c/biomero-1.3.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-02-01T16:05:00,326 Found link https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.3.0 2024-02-01T16:05:00,327 Fetching project page and analyzing links: https://www.piwheels.org/simple/biomero/ 2024-02-01T16:05:00,328 Getting page https://www.piwheels.org/simple/biomero/ 2024-02-01T16:05:00,329 Found index url https://www.piwheels.org/simple/ 2024-02-01T16:05:00,496 Fetched page https://www.piwheels.org/simple/biomero/ as text/html 2024-02-01T16:05:00,497 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.2.0-py3-none-any.whl#sha256=0a3d446aaed8e43c191ec7b78fd1731e91935fd1e432bde72a96689be19f8dbf (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-02-01T16:05:00,498 Skipping link: not a file: https://www.piwheels.org/simple/biomero/ 2024-02-01T16:05:00,499 Skipping link: not a file: https://pypi.org/simple/biomero/ 2024-02-01T16:05:00,517 Given no hashes to check 1 links for project 'biomero': discarding no candidates 2024-02-01T16:05:00,535 Collecting biomero==1.3.0 2024-02-01T16:05:00,537 Created temporary directory: /tmp/pip-unpack-1uk7aqp9 2024-02-01T16:05:00,748 Downloading biomero-1.3.0.tar.gz (1.1 MB) 2024-02-01T16:05:01,081 Added biomero==1.3.0 from https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-swrw09v5' 2024-02-01T16:05:01,087 Created temporary directory: /tmp/pip-build-env-4isyw12x 2024-02-01T16:05:01,092 Installing build dependencies: started 2024-02-01T16:05:01,093 Running command pip subprocess to install build dependencies 2024-02-01T16:05:02,506 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-01T16:05:03,016 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-01T16:05:04,460 Collecting setuptools>=45 2024-02-01T16:05:04,474 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl (819 kB) 2024-02-01T16:05:04,787 Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2) 2024-02-01T16:05:04,800 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2024-02-01T16:05:05,135 Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-02-01T16:05:05,148 Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB) 2024-02-01T16:05:05,256 Collecting typing-extensions (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-02-01T16:05:05,269 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.9.0-py3-none-any.whl (32 kB) 2024-02-01T16:05:07,794 Installing collected packages: typing-extensions, setuptools, packaging, setuptools_scm 2024-02-01T16:05:10,424 Successfully installed packaging-23.2 setuptools-69.0.3 setuptools_scm-8.0.4 typing-extensions-4.9.0 2024-02-01T16:05:10,696 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-02-01T16:05:10,697 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-01T16:05:10,980 Installing build dependencies: finished with status 'done' 2024-02-01T16:05:10,983 Getting requirements to build wheel: started 2024-02-01T16:05:10,984 Running command Getting requirements to build wheel 2024-02-01T16:05:11,820 running egg_info 2024-02-01T16:05:11,825 writing biomero.egg-info/PKG-INFO 2024-02-01T16:05:11,831 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-02-01T16:05:11,833 writing requirements to biomero.egg-info/requires.txt 2024-02-01T16:05:11,834 writing top-level names to biomero.egg-info/top_level.txt 2024-02-01T16:05:11,876 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-02-01T16:05:11,879 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-02-01T16:05:11,882 reading manifest template 'MANIFEST.in' 2024-02-01T16:05:11,890 adding license file 'LICENSE' 2024-02-01T16:05:11,894 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-02-01T16:05:12,013 Getting requirements to build wheel: finished with status 'done' 2024-02-01T16:05:12,024 Installing backend dependencies: started 2024-02-01T16:05:12,025 Running command pip subprocess to install backend dependencies 2024-02-01T16:05:13,147 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-01T16:05:13,656 