2024-02-06T15:27:15,083 Created temporary directory: /tmp/pip-build-tracker-ijf33hf0
2024-02-06T15:27:15,086 Initialized build tracking at /tmp/pip-build-tracker-ijf33hf0
2024-02-06T15:27:15,087 Created build tracker: /tmp/pip-build-tracker-ijf33hf0
2024-02-06T15:27:15,087 Entered build tracker: /tmp/pip-build-tracker-ijf33hf0
2024-02-06T15:27:15,088 Created temporary directory: /tmp/pip-wheel-4skbpdk4
2024-02-06T15:27:15,099 Created temporary directory: /tmp/pip-ephem-wheel-cache-rwsyvxgk
2024-02-06T15:27:15,153 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-02-06T15:27:15,167 2 location(s) to search for versions of bioen:
2024-02-06T15:27:15,167 * https://pypi.org/simple/bioen/
2024-02-06T15:27:15,167 * https://www.piwheels.org/simple/bioen/
2024-02-06T15:27:15,168 Fetching project page and analyzing links: https://pypi.org/simple/bioen/
2024-02-06T15:27:15,170 Getting page https://pypi.org/simple/bioen/
2024-02-06T15:27:15,174 Found index url https://pypi.org/simple/
2024-02-06T15:27:15,285 Fetched page https://pypi.org/simple/bioen/ as application/vnd.pypi.simple.v1+json
2024-02-06T15:27:15,293   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/e8/72/d84e7a1948bb08b25c83c740546027d27b3daa601bc4eb471aed6e6d99c6/bioen-0.1.2-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,294   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/65/24/a8ff33f261d69c5ca8b39f13b31076c1976a995fdb3f443d03672f993258/bioen-0.1.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,294   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/15/37/7c6d0827cefd20315d03ce77f1c1f70fb28caa993ca3bc4aa3b5b77e4c67/bioen-0.1.2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,295   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/d4/d6/5e6c5ec45b33ee1174d6442ea65f0bf94af29d6121f1cc1d84242bbd8fde/bioen-0.1.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,295   Found link https://files.pythonhosted.org/packages/7a/f9/8c82f09b480376a64815fac6482104760ec7c29af14c064cfaa365c433d5/bioen-0.1.2.tar.gz (from https://pypi.org/simple/bioen/), version: 0.1.2
2024-02-06T15:27:15,296   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/28/5c/a6fc89094a37b9bd3097847ab0e228def42e32aada8096f8a9478c34fcf1/bioen-0.1.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,297   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/67/0b/76663e23d81a98d85cb6a4b9d5d676cc7e3ddde3621c3c31452935381834/bioen-0.1.3-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,297   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/86/a6/7971df1b5697261f947f99342cd713d7c457c84356c6ffbb12fe8ba89007/bioen-0.1.3-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,298   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/8b/ba/ded1f84f2bb2162ba56f4809864e4718890b0004df0d14b4d0683877638a/bioen-0.1.3-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,298   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/d5/6c/f9a76168b860d753e3f7ebd2665db4a418c91f22ca60c0a6ebfb6b06c5cf/bioen-0.1.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,299   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/ef/87/b076765647bde5c15e9cff765fd412a9bbb0f2a6e21bef3c589767da44a6/bioen-0.1.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,299   Skipping link: No binaries permitted for bioen: https://files.pythonhosted.org/packages/ae/26/385ccb4b73bf6362e571e549a9e65fe205426c79f15bc2de3d3663901a58/bioen-0.1.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/bioen/)