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-01T16:05:14,143 Collecting wheel 2024-02-01T16:05:14,171 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-02-01T16:05:16,397 Installing collected packages: wheel 2024-02-01T16:05:16,618 Creating /tmp/pip-build-env-4isyw12x/normal/local/bin 2024-02-01T16:05:16,620 changing mode of /tmp/pip-build-env-4isyw12x/normal/local/bin/wheel to 755 2024-02-01T16:05:16,631 Successfully installed wheel-0.42.0 2024-02-01T16:05:16,902 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-02-01T16:05:16,903 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-01T16:05:17,132 Installing backend dependencies: finished with status 'done' 2024-02-01T16:05:17,134 Created temporary directory: /tmp/pip-modern-metadata-khw_dbtf 2024-02-01T16:05:17,137 Preparing metadata (pyproject.toml): started 2024-02-01T16:05:17,138 Running command Preparing metadata (pyproject.toml) 2024-02-01T16:05:18,004 running dist_info 2024-02-01T16:05:18,009 creating /tmp/pip-modern-metadata-khw_dbtf/biomero.egg-info 2024-02-01T16:05:18,015 writing /tmp/pip-modern-metadata-khw_dbtf/biomero.egg-info/PKG-INFO 2024-02-01T16:05:18,020 writing dependency_links to /tmp/pip-modern-metadata-khw_dbtf/biomero.egg-info/dependency_links.txt 2024-02-01T16:05:18,022 writing requirements to /tmp/pip-modern-metadata-khw_dbtf/biomero.egg-info/requires.txt 2024-02-01T16:05:18,024 writing top-level names to /tmp/pip-modern-metadata-khw_dbtf/biomero.egg-info/top_level.txt 2024-02-01T16:05:18,025 writing manifest file '/tmp/pip-modern-metadata-khw_dbtf/biomero.egg-info/SOURCES.txt' 2024-02-01T16:05:18,066 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-02-01T16:05:18,069 reading manifest file '/tmp/pip-modern-metadata-khw_dbtf/biomero.egg-info/SOURCES.txt' 2024-02-01T16:05:18,071 reading manifest template 'MANIFEST.in' 2024-02-01T16:05:18,080 adding license file 'LICENSE' 2024-02-01T16:05:18,082 writing manifest file '/tmp/pip-modern-metadata-khw_dbtf/biomero.egg-info/SOURCES.txt' 2024-02-01T16:05:18,083 creating '/tmp/pip-modern-metadata-khw_dbtf/biomero-1.3.0.dist-info' 2024-02-01T16:05:18,245 Preparing metadata (pyproject.toml): finished with status 'done' 2024-02-01T16:05:18,252 Source in /tmp/pip-wheel-ytn_ewov/biomero_3a8f2b642892498b97da875d1fea9721 has version 1.3.0, which satisfies requirement biomero==1.3.0 from https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz 2024-02-01T16:05:18,254 Removed biomero==1.3.0 from https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-swrw09v5' 2024-02-01T16:05:18,266 Created temporary directory: /tmp/pip-unpack-4_9cy9cf 2024-02-01T16:05:18,267 Created temporary directory: /tmp/pip-unpack-rgt1_88s 2024-02-01T16:05:18,287 Building wheels for collected packages: biomero 2024-02-01T16:05:18,291 Created temporary directory: /tmp/pip-wheel-dz3skl61 2024-02-01T16:05:18,292 Destination directory: /tmp/pip-wheel-dz3skl61 2024-02-01T16:05:18,294 Building wheel for biomero (pyproject.toml): started 2024-02-01T16:05:18,295 Running command Building wheel for biomero (pyproject.toml) 2024-02-01T16:05:19,118 running bdist_wheel 2024-02-01T16:05:19,140 running build 2024-02-01T16:05:19,141 running build_py 2024-02-01T16:05:19,147 creating build 2024-02-01T16:05:19,148 creating build/lib 2024-02-01T16:05:19,149 creating build/lib/docs 2024-02-01T16:05:19,150 copying docs/conf.py -> build/lib/docs 2024-02-01T16:05:19,153 creating build/lib/resources 2024-02-01T16:05:19,154 copying resources/convert_zarr_to_tiff.py -> build/lib/resources 2024-02-01T16:05:19,156 copying resources/__init__.py -> build/lib/resources 2024-02-01T16:05:19,157 creating build/lib/biomero 2024-02-01T16:05:19,158 copying biomero/constants.py -> build/lib/biomero 2024-02-01T16:05:19,160 copying biomero/slurm_client.py -> build/lib/biomero 2024-02-01T16:05:19,164 copying biomero/__init__.py -> build/lib/biomero 2024-02-01T16:05:19,166 creating build/lib/tests 2024-02-01T16:05:19,166 creating build/lib/tests/integration 2024-02-01T16:05:19,167 copying tests/integration/__init__.py -> build/lib/tests/integration 2024-02-01T16:05:19,169 creating build/lib/tests/unit 2024-02-01T16:05:19,170 copying tests/unit/test_slurm_client.py -> build/lib/tests/unit 2024-02-01T16:05:19,173 copying tests/unit/__init__.py -> build/lib/tests/unit 2024-02-01T16:05:19,175 running egg_info 2024-02-01T16:05:19,180 writing biomero.egg-info/PKG-INFO 2024-02-01T16:05:19,185 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-02-01T16:05:19,186 writing requirements to biomero.egg-info/requires.txt 2024-02-01T16:05:19,187 writing top-level names to biomero.egg-info/top_level.txt 2024-02-01T16:05:19,217 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-02-01T16:05:19,220 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-02-01T16:05:19,224 reading manifest template 'MANIFEST.in' 2024-02-01T16:05:19,232 adding license file 'LICENSE' 2024-02-01T16:05:19,235 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-02-01T16:05:19,242 copying docs/Makefile -> build/lib/docs 2024-02-01T16:05:19,244 copying docs/index.rst -> build/lib/docs 2024-02-01T16:05:19,246 copying docs/make.bat -> build/lib/docs 2024-02-01T16:05:19,248 copying docs/modules.rst -> build/lib/docs 2024-02-01T16:05:19,249 copying docs/omero_slurm_client.rst -> build/lib/docs 2024-02-01T16:05:19,251 copying docs/readme_link.md -> build/lib/docs 2024-02-01T16:05:19,253 copying docs/requirements.txt -> build/lib/docs 2024-02-01T16:05:19,255 copying docs/tutorial_link.md -> build/lib/docs 2024-02-01T16:05:19,257 copying resources/convert_job_array.sh -> build/lib/resources 2024-02-01T16:05:19,259 copying resources/convert_zarr_to_tiff.def -> build/lib/resources 2024-02-01T16:05:19,260 copying resources/example.config -> build/lib/resources 2024-02-01T16:05:19,262 copying resources/job_template.sh -> build/lib/resources 2024-02-01T16:05:19,264 copying resources/pull_images.sh -> build/lib/resources 2024-02-01T16:05:19,266 copying resources/slurm-config.ini -> build/lib/resources 2024-02-01T16:05:19,268 creating build/lib/resources/tutorials 2024-02-01T16:05:19,269 copying resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/lib/resources/tutorials 2024-02-01T16:05:19,272 copying resources/tutorials/tutorial_cellexpansion.md -> build/lib/resources/tutorials 2024-02-01T16:05:19,274 copying resources/tutorials/tutorial_cellprofiler.md -> build/lib/resources/tutorials 2024-02-01T16:05:19,277 copying resources/tutorials/tutorial_local_slurm.md -> build/lib/resources/tutorials 2024-02-01T16:05:19,280 creating build/lib/resources/tutorials/images 2024-02-01T16:05:19,281 copying resources/tutorials/images/Cells.tif -> build/lib/resources/tutorials/images 2024-02-01T16:05:19,287 copying resources/tutorials/images/cellexpansion.png -> build/lib/resources/tutorials/images 2024-02-01T16:05:19,296 copying resources/tutorials/images/gc_allow_ssh.PNG -> build/lib/resources/tutorials/images 2024-02-01T16:05:19,300 copying resources/tutorials/images/nuclei_labels.png -> build/lib/resources/tutorials/images 2024-02-01T16:05:19,307 copying resources/tutorials/images/webclient_init_env.PNG -> build/lib/resources/tutorials/images 2024-02-01T16:05:19,310 copying resources/tutorials/images/webclient_init_env_done.PNG -> build/lib/resources/tutorials/images 2024-02-01T16:05:19,313 copying resources/tutorials/images/webclient_run_cellpose.PNG -> build/lib/resources/tutorials/images 2024-02-01T16:05:19,316 copying resources/tutorials/images/webclient_run_workflow.PNG -> build/lib/resources/tutorials/images 2024-02-01T16:05:19,330 installing to build/bdist.linux-armv7l/wheel 2024-02-01T16:05:19,331 running install 2024-02-01T16:05:19,356 running install_lib 2024-02-01T16:05:19,361 creating build/bdist.linux-armv7l 2024-02-01T16:05:19,362 creating build/bdist.linux-armv7l/wheel 2024-02-01T16:05:19,364 creating build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,365 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,368 