2024-02-06T15:27:15,300   Found link https://files.pythonhosted.org/packages/7b/74/15dc29e3d9f4e6a5ebc47903f7214c838be99925f3d49720914489130a45/bioen-0.1.3.tar.gz (from https://pypi.org/simple/bioen/), version: 0.1.3
2024-02-06T15:27:15,301 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioen/
2024-02-06T15:27:15,301 Getting page https://www.piwheels.org/simple/bioen/
2024-02-06T15:27:15,304 Found index url https://www.piwheels.org/simple/
2024-02-06T15:27:15,427 Fetched page https://www.piwheels.org/simple/bioen/ as text/html
2024-02-06T15:27:15,429 Skipping link: not a file: https://www.piwheels.org/simple/bioen/
2024-02-06T15:27:15,429 Skipping link: not a file: https://pypi.org/simple/bioen/
2024-02-06T15:27:15,462 Given no hashes to check 1 links for project 'bioen': discarding no candidates
2024-02-06T15:27:15,493 Collecting bioen==0.1.3
2024-02-06T15:27:15,498   Created temporary directory: /tmp/pip-unpack-cbyuae8c
2024-02-06T15:27:15,596   Downloading bioen-0.1.3.tar.gz (5.8 MB)
2024-02-06T15:27:18,991   Added bioen==0.1.3 from https://files.pythonhosted.org/packages/7b/74/15dc29e3d9f4e6a5ebc47903f7214c838be99925f3d49720914489130a45/bioen-0.1.3.tar.gz to build tracker '/tmp/pip-build-tracker-ijf33hf0'
2024-02-06T15:27:18,994   Running setup.py (path:/tmp/pip-wheel-4skbpdk4/bioen_5ec1511b05ae4bb2abc23e411e4c31d1/setup.py) egg_info for package bioen
2024-02-06T15:27:18,995   Created temporary directory: /tmp/pip-pip-egg-info-yqy3duda
2024-02-06T15:27:18,996   Preparing metadata (setup.py): started
2024-02-06T15:27:18,998   Running command python setup.py egg_info
2024-02-06T15:27:20,758   Traceback (most recent call last):
2024-02-06T15:27:20,760     File "<string>", line 36, in <module>
2024-02-06T15:27:20,760     File "<pip-setuptools-caller>", line 34, in <module>
2024-02-06T15:27:20,760     File "/tmp/pip-wheel-4skbpdk4/bioen_5ec1511b05ae4bb2abc23e411e4c31d1/setup.py", line 253, in <module>
2024-02-06T15:27:20,761       reqs = [l.strip() for l in open(BIOEN_REQUIREMENTS_TXT).readlines()]
2024-02-06T15:27:20,761   FileNotFoundError: [Errno 2] No such file or directory: 'requirements.txt'
2024-02-06T15:27:20,762   Warning: liblbfgs is not used!
2024-02-06T15:27:20,763   ---
2024-02-06T15:27:20,763   bioen v0.1.3
2024-02-06T15:27:20,764   BIOEN_OPENMP : False
2024-02-06T15:27:20,764   BIOEN_FAST_CFLAGS : True
2024-02-06T15:27:20,764   CFLAGS : ['-O3', '-fPIC', '-Wno-unknown-pragmas', '-march=native', '-std=gnu99', '-DENABLE_GSL']
2024-02-06T15:27:20,765   LDFLAGS : ['-lm', '-lgsl', '-lgslcblas']
2024-02-06T15:27:20,765   RPATH : True
2024-02-06T15:27:20,766   ---
2024-02-06T15:27:20,917   ERROR: python setup.py egg_info exited with 1
2024-02-06T15:27:20,961   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2024-02-06T15:27:20,961   exec(compile('"'"''"'"''"'"'
2024-02-06T15:27:20,961   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2024-02-06T15:27:20,961   #
2024-02-06T15:27:20,961   # - It imports setuptools before invoking setup.py, to enable projects that directly
2024-02-06T15:27:20,961   #   import from `distutils.core` to work with newer packaging standards.
2024-02-06T15:27:20,961   # - It provides a clear error message when setuptools is not installed.