copying build/lib/docs/modules.rst -> build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,370 copying build/lib/docs/requirements.txt -> build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,372 copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,374 copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,376 copying build/lib/docs/readme_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,378 copying build/lib/docs/omero_slurm_client.rst -> build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,380 copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,382 copying build/lib/docs/tutorial_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-02-01T16:05:19,385 creating build/bdist.linux-armv7l/wheel/tests 2024-02-01T16:05:19,387 creating build/bdist.linux-armv7l/wheel/tests/integration 2024-02-01T16:05:19,388 copying build/lib/tests/integration/__init__.py -> build/bdist.linux-armv7l/wheel/tests/integration 2024-02-01T16:05:19,391 creating build/bdist.linux-armv7l/wheel/tests/unit 2024-02-01T16:05:19,392 copying build/lib/tests/unit/test_slurm_client.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-02-01T16:05:19,395 copying build/lib/tests/unit/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-02-01T16:05:19,398 creating build/bdist.linux-armv7l/wheel/resources 2024-02-01T16:05:19,399 copying build/lib/resources/convert_zarr_to_tiff.py -> build/bdist.linux-armv7l/wheel/resources 2024-02-01T16:05:19,401 copying build/lib/resources/job_template.sh -> build/bdist.linux-armv7l/wheel/resources 2024-02-01T16:05:19,403 copying build/lib/resources/slurm-config.ini -> build/bdist.linux-armv7l/wheel/resources 2024-02-01T16:05:19,406 copying build/lib/resources/convert_zarr_to_tiff.def -> build/bdist.linux-armv7l/wheel/resources 2024-02-01T16:05:19,408 copying build/lib/resources/example.config -> build/bdist.linux-armv7l/wheel/resources 2024-02-01T16:05:19,409 copying build/lib/resources/pull_images.sh -> build/bdist.linux-armv7l/wheel/resources 2024-02-01T16:05:19,411 copying build/lib/resources/convert_job_array.sh -> build/bdist.linux-armv7l/wheel/resources 2024-02-01T16:05:19,413 copying build/lib/resources/__init__.py -> build/bdist.linux-armv7l/wheel/resources 2024-02-01T16:05:19,415 creating build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-01T16:05:19,417 creating build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-01T16:05:19,418 copying build/lib/resources/tutorials/images/webclient_init_env.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-01T16:05:19,421 copying build/lib/resources/tutorials/images/Cells.tif -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-01T16:05:19,432 copying build/lib/resources/tutorials/images/gc_allow_ssh.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-01T16:05:19,436 copying build/lib/resources/tutorials/images/webclient_run_cellpose.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-01T16:05:19,439 copying build/lib/resources/tutorials/images/webclient_run_workflow.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-01T16:05:19,442 copying build/lib/resources/tutorials/images/nuclei_labels.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-01T16:05:19,449 copying build/lib/resources/tutorials/images/webclient_init_env_done.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-01T16:05:19,451 copying build/lib/resources/tutorials/images/cellexpansion.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-01T16:05:19,461 copying build/lib/resources/tutorials/tutorial_cellexpansion.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-01T16:05:19,464 copying build/lib/resources/tutorials/tutorial_cellprofiler.