2024-02-06T15:27:20,961   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2024-02-06T15:27:20,961   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2024-02-06T15:27:20,961   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2024-02-06T15:27:20,961   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2024-02-06T15:27:20,961   import os, sys, tokenize
2024-02-06T15:27:20,961   
2024-02-06T15:27:20,961   try:
2024-02-06T15:27:20,961       import setuptools
2024-02-06T15:27:20,961   except ImportError as error:
2024-02-06T15:27:20,961       print(
2024-02-06T15:27:20,961           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2024-02-06T15:27:20,961           "the build environment.",
2024-02-06T15:27:20,961           file=sys.stderr,
2024-02-06T15:27:20,961       )
2024-02-06T15:27:20,961       sys.exit(1)
2024-02-06T15:27:20,961   
2024-02-06T15:27:20,961   __file__ = %r
2024-02-06T15:27:20,961   sys.argv[0] = __file__
2024-02-06T15:27:20,961   
2024-02-06T15:27:20,961   if os.path.exists(__file__):
2024-02-06T15:27:20,961       filename = __file__
2024-02-06T15:27:20,961       with tokenize.open(__file__) as f:
2024-02-06T15:27:20,961           setup_py_code = f.read()
2024-02-06T15:27:20,961   else:
2024-02-06T15:27:20,961       filename = "<auto-generated setuptools caller>"
2024-02-06T15:27:20,961       setup_py_code = "from setuptools import setup; setup()"
2024-02-06T15:27:20,961   
2024-02-06T15:27:20,961   exec(compile(setup_py_code, filename, "exec"))
2024-02-06T15:27:20,961   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-4skbpdk4/bioen_5ec1511b05ae4bb2abc23e411e4c31d1/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-yqy3duda[/]
2024-02-06T15:27:20,961   [bold magenta]cwd[/]: /tmp/pip-wheel-4skbpdk4/bioen_5ec1511b05ae4bb2abc23e411e4c31d1/
2024-02-06T15:27:20,962   Preparing metadata (setup.py): finished with status 'error'
2024-02-06T15:27:20,965 ERROR: metadata generation failed
2024-02-06T15:27:20,979 Exception information:
2024-02-06T15:27:20,979 Traceback (most recent call last):
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/operations/build/metadata_legacy.py", line 68, in generate_metadata
2024-02-06T15:27:20,979     spinner=spinner,
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2024-02-06T15:27:20,979     raise error
2024-02-06T15:27:20,979 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2024-02-06T15:27:20,979 
2024-02-06T15:27:20,979 The above exception was the direct cause of the following exception:
2024-02-06T15:27:20,979 
2024-02-06T15:27:20,979 Traceback (most recent call last):
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2024-02-06T15:27:20,979     status = run_func(*args)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/cli/req_command.py", line 245, in wrapper
2024-02-06T15:27:20,979     return func(self, options, args)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/commands/wheel.py", line 147, in run
2024-02-06T15:27:20,979     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 96, in resolve
2024-02-06T15:27:20,979     collected.requirements, max_rounds=limit_how_complex_resolution_can_be
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2024-02-06T15:27:20,979     state = resolution.resolve(requirements, max_rounds=max_rounds)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2024-02-06T15:27:20,979     self._add_to_criteria(self.state.criteria, r, parent=None)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2024-02-06T15:27:20,979     if not criterion.candidates:
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2024-02-06T15:27:20,979     return bool(self._sequence)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2024-02-06T15:27:20,979     return any(self)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2024-02-06T15:27:20,979     return (c for c in iterator if id(c) not in self._incompatible_ids)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2024-02-06T15:27:20,979     candidate = func()
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 216, in _make_candidate_from_link
2024-02-06T15:27:20,979     version=version,
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 299, in __init__
2024-02-06T15:27:20,979     version=version,
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2024-02-06T15:27:20,979     self.dist = self._prepare()
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2024-02-06T15:27:20,979     dist = self._prepare_distribution()
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2024-02-06T15:27:20,979     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/operations/prepare.py", line 525, in prepare_linked_requirement
2024-02-06T15:27:20,979     return self._prepare_linked_requirement(req, parallel_builds)
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/operations/prepare.py", line 645, in _prepare_linked_requirement
2024-02-06T15:27:20,979     self.check_build_deps,
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/operations/prepare.py", line 72, in _get_prepared_distribution
2024-02-06T15:27:20,979     finder, build_isolation, check_build_deps
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/distributions/sdist.py", line 67, in prepare_distribution_metadata
2024-02-06T15:27:20,979     self.req.prepare_metadata()
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/req/req_install.py", line 588, in prepare_metadata
2024-02-06T15:27:20,979     details=details,
2024-02-06T15:27:20,979   File "/home/piwheels/.local/lib/python3.7/site-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2024-02-06T15:27:20,979     raise MetadataGenerationFailed(package_details=details) from error
2024-02-06T15:27:20,979 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2024-02-06T15:27:21,003 Removed bioen==0.1.3 from https://files.pythonhosted.org/packages/7b/74/15dc29e3d9f4e6a5ebc47903f7214c838be99925f3d49720914489130a45/bioen-0.1.3.tar.gz from build tracker '/tmp/pip-build-tracker-ijf33hf0'
2024-02-06T15:27:21,004 Removed build tracker: '/tmp/pip-build-tracker-ijf33hf0'