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-01T16:05:19,467 copying build/lib/resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-01T16:05:19,469 copying build/lib/resources/tutorials/tutorial_local_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-01T16:05:19,473 creating build/bdist.linux-armv7l/wheel/biomero 2024-02-01T16:05:19,474 copying build/lib/biomero/constants.py -> build/bdist.linux-armv7l/wheel/biomero 2024-02-01T16:05:19,476 copying build/lib/biomero/slurm_client.py -> build/bdist.linux-armv7l/wheel/biomero 2024-02-01T16:05:19,480 copying build/lib/biomero/__init__.py -> build/bdist.linux-armv7l/wheel/biomero 2024-02-01T16:05:19,482 running install_egg_info 2024-02-01T16:05:19,487 Copying biomero.egg-info to build/bdist.linux-armv7l/wheel/biomero-1.3.0-py3.11.egg-info 2024-02-01T16:05:19,498 running install_scripts 2024-02-01T16:05:19,517 creating build/bdist.linux-armv7l/wheel/biomero-1.3.0.dist-info/WHEEL 2024-02-01T16:05:19,520 creating '/tmp/pip-wheel-dz3skl61/.tmp-zivpeo03/biomero-1.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-01T16:05:19,522 adding 'biomero/__init__.py' 2024-02-01T16:05:19,524 adding 'biomero/constants.py' 2024-02-01T16:05:19,532 adding 'biomero/slurm_client.py' 2024-02-01T16:05:19,536 adding 'docs/Makefile' 2024-02-01T16:05:19,538 adding 'docs/conf.py' 2024-02-01T16:05:19,539 adding 'docs/index.rst' 2024-02-01T16:05:19,541 adding 'docs/make.bat' 2024-02-01T16:05:19,543 adding 'docs/modules.rst' 2024-02-01T16:05:19,544 adding 'docs/omero_slurm_client.rst' 2024-02-01T16:05:19,546 adding 'docs/readme_link.md' 2024-02-01T16:05:19,547 adding 'docs/requirements.txt' 2024-02-01T16:05:19,548 adding 'docs/tutorial_link.md' 2024-02-01T16:05:19,551 adding 'resources/__init__.py' 2024-02-01T16:05:19,552 adding 'resources/convert_job_array.sh' 2024-02-01T16:05:19,554 adding 'resources/convert_zarr_to_tiff.def' 2024-02-01T16:05:19,555 adding 'resources/convert_zarr_to_tiff.py' 2024-02-01T16:05:19,557 adding 'resources/example.config' 2024-02-01T16:05:19,559 adding 'resources/job_template.sh' 2024-02-01T16:05:19,560 adding 'resources/pull_images.sh' 2024-02-01T16:05:19,562 adding 'resources/slurm-config.ini' 2024-02-01T16:05:19,566 adding 'resources/tutorials/tutorial_GoogleCloud_slurm.md' 2024-02-01T16:05:19,568 adding 'resources/tutorials/tutorial_cellexpansion.md' 2024-02-01T16:05:19,571 adding 'resources/tutorials/tutorial_cellprofiler.md' 2024-02-01T16:05:19,575 adding 'resources/tutorials/tutorial_local_slurm.md' 2024-02-01T16:05:19,616 adding 'resources/tutorials/images/Cells.tif' 2024-02-01T16:05:19,654 adding 'resources/tutorials/images/cellexpansion.png' 2024-02-01T16:05:19,667 adding 'resources/tutorials/images/gc_allow_ssh.PNG' 2024-02-01T16:05:19,690 adding 'resources/tutorials/images/nuclei_labels.png' 2024-02-01T16:05:19,694 adding 'resources/tutorials/images/webclient_init_env.PNG' 2024-02-01T16:05:19,697 adding 'resources/tutorials/images/webclient_init_env_done.PNG' 2024-02-01T16:05:19,702 adding 'resources/tutorials/images/webclient_run_cellpose.PNG' 2024-02-01T16:05:19,708 adding 'resources/tutorials/images/webclient_run_workflow.PNG' 2024-02-01T16:05:19,711 adding 'tests/integration/__init__.py' 2024-02-01T16:05:19,713 adding 'tests/unit/__init__.py' 2024-02-01T16:05:19,717 adding 'tests/unit/test_slurm_client.py' 2024-02-01T16:05:19,720 adding 'biomero-1.3.0.dist-info/LICENSE' 2024-02-01T16:05:19,727 adding 'biomero-1.3.0.dist-info/METADATA' 2024-02-01T16:05:19,729 adding 'biomero-1.3.0.dist-info/WHEEL' 2024-02-01T16:05:19,730 adding 'biomero-1.3.0.dist-info/top_level.txt' 2024-02-01T16:05:19,732 adding 'biomero-1.3.0.dist-info/RECORD' 2024-02-01T16:05:19,749 removing build/bdist.linux-armv7l/wheel 2024-02-01T16:05:19,886 Building wheel for biomero (pyproject.toml): finished with status 'done' 2024-02-01T16:05:19,912 Created wheel for biomero: filename=biomero-1.3.0-py3-none-any.whl size=1078746 sha256=e87fb4e5b3565cfa3b27830d8d1d1bff5c1054bfb032d2e6055e966ef84df39d 2024-02-01T16:05:19,913 Stored in directory: /tmp/pip-ephem-wheel-cache-2gqot58f/wheels/fe/2f/c6/6b4a26523b23bb0e83516d5a335b055fe51e4ec6e4d61b3d5e 2024-02-01T16:05:19,937 Successfully built biomero 2024-02-01T16:05:19,964 Removed build tracker: '/tmp/pip-build-tracker-swrw09